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Class: Activity

click EnabledByAssociation href "../EnabledByAssociation" - Activity : has_direct_input + Activity : has_input - Activity --> "0..1" MoleculeAssociation : has_direct_input + Activity --> "*" MoleculeAssociation : has_input + click MoleculeAssociation href "../MoleculeAssociation" + + + Activity : has_output + + + + + Activity --> "*" MoleculeAssociation : has_output + click MoleculeAssociation href "../MoleculeAssociation" + + + Activity : has_primary_input + + + + + Activity --> "0..1" MoleculeAssociation : has_primary_input + click MoleculeAssociation href "../MoleculeAssociation" + + + Activity : has_primary_output + + + + + Activity --> "0..1" MoleculeAssociation : has_primary_output click MoleculeAssociation href "../MoleculeAssociation" @@ -320,12 +347,30 @@

Slots

direct -has_direct_input -0..1
MoleculeAssociation +has_input +*
MoleculeAssociation The input molecules that are directly consumed by the activity direct +has_primary_input +0..1
MoleculeAssociation +The primary input molecule that is directly consumed by the activity +direct + + +has_output +*
MoleculeAssociation +The output molecules that are directly produced by the activity +direct + + +has_primary_output +0..1
MoleculeAssociation +The primary output molecule that is directly produced by the activity +direct + + causal_associations *
CausalAssociation The causal associations that connect this activity to other activities @@ -457,11 +502,42 @@

Direct

- Activity range: BiologicalProcessAssociation inlined: true - has_direct_input: - name: has_direct_input + has_input: + name: has_input description: The input molecules that are directly consumed by the activity from_schema: https://w3id.org/gocam rank: 1000 + multivalued: true + domain_of: + - Activity + range: MoleculeAssociation + inlined: true + inlined_as_list: true + has_primary_input: + name: has_primary_input + description: The primary input molecule that is directly consumed by the activity + from_schema: https://w3id.org/gocam + rank: 1000 + domain_of: + - Activity + range: MoleculeAssociation + inlined: true + has_output: + name: has_output + description: The output molecules that are directly produced by the activity + from_schema: https://w3id.org/gocam + rank: 1000 + multivalued: true + domain_of: + - Activity + range: MoleculeAssociation + inlined: true + inlined_as_list: true + has_primary_output: + name: has_primary_output + description: The primary output molecule that is directly produced by the activity + from_schema: https://w3id.org/gocam + rank: 1000 domain_of: - Activity range: MoleculeAssociation @@ -566,12 +642,49 @@

Induced

- Activity range: BiologicalProcessAssociation inlined: true - has_direct_input: - name: has_direct_input + has_input: + name: has_input description: The input molecules that are directly consumed by the activity from_schema: https://w3id.org/gocam rank: 1000 - alias: has_direct_input + multivalued: true + alias: has_input + owner: Activity + domain_of: + - Activity + range: MoleculeAssociation + inlined: true + inlined_as_list: true + has_primary_input: + name: has_primary_input + description: The primary input molecule that is directly consumed by the activity + from_schema: https://w3id.org/gocam + rank: 1000 + alias: has_primary_input + owner: Activity + domain_of: + - Activity + range: MoleculeAssociation + inlined: true + has_output: + name: has_output + description: The output molecules that are directly produced by the activity + from_schema: https://w3id.org/gocam + rank: 1000 + multivalued: true + alias: has_output + owner: Activity + domain_of: + - Activity + range: MoleculeAssociation + inlined: true + inlined_as_list: true + has_primary_output: + name: has_primary_output + description: The primary output molecule that is directly produced by the activity + from_schema: https://w3id.org/gocam + rank: 1000 + alias: has_primary_output owner: Activity domain_of: - Activity diff --git a/MoleculeAssociation/index.html b/MoleculeAssociation/index.html index dc20e8a..e7306d6 100644 --- a/MoleculeAssociation/index.html +++ b/MoleculeAssociation/index.html @@ -304,7 +304,25 @@

Usages

Activity -has_direct_input +has_input +range +MoleculeAssociation + + +Activity +has_primary_input +range +MoleculeAssociation + + +Activity +has_output +range +MoleculeAssociation + + +Activity +has_primary_output range MoleculeAssociation diff --git a/evidence/index.html b/evidence/index.html index a024ebb..89a31b3 100644 --- a/evidence/index.html +++ b/evidence/index.html @@ -331,8 +331,13 @@

Applicable Classes

-Association -An abstract grouping for different kinds of evidence-associated provenance +EnabledByAssociation +An association between an activity and the gene product or complex that carri... +no + + +EnabledByGeneProductAssociation +An association between an activity and a gene product no @@ -341,18 +346,18 @@

Applicable Classes

no -CellularAnatomicalEntityAssociation -An association between an activity and a cellular anatomical entity term +TermAssociation +An association between an activity and a term, potentially with extensions no -MoleculeAssociation -An association between an activity and a molecule term +BiologicalProcessAssociation +An association between an activity and a biological process term no -TermAssociation -An association between an activity and a term, potentially with extensions +MolecularFunctionAssociation +An association between an activity and a molecular function term no @@ -361,33 +366,28 @@

Applicable Classes

no -EnabledByProteinComplexAssociation -An association between an activity and a protein complex -no - - -MolecularFunctionAssociation -An association between an activity and a molecular function term +CellTypeAssociation +An association between an activity and a cell type term no -EnabledByGeneProductAssociation -An association between an activity and a gene product +EnabledByProteinComplexAssociation +An association between an activity and a protein complex no -CellTypeAssociation -An association between an activity and a cell type term +CellularAnatomicalEntityAssociation +An association between an activity and a cellular anatomical entity term no -EnabledByAssociation -An association between an activity and the gene product or complex that carri... +MoleculeAssociation +An association between an activity and a molecule term no -BiologicalProcessAssociation -An association between an activity and a biological process term +Association +An abstract grouping for different kinds of evidence-associated provenance no diff --git a/has_direct_input/index.html b/has_direct_input/index.html deleted file mode 100644 index e293b58..0000000 --- a/has_direct_input/index.html +++ /dev/null @@ -1,414 +0,0 @@ - - - - - - - - - - - - - - - - - - Slot: has_direct_input - gocam - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
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Slot: has_direct_input

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The input molecules that are directly consumed by the activity

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URI: gocam:has_direct_input

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Applicable Classes

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NameDescriptionModifies Slot
ActivityAn individual activity in a causal model, representing the individual molecul...no
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name: has_direct_input
-description: The input molecules that are directly consumed by the activity
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- - - - - - - - - - \ No newline at end of file diff --git a/pr-preview/pr-11/has_input/index.html b/has_input/index.html similarity index 100% rename from pr-preview/pr-11/has_input/index.html rename to has_input/index.html diff --git a/pr-preview/pr-11/has_output/index.html b/has_output/index.html similarity index 100% rename from pr-preview/pr-11/has_output/index.html rename to has_output/index.html diff --git a/pr-preview/pr-11/has_primary_input/index.html b/has_primary_input/index.html similarity index 100% rename from pr-preview/pr-11/has_primary_input/index.html rename to has_primary_input/index.html diff --git a/pr-preview/pr-11/has_primary_output/index.html b/has_primary_output/index.html similarity index 100% rename from pr-preview/pr-11/has_primary_output/index.html rename to has_primary_output/index.html diff --git a/id/index.html b/id/index.html index e4cb346..7757b4d 100644 --- a/id/index.html +++ b/id/index.html @@ -318,93 +318,93 @@

Applicable Classes

-CellTypeTermObject -A term object that represents a cell type term from CL +GeneProductTermObject +A term object that represents a gene product term from GO or UniProtKB no -Activity -An individual activity in a causal model, representing the individual molecul... +CellularAnatomicalEntityTermObject +A term object that represents a cellular anatomical entity term from GO no -PublicationObject -An object that represents a publication or other kind of reference +TaxonTermObject +A term object that represents a taxon term from NCBITaxon no -BiologicalProcessTermObject -A term object that represents a biological process term from GO +InformationBiomacromoleculeTermObject +An abstract class for all information biomacromolecule term objects no -TermObject -An abstract class for all ontology term objects +PhaseTermObject +A term object that represents a phase term from GO or UBERON no -CellularAnatomicalEntityTermObject -A term object that represents a cellular anatomical entity term from GO +PublicationObject +An object that represents a publication or other kind of reference no -PhaseTermObject -A term object that represents a phase term from GO or UBERON +PredicateTermObject +A term object that represents a taxon term from NCBITaxon no -InformationBiomacromoleculeTermObject -An abstract class for all information biomacromolecule term objects +Activity +An individual activity in a causal model, representing the individual molecul... no -GeneProductTermObject -A term object that represents a gene product term from GO or UniProtKB +EvidenceTermObject +A term object that represents an evidence term from ECO no -MolecularFunctionTermObject -A term object that represents a molecular function term from GO +CellTypeTermObject +A term object that represents a cell type term from CL no -TaxonTermObject -A term object that represents a taxon term from NCBITaxon +GrossAnatomicalStructureTermObject +A term object that represents a gross anatomical structure term from UBERON no -EvidenceTermObject -A term object that represents an evidence term from ECO +BiologicalProcessTermObject +A term object that represents a biological process term from GO no -Object -An abstract class for all identified objects in a model +TermObject +An abstract class for all ontology term objects no -ProteinComplexTermObject -A term object that represents a protein complex term from GO +MolecularFunctionTermObject +A term object that represents a molecular function term from GO no -GrossAnatomicalStructureTermObject -A term object that represents a gross anatomical structure term from UBERON +Model +A model of a biological program consisting of a set of causally connected act... no -MoleculeTermObject -A term object that represents a molecule term from CHEBI or UniProtKB +Object +An abstract class for all identified objects in a model no -PredicateTermObject -A term object that represents a taxon term from NCBITaxon +MoleculeTermObject +A term object that represents a molecule term from CHEBI or UniProtKB no -Model -A model of a biological program consisting of a set of causally connected act... +ProteinComplexTermObject +A term object that represents a protein complex term from GO no diff --git a/index.html b/index.html index 3956017..d19e430 100644 --- a/index.html +++ b/index.html @@ -578,10 +578,22 @@

Slots

-has_direct_input +has_input The input molecules that are directly consumed by the activity +has_output +The output molecules that are directly produced by the activity + + +has_primary_input +The primary input molecule that is directly consumed by the activity + + +has_primary_output +The primary output molecule that is directly produced by the activity + + id The identifier of the model diff --git a/label/index.html b/label/index.html index 0983995..14af8e9 100644 --- a/label/index.html +++ b/label/index.html @@ -331,73 +331,73 @@

Applicable Classes

-CellTypeTermObject -A term object that represents a cell type term from CL +GeneProductTermObject +A term object that represents a gene product term from GO or UniProtKB no -PublicationObject -An object that represents a publication or other kind of reference +CellularAnatomicalEntityTermObject +A term object that represents a cellular anatomical entity term from GO no -BiologicalProcessTermObject -A term object that represents a biological process term from GO +TaxonTermObject +A term object that represents a taxon term from NCBITaxon no -TermObject -An abstract class for all ontology term objects +InformationBiomacromoleculeTermObject +An abstract class for all information biomacromolecule term objects no -CellularAnatomicalEntityTermObject -A term object that represents a cellular anatomical entity term from GO +PhaseTermObject +A term object that represents a phase term from GO or UBERON no -PhaseTermObject -A term object that represents a phase term from GO or UBERON +PublicationObject +An object that represents a publication or other kind of reference no -InformationBiomacromoleculeTermObject -An abstract class for all information biomacromolecule term objects +PredicateTermObject +A term object that represents a taxon term from NCBITaxon no -GeneProductTermObject -A term object that represents a gene product term from GO or UniProtKB +GrossAnatomicalStructureTermObject +A term object that represents a gross anatomical structure term from UBERON no -MolecularFunctionTermObject -A term object that represents a molecular function term from GO +EvidenceTermObject +A term object that represents an evidence term from ECO no -TaxonTermObject -A term object that represents a taxon term from NCBITaxon +CellTypeTermObject +A term object that represents a cell type term from CL no -EvidenceTermObject -A term object that represents an evidence term from ECO +BiologicalProcessTermObject +A term object that represents a biological process term from GO no -Object -An abstract class for all identified objects in a model +TermObject +An abstract class for all ontology term objects no -ProteinComplexTermObject -A term object that represents a protein complex term from GO +MolecularFunctionTermObject +A term object that represents a molecular function term from GO no -GrossAnatomicalStructureTermObject -A term object that represents a gross anatomical structure term from UBERON +Object +An abstract class for all identified objects in a model no @@ -406,8 +406,8 @@

Applicable Classes

no -PredicateTermObject -A term object that represents a taxon term from NCBITaxon +ProteinComplexTermObject +A term object that represents a protein complex term from GO no diff --git a/obsolete/index.html b/obsolete/index.html index 2275144..515990b 100644 --- a/obsolete/index.html +++ b/obsolete/index.html @@ -331,73 +331,73 @@

Applicable Classes

-CellTypeTermObject -A term object that represents a cell type term from CL +GeneProductTermObject +A term object that represents a gene product term from GO or UniProtKB no -PublicationObject -An object that represents a publication or other kind of reference +CellularAnatomicalEntityTermObject +A term object that represents a cellular anatomical entity term from GO no -BiologicalProcessTermObject -A term object that represents a biological process term from GO +TaxonTermObject +A term object that represents a taxon term from NCBITaxon no -TermObject -An abstract class for all ontology term objects +InformationBiomacromoleculeTermObject +An abstract class for all information biomacromolecule term objects no -CellularAnatomicalEntityTermObject -A term object that represents a cellular anatomical entity term from GO +PhaseTermObject +A term object that represents a phase term from GO or UBERON no -PhaseTermObject -A term object that represents a phase term from GO or UBERON +PublicationObject +An object that represents a publication or other kind of reference no -InformationBiomacromoleculeTermObject -An abstract class for all information biomacromolecule term objects +PredicateTermObject +A term object that represents a taxon term from NCBITaxon no -GeneProductTermObject -A term object that represents a gene product term from GO or UniProtKB +GrossAnatomicalStructureTermObject +A term object that represents a gross anatomical structure term from UBERON no -MolecularFunctionTermObject -A term object that represents a molecular function term from GO +EvidenceTermObject +A term object that represents an evidence term from ECO no -TaxonTermObject -A term object that represents a taxon term from NCBITaxon +CellTypeTermObject +A term object that represents a cell type term from CL no -EvidenceTermObject -A term object that represents an evidence term from ECO +BiologicalProcessTermObject +A term object that represents a biological process term from GO no -Object -An abstract class for all identified objects in a model +TermObject +An abstract class for all ontology term objects no -ProteinComplexTermObject -A term object that represents a protein complex term from GO +MolecularFunctionTermObject +A term object that represents a molecular function term from GO no -GrossAnatomicalStructureTermObject -A term object that represents a gross anatomical structure term from UBERON +Object +An abstract class for all identified objects in a model no @@ -406,8 +406,8 @@

Applicable Classes

no -PredicateTermObject -A term object that represents a taxon term from NCBITaxon +ProteinComplexTermObject +A term object that represents a protein complex term from GO no diff --git a/pr-preview/pr-10/.nojekyll b/pr-preview/pr-10/.nojekyll deleted file mode 100644 index e69de29..0000000 diff --git a/pr-preview/pr-10/404.html b/pr-preview/pr-10/404.html deleted file mode 100644 index 5145b7f..0000000 --- a/pr-preview/pr-10/404.html +++ /dev/null @@ -1,296 +0,0 @@ - - - - - - - - - - - - - - - - gocam - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
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Class: Activity

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An individual activity in a causal model, representing the individual molecular activity of a single gene product or complex in the context of a particular model

-

URI: gocam:Activity

-
classDiagram - class Activity - click Activity href "../Activity" - Activity : causal_associations - - - - - Activity --> "*" CausalAssociation : causal_associations - click CausalAssociation href "../CausalAssociation" - - - Activity : enabled_by - - - - - Activity --> "0..1" EnabledByAssociation : enabled_by - click EnabledByAssociation href "../EnabledByAssociation" - - - Activity : has_direct_input - - - - - Activity --> "0..1" MoleculeAssociation : has_direct_input - click MoleculeAssociation href "../MoleculeAssociation" - - - Activity : id - - Activity : molecular_function - - - - - Activity --> "0..1" MolecularFunctionAssociation : molecular_function - click MolecularFunctionAssociation href "../MolecularFunctionAssociation" - - - Activity : occurs_in - - - - - Activity --> "0..1" CellularAnatomicalEntityAssociation : occurs_in - click CellularAnatomicalEntityAssociation href "../CellularAnatomicalEntityAssociation" - - - Activity : part_of - - - - - Activity --> "0..1" BiologicalProcessAssociation : part_of - click BiologicalProcessAssociation href "../BiologicalProcessAssociation" - - - Activity : provenances - - - - - Activity --> "*" ProvenanceInfo : provenances - click ProvenanceInfo href "../ProvenanceInfo" - - - -
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NameCardinality and RangeDescriptionInheritance
id1
Uriorcurie		Identifier of the activity unitdirect
enabled_by0..1
EnabledByAssociation		The gene product or complex that carries out the activitydirect
molecular_function0..1
MolecularFunctionAssociation		The molecular function that is carried out by the gene product or complexdirect
occurs_in0..1
CellularAnatomicalEntityAssociation		The cellular location in which the activity occursdirect
part_of0..1
BiologicalProcessAssociation		The larger biological process in which the activity is a partdirect
has_direct_input0..1
MoleculeAssociation		The input molecules that are directly consumed by the activitydirect
causal_associations*
CausalAssociation		The causal associations that connect this activity to other activitiesdirect
provenances*
ProvenanceInfo		Provenance information for the activitydirect
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used byused intypeused
ModelactivitiesrangeActivity
CausalAssociationdownstream_activityrangeActivity
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Aliases

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Identifier and Mapping Information

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Schema Source

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Mapping TypeMapped Value
selfgocam:Activity
nativegocam:Activity
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LinkML Source

- -

Direct

-
-
name: Activity
-description: An individual activity in a causal model, representing the individual
-  molecular activity of a single gene product or complex in the context of a particular
-  model
-from_schema: https://w3id.org/gocam
-aliases:
-- annoton
-attributes:
-  id:
-    name: id
-    description: Identifier of the activity unit. Should be in gocam namespace.
-    comments:
-    - Typically does not need to be exposed to end-user, this exists to allow activity
-      flows
-    from_schema: https://w3id.org/gocam
-    identifier: true
-    domain_of:
-    - Model
-    - Activity
-    - Object
-    range: uriorcurie
-    required: true
-  enabled_by:
-    name: enabled_by
-    description: The gene product or complex that carries out the activity
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    domain_of:
-    - Activity
-    range: EnabledByAssociation
-    inlined: true
-  molecular_function:
-    name: molecular_function
-    description: The molecular function that is carried out by the gene product or
-      complex
-    todos:
-    - currently BP, CC etc are at the level of the activity, not the MolecularFunctionAssociation
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    domain_of:
-    - Activity
-    range: MolecularFunctionAssociation
-    inlined: true
-  occurs_in:
-    name: occurs_in
-    description: The cellular location in which the activity occurs
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    domain_of:
-    - Activity
-    range: CellularAnatomicalEntityAssociation
-    inlined: true
-  part_of:
-    name: part_of
-    description: The larger biological process in which the activity is a part
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    domain_of:
-    - Activity
-    range: BiologicalProcessAssociation
-    inlined: true
-  has_direct_input:
-    name: has_direct_input
-    description: The input molecules that are directly consumed by the activity
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    domain_of:
-    - Activity
-    range: MoleculeAssociation
-    inlined: true
-  causal_associations:
-    name: causal_associations
-    description: The causal associations that connect this activity to other activities
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    multivalued: true
-    domain_of:
-    - Activity
-    range: CausalAssociation
-    inlined: true
-    inlined_as_list: true
-  provenances:
-    name: provenances
-    description: Provenance information for the activity
-    from_schema: https://w3id.org/gocam
-    multivalued: true
-    domain_of:
-    - Model
-    - Activity
-    - EvidenceItem
-    - Association
-    range: ProvenanceInfo
-    inlined: true
-    inlined_as_list: true
-
-
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Induced

-
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name: Activity
-description: An individual activity in a causal model, representing the individual
-  molecular activity of a single gene product or complex in the context of a particular
-  model
-from_schema: https://w3id.org/gocam
-aliases:
-- annoton
-attributes:
-  id:
-    name: id
-    description: Identifier of the activity unit. Should be in gocam namespace.
-    comments:
-    - Typically does not need to be exposed to end-user, this exists to allow activity
-      flows
-    from_schema: https://w3id.org/gocam
-    identifier: true
-    alias: id
-    owner: Activity
-    domain_of:
-    - Model
-    - Activity
-    - Object
-    range: uriorcurie
-    required: true
-  enabled_by:
-    name: enabled_by
-    description: The gene product or complex that carries out the activity
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    alias: enabled_by
-    owner: Activity
-    domain_of:
-    - Activity
-    range: EnabledByAssociation
-    inlined: true
-  molecular_function:
-    name: molecular_function
-    description: The molecular function that is carried out by the gene product or
-      complex
-    todos:
-    - currently BP, CC etc are at the level of the activity, not the MolecularFunctionAssociation
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    alias: molecular_function
-    owner: Activity
-    domain_of:
-    - Activity
-    range: MolecularFunctionAssociation
-    inlined: true
-  occurs_in:
-    name: occurs_in
-    description: The cellular location in which the activity occurs
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    alias: occurs_in
-    owner: Activity
-    domain_of:
-    - Activity
-    range: CellularAnatomicalEntityAssociation
-    inlined: true
-  part_of:
-    name: part_of
-    description: The larger biological process in which the activity is a part
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    alias: part_of
-    owner: Activity
-    domain_of:
-    - Activity
-    range: BiologicalProcessAssociation
-    inlined: true
-  has_direct_input:
-    name: has_direct_input
-    description: The input molecules that are directly consumed by the activity
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    alias: has_direct_input
-    owner: Activity
-    domain_of:
-    - Activity
-    range: MoleculeAssociation
-    inlined: true
-  causal_associations:
-    name: causal_associations
-    description: The causal associations that connect this activity to other activities
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    multivalued: true
-    alias: causal_associations
-    owner: Activity
-    domain_of:
-    - Activity
-    range: CausalAssociation
-    inlined: true
-    inlined_as_list: true
-  provenances:
-    name: provenances
-    description: Provenance information for the activity
-    from_schema: https://w3id.org/gocam
-    multivalued: true
-    alias: provenances
-    owner: Activity
-    domain_of:
-    - Model
-    - Activity
-    - EvidenceItem
-    - Association
-    range: ProvenanceInfo
-    inlined: true
-    inlined_as_list: true
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Class: Association

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An abstract grouping for different kinds of evidence-associated provenance

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  • NOTE: this is an abstract class and should not be instantiated directly
    • -
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URI: gocam:Association

-
classDiagram - class Association - click Association href "../Association" - Association <|-- EnabledByAssociation - click EnabledByAssociation href "../EnabledByAssociation" - Association <|-- CausalAssociation - click CausalAssociation href "../CausalAssociation" - Association <|-- TermAssociation - click TermAssociation href "../TermAssociation" - - Association : evidence - - - - - Association --> "*" EvidenceItem : evidence - click EvidenceItem href "../EvidenceItem" - - - Association : provenances - - - - - Association --> "*" ProvenanceInfo : provenances - click ProvenanceInfo href "../ProvenanceInfo" - - - Association : type - - -
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Inheritance

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NameCardinality and RangeDescriptionInheritance
type0..1
String		direct
evidence*
EvidenceItem		direct
provenances*
ProvenanceInfo		direct
-

Identifier and Mapping Information

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Schema Source

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    • -
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Mappings

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Mapping TypeMapped Value
selfgocam:Association
nativegocam:Association
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LinkML Source

- -

Direct

-
-
name: Association
-description: An abstract grouping for different kinds of evidence-associated provenance
-from_schema: https://w3id.org/gocam
-abstract: true
-attributes:
-  type:
-    name: type
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    designates_type: true
-    domain_of:
-    - Association
-    - Object
-  evidence:
-    name: evidence
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    multivalued: true
-    domain_of:
-    - Association
-    range: EvidenceItem
-    inlined: true
-  provenances:
-    name: provenances
-    from_schema: https://w3id.org/gocam
-    multivalued: true
-    domain_of:
-    - Model
-    - Activity
-    - EvidenceItem
-    - Association
-    range: ProvenanceInfo
-    inlined: true
-    inlined_as_list: true
-
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Induced

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name: Association
-description: An abstract grouping for different kinds of evidence-associated provenance
-from_schema: https://w3id.org/gocam
-abstract: true
-attributes:
-  type:
-    name: type
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    designates_type: true
-    alias: type
-    owner: Association
-    domain_of:
-    - Association
-    - Object
-    range: string
-  evidence:
-    name: evidence
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    multivalued: true
-    alias: evidence
-    owner: Association
-    domain_of:
-    - Association
-    range: EvidenceItem
-    inlined: true
-  provenances:
-    name: provenances
-    from_schema: https://w3id.org/gocam
-    multivalued: true
-    alias: provenances
-    owner: Association
-    domain_of:
-    - Model
-    - Activity
-    - EvidenceItem
-    - Association
-    range: ProvenanceInfo
-    inlined: true
-    inlined_as_list: true
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Class: BiologicalProcessAssociation

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An association between an activity and a biological process term

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URI: gocam:BiologicalProcessAssociation

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classDiagram - class BiologicalProcessAssociation - click BiologicalProcessAssociation href "../BiologicalProcessAssociation" - TermAssociation <|-- BiologicalProcessAssociation - click TermAssociation href "../TermAssociation" - - BiologicalProcessAssociation : evidence - - - - - BiologicalProcessAssociation --> "*" EvidenceItem : evidence - click EvidenceItem href "../EvidenceItem" - - - BiologicalProcessAssociation : provenances - - - - - BiologicalProcessAssociation --> "*" ProvenanceInfo : provenances - click ProvenanceInfo href "../ProvenanceInfo" - - - BiologicalProcessAssociation : term - - - - - BiologicalProcessAssociation --> "0..1" BiologicalProcessTermObject : term - click BiologicalProcessTermObject href "../BiologicalProcessTermObject" - - - BiologicalProcessAssociation : type - - -
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Inheritance

- -

Slots

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NameCardinality and RangeDescriptionInheritance
term0..1
BiologicalProcessTermObject		The ontology term that describes the nature of the associationTermAssociation
type0..1
String		Association
evidence*
EvidenceItem		Association
provenances*
ProvenanceInfo		Association
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Usages

- - - - - - - - - - - - - - - - - -
used byused intypeused
Activitypart_ofrangeBiologicalProcessAssociation
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Identifier and Mapping Information

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Schema Source

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    • -
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Mappings

- - - - - - - - - - - - - - - - - -
Mapping TypeMapped Value
selfgocam:BiologicalProcessAssociation
nativegocam:BiologicalProcessAssociation
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LinkML Source

- -

Direct

-
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name: BiologicalProcessAssociation
-description: An association between an activity and a biological process term
-from_schema: https://w3id.org/gocam
-is_a: TermAssociation
-slot_usage:
-  term:
-    name: term
-    domain_of:
-    - EvidenceItem
-    - EnabledByAssociation
-    - TermAssociation
-    range: BiologicalProcessTermObject
-  happens_during:
-    name: happens_during
-    description: Optional extension describing where the BP takes place
-    range: PhaseTermObject
-  part_of:
-    name: part_of
-    description: Optional extension allowing hierarchical nesting of BPs
-    range: BiologicalProcessTermObject
-
-
-
-

Induced

-
-
name: BiologicalProcessAssociation
-description: An association between an activity and a biological process term
-from_schema: https://w3id.org/gocam
-is_a: TermAssociation
-slot_usage:
-  term:
-    name: term
-    domain_of:
-    - EvidenceItem
-    - EnabledByAssociation
-    - TermAssociation
-    range: BiologicalProcessTermObject
-  happens_during:
-    name: happens_during
-    description: Optional extension describing where the BP takes place
-    range: PhaseTermObject
-  part_of:
-    name: part_of
-    description: Optional extension allowing hierarchical nesting of BPs
-    range: BiologicalProcessTermObject
-attributes:
-  term:
-    name: term
-    description: The ontology term that describes the nature of the association
-    from_schema: https://w3id.org/gocam
-    alias: term
-    owner: BiologicalProcessAssociation
-    domain_of:
-    - EvidenceItem
-    - EnabledByAssociation
-    - TermAssociation
-    range: BiologicalProcessTermObject
-  type:
-    name: type
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    designates_type: true
-    alias: type
-    owner: BiologicalProcessAssociation
-    domain_of:
-    - Association
-    - Object
-    range: string
-  evidence:
-    name: evidence
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    multivalued: true
-    alias: evidence
-    owner: BiologicalProcessAssociation
-    domain_of:
-    - Association
-    range: EvidenceItem
-    inlined: true
-  provenances:
-    name: provenances
-    from_schema: https://w3id.org/gocam
-    multivalued: true
-    alias: provenances
-    owner: BiologicalProcessAssociation
-    domain_of:
-    - Model
-    - Activity
-    - EvidenceItem
-    - Association
-    range: ProvenanceInfo
-    inlined: true
-    inlined_as_list: true
-
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- -
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- -
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- - - - \ No newline at end of file diff --git a/pr-preview/pr-10/BiologicalProcessTermObject/index.html b/pr-preview/pr-10/BiologicalProcessTermObject/index.html deleted file mode 100644 index 675810e..0000000 --- a/pr-preview/pr-10/BiologicalProcessTermObject/index.html +++ /dev/null @@ -1,420 +0,0 @@ - - - - - - - - - - -Class: BiologicalProcessTermObject - gocam - - - - - - - - - - - -
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Class: BiologicalProcessTermObject

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A term object that represents a biological process term from GO

-

URI: gocam:BiologicalProcessTermObject

-
classDiagram - class BiologicalProcessTermObject - click BiologicalProcessTermObject href "../BiologicalProcessTermObject" - TermObject <|-- BiologicalProcessTermObject - click TermObject href "../TermObject" - - BiologicalProcessTermObject : id - - BiologicalProcessTermObject : label - - BiologicalProcessTermObject : obsolete - - BiologicalProcessTermObject : type - - -
-

Inheritance

- -

Slots

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
NameCardinality and RangeDescriptionInheritance
id1
Uriorcurie		Object
label0..1
String		Object
type0..1
Uriorcurie		Object
obsolete0..1
Boolean		Object
-

Usages

- - - - - - - - - - - - - - - - - -
used byused intypeused
BiologicalProcessAssociationtermrangeBiologicalProcessTermObject
-

Identifier and Mapping Information

-

Valid ID Prefixes

-

Instances of this class should have identifiers with one of the following prefixes:

-
    -
  • GO
    • -
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Schema Source

-
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  • from schema: https://w3id.org/gocam
    • -
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Mappings

- - - - - - - - - - - - - - - - - -
Mapping TypeMapped Value
selfgocam:BiologicalProcessTermObject
nativegocam:BiologicalProcessTermObject
-

LinkML Source

- -

Direct

-
-
name: BiologicalProcessTermObject
-id_prefixes:
-- GO
-description: A term object that represents a biological process term from GO
-from_schema: https://w3id.org/gocam
-is_a: TermObject
-
-
-
-

Induced

-
-
name: BiologicalProcessTermObject
-id_prefixes:
-- GO
-description: A term object that represents a biological process term from GO
-from_schema: https://w3id.org/gocam
-is_a: TermObject
-attributes:
-  id:
-    name: id
-    from_schema: https://w3id.org/gocam
-    identifier: true
-    alias: id
-    owner: BiologicalProcessTermObject
-    domain_of:
-    - Model
-    - Activity
-    - Object
-    range: uriorcurie
-    required: true
-  label:
-    name: label
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    slot_uri: rdfs:label
-    alias: label
-    owner: BiologicalProcessTermObject
-    domain_of:
-    - Object
-    range: string
-  type:
-    name: type
-    from_schema: https://w3id.org/gocam
-    designates_type: true
-    alias: type
-    owner: BiologicalProcessTermObject
-    domain_of:
-    - Association
-    - Object
-    range: uriorcurie
-  obsolete:
-    name: obsolete
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-    owner: BiologicalProcessTermObject
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A binary (true or false) value

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Schema Source

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Class: CausalAssociation

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A causal association between two activities

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URI: gocam:CausalAssociation

-
classDiagram - class CausalAssociation - click CausalAssociation href "../CausalAssociation" - Association <|-- CausalAssociation - click Association href "../Association" - - CausalAssociation : downstream_activity - - - - - CausalAssociation --> "0..1" Activity : downstream_activity - click Activity href "../Activity" - - - CausalAssociation : evidence - - - - - CausalAssociation --> "*" EvidenceItem : evidence - click EvidenceItem href "../EvidenceItem" - - - CausalAssociation : predicate - - - - - CausalAssociation --> "0..1" PredicateTermObject : predicate - click PredicateTermObject href "../PredicateTermObject" - - - CausalAssociation : provenances - - - - - CausalAssociation --> "*" ProvenanceInfo : provenances - click ProvenanceInfo href "../ProvenanceInfo" - - - CausalAssociation : type - - -
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Inheritance

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NameCardinality and RangeDescriptionInheritance
predicate0..1
PredicateTermObject		The RO relation that represents the type of relationshipdirect
downstream_activity0..1
Activity		The activity unit that is downstream of this onedirect
type0..1
String		Association
evidence*
EvidenceItem		Association
provenances*
ProvenanceInfo		Association
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used byused intypeused
Activitycausal_associationsrangeCausalAssociation
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Identifier and Mapping Information

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Schema Source

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Mappings

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Mapping TypeMapped Value
selfgocam:CausalAssociation
nativegocam:CausalAssociation
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LinkML Source

- -

Direct

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name: CausalAssociation
-description: A causal association between two activities
-from_schema: https://w3id.org/gocam
-is_a: Association
-attributes:
-  predicate:
-    name: predicate
-    description: The RO relation that represents the type of relationship
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    domain_of:
-    - CausalAssociation
-    range: PredicateTermObject
-  downstream_activity:
-    name: downstream_activity
-    description: The activity unit that is downstream of this one
-    from_schema: https://w3id.org/gocam
-    aliases:
-    - object
-    rank: 1000
-    domain_of:
-    - CausalAssociation
-    range: Activity
-
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Induced

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name: CausalAssociation
-description: A causal association between two activities
-from_schema: https://w3id.org/gocam
-is_a: Association
-attributes:
-  predicate:
-    name: predicate
-    description: The RO relation that represents the type of relationship
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    alias: predicate
-    owner: CausalAssociation
-    domain_of:
-    - CausalAssociation
-    range: PredicateTermObject
-  downstream_activity:
-    name: downstream_activity
-    description: The activity unit that is downstream of this one
-    from_schema: https://w3id.org/gocam
-    aliases:
-    - object
-    rank: 1000
-    alias: downstream_activity
-    owner: CausalAssociation
-    domain_of:
-    - CausalAssociation
-    range: Activity
-  type:
-    name: type
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    designates_type: true
-    alias: type
-    owner: CausalAssociation
-    domain_of:
-    - Association
-    - Object
-    range: string
-  evidence:
-    name: evidence
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    multivalued: true
-    alias: evidence
-    owner: CausalAssociation
-    domain_of:
-    - Association
-    range: EvidenceItem
-    inlined: true
-  provenances:
-    name: provenances
-    from_schema: https://w3id.org/gocam
-    multivalued: true
-    alias: provenances
-    owner: CausalAssociation
-    domain_of:
-    - Model
-    - Activity
-    - EvidenceItem
-    - Association
-    range: ProvenanceInfo
-    inlined: true
-    inlined_as_list: true
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Enum: CausalPredicateEnum

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URI: CausalPredicateEnum

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Permissible Values

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ValueMeaningDescription
causally upstream of, positive effectRO:0002304
causally upstream of, negative effectRO:0002305
causally upstream ofRO:0002411
immediately causally upstream ofRO:0002412
causally upstream of or withinRO:0002418
causally upstream of or within, negative effectRO:0004046
causally upstream of or within, positive effectRO:0004047
regulatesRO:0002211
negatively regulatesRO:0002212
positively regulatesRO:0002213
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Identifier and Mapping Information

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Schema Source

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LinkML Source

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name: CausalPredicateEnum
-from_schema: https://w3id.org/gocam
-rank: 1000
-permissible_values:
-  causally upstream of, positive effect:
-    text: causally upstream of, positive effect
-    meaning: RO:0002304
-  causally upstream of, negative effect:
-    text: causally upstream of, negative effect
-    meaning: RO:0002305
-  causally upstream of:
-    text: causally upstream of
-    meaning: RO:0002411
-  immediately causally upstream of:
-    text: immediately causally upstream of
-    meaning: RO:0002412
-  causally upstream of or within:
-    text: causally upstream of or within
-    meaning: RO:0002418
-  causally upstream of or within, negative effect:
-    text: causally upstream of or within, negative effect
-    meaning: RO:0004046
-  causally upstream of or within, positive effect:
-    text: causally upstream of or within, positive effect
-    meaning: RO:0004047
-  regulates:
-    text: regulates
-    meaning: RO:0002211
-  negatively regulates:
-    text: negatively regulates
-    meaning: RO:0002212
-  positively regulates:
-    text: positively regulates
-    meaning: RO:0002213
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Class: CellTypeAssociation

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An association between an activity and a cell type term

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URI: gocam:CellTypeAssociation

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classDiagram - class CellTypeAssociation - click CellTypeAssociation href "../CellTypeAssociation" - TermAssociation <|-- CellTypeAssociation - click TermAssociation href "../TermAssociation" - - CellTypeAssociation : evidence - - - - - CellTypeAssociation --> "*" EvidenceItem : evidence - click EvidenceItem href "../EvidenceItem" - - - CellTypeAssociation : provenances - - - - - CellTypeAssociation --> "*" ProvenanceInfo : provenances - click ProvenanceInfo href "../ProvenanceInfo" - - - CellTypeAssociation : term - - - - - CellTypeAssociation --> "0..1" CellTypeTermObject : term - click CellTypeTermObject href "../CellTypeTermObject" - - - CellTypeAssociation : type - - -
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Inheritance

- -

Slots

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
NameCardinality and RangeDescriptionInheritance
term0..1
CellTypeTermObject		The ontology term that describes the nature of the associationTermAssociation
type0..1
String		Association
evidence*
EvidenceItem		Association
provenances*
ProvenanceInfo		Association
-

Identifier and Mapping Information

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Schema Source

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Mappings

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Mapping TypeMapped Value
selfgocam:CellTypeAssociation
nativegocam:CellTypeAssociation
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LinkML Source

- -

Direct

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name: CellTypeAssociation
-description: An association between an activity and a cell type term
-from_schema: https://w3id.org/gocam
-is_a: TermAssociation
-slot_usage:
-  term:
-    name: term
-    domain_of:
-    - EvidenceItem
-    - EnabledByAssociation
-    - TermAssociation
-    range: CellTypeTermObject
-  part_of:
-    name: part_of
-    range: GrossAnatomyAssociation
-
-
-
-

Induced

-
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name: CellTypeAssociation
-description: An association between an activity and a cell type term
-from_schema: https://w3id.org/gocam
-is_a: TermAssociation
-slot_usage:
-  term:
-    name: term
-    domain_of:
-    - EvidenceItem
-    - EnabledByAssociation
-    - TermAssociation
-    range: CellTypeTermObject
-  part_of:
-    name: part_of
-    range: GrossAnatomyAssociation
-attributes:
-  term:
-    name: term
-    description: The ontology term that describes the nature of the association
-    from_schema: https://w3id.org/gocam
-    alias: term
-    owner: CellTypeAssociation
-    domain_of:
-    - EvidenceItem
-    - EnabledByAssociation
-    - TermAssociation
-    range: CellTypeTermObject
-  type:
-    name: type
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    designates_type: true
-    alias: type
-    owner: CellTypeAssociation
-    domain_of:
-    - Association
-    - Object
-    range: string
-  evidence:
-    name: evidence
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    multivalued: true
-    alias: evidence
-    owner: CellTypeAssociation
-    domain_of:
-    - Association
-    range: EvidenceItem
-    inlined: true
-  provenances:
-    name: provenances
-    from_schema: https://w3id.org/gocam
-    multivalued: true
-    alias: provenances
-    owner: CellTypeAssociation
-    domain_of:
-    - Model
-    - Activity
-    - EvidenceItem
-    - Association
-    range: ProvenanceInfo
-    inlined: true
-    inlined_as_list: true
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Class: CellTypeTermObject

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A term object that represents a cell type term from CL

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URI: gocam:CellTypeTermObject

-
classDiagram - class CellTypeTermObject - click CellTypeTermObject href "../CellTypeTermObject" - TermObject <|-- CellTypeTermObject - click TermObject href "../TermObject" - - CellTypeTermObject : id - - CellTypeTermObject : label - - CellTypeTermObject : obsolete - - CellTypeTermObject : type - - -
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NameCardinality and RangeDescriptionInheritance
id1
Uriorcurie		Object
label0..1
String		Object
type0..1
Uriorcurie		Object
obsolete0..1
Boolean		Object
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Usages

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used byused intypeused
CellTypeAssociationtermrangeCellTypeTermObject
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Identifier and Mapping Information

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Valid ID Prefixes

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Instances of this class should have identifiers with one of the following prefixes:

-
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    CL

    -
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    PO

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    FAO

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    DDANAT

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Mapping TypeMapped Value
selfgocam:CellTypeTermObject
nativegocam:CellTypeTermObject
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LinkML Source

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Direct

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name: CellTypeTermObject
-id_prefixes:
-- CL
-- PO
-- FAO
-- DDANAT
-description: A term object that represents a cell type term from CL
-from_schema: https://w3id.org/gocam
-is_a: TermObject
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Induced

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name: CellTypeTermObject
-id_prefixes:
-- CL
-- PO
-- FAO
-- DDANAT
-description: A term object that represents a cell type term from CL
-from_schema: https://w3id.org/gocam
-is_a: TermObject
-attributes:
-  id:
-    name: id
-    from_schema: https://w3id.org/gocam
-    identifier: true
-    alias: id
-    owner: CellTypeTermObject
-    domain_of:
-    - Model
-    - Activity
-    - Object
-    range: uriorcurie
-    required: true
-  label:
-    name: label
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    slot_uri: rdfs:label
-    alias: label
-    owner: CellTypeTermObject
-    domain_of:
-    - Object
-    range: string
-  type:
-    name: type
-    from_schema: https://w3id.org/gocam
-    designates_type: true
-    alias: type
-    owner: CellTypeTermObject
-    domain_of:
-    - Association
-    - Object
-    range: uriorcurie
-  obsolete:
-    name: obsolete
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    alias: obsolete
-    owner: CellTypeTermObject
-    domain_of:
-    - Object
-    range: boolean
-
-
-
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- -
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- -
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- - - - \ No newline at end of file diff --git a/pr-preview/pr-10/CellularAnatomicalEntityAssociation/index.html b/pr-preview/pr-10/CellularAnatomicalEntityAssociation/index.html deleted file mode 100644 index 60c6c8e..0000000 --- a/pr-preview/pr-10/CellularAnatomicalEntityAssociation/index.html +++ /dev/null @@ -1,455 +0,0 @@ - - - - - - - - - - -Class: CellularAnatomicalEntityAssociation - gocam - - - - - - - - - - - -
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Class: CellularAnatomicalEntityAssociation

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An association between an activity and a cellular anatomical entity term

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URI: gocam:CellularAnatomicalEntityAssociation

-
classDiagram - class CellularAnatomicalEntityAssociation - click CellularAnatomicalEntityAssociation href "../CellularAnatomicalEntityAssociation" - TermAssociation <|-- CellularAnatomicalEntityAssociation - click TermAssociation href "../TermAssociation" - - CellularAnatomicalEntityAssociation : evidence - - - - - CellularAnatomicalEntityAssociation --> "*" EvidenceItem : evidence - click EvidenceItem href "../EvidenceItem" - - - CellularAnatomicalEntityAssociation : provenances - - - - - CellularAnatomicalEntityAssociation --> "*" ProvenanceInfo : provenances - click ProvenanceInfo href "../ProvenanceInfo" - - - CellularAnatomicalEntityAssociation : term - - - - - CellularAnatomicalEntityAssociation --> "0..1" CellularAnatomicalEntityTermObject : term - click CellularAnatomicalEntityTermObject href "../CellularAnatomicalEntityTermObject" - - - CellularAnatomicalEntityAssociation : type - - -
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Inheritance

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NameCardinality and RangeDescriptionInheritance
term0..1
CellularAnatomicalEntityTermObject		The ontology term that describes the nature of the associationTermAssociation
type0..1
String		Association
evidence*
EvidenceItem		Association
provenances*
ProvenanceInfo		Association
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Usages

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used byused intypeused
Activityoccurs_inrangeCellularAnatomicalEntityAssociation
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Identifier and Mapping Information

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Schema Source

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Mappings

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Mapping TypeMapped Value
selfgocam:CellularAnatomicalEntityAssociation
nativegocam:CellularAnatomicalEntityAssociation
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Direct

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name: CellularAnatomicalEntityAssociation
-description: An association between an activity and a cellular anatomical entity term
-from_schema: https://w3id.org/gocam
-is_a: TermAssociation
-slot_usage:
-  term:
-    name: term
-    domain_of:
-    - EvidenceItem
-    - EnabledByAssociation
-    - TermAssociation
-    range: CellularAnatomicalEntityTermObject
-  part_of:
-    name: part_of
-    range: CellTypeAssociation
-
-
-
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Induced

-
-
name: CellularAnatomicalEntityAssociation
-description: An association between an activity and a cellular anatomical entity term
-from_schema: https://w3id.org/gocam
-is_a: TermAssociation
-slot_usage:
-  term:
-    name: term
-    domain_of:
-    - EvidenceItem
-    - EnabledByAssociation
-    - TermAssociation
-    range: CellularAnatomicalEntityTermObject
-  part_of:
-    name: part_of
-    range: CellTypeAssociation
-attributes:
-  term:
-    name: term
-    description: The ontology term that describes the nature of the association
-    from_schema: https://w3id.org/gocam
-    alias: term
-    owner: CellularAnatomicalEntityAssociation
-    domain_of:
-    - EvidenceItem
-    - EnabledByAssociation
-    - TermAssociation
-    range: CellularAnatomicalEntityTermObject
-  type:
-    name: type
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    designates_type: true
-    alias: type
-    owner: CellularAnatomicalEntityAssociation
-    domain_of:
-    - Association
-    - Object
-    range: string
-  evidence:
-    name: evidence
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    multivalued: true
-    alias: evidence
-    owner: CellularAnatomicalEntityAssociation
-    domain_of:
-    - Association
-    range: EvidenceItem
-    inlined: true
-  provenances:
-    name: provenances
-    from_schema: https://w3id.org/gocam
-    multivalued: true
-    alias: provenances
-    owner: CellularAnatomicalEntityAssociation
-    domain_of:
-    - Model
-    - Activity
-    - EvidenceItem
-    - Association
-    range: ProvenanceInfo
-    inlined: true
-    inlined_as_list: true
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- - - - \ No newline at end of file diff --git a/pr-preview/pr-10/CellularAnatomicalEntityTermObject/index.html b/pr-preview/pr-10/CellularAnatomicalEntityTermObject/index.html deleted file mode 100644 index f8034d0..0000000 --- a/pr-preview/pr-10/CellularAnatomicalEntityTermObject/index.html +++ /dev/null @@ -1,422 +0,0 @@ - - - - - - - - - - -Class: CellularAnatomicalEntityTermObject - gocam - - - - - - - - - - - -
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Class: CellularAnatomicalEntityTermObject

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A term object that represents a cellular anatomical entity term from GO

-

URI: gocam:CellularAnatomicalEntityTermObject

-
classDiagram - class CellularAnatomicalEntityTermObject - click CellularAnatomicalEntityTermObject href "../CellularAnatomicalEntityTermObject" - TermObject <|-- CellularAnatomicalEntityTermObject - click TermObject href "../TermObject" - - CellularAnatomicalEntityTermObject : id - - CellularAnatomicalEntityTermObject : label - - CellularAnatomicalEntityTermObject : obsolete - - CellularAnatomicalEntityTermObject : type - - -
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Inheritance

- -

Slots

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
NameCardinality and RangeDescriptionInheritance
id1
Uriorcurie		Object
label0..1
String		Object
type0..1
Uriorcurie		Object
obsolete0..1
Boolean		Object
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Usages

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used byused intypeused
CellularAnatomicalEntityAssociationtermrangeCellularAnatomicalEntityTermObject
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Identifier and Mapping Information

-

Valid ID Prefixes

-

Instances of this class should have identifiers with one of the following prefixes:

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  • GO
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Schema Source

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  • from schema: https://w3id.org/gocam
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Mappings

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Mapping TypeMapped Value
selfgocam:CellularAnatomicalEntityTermObject
nativegocam:CellularAnatomicalEntityTermObject
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name: CellularAnatomicalEntityTermObject
-id_prefixes:
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-description: A term object that represents a cellular anatomical entity term from
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-is_a: TermObject
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Induced

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name: CellularAnatomicalEntityTermObject
-id_prefixes:
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-description: A term object that represents a cellular anatomical entity term from
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-from_schema: https://w3id.org/gocam
-is_a: TermObject
-attributes:
-  id:
-    name: id
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-    identifier: true
-    alias: id
-    owner: CellularAnatomicalEntityTermObject
-    domain_of:
-    - Model
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-    range: uriorcurie
-    required: true
-  label:
-    name: label
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    slot_uri: rdfs:label
-    alias: label
-    owner: CellularAnatomicalEntityTermObject
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-    range: string
-  type:
-    name: type
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-    designates_type: true
-    alias: type
-    owner: CellularAnatomicalEntityTermObject
-    domain_of:
-    - Association
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-    range: uriorcurie
-  obsolete:
-    name: obsolete
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    alias: obsolete
-    owner: CellularAnatomicalEntityTermObject
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Type: Curie

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a compact URI

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URI: xsd:string

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    base: Curie

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Identifier and Mapping Information

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Type: Date

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a date (year, month and day) in an idealized calendar

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URI: xsd:date

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Identifier and Mapping Information

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Type: DateOrDatetime

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Either a date or a datetime

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URI: linkml:DateOrDatetime

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Identifier and Mapping Information

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Type: Datetime

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The combination of a date and time

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URI: xsd:dateTime

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Identifier and Mapping Information

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Type: Decimal

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A real number with arbitrary precision that conforms to the xsd:decimal specification

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URI: xsd:decimal

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    base: Decimal

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    uri: xsd:decimal

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Identifier and Mapping Information

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Schema Source

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Type: Double

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A real number that conforms to the xsd:double specification

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URI: xsd:double

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    base: float

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    uri: xsd:double

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Identifier and Mapping Information

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Schema Source

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- - - - - - - - - - \ No newline at end of file diff --git a/pr-preview/pr-10/EnabledByAssociation/index.html b/pr-preview/pr-10/EnabledByAssociation/index.html deleted file mode 100644 index b319df3..0000000 --- a/pr-preview/pr-10/EnabledByAssociation/index.html +++ /dev/null @@ -1,458 +0,0 @@ - - - - - - - - - - -Class: EnabledByAssociation - gocam - - - - - - - - - - - -
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Class: EnabledByAssociation

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An association between an activity and the gene product or complex that carries it out

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  • NOTE: this is an abstract class and should not be instantiated directly
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URI: gocam:EnabledByAssociation

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classDiagram - class EnabledByAssociation - click EnabledByAssociation href "../EnabledByAssociation" - Association <|-- EnabledByAssociation - click Association href "../Association" - - - EnabledByAssociation <|-- EnabledByGeneProductAssociation - click EnabledByGeneProductAssociation href "../EnabledByGeneProductAssociation" - EnabledByAssociation <|-- EnabledByProteinComplexAssociation - click EnabledByProteinComplexAssociation href "../EnabledByProteinComplexAssociation" - - - EnabledByAssociation : evidence - - - - - EnabledByAssociation --> "*" EvidenceItem : evidence - click EvidenceItem href "../EvidenceItem" - - - EnabledByAssociation : provenances - - - - - EnabledByAssociation --> "*" ProvenanceInfo : provenances - click ProvenanceInfo href "../ProvenanceInfo" - - - EnabledByAssociation : term - - - - - EnabledByAssociation --> "0..1" InformationBiomacromoleculeTermObject : term - click InformationBiomacromoleculeTermObject href "../InformationBiomacromoleculeTermObject" - - - EnabledByAssociation : type - - -
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Inheritance

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Slots

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NameCardinality and RangeDescriptionInheritance
term0..1
InformationBiomacromoleculeTermObject		The gene product or complex that carries out the activitydirect
type0..1
String		Association
evidence*
EvidenceItem		Association
provenances*
ProvenanceInfo		Association
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Usages

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used byused intypeused
Activityenabled_byrangeEnabledByAssociation
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Identifier and Mapping Information

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Schema Source

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Mappings

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Mapping TypeMapped Value
selfgocam:EnabledByAssociation
nativegocam:EnabledByAssociation
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LinkML Source

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Direct

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name: EnabledByAssociation
-description: An association between an activity and the gene product or complex that
-  carries it out
-from_schema: https://w3id.org/gocam
-is_a: Association
-abstract: true
-attributes:
-  term:
-    name: term
-    description: The gene product or complex that carries out the activity
-    from_schema: https://w3id.org/gocam
-    domain_of:
-    - EvidenceItem
-    - EnabledByAssociation
-    - TermAssociation
-    range: InformationBiomacromoleculeTermObject
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Induced

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name: EnabledByAssociation
-description: An association between an activity and the gene product or complex that
-  carries it out
-from_schema: https://w3id.org/gocam
-is_a: Association
-abstract: true
-attributes:
-  term:
-    name: term
-    description: The gene product or complex that carries out the activity
-    from_schema: https://w3id.org/gocam
-    alias: term
-    owner: EnabledByAssociation
-    domain_of:
-    - EvidenceItem
-    - EnabledByAssociation
-    - TermAssociation
-    range: InformationBiomacromoleculeTermObject
-  type:
-    name: type
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    designates_type: true
-    alias: type
-    owner: EnabledByAssociation
-    domain_of:
-    - Association
-    - Object
-    range: string
-  evidence:
-    name: evidence
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    multivalued: true
-    alias: evidence
-    owner: EnabledByAssociation
-    domain_of:
-    - Association
-    range: EvidenceItem
-    inlined: true
-  provenances:
-    name: provenances
-    from_schema: https://w3id.org/gocam
-    multivalued: true
-    alias: provenances
-    owner: EnabledByAssociation
-    domain_of:
-    - Model
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-    range: ProvenanceInfo
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- - - - \ No newline at end of file diff --git a/pr-preview/pr-10/EnabledByGeneProductAssociation/index.html b/pr-preview/pr-10/EnabledByGeneProductAssociation/index.html deleted file mode 100644 index 228a695..0000000 --- a/pr-preview/pr-10/EnabledByGeneProductAssociation/index.html +++ /dev/null @@ -1,425 +0,0 @@ - - - - - - - - - - -Class: EnabledByGeneProductAssociation - gocam - - - - - - - - - - - -
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Class: EnabledByGeneProductAssociation

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An association between an activity and a gene product

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URI: gocam:EnabledByGeneProductAssociation

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classDiagram - class EnabledByGeneProductAssociation - click EnabledByGeneProductAssociation href "../EnabledByGeneProductAssociation" - EnabledByAssociation <|-- EnabledByGeneProductAssociation - click EnabledByAssociation href "../EnabledByAssociation" - - EnabledByGeneProductAssociation : evidence - - - - - EnabledByGeneProductAssociation --> "*" EvidenceItem : evidence - click EvidenceItem href "../EvidenceItem" - - - EnabledByGeneProductAssociation : provenances - - - - - EnabledByGeneProductAssociation --> "*" ProvenanceInfo : provenances - click ProvenanceInfo href "../ProvenanceInfo" - - - EnabledByGeneProductAssociation : term - - - - - EnabledByGeneProductAssociation --> "0..1" GeneProductTermObject : term - click GeneProductTermObject href "../GeneProductTermObject" - - - EnabledByGeneProductAssociation : type - - -
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Inheritance

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NameCardinality and RangeDescriptionInheritance
term0..1
GeneProductTermObject		The gene product or complex that carries out the activityEnabledByAssociation
type0..1
String		Association
evidence*
EvidenceItem		Association
provenances*
ProvenanceInfo		Association
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Identifier and Mapping Information

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Mapping TypeMapped Value
selfgocam:EnabledByGeneProductAssociation
nativegocam:EnabledByGeneProductAssociation
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Direct

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name: EnabledByGeneProductAssociation
-description: An association between an activity and a gene product
-from_schema: https://w3id.org/gocam
-is_a: EnabledByAssociation
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-  term:
-    name: term
-    domain_of:
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-    - EnabledByAssociation
-    - TermAssociation
-    range: GeneProductTermObject
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Induced

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name: EnabledByGeneProductAssociation
-description: An association between an activity and a gene product
-from_schema: https://w3id.org/gocam
-is_a: EnabledByAssociation
-slot_usage:
-  term:
-    name: term
-    domain_of:
-    - EvidenceItem
-    - EnabledByAssociation
-    - TermAssociation
-    range: GeneProductTermObject
-attributes:
-  term:
-    name: term
-    description: The gene product or complex that carries out the activity
-    from_schema: https://w3id.org/gocam
-    alias: term
-    owner: EnabledByGeneProductAssociation
-    domain_of:
-    - EvidenceItem
-    - EnabledByAssociation
-    - TermAssociation
-    range: GeneProductTermObject
-  type:
-    name: type
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    designates_type: true
-    alias: type
-    owner: EnabledByGeneProductAssociation
-    domain_of:
-    - Association
-    - Object
-    range: string
-  evidence:
-    name: evidence
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    multivalued: true
-    alias: evidence
-    owner: EnabledByGeneProductAssociation
-    domain_of:
-    - Association
-    range: EvidenceItem
-    inlined: true
-  provenances:
-    name: provenances
-    from_schema: https://w3id.org/gocam
-    multivalued: true
-    alias: provenances
-    owner: EnabledByGeneProductAssociation
-    domain_of:
-    - Model
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-    range: ProvenanceInfo
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- - - - \ No newline at end of file diff --git a/pr-preview/pr-10/EnabledByProteinComplexAssociation/index.html b/pr-preview/pr-10/EnabledByProteinComplexAssociation/index.html deleted file mode 100644 index adb80a6..0000000 --- a/pr-preview/pr-10/EnabledByProteinComplexAssociation/index.html +++ /dev/null @@ -1,461 +0,0 @@ - - - - - - - - - - -Class: EnabledByProteinComplexAssociation - gocam - - - - - - - - - - - -
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Class: EnabledByProteinComplexAssociation

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An association between an activity and a protein complex

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URI: gocam:EnabledByProteinComplexAssociation

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classDiagram - class EnabledByProteinComplexAssociation - click EnabledByProteinComplexAssociation href "../EnabledByProteinComplexAssociation" - EnabledByAssociation <|-- EnabledByProteinComplexAssociation - click EnabledByAssociation href "../EnabledByAssociation" - - EnabledByProteinComplexAssociation : evidence - - - - - EnabledByProteinComplexAssociation --> "*" EvidenceItem : evidence - click EvidenceItem href "../EvidenceItem" - - - EnabledByProteinComplexAssociation : members - - - - - EnabledByProteinComplexAssociation --> "*" GeneProductTermObject : members - click GeneProductTermObject href "../GeneProductTermObject" - - - EnabledByProteinComplexAssociation : provenances - - - - - EnabledByProteinComplexAssociation --> "*" ProvenanceInfo : provenances - click ProvenanceInfo href "../ProvenanceInfo" - - - EnabledByProteinComplexAssociation : term - - - - - EnabledByProteinComplexAssociation --> "0..1" ProteinComplexTermObject : term - click ProteinComplexTermObject href "../ProteinComplexTermObject" - - - EnabledByProteinComplexAssociation : type - - -
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Inheritance

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Slots

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NameCardinality and RangeDescriptionInheritance
members*
GeneProductTermObject		The gene products that are part of the complexdirect
term0..1
ProteinComplexTermObject		The gene product or complex that carries out the activityEnabledByAssociation
type0..1
String		Association
evidence*
EvidenceItem		Association
provenances*
ProvenanceInfo		Association
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Identifier and Mapping Information

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Schema Source

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Mapping TypeMapped Value
selfgocam:EnabledByProteinComplexAssociation
nativegocam:EnabledByProteinComplexAssociation
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LinkML Source

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Direct

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name: EnabledByProteinComplexAssociation
-description: An association between an activity and a protein complex
-from_schema: https://w3id.org/gocam
-is_a: EnabledByAssociation
-slot_usage:
-  term:
-    name: term
-    domain_of:
-    - EvidenceItem
-    - EnabledByAssociation
-    - TermAssociation
-    range: ProteinComplexTermObject
-attributes:
-  members:
-    name: members
-    description: The gene products that are part of the complex
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    multivalued: true
-    domain_of:
-    - EnabledByProteinComplexAssociation
-    range: GeneProductTermObject
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Induced

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name: EnabledByProteinComplexAssociation
-description: An association between an activity and a protein complex
-from_schema: https://w3id.org/gocam
-is_a: EnabledByAssociation
-slot_usage:
-  term:
-    name: term
-    domain_of:
-    - EvidenceItem
-    - EnabledByAssociation
-    - TermAssociation
-    range: ProteinComplexTermObject
-attributes:
-  members:
-    name: members
-    description: The gene products that are part of the complex
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    multivalued: true
-    alias: members
-    owner: EnabledByProteinComplexAssociation
-    domain_of:
-    - EnabledByProteinComplexAssociation
-    range: GeneProductTermObject
-  term:
-    name: term
-    description: The gene product or complex that carries out the activity
-    from_schema: https://w3id.org/gocam
-    alias: term
-    owner: EnabledByProteinComplexAssociation
-    domain_of:
-    - EvidenceItem
-    - EnabledByAssociation
-    - TermAssociation
-    range: ProteinComplexTermObject
-  type:
-    name: type
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    designates_type: true
-    alias: type
-    owner: EnabledByProteinComplexAssociation
-    domain_of:
-    - Association
-    - Object
-    range: string
-  evidence:
-    name: evidence
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    multivalued: true
-    alias: evidence
-    owner: EnabledByProteinComplexAssociation
-    domain_of:
-    - Association
-    range: EvidenceItem
-    inlined: true
-  provenances:
-    name: provenances
-    from_schema: https://w3id.org/gocam
-    multivalued: true
-    alias: provenances
-    owner: EnabledByProteinComplexAssociation
-    domain_of:
-    - Model
-    - Activity
-    - EvidenceItem
-    - Association
-    range: ProvenanceInfo
-    inlined: true
-    inlined_as_list: true
-
-
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-
- -
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- - - - \ No newline at end of file diff --git a/pr-preview/pr-10/EvidenceItem/index.html b/pr-preview/pr-10/EvidenceItem/index.html deleted file mode 100644 index bf64304..0000000 --- a/pr-preview/pr-10/EvidenceItem/index.html +++ /dev/null @@ -1,537 +0,0 @@ - - - - - - - - - - -Class: EvidenceItem - gocam - - - - - - - - - - - -
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- - - -

Class: EvidenceItem

-

An individual piece of evidence that is associated with an assertion in a model

-

URI: gocam:EvidenceItem

-
classDiagram - class EvidenceItem - click EvidenceItem href "../EvidenceItem" - EvidenceItem : provenances - - - - - EvidenceItem --> "*" ProvenanceInfo : provenances - click ProvenanceInfo href "../ProvenanceInfo" - - - EvidenceItem : reference - - - - - EvidenceItem --> "0..1" PublicationObject : reference - click PublicationObject href "../PublicationObject" - - - EvidenceItem : term - - - - - EvidenceItem --> "0..1" EvidenceTermObject : term - click EvidenceTermObject href "../EvidenceTermObject" - - - EvidenceItem : with_objects - - - - - EvidenceItem --> "*" Object : with_objects - click Object href "../Object" - - - -
- -

Slots

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
NameCardinality and RangeDescriptionInheritance
term0..1
EvidenceTermObject		The ECO term representing the type of evidencedirect
reference0..1
PublicationObject		The publication of reference that describes the evidencedirect
with_objects*
Object		Supporting database entities or termsdirect
provenances*
ProvenanceInfo		Provenance about the assertion, edirect
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Usages

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used byused intypeused
AssociationevidencerangeEvidenceItem
EnabledByAssociationevidencerangeEvidenceItem
EnabledByGeneProductAssociationevidencerangeEvidenceItem
EnabledByProteinComplexAssociationevidencerangeEvidenceItem
CausalAssociationevidencerangeEvidenceItem
TermAssociationevidencerangeEvidenceItem
MolecularFunctionAssociationevidencerangeEvidenceItem
BiologicalProcessAssociationevidencerangeEvidenceItem
CellularAnatomicalEntityAssociationevidencerangeEvidenceItem
CellTypeAssociationevidencerangeEvidenceItem
GrossAnatomyAssociationevidencerangeEvidenceItem
MoleculeAssociationevidencerangeEvidenceItem
-

Identifier and Mapping Information

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Schema Source

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Mappings

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Mapping TypeMapped Value
selfgocam:EvidenceItem
nativegocam:EvidenceItem
-

LinkML Source

- -

Direct

-
-
name: EvidenceItem
-description: An individual piece of evidence that is associated with an assertion
-  in a model
-from_schema: https://w3id.org/gocam
-attributes:
-  term:
-    name: term
-    description: The ECO term representing the type of evidence
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    domain_of:
-    - EvidenceItem
-    - EnabledByAssociation
-    - TermAssociation
-    range: EvidenceTermObject
-  reference:
-    name: reference
-    description: The publication of reference that describes the evidence
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    domain_of:
-    - EvidenceItem
-    range: PublicationObject
-  with_objects:
-    name: with_objects
-    description: Supporting database entities or terms
-    from_schema: https://w3id.org/gocam
-    aliases:
-    - with
-    - with/from
-    rank: 1000
-    multivalued: true
-    domain_of:
-    - EvidenceItem
-    range: Object
-  provenances:
-    name: provenances
-    description: Provenance about the assertion, e.g. who made it
-    from_schema: https://w3id.org/gocam
-    multivalued: true
-    domain_of:
-    - Model
-    - Activity
-    - EvidenceItem
-    - Association
-    range: ProvenanceInfo
-    inlined: true
-    inlined_as_list: true
-
-
-
-

Induced

-
-
name: EvidenceItem
-description: An individual piece of evidence that is associated with an assertion
-  in a model
-from_schema: https://w3id.org/gocam
-attributes:
-  term:
-    name: term
-    description: The ECO term representing the type of evidence
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    alias: term
-    owner: EvidenceItem
-    domain_of:
-    - EvidenceItem
-    - EnabledByAssociation
-    - TermAssociation
-    range: EvidenceTermObject
-  reference:
-    name: reference
-    description: The publication of reference that describes the evidence
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    alias: reference
-    owner: EvidenceItem
-    domain_of:
-    - EvidenceItem
-    range: PublicationObject
-  with_objects:
-    name: with_objects
-    description: Supporting database entities or terms
-    from_schema: https://w3id.org/gocam
-    aliases:
-    - with
-    - with/from
-    rank: 1000
-    multivalued: true
-    alias: with_objects
-    owner: EvidenceItem
-    domain_of:
-    - EvidenceItem
-    range: Object
-  provenances:
-    name: provenances
-    description: Provenance about the assertion, e.g. who made it
-    from_schema: https://w3id.org/gocam
-    multivalued: true
-    alias: provenances
-    owner: EvidenceItem
-    domain_of:
-    - Model
-    - Activity
-    - EvidenceItem
-    - Association
-    range: ProvenanceInfo
-    inlined: true
-    inlined_as_list: true
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- - - - \ No newline at end of file diff --git a/pr-preview/pr-10/EvidenceTermObject/index.html b/pr-preview/pr-10/EvidenceTermObject/index.html deleted file mode 100644 index 819e745..0000000 --- a/pr-preview/pr-10/EvidenceTermObject/index.html +++ /dev/null @@ -1,420 +0,0 @@ - - - - - - - - - - -Class: EvidenceTermObject - gocam - - - - - - - - - - - -
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Class: EvidenceTermObject

-

A term object that represents an evidence term from ECO

-

URI: gocam:EvidenceTermObject

-
classDiagram - class EvidenceTermObject - click EvidenceTermObject href "../EvidenceTermObject" - TermObject <|-- EvidenceTermObject - click TermObject href "../TermObject" - - EvidenceTermObject : id - - EvidenceTermObject : label - - EvidenceTermObject : obsolete - - EvidenceTermObject : type - - -
-

Inheritance

- -

Slots

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
NameCardinality and RangeDescriptionInheritance
id1
Uriorcurie		Object
label0..1
String		Object
type0..1
Uriorcurie		Object
obsolete0..1
Boolean		Object
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Usages

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used byused intypeused
EvidenceItemtermrangeEvidenceTermObject
-

Identifier and Mapping Information

-

Valid ID Prefixes

-

Instances of this class should have identifiers with one of the following prefixes:

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    -
  • ECO
    • -
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Schema Source

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    • -
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Mappings

- - - - - - - - - - - - - - - - - -
Mapping TypeMapped Value
selfgocam:EvidenceTermObject
nativegocam:EvidenceTermObject
-

LinkML Source

- -

Direct

-
-
name: EvidenceTermObject
-id_prefixes:
-- ECO
-description: A term object that represents an evidence term from ECO
-from_schema: https://w3id.org/gocam
-is_a: TermObject
-
-
-
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Induced

-
-
name: EvidenceTermObject
-id_prefixes:
-- ECO
-description: A term object that represents an evidence term from ECO
-from_schema: https://w3id.org/gocam
-is_a: TermObject
-attributes:
-  id:
-    name: id
-    from_schema: https://w3id.org/gocam
-    identifier: true
-    alias: id
-    owner: EvidenceTermObject
-    domain_of:
-    - Model
-    - Activity
-    - Object
-    range: uriorcurie
-    required: true
-  label:
-    name: label
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    slot_uri: rdfs:label
-    alias: label
-    owner: EvidenceTermObject
-    domain_of:
-    - Object
-    range: string
-  type:
-    name: type
-    from_schema: https://w3id.org/gocam
-    designates_type: true
-    alias: type
-    owner: EvidenceTermObject
-    domain_of:
-    - Association
-    - Object
-    range: uriorcurie
-  obsolete:
-    name: obsolete
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    alias: obsolete
-    owner: EvidenceTermObject
-    domain_of:
-    - Object
-    range: boolean
-
-
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- -
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- - - - \ No newline at end of file diff --git a/pr-preview/pr-10/Float/index.html b/pr-preview/pr-10/Float/index.html deleted file mode 100644 index 7d10d25..0000000 --- a/pr-preview/pr-10/Float/index.html +++ /dev/null @@ -1,361 +0,0 @@ - - - - - - - - - - - - - - - - - - Type: Float - gocam - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
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Type: Float

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A real number that conforms to the xsd:float specification

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URI: xsd:float

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    uri: xsd:float

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Identifier and Mapping Information

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Schema Source

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- - - - - - - - - - \ No newline at end of file diff --git a/pr-preview/pr-10/GeneProductTermObject/index.html b/pr-preview/pr-10/GeneProductTermObject/index.html deleted file mode 100644 index 279baff..0000000 --- a/pr-preview/pr-10/GeneProductTermObject/index.html +++ /dev/null @@ -1,415 +0,0 @@ - - - - - - - - - - -Class: GeneProductTermObject - gocam - - - - - - - - - - - -
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Class: GeneProductTermObject

-

A term object that represents a gene product term from GO or UniProtKB

-

URI: gocam:GeneProductTermObject

-
classDiagram - class GeneProductTermObject - click GeneProductTermObject href "../GeneProductTermObject" - InformationBiomacromoleculeTermObject <|-- GeneProductTermObject - click InformationBiomacromoleculeTermObject href "../InformationBiomacromoleculeTermObject" - - GeneProductTermObject : id - - GeneProductTermObject : label - - GeneProductTermObject : obsolete - - GeneProductTermObject : type - - -
-

Inheritance

- -

Slots

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
NameCardinality and RangeDescriptionInheritance
id1
Uriorcurie		Object
label0..1
String		Object
type0..1
Uriorcurie		Object
obsolete0..1
Boolean		Object
-

Usages

- - - - - - - - - - - - - - - - - - - - - - - -
used byused intypeused
EnabledByGeneProductAssociationtermrangeGeneProductTermObject
EnabledByProteinComplexAssociationmembersrangeGeneProductTermObject
-

Identifier and Mapping Information

-

Schema Source

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  • from schema: https://w3id.org/gocam
    • -
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Mappings

- - - - - - - - - - - - - - - - - -
Mapping TypeMapped Value
selfgocam:GeneProductTermObject
nativegocam:GeneProductTermObject
-

LinkML Source

- -

Direct

-
-
name: GeneProductTermObject
-description: A term object that represents a gene product term from GO or UniProtKB
-from_schema: https://w3id.org/gocam
-is_a: InformationBiomacromoleculeTermObject
-
-
-
-

Induced

-
-
name: GeneProductTermObject
-description: A term object that represents a gene product term from GO or UniProtKB
-from_schema: https://w3id.org/gocam
-is_a: InformationBiomacromoleculeTermObject
-attributes:
-  id:
-    name: id
-    from_schema: https://w3id.org/gocam
-    identifier: true
-    alias: id
-    owner: GeneProductTermObject
-    domain_of:
-    - Model
-    - Activity
-    - Object
-    range: uriorcurie
-    required: true
-  label:
-    name: label
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    slot_uri: rdfs:label
-    alias: label
-    owner: GeneProductTermObject
-    domain_of:
-    - Object
-    range: string
-  type:
-    name: type
-    from_schema: https://w3id.org/gocam
-    designates_type: true
-    alias: type
-    owner: GeneProductTermObject
-    domain_of:
-    - Association
-    - Object
-    range: uriorcurie
-  obsolete:
-    name: obsolete
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    alias: obsolete
-    owner: GeneProductTermObject
-    domain_of:
-    - Object
-    range: boolean
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- -
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- - - - \ No newline at end of file diff --git a/pr-preview/pr-10/GrossAnatomicalStructureTermObject/index.html b/pr-preview/pr-10/GrossAnatomicalStructureTermObject/index.html deleted file mode 100644 index 88a2262..0000000 --- a/pr-preview/pr-10/GrossAnatomicalStructureTermObject/index.html +++ /dev/null @@ -1,439 +0,0 @@ - - - - - - - - - - -Class: GrossAnatomicalStructureTermObject - gocam - - - - - - - - - - - -
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Class: GrossAnatomicalStructureTermObject

-

A term object that represents a gross anatomical structure term from UBERON

-

URI: gocam:GrossAnatomicalStructureTermObject

-
classDiagram - class GrossAnatomicalStructureTermObject - click GrossAnatomicalStructureTermObject href "../GrossAnatomicalStructureTermObject" - TermObject <|-- GrossAnatomicalStructureTermObject - click TermObject href "../TermObject" - - GrossAnatomicalStructureTermObject : id - - GrossAnatomicalStructureTermObject : label - - GrossAnatomicalStructureTermObject : obsolete - - GrossAnatomicalStructureTermObject : type - - -
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Inheritance

- -

Slots

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
NameCardinality and RangeDescriptionInheritance
id1
Uriorcurie		Object
label0..1
String		Object
type0..1
Uriorcurie		Object
obsolete0..1
Boolean		Object
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Usages

- - - - - - - - - - - - - - - - - -
used byused intypeused
GrossAnatomyAssociationtermrangeGrossAnatomicalStructureTermObject
-

Identifier and Mapping Information

-

Valid ID Prefixes

-

Instances of this class should have identifiers with one of the following prefixes:

-
    -
  • -

    UBERON

    -
    • -
  • -

    PO

    -
    • -
  • -

    FAO

    -
    • -
  • -

    DDANAT

    -
    • -
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Schema Source

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    • -
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Mappings

- - - - - - - - - - - - - - - - - -
Mapping TypeMapped Value
selfgocam:GrossAnatomicalStructureTermObject
nativegocam:GrossAnatomicalStructureTermObject
-

LinkML Source

- -

Direct

-
-
name: GrossAnatomicalStructureTermObject
-id_prefixes:
-- UBERON
-- PO
-- FAO
-- DDANAT
-description: A term object that represents a gross anatomical structure term from
-  UBERON
-from_schema: https://w3id.org/gocam
-is_a: TermObject
-
-
-
-

Induced

-
-
name: GrossAnatomicalStructureTermObject
-id_prefixes:
-- UBERON
-- PO
-- FAO
-- DDANAT
-description: A term object that represents a gross anatomical structure term from
-  UBERON
-from_schema: https://w3id.org/gocam
-is_a: TermObject
-attributes:
-  id:
-    name: id
-    from_schema: https://w3id.org/gocam
-    identifier: true
-    alias: id
-    owner: GrossAnatomicalStructureTermObject
-    domain_of:
-    - Model
-    - Activity
-    - Object
-    range: uriorcurie
-    required: true
-  label:
-    name: label
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    slot_uri: rdfs:label
-    alias: label
-    owner: GrossAnatomicalStructureTermObject
-    domain_of:
-    - Object
-    range: string
-  type:
-    name: type
-    from_schema: https://w3id.org/gocam
-    designates_type: true
-    alias: type
-    owner: GrossAnatomicalStructureTermObject
-    domain_of:
-    - Association
-    - Object
-    range: uriorcurie
-  obsolete:
-    name: obsolete
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    alias: obsolete
-    owner: GrossAnatomicalStructureTermObject
-    domain_of:
-    - Object
-    range: boolean
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-
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- -
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- -
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- - - - \ No newline at end of file diff --git a/pr-preview/pr-10/GrossAnatomyAssociation/index.html b/pr-preview/pr-10/GrossAnatomyAssociation/index.html deleted file mode 100644 index 3eb7a01..0000000 --- a/pr-preview/pr-10/GrossAnatomyAssociation/index.html +++ /dev/null @@ -1,431 +0,0 @@ - - - - - - - - - - -Class: GrossAnatomyAssociation - gocam - - - - - - - - - - - -
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Class: GrossAnatomyAssociation

-

An association between an activity and a gross anatomical structure term

-

URI: gocam:GrossAnatomyAssociation

-
classDiagram - class GrossAnatomyAssociation - click GrossAnatomyAssociation href "../GrossAnatomyAssociation" - TermAssociation <|-- GrossAnatomyAssociation - click TermAssociation href "../TermAssociation" - - GrossAnatomyAssociation : evidence - - - - - GrossAnatomyAssociation --> "*" EvidenceItem : evidence - click EvidenceItem href "../EvidenceItem" - - - GrossAnatomyAssociation : provenances - - - - - GrossAnatomyAssociation --> "*" ProvenanceInfo : provenances - click ProvenanceInfo href "../ProvenanceInfo" - - - GrossAnatomyAssociation : term - - - - - GrossAnatomyAssociation --> "0..1" GrossAnatomicalStructureTermObject : term - click GrossAnatomicalStructureTermObject href "../GrossAnatomicalStructureTermObject" - - - GrossAnatomyAssociation : type - - -
-

Inheritance

- -

Slots

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
NameCardinality and RangeDescriptionInheritance
term0..1
GrossAnatomicalStructureTermObject		The ontology term that describes the nature of the associationTermAssociation
type0..1
String		Association
evidence*
EvidenceItem		Association
provenances*
ProvenanceInfo		Association
-

Identifier and Mapping Information

-

Schema Source

-
    -
  • from schema: https://w3id.org/gocam
    • -
-

Mappings

- - - - - - - - - - - - - - - - - -
Mapping TypeMapped Value
selfgocam:GrossAnatomyAssociation
nativegocam:GrossAnatomyAssociation
-

LinkML Source

- -

Direct

-
-
name: GrossAnatomyAssociation
-description: An association between an activity and a gross anatomical structure term
-from_schema: https://w3id.org/gocam
-is_a: TermAssociation
-slot_usage:
-  term:
-    name: term
-    domain_of:
-    - EvidenceItem
-    - EnabledByAssociation
-    - TermAssociation
-    range: GrossAnatomicalStructureTermObject
-  part_of:
-    name: part_of
-    range: GrossAnatomyAssociation
-
-
-
-

Induced

-
-
name: GrossAnatomyAssociation
-description: An association between an activity and a gross anatomical structure term
-from_schema: https://w3id.org/gocam
-is_a: TermAssociation
-slot_usage:
-  term:
-    name: term
-    domain_of:
-    - EvidenceItem
-    - EnabledByAssociation
-    - TermAssociation
-    range: GrossAnatomicalStructureTermObject
-  part_of:
-    name: part_of
-    range: GrossAnatomyAssociation
-attributes:
-  term:
-    name: term
-    description: The ontology term that describes the nature of the association
-    from_schema: https://w3id.org/gocam
-    alias: term
-    owner: GrossAnatomyAssociation
-    domain_of:
-    - EvidenceItem
-    - EnabledByAssociation
-    - TermAssociation
-    range: GrossAnatomicalStructureTermObject
-  type:
-    name: type
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    designates_type: true
-    alias: type
-    owner: GrossAnatomyAssociation
-    domain_of:
-    - Association
-    - Object
-    range: string
-  evidence:
-    name: evidence
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    multivalued: true
-    alias: evidence
-    owner: GrossAnatomyAssociation
-    domain_of:
-    - Association
-    range: EvidenceItem
-    inlined: true
-  provenances:
-    name: provenances
-    from_schema: https://w3id.org/gocam
-    multivalued: true
-    alias: provenances
-    owner: GrossAnatomyAssociation
-    domain_of:
-    - Model
-    - Activity
-    - EvidenceItem
-    - Association
-    range: ProvenanceInfo
-    inlined: true
-    inlined_as_list: true
-
-
-
-
-
- -
-
- -
-
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- - - - \ No newline at end of file diff --git a/pr-preview/pr-10/InformationBiomacromoleculeCategory/index.html b/pr-preview/pr-10/InformationBiomacromoleculeCategory/index.html deleted file mode 100644 index c55f990..0000000 --- a/pr-preview/pr-10/InformationBiomacromoleculeCategory/index.html +++ /dev/null @@ -1,418 +0,0 @@ - - - - - - - - - - - - - - - - - - Enum: InformationBiomacromoleculeCategory - gocam - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
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Enum: InformationBiomacromoleculeCategory

-

URI: InformationBiomacromoleculeCategory

-

Permissible Values

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
ValueMeaningDescription
GeneOrReferenceProteinbiolink.GeneOrGeneProduct
ProteinIsoformNone
MacromolecularComplexNone
UnknownNone
-

Identifier and Mapping Information

-

Schema Source

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name: InformationBiomacromoleculeCategory
-from_schema: https://w3id.org/gocam
-rank: 1000
-permissible_values:
-  GeneOrReferenceProtein:
-    text: GeneOrReferenceProtein
-    meaning: biolink.GeneOrGeneProduct
-  ProteinIsoform:
-    text: ProteinIsoform
-  MacromolecularComplex:
-    text: MacromolecularComplex
-  Unknown:
-    text: Unknown
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Class: InformationBiomacromoleculeTermObject

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An abstract class for all information biomacromolecule term objects

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  • NOTE: this is an abstract class and should not be instantiated directly
    • -
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URI: gocam:InformationBiomacromoleculeTermObject

-
classDiagram - class InformationBiomacromoleculeTermObject - click InformationBiomacromoleculeTermObject href "../InformationBiomacromoleculeTermObject" - TermObject <|-- InformationBiomacromoleculeTermObject - click TermObject href "../TermObject" - - - InformationBiomacromoleculeTermObject <|-- GeneProductTermObject - click GeneProductTermObject href "../GeneProductTermObject" - InformationBiomacromoleculeTermObject <|-- ProteinComplexTermObject - click ProteinComplexTermObject href "../ProteinComplexTermObject" - - - InformationBiomacromoleculeTermObject : id - - InformationBiomacromoleculeTermObject : label - - InformationBiomacromoleculeTermObject : obsolete - - InformationBiomacromoleculeTermObject : type - - -
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NameCardinality and RangeDescriptionInheritance
id1
Uriorcurie		Object
label0..1
String		Object
type0..1
Uriorcurie		Object
obsolete0..1
Boolean		Object
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used byused intypeused
EnabledByAssociationtermrangeInformationBiomacromoleculeTermObject
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Identifier and Mapping Information

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Schema Source

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Mapping TypeMapped Value
selfgocam:InformationBiomacromoleculeTermObject
nativegocam:InformationBiomacromoleculeTermObject
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LinkML Source

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Direct

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-
name: InformationBiomacromoleculeTermObject
-description: An abstract class for all information biomacromolecule term objects
-from_schema: https://w3id.org/gocam
-is_a: TermObject
-abstract: true
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Induced

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name: InformationBiomacromoleculeTermObject
-description: An abstract class for all information biomacromolecule term objects
-from_schema: https://w3id.org/gocam
-is_a: TermObject
-abstract: true
-attributes:
-  id:
-    name: id
-    from_schema: https://w3id.org/gocam
-    identifier: true
-    alias: id
-    owner: InformationBiomacromoleculeTermObject
-    domain_of:
-    - Model
-    - Activity
-    - Object
-    range: uriorcurie
-    required: true
-  label:
-    name: label
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    slot_uri: rdfs:label
-    alias: label
-    owner: InformationBiomacromoleculeTermObject
-    domain_of:
-    - Object
-    range: string
-  type:
-    name: type
-    from_schema: https://w3id.org/gocam
-    designates_type: true
-    alias: type
-    owner: InformationBiomacromoleculeTermObject
-    domain_of:
-    - Association
-    - Object
-    range: uriorcurie
-  obsolete:
-    name: obsolete
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    alias: obsolete
-    owner: InformationBiomacromoleculeTermObject
-    domain_of:
-    - Object
-    range: boolean
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Type: Integer

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An integer

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URI: xsd:integer

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Identifier and Mapping Information

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Schema Source

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Type: Jsonpath

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A string encoding a JSON Path. The value of the string MUST conform to JSON Point syntax and SHOULD dereference to zero or more valid objects within the current instance document when encoded in tree form.

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URI: xsd:string

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Identifier and Mapping Information

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Schema Source

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Type: Jsonpointer

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A string encoding a JSON Pointer. The value of the string MUST conform to JSON Point syntax and SHOULD dereference to a valid object within the current instance document when encoded in tree form.

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URI: xsd:string

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Identifier and Mapping Information

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Schema Source

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Class: Model

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A model of a biological program consisting of a set of causally connected activities

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URI: gocam:Model

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classDiagram - class Model - click Model href "../Model" - Model : activities - - - - - Model --> "*" Activity : activities - click Activity href "../Activity" - - - Model : comments - - Model : id - - Model : objects - - - - - Model --> "*" Object : objects - click Object href "../Object" - - - Model : provenances - - - - - Model --> "*" ProvenanceInfo : provenances - click ProvenanceInfo href "../ProvenanceInfo" - - - Model : status - - - - - Model --> "0..1" ModelStateEnum : status - click ModelStateEnum href "../ModelStateEnum" - - - Model : taxon - - - - - Model --> "0..1" TaxonTermObject : taxon - click TaxonTermObject href "../TaxonTermObject" - - - Model : title - - -
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id1
Uriorcurie		The identifier of the modeldirect
title0..1
String		The human-readable descriptive title of the modeldirect
taxon0..1
TaxonTermObject		The primary taxon that the model is aboutdirect
status0..1
ModelStateEnum		The status of the modeldirect
comments*
String		Comments about the modeldirect
activities*
Activity		All of the activities that are part of the modeldirect
objects*
Object		All of the objects that are part of the modeldirect
provenances*
ProvenanceInfo		Model-level provenance informationdirect
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Identifier and Mapping Information

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Mapping TypeMapped Value
selfgocam:Model
nativegocam:Model
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LinkML Source

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Direct

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name: Model
-description: A model of a biological program consisting of a set of causally connected
-  activities
-from_schema: https://w3id.org/gocam
-attributes:
-  id:
-    name: id
-    description: The identifier of the model. Should be in gocam namespace.
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    identifier: true
-    domain_of:
-    - Model
-    - Activity
-    - Object
-    range: uriorcurie
-    required: true
-  title:
-    name: title
-    description: The human-readable descriptive title of the model
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    slot_uri: dct:title
-    domain_of:
-    - Model
-  taxon:
-    name: taxon
-    description: The primary taxon that the model is about
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    domain_of:
-    - Model
-    range: TaxonTermObject
-  status:
-    name: status
-    description: The status of the model
-    from_schema: https://w3id.org/gocam
-    aliases:
-    - model state
-    rank: 1000
-    slot_uri: pav:status
-    domain_of:
-    - Model
-    range: ModelStateEnum
-  comments:
-    name: comments
-    description: Comments about the model
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    slot_uri: rdfs:comment
-    multivalued: true
-    domain_of:
-    - Model
-  activities:
-    name: activities
-    description: All of the activities that are part of the model
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    multivalued: true
-    domain_of:
-    - Model
-    range: Activity
-    inlined: true
-    inlined_as_list: true
-  objects:
-    name: objects
-    description: All of the objects that are part of the model. This includes terms
-      as well as publications and database objects like gene. This is not strictly
-      part of the data managed by the model, it is for convenience, and should be
-      refreshed from outside.
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    multivalued: true
-    domain_of:
-    - Model
-    range: Object
-    inlined: true
-    inlined_as_list: true
-  provenances:
-    name: provenances
-    description: Model-level provenance information
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    multivalued: true
-    domain_of:
-    - Model
-    - Activity
-    - EvidenceItem
-    - Association
-    range: ProvenanceInfo
-    inlined: true
-    inlined_as_list: true
-
-
-
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Induced

-
-
name: Model
-description: A model of a biological program consisting of a set of causally connected
-  activities
-from_schema: https://w3id.org/gocam
-attributes:
-  id:
-    name: id
-    description: The identifier of the model. Should be in gocam namespace.
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    identifier: true
-    alias: id
-    owner: Model
-    domain_of:
-    - Model
-    - Activity
-    - Object
-    range: uriorcurie
-  title:
-    name: title
-    description: The human-readable descriptive title of the model
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    slot_uri: dct:title
-    alias: title
-    owner: Model
-    domain_of:
-    - Model
-    range: string
-  taxon:
-    name: taxon
-    description: The primary taxon that the model is about
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    alias: taxon
-    owner: Model
-    domain_of:
-    - Model
-    range: TaxonTermObject
-  status:
-    name: status
-    description: The status of the model
-    from_schema: https://w3id.org/gocam
-    aliases:
-    - model state
-    rank: 1000
-    slot_uri: pav:status
-    alias: status
-    owner: Model
-    domain_of:
-    - Model
-    range: ModelStateEnum
-  comments:
-    name: comments
-    description: Comments about the model
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    slot_uri: rdfs:comment
-    multivalued: true
-    alias: comments
-    owner: Model
-    domain_of:
-    - Model
-    range: string
-  activities:
-    name: activities
-    description: All of the activities that are part of the model
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    multivalued: true
-    alias: activities
-    owner: Model
-    domain_of:
-    - Model
-    range: Activity
-    inlined_as_list: true
-  objects:
-    name: objects
-    description: All of the objects that are part of the model. This includes terms
-      as well as publications and database objects like gene. This is not strictly
-      part of the data managed by the model, it is for convenience, and should be
-      refreshed from outside.
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    multivalued: true
-    alias: objects
-    owner: Model
-    domain_of:
-    - Model
-    range: Object
-    inlined_as_list: true
-  provenances:
-    name: provenances
-    description: Model-level provenance information
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    multivalued: true
-    alias: provenances
-    owner: Model
-    domain_of:
-    - Model
-    - Activity
-    - EvidenceItem
-    - Association
-    range: ProvenanceInfo
-    inlined_as_list: true
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Enum: ModelStateEnum

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Status of a model

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URI: ModelStateEnum

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Permissible Values

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ValueMeaningDescription
productionNone
developmentNone
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Slots

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NameDescription
statusThe status of the model
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Identifier and Mapping Information

-

Schema Source

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LinkML Source

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name: ModelStateEnum
-description: Status of a model
-from_schema: https://w3id.org/gocam
-rank: 1000
-permissible_values:
-  production:
-    text: production
-  development:
-    text: development
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Class: MolecularFunctionAssociation

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An association between an activity and a molecular function term

-

URI: gocam:MolecularFunctionAssociation

-
classDiagram - class MolecularFunctionAssociation - click MolecularFunctionAssociation href "../MolecularFunctionAssociation" - TermAssociation <|-- MolecularFunctionAssociation - click TermAssociation href "../TermAssociation" - - MolecularFunctionAssociation : evidence - - - - - MolecularFunctionAssociation --> "*" EvidenceItem : evidence - click EvidenceItem href "../EvidenceItem" - - - MolecularFunctionAssociation : provenances - - - - - MolecularFunctionAssociation --> "*" ProvenanceInfo : provenances - click ProvenanceInfo href "../ProvenanceInfo" - - - MolecularFunctionAssociation : term - - - - - MolecularFunctionAssociation --> "0..1" MolecularFunctionTermObject : term - click MolecularFunctionTermObject href "../MolecularFunctionTermObject" - - - MolecularFunctionAssociation : type - - -
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Inheritance

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NameCardinality and RangeDescriptionInheritance
term0..1
MolecularFunctionTermObject		The ontology term that describes the nature of the associationTermAssociation
type0..1
String		Association
evidence*
EvidenceItem		Association
provenances*
ProvenanceInfo		Association
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Usages

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Activitymolecular_functionrangeMolecularFunctionAssociation
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Identifier and Mapping Information

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Schema Source

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Mapping TypeMapped Value
selfgocam:MolecularFunctionAssociation
nativegocam:MolecularFunctionAssociation
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LinkML Source

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Direct

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name: MolecularFunctionAssociation
-description: An association between an activity and a molecular function term
-todos:
-- account for non-MF activity types in Reactome
-from_schema: https://w3id.org/gocam
-is_a: TermAssociation
-slot_usage:
-  term:
-    name: term
-    domain_of:
-    - EvidenceItem
-    - EnabledByAssociation
-    - TermAssociation
-    range: MolecularFunctionTermObject
-
-
-
-

Induced

-
-
name: MolecularFunctionAssociation
-description: An association between an activity and a molecular function term
-todos:
-- account for non-MF activity types in Reactome
-from_schema: https://w3id.org/gocam
-is_a: TermAssociation
-slot_usage:
-  term:
-    name: term
-    domain_of:
-    - EvidenceItem
-    - EnabledByAssociation
-    - TermAssociation
-    range: MolecularFunctionTermObject
-attributes:
-  term:
-    name: term
-    description: The ontology term that describes the nature of the association
-    from_schema: https://w3id.org/gocam
-    alias: term
-    owner: MolecularFunctionAssociation
-    domain_of:
-    - EvidenceItem
-    - EnabledByAssociation
-    - TermAssociation
-    range: MolecularFunctionTermObject
-  type:
-    name: type
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    designates_type: true
-    alias: type
-    owner: MolecularFunctionAssociation
-    domain_of:
-    - Association
-    - Object
-    range: string
-  evidence:
-    name: evidence
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    multivalued: true
-    alias: evidence
-    owner: MolecularFunctionAssociation
-    domain_of:
-    - Association
-    range: EvidenceItem
-    inlined: true
-  provenances:
-    name: provenances
-    from_schema: https://w3id.org/gocam
-    multivalued: true
-    alias: provenances
-    owner: MolecularFunctionAssociation
-    domain_of:
-    - Model
-    - Activity
-    - EvidenceItem
-    - Association
-    range: ProvenanceInfo
-    inlined: true
-    inlined_as_list: true
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Class: MolecularFunctionTermObject

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A term object that represents a molecular function term from GO

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URI: gocam:MolecularFunctionTermObject

-
classDiagram - class MolecularFunctionTermObject - click MolecularFunctionTermObject href "../MolecularFunctionTermObject" - TermObject <|-- MolecularFunctionTermObject - click TermObject href "../TermObject" - - MolecularFunctionTermObject : id - - MolecularFunctionTermObject : label - - MolecularFunctionTermObject : obsolete - - MolecularFunctionTermObject : type - - -
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NameCardinality and RangeDescriptionInheritance
id1
Uriorcurie		Object
label0..1
String		Object
type0..1
Uriorcurie		Object
obsolete0..1
Boolean		Object
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MolecularFunctionAssociationtermrangeMolecularFunctionTermObject
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Identifier and Mapping Information

-

Valid ID Prefixes

-

Instances of this class should have identifiers with one of the following prefixes:

-
    -
  • GO
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-

Schema Source

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    -
  • from schema: https://w3id.org/gocam
    • -
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Mappings

- - - - - - - - - - - - - - - - - -
Mapping TypeMapped Value
selfgocam:MolecularFunctionTermObject
nativegocam:MolecularFunctionTermObject
-

LinkML Source

- -

Direct

-
-
name: MolecularFunctionTermObject
-id_prefixes:
-- GO
-description: A term object that represents a molecular function term from GO
-from_schema: https://w3id.org/gocam
-is_a: TermObject
-
-
-
-

Induced

-
-
name: MolecularFunctionTermObject
-id_prefixes:
-- GO
-description: A term object that represents a molecular function term from GO
-from_schema: https://w3id.org/gocam
-is_a: TermObject
-attributes:
-  id:
-    name: id
-    from_schema: https://w3id.org/gocam
-    identifier: true
-    alias: id
-    owner: MolecularFunctionTermObject
-    domain_of:
-    - Model
-    - Activity
-    - Object
-    range: uriorcurie
-    required: true
-  label:
-    name: label
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    slot_uri: rdfs:label
-    alias: label
-    owner: MolecularFunctionTermObject
-    domain_of:
-    - Object
-    range: string
-  type:
-    name: type
-    from_schema: https://w3id.org/gocam
-    designates_type: true
-    alias: type
-    owner: MolecularFunctionTermObject
-    domain_of:
-    - Association
-    - Object
-    range: uriorcurie
-  obsolete:
-    name: obsolete
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    alias: obsolete
-    owner: MolecularFunctionTermObject
-    domain_of:
-    - Object
-    range: boolean
-
-
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-
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-
- - - - \ No newline at end of file diff --git a/pr-preview/pr-10/MoleculeAssociation/index.html b/pr-preview/pr-10/MoleculeAssociation/index.html deleted file mode 100644 index dc20e8a..0000000 --- a/pr-preview/pr-10/MoleculeAssociation/index.html +++ /dev/null @@ -1,449 +0,0 @@ - - - - - - - - - - -Class: MoleculeAssociation - gocam - - - - - - - - - - - -
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Class: MoleculeAssociation

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An association between an activity and a molecule term

-

URI: gocam:MoleculeAssociation

-
classDiagram - class MoleculeAssociation - click MoleculeAssociation href "../MoleculeAssociation" - TermAssociation <|-- MoleculeAssociation - click TermAssociation href "../TermAssociation" - - MoleculeAssociation : evidence - - - - - MoleculeAssociation --> "*" EvidenceItem : evidence - click EvidenceItem href "../EvidenceItem" - - - MoleculeAssociation : provenances - - - - - MoleculeAssociation --> "*" ProvenanceInfo : provenances - click ProvenanceInfo href "../ProvenanceInfo" - - - MoleculeAssociation : term - - - - - MoleculeAssociation --> "0..1" MoleculeTermObject : term - click MoleculeTermObject href "../MoleculeTermObject" - - - MoleculeAssociation : type - - -
-

Inheritance

- -

Slots

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
NameCardinality and RangeDescriptionInheritance
term0..1
MoleculeTermObject		The ontology term that describes the nature of the associationTermAssociation
type0..1
String		Association
evidence*
EvidenceItem		Association
provenances*
ProvenanceInfo		Association
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Usages

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used byused intypeused
Activityhas_direct_inputrangeMoleculeAssociation
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Identifier and Mapping Information

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Schema Source

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  • from schema: https://w3id.org/gocam
    • -
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Mappings

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Mapping TypeMapped Value
selfgocam:MoleculeAssociation
nativegocam:MoleculeAssociation
-

LinkML Source

- -

Direct

-
-
name: MoleculeAssociation
-description: An association between an activity and a molecule term
-from_schema: https://w3id.org/gocam
-is_a: TermAssociation
-slot_usage:
-  term:
-    name: term
-    domain_of:
-    - EvidenceItem
-    - EnabledByAssociation
-    - TermAssociation
-    range: MoleculeTermObject
-
-
-
-

Induced

-
-
name: MoleculeAssociation
-description: An association between an activity and a molecule term
-from_schema: https://w3id.org/gocam
-is_a: TermAssociation
-slot_usage:
-  term:
-    name: term
-    domain_of:
-    - EvidenceItem
-    - EnabledByAssociation
-    - TermAssociation
-    range: MoleculeTermObject
-attributes:
-  term:
-    name: term
-    description: The ontology term that describes the nature of the association
-    from_schema: https://w3id.org/gocam
-    alias: term
-    owner: MoleculeAssociation
-    domain_of:
-    - EvidenceItem
-    - EnabledByAssociation
-    - TermAssociation
-    range: MoleculeTermObject
-  type:
-    name: type
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    designates_type: true
-    alias: type
-    owner: MoleculeAssociation
-    domain_of:
-    - Association
-    - Object
-    range: string
-  evidence:
-    name: evidence
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    multivalued: true
-    alias: evidence
-    owner: MoleculeAssociation
-    domain_of:
-    - Association
-    range: EvidenceItem
-    inlined: true
-  provenances:
-    name: provenances
-    from_schema: https://w3id.org/gocam
-    multivalued: true
-    alias: provenances
-    owner: MoleculeAssociation
-    domain_of:
-    - Model
-    - Activity
-    - EvidenceItem
-    - Association
-    range: ProvenanceInfo
-    inlined: true
-    inlined_as_list: true
-
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- -
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- - - - \ No newline at end of file diff --git a/pr-preview/pr-10/MoleculeTermObject/index.html b/pr-preview/pr-10/MoleculeTermObject/index.html deleted file mode 100644 index 101c6d5..0000000 --- a/pr-preview/pr-10/MoleculeTermObject/index.html +++ /dev/null @@ -1,427 +0,0 @@ - - - - - - - - - - -Class: MoleculeTermObject - gocam - - - - - - - - - - - -
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Class: MoleculeTermObject

-

A term object that represents a molecule term from CHEBI or UniProtKB

-

URI: gocam:MoleculeTermObject

-
classDiagram - class MoleculeTermObject - click MoleculeTermObject href "../MoleculeTermObject" - TermObject <|-- MoleculeTermObject - click TermObject href "../TermObject" - - MoleculeTermObject : id - - MoleculeTermObject : label - - MoleculeTermObject : obsolete - - MoleculeTermObject : type - - -
-

Inheritance

- -

Slots

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
NameCardinality and RangeDescriptionInheritance
id1
Uriorcurie		Object
label0..1
String		Object
type0..1
Uriorcurie		Object
obsolete0..1
Boolean		Object
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Usages

- - - - - - - - - - - - - - - - - -
used byused intypeused
MoleculeAssociationtermrangeMoleculeTermObject
-

Identifier and Mapping Information

-

Valid ID Prefixes

-

Instances of this class should have identifiers with one of the following prefixes:

-
    -
  • -

    CHEBI

    -
    • -
  • -

    UniProtKB

    -
    • -
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Schema Source

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  • from schema: https://w3id.org/gocam
    • -
-

Mappings

- - - - - - - - - - - - - - - - - -
Mapping TypeMapped Value
selfgocam:MoleculeTermObject
nativegocam:MoleculeTermObject
-

LinkML Source

- -

Direct

-
-
name: MoleculeTermObject
-id_prefixes:
-- CHEBI
-- UniProtKB
-description: A term object that represents a molecule term from CHEBI or UniProtKB
-from_schema: https://w3id.org/gocam
-is_a: TermObject
-
-
-
-

Induced

-
-
name: MoleculeTermObject
-id_prefixes:
-- CHEBI
-- UniProtKB
-description: A term object that represents a molecule term from CHEBI or UniProtKB
-from_schema: https://w3id.org/gocam
-is_a: TermObject
-attributes:
-  id:
-    name: id
-    from_schema: https://w3id.org/gocam
-    identifier: true
-    alias: id
-    owner: MoleculeTermObject
-    domain_of:
-    - Model
-    - Activity
-    - Object
-    range: uriorcurie
-    required: true
-  label:
-    name: label
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    slot_uri: rdfs:label
-    alias: label
-    owner: MoleculeTermObject
-    domain_of:
-    - Object
-    range: string
-  type:
-    name: type
-    from_schema: https://w3id.org/gocam
-    designates_type: true
-    alias: type
-    owner: MoleculeTermObject
-    domain_of:
-    - Association
-    - Object
-    range: uriorcurie
-  obsolete:
-    name: obsolete
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    alias: obsolete
-    owner: MoleculeTermObject
-    domain_of:
-    - Object
-    range: boolean
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- - - - \ No newline at end of file diff --git a/pr-preview/pr-10/Ncname/index.html b/pr-preview/pr-10/Ncname/index.html deleted file mode 100644 index 872e685..0000000 --- a/pr-preview/pr-10/Ncname/index.html +++ /dev/null @@ -1,364 +0,0 @@ - - - - - - - - - - - - - - - - - - Type: Ncname - gocam - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
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Type: Ncname

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Prefix part of CURIE

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URI: xsd:string

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    base: NCName

    -
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    uri: xsd:string

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    repr: str

    -
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Identifier and Mapping Information

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Schema Source

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- - - - - - - - - - \ No newline at end of file diff --git a/pr-preview/pr-10/Nodeidentifier/index.html b/pr-preview/pr-10/Nodeidentifier/index.html deleted file mode 100644 index 7c7ebf1..0000000 --- a/pr-preview/pr-10/Nodeidentifier/index.html +++ /dev/null @@ -1,364 +0,0 @@ - - - - - - - - - - - - - - - - - - Type: Nodeidentifier - gocam - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
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Type: Nodeidentifier

-

A URI, CURIE or BNODE that represents a node in a model.

-

URI: shex:nonLiteral

-
    -
  • -

    base: NodeIdentifier

    -
    • -
  • -

    uri: shex:nonLiteral

    -
    • -
  • -

    repr: str

    -
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-

Identifier and Mapping Information

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Schema Source

-
    -
  • from schema: https://w3id.org/gocam
    • -
- - - - - - -
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- - - - - - - - - - \ No newline at end of file diff --git a/pr-preview/pr-10/Object/index.html b/pr-preview/pr-10/Object/index.html deleted file mode 100644 index 9f87856..0000000 --- a/pr-preview/pr-10/Object/index.html +++ /dev/null @@ -1,443 +0,0 @@ - - - - - - - - - - -Class: Object - gocam - - - - - - - - - - - -
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Class: Object

-

An abstract class for all identified objects in a model

-

URI: gocam:Object

-
classDiagram - class Object - click Object href "../Object" - Object <|-- TermObject - click TermObject href "../TermObject" - Object <|-- PublicationObject - click PublicationObject href "../PublicationObject" - - Object : id - - Object : label - - Object : obsolete - - Object : type - - -
-

Inheritance

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Slots

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
NameCardinality and RangeDescriptionInheritance
id1
Uriorcurie		direct
label0..1
String		direct
type0..1
Uriorcurie		direct
obsolete0..1
Boolean		direct
-

Usages

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used byused intypeused
ModelobjectsrangeObject
EvidenceItemwith_objectsrangeObject
-

Identifier and Mapping Information

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Schema Source

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  • from schema: https://w3id.org/gocam
    • -
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Mappings

- - - - - - - - - - - - - - - - - -
Mapping TypeMapped Value
selfgocam:Object
nativegocam:Object
-

LinkML Source

- -

Direct

-
-
name: Object
-description: An abstract class for all identified objects in a model
-from_schema: https://w3id.org/gocam
-attributes:
-  id:
-    name: id
-    from_schema: https://w3id.org/gocam
-    identifier: true
-    domain_of:
-    - Model
-    - Activity
-    - Object
-    range: uriorcurie
-    required: true
-  label:
-    name: label
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    slot_uri: rdfs:label
-    domain_of:
-    - Object
-  type:
-    name: type
-    from_schema: https://w3id.org/gocam
-    designates_type: true
-    domain_of:
-    - Association
-    - Object
-    range: uriorcurie
-  obsolete:
-    name: obsolete
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    domain_of:
-    - Object
-    range: boolean
-
-
-
-

Induced

-
-
name: Object
-description: An abstract class for all identified objects in a model
-from_schema: https://w3id.org/gocam
-attributes:
-  id:
-    name: id
-    from_schema: https://w3id.org/gocam
-    identifier: true
-    alias: id
-    owner: Object
-    domain_of:
-    - Model
-    - Activity
-    - Object
-    range: uriorcurie
-    required: true
-  label:
-    name: label
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    slot_uri: rdfs:label
-    alias: label
-    owner: Object
-    domain_of:
-    - Object
-    range: string
-  type:
-    name: type
-    from_schema: https://w3id.org/gocam
-    designates_type: true
-    alias: type
-    owner: Object
-    domain_of:
-    - Association
-    - Object
-    range: uriorcurie
-  obsolete:
-    name: obsolete
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    alias: obsolete
-    owner: Object
-    domain_of:
-    - Object
-    range: boolean
-
-
-
-
-
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-
- -
-
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- - - - \ No newline at end of file diff --git a/pr-preview/pr-10/Objectidentifier/index.html b/pr-preview/pr-10/Objectidentifier/index.html deleted file mode 100644 index beac85a..0000000 --- a/pr-preview/pr-10/Objectidentifier/index.html +++ /dev/null @@ -1,375 +0,0 @@ - - - - - - - - - - - - - - - - - - Type: Objectidentifier - gocam - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
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Type: Objectidentifier

-

A URI or CURIE that represents an object in the model.

-

URI: shex:iri

-
    -
  • -

    base: ElementIdentifier

    -
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    uri: shex:iri

    -
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    repr: str

    -
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Comments

-
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  • Used for inheritance and type checking
    • -
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Identifier and Mapping Information

-

Schema Source

-
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  • from schema: https://w3id.org/gocam
    • -
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- - - - - - - - - - \ No newline at end of file diff --git a/pr-preview/pr-10/PhaseTermObject/index.html b/pr-preview/pr-10/PhaseTermObject/index.html deleted file mode 100644 index 5e52a56..0000000 --- a/pr-preview/pr-10/PhaseTermObject/index.html +++ /dev/null @@ -1,408 +0,0 @@ - - - - - - - - - - -Class: PhaseTermObject - gocam - - - - - - - - - - - -
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Class: PhaseTermObject

-

A term object that represents a phase term from GO or UBERON

-

URI: gocam:PhaseTermObject

-
classDiagram - class PhaseTermObject - click PhaseTermObject href "../PhaseTermObject" - TermObject <|-- PhaseTermObject - click TermObject href "../TermObject" - - PhaseTermObject : id - - PhaseTermObject : label - - PhaseTermObject : obsolete - - PhaseTermObject : type - - -
-

Inheritance

- -

Slots

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
NameCardinality and RangeDescriptionInheritance
id1
Uriorcurie		Object
label0..1
String		Object
type0..1
Uriorcurie		Object
obsolete0..1
Boolean		Object
-

Identifier and Mapping Information

-

Valid ID Prefixes

-

Instances of this class should have identifiers with one of the following prefixes:

-
    -
  • -

    GO

    -
    • -
  • -

    UBERON

    -
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    PO

    -
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Schema Source

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    • -
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Mappings

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Mapping TypeMapped Value
selfgocam:PhaseTermObject
nativegocam:PhaseTermObject
-

LinkML Source

- -

Direct

-
-
name: PhaseTermObject
-id_prefixes:
-- GO
-- UBERON
-- PO
-description: A term object that represents a phase term from GO or UBERON
-from_schema: https://w3id.org/gocam
-is_a: TermObject
-
-
-
-

Induced

-
-
name: PhaseTermObject
-id_prefixes:
-- GO
-- UBERON
-- PO
-description: A term object that represents a phase term from GO or UBERON
-from_schema: https://w3id.org/gocam
-is_a: TermObject
-attributes:
-  id:
-    name: id
-    from_schema: https://w3id.org/gocam
-    identifier: true
-    alias: id
-    owner: PhaseTermObject
-    domain_of:
-    - Model
-    - Activity
-    - Object
-    range: uriorcurie
-    required: true
-  label:
-    name: label
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    slot_uri: rdfs:label
-    alias: label
-    owner: PhaseTermObject
-    domain_of:
-    - Object
-    range: string
-  type:
-    name: type
-    from_schema: https://w3id.org/gocam
-    designates_type: true
-    alias: type
-    owner: PhaseTermObject
-    domain_of:
-    - Association
-    - Object
-    range: uriorcurie
-  obsolete:
-    name: obsolete
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    alias: obsolete
-    owner: PhaseTermObject
-    domain_of:
-    - Object
-    range: boolean
-
-
-
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- -
-
- -
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- - - - \ No newline at end of file diff --git a/pr-preview/pr-10/PredicateTermObject/index.html b/pr-preview/pr-10/PredicateTermObject/index.html deleted file mode 100644 index 86daaa3..0000000 --- a/pr-preview/pr-10/PredicateTermObject/index.html +++ /dev/null @@ -1,420 +0,0 @@ - - - - - - - - - - -Class: PredicateTermObject - gocam - - - - - - - - - - - -
- - Skip to content - -
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Class: PredicateTermObject

-

A term object that represents a taxon term from NCBITaxon

-

URI: gocam:PredicateTermObject

-
classDiagram - class PredicateTermObject - click PredicateTermObject href "../PredicateTermObject" - TermObject <|-- PredicateTermObject - click TermObject href "../TermObject" - - PredicateTermObject : id - - PredicateTermObject : label - - PredicateTermObject : obsolete - - PredicateTermObject : type - - -
-

Inheritance

- -

Slots

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
NameCardinality and RangeDescriptionInheritance
id1
Uriorcurie		Object
label0..1
String		Object
type0..1
Uriorcurie		Object
obsolete0..1
Boolean		Object
-

Usages

- - - - - - - - - - - - - - - - - -
used byused intypeused
CausalAssociationpredicaterangePredicateTermObject
-

Identifier and Mapping Information

-

Valid ID Prefixes

-

Instances of this class should have identifiers with one of the following prefixes:

-
    -
  • RO
    • -
-

Schema Source

-
    -
  • from schema: https://w3id.org/gocam
    • -
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Mappings

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Mapping TypeMapped Value
selfgocam:PredicateTermObject
nativegocam:PredicateTermObject
-

LinkML Source

- -

Direct

-
-
name: PredicateTermObject
-id_prefixes:
-- RO
-description: A term object that represents a taxon term from NCBITaxon
-from_schema: https://w3id.org/gocam
-is_a: TermObject
-
-
-
-

Induced

-
-
name: PredicateTermObject
-id_prefixes:
-- RO
-description: A term object that represents a taxon term from NCBITaxon
-from_schema: https://w3id.org/gocam
-is_a: TermObject
-attributes:
-  id:
-    name: id
-    from_schema: https://w3id.org/gocam
-    identifier: true
-    alias: id
-    owner: PredicateTermObject
-    domain_of:
-    - Model
-    - Activity
-    - Object
-    range: uriorcurie
-    required: true
-  label:
-    name: label
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    slot_uri: rdfs:label
-    alias: label
-    owner: PredicateTermObject
-    domain_of:
-    - Object
-    range: string
-  type:
-    name: type
-    from_schema: https://w3id.org/gocam
-    designates_type: true
-    alias: type
-    owner: PredicateTermObject
-    domain_of:
-    - Association
-    - Object
-    range: uriorcurie
-  obsolete:
-    name: obsolete
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    alias: obsolete
-    owner: PredicateTermObject
-    domain_of:
-    - Object
-    range: boolean
-
-
-
-
-
- -
-
- -
-
-
-
- - - - \ No newline at end of file diff --git a/pr-preview/pr-10/ProteinComplexTermObject/index.html b/pr-preview/pr-10/ProteinComplexTermObject/index.html deleted file mode 100644 index e5a68de..0000000 --- a/pr-preview/pr-10/ProteinComplexTermObject/index.html +++ /dev/null @@ -1,409 +0,0 @@ - - - - - - - - - - -Class: ProteinComplexTermObject - gocam - - - - - - - - - - - -
- - Skip to content - -
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- - - -

Class: ProteinComplexTermObject

-

A term object that represents a protein complex term from GO

-

URI: gocam:ProteinComplexTermObject

-
classDiagram - class ProteinComplexTermObject - click ProteinComplexTermObject href "../ProteinComplexTermObject" - InformationBiomacromoleculeTermObject <|-- ProteinComplexTermObject - click InformationBiomacromoleculeTermObject href "../InformationBiomacromoleculeTermObject" - - ProteinComplexTermObject : id - - ProteinComplexTermObject : label - - ProteinComplexTermObject : obsolete - - ProteinComplexTermObject : type - - -
-

Inheritance

- -

Slots

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
NameCardinality and RangeDescriptionInheritance
id1
Uriorcurie		Object
label0..1
String		Object
type0..1
Uriorcurie		Object
obsolete0..1
Boolean		Object
-

Usages

- - - - - - - - - - - - - - - - - -
used byused intypeused
EnabledByProteinComplexAssociationtermrangeProteinComplexTermObject
-

Identifier and Mapping Information

-

Schema Source

-
    -
  • from schema: https://w3id.org/gocam
    • -
-

Mappings

- - - - - - - - - - - - - - - - - -
Mapping TypeMapped Value
selfgocam:ProteinComplexTermObject
nativegocam:ProteinComplexTermObject
-

LinkML Source

- -

Direct

-
-
name: ProteinComplexTermObject
-description: A term object that represents a protein complex term from GO
-from_schema: https://w3id.org/gocam
-is_a: InformationBiomacromoleculeTermObject
-
-
-
-

Induced

-
-
name: ProteinComplexTermObject
-description: A term object that represents a protein complex term from GO
-from_schema: https://w3id.org/gocam
-is_a: InformationBiomacromoleculeTermObject
-attributes:
-  id:
-    name: id
-    from_schema: https://w3id.org/gocam
-    identifier: true
-    alias: id
-    owner: ProteinComplexTermObject
-    domain_of:
-    - Model
-    - Activity
-    - Object
-    range: uriorcurie
-    required: true
-  label:
-    name: label
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    slot_uri: rdfs:label
-    alias: label
-    owner: ProteinComplexTermObject
-    domain_of:
-    - Object
-    range: string
-  type:
-    name: type
-    from_schema: https://w3id.org/gocam
-    designates_type: true
-    alias: type
-    owner: ProteinComplexTermObject
-    domain_of:
-    - Association
-    - Object
-    range: uriorcurie
-  obsolete:
-    name: obsolete
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    alias: obsolete
-    owner: ProteinComplexTermObject
-    domain_of:
-    - Object
-    range: boolean
-
-
-
-
-
- -
-
- -
-
-
-
- - - - \ No newline at end of file diff --git a/pr-preview/pr-10/ProvenanceInfo/index.html b/pr-preview/pr-10/ProvenanceInfo/index.html deleted file mode 100644 index fce2ac7..0000000 --- a/pr-preview/pr-10/ProvenanceInfo/index.html +++ /dev/null @@ -1,499 +0,0 @@ - - - - - - - - - - -Class: ProvenanceInfo - gocam - - - - - - - - - - - -
- - Skip to content - -
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Class: ProvenanceInfo

-

Provenance information for an object

-

URI: gocam:ProvenanceInfo

-
classDiagram - class ProvenanceInfo - click ProvenanceInfo href "../ProvenanceInfo" - ProvenanceInfo : contributor - - ProvenanceInfo : created - - ProvenanceInfo : date - - ProvenanceInfo : provided_by - - -
- -

Slots

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
NameCardinality and RangeDescriptionInheritance
contributor0..1
String		direct
created0..1
String		direct
date0..1
String		direct
provided_by0..1
String		direct
-

Usages

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
used byused intypeused
ModelprovenancesrangeProvenanceInfo
ActivityprovenancesrangeProvenanceInfo
EvidenceItemprovenancesrangeProvenanceInfo
AssociationprovenancesrangeProvenanceInfo
EnabledByAssociationprovenancesrangeProvenanceInfo
EnabledByGeneProductAssociationprovenancesrangeProvenanceInfo
EnabledByProteinComplexAssociationprovenancesrangeProvenanceInfo
CausalAssociationprovenancesrangeProvenanceInfo
TermAssociationprovenancesrangeProvenanceInfo
MolecularFunctionAssociationprovenancesrangeProvenanceInfo
BiologicalProcessAssociationprovenancesrangeProvenanceInfo
CellularAnatomicalEntityAssociationprovenancesrangeProvenanceInfo
CellTypeAssociationprovenancesrangeProvenanceInfo
GrossAnatomyAssociationprovenancesrangeProvenanceInfo
MoleculeAssociationprovenancesrangeProvenanceInfo
-

Identifier and Mapping Information

-

Schema Source

-
    -
  • from schema: https://w3id.org/gocam
    • -
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Mappings

- - - - - - - - - - - - - - - - - -
Mapping TypeMapped Value
selfgocam:ProvenanceInfo
nativegocam:ProvenanceInfo
-

LinkML Source

- -

Direct

-
-
name: ProvenanceInfo
-description: Provenance information for an object
-from_schema: https://w3id.org/gocam
-attributes:
-  contributor:
-    name: contributor
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    slot_uri: dct:contributor
-    domain_of:
-    - ProvenanceInfo
-  created:
-    name: created
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    slot_uri: dct:created
-    domain_of:
-    - ProvenanceInfo
-  date:
-    name: date
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    slot_uri: dct:date
-    domain_of:
-    - ProvenanceInfo
-  provided_by:
-    name: provided_by
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    slot_uri: pav:providedBy
-    domain_of:
-    - ProvenanceInfo
-
-
-
-

Induced

-
-
name: ProvenanceInfo
-description: Provenance information for an object
-from_schema: https://w3id.org/gocam
-attributes:
-  contributor:
-    name: contributor
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    slot_uri: dct:contributor
-    alias: contributor
-    owner: ProvenanceInfo
-    domain_of:
-    - ProvenanceInfo
-    range: string
-  created:
-    name: created
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    slot_uri: dct:created
-    alias: created
-    owner: ProvenanceInfo
-    domain_of:
-    - ProvenanceInfo
-    range: string
-  date:
-    name: date
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    slot_uri: dct:date
-    alias: date
-    owner: ProvenanceInfo
-    domain_of:
-    - ProvenanceInfo
-    range: string
-  provided_by:
-    name: provided_by
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    slot_uri: pav:providedBy
-    alias: provided_by
-    owner: ProvenanceInfo
-    domain_of:
-    - ProvenanceInfo
-    range: string
-
-
-
-
-
- -
-
- -
-
-
-
- - - - \ No newline at end of file diff --git a/pr-preview/pr-10/PublicationObject/index.html b/pr-preview/pr-10/PublicationObject/index.html deleted file mode 100644 index a64f63d..0000000 --- a/pr-preview/pr-10/PublicationObject/index.html +++ /dev/null @@ -1,476 +0,0 @@ - - - - - - - - - - -Class: PublicationObject - gocam - - - - - - - - - - - -
- - Skip to content - -
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- - - -

Class: PublicationObject

-

An object that represents a publication or other kind of reference

-

URI: gocam:PublicationObject

-
classDiagram - class PublicationObject - click PublicationObject href "../PublicationObject" - Object <|-- PublicationObject - click Object href "../Object" - - PublicationObject : abstract_text - - PublicationObject : full_text - - PublicationObject : id - - PublicationObject : label - - PublicationObject : obsolete - - PublicationObject : type - - -
-

Inheritance

-
    -
  • Object
      -
    • PublicationObject
      • -
    -
    • -
-

Slots

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
NameCardinality and RangeDescriptionInheritance
abstract_text0..1
String		direct
full_text0..1
String		direct
id1
Uriorcurie		Object
label0..1
String		Object
type0..1
Uriorcurie		Object
obsolete0..1
Boolean		Object
-

Usages

- - - - - - - - - - - - - - - - - -
used byused intypeused
EvidenceItemreferencerangePublicationObject
-

Identifier and Mapping Information

-

Valid ID Prefixes

-

Instances of this class should have identifiers with one of the following prefixes:

-
    -
  • -

    PMID

    -
    • -
  • -

    GOREF

    -
    • -
  • -

    DOI

    -
    • -
-

Schema Source

-
    -
  • from schema: https://w3id.org/gocam
    • -
-

Mappings

- - - - - - - - - - - - - - - - - -
Mapping TypeMapped Value
selfgocam:PublicationObject
nativegocam:PublicationObject
-

LinkML Source

- -

Direct

-
-
name: PublicationObject
-id_prefixes:
-- PMID
-- GOREF
-- DOI
-description: An object that represents a publication or other kind of reference
-from_schema: https://w3id.org/gocam
-is_a: Object
-attributes:
-  abstract_text:
-    name: abstract_text
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    domain_of:
-    - PublicationObject
-  full_text:
-    name: full_text
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    domain_of:
-    - PublicationObject
-
-
-
-

Induced

-
-
name: PublicationObject
-id_prefixes:
-- PMID
-- GOREF
-- DOI
-description: An object that represents a publication or other kind of reference
-from_schema: https://w3id.org/gocam
-is_a: Object
-attributes:
-  abstract_text:
-    name: abstract_text
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    alias: abstract_text
-    owner: PublicationObject
-    domain_of:
-    - PublicationObject
-    range: string
-  full_text:
-    name: full_text
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    alias: full_text
-    owner: PublicationObject
-    domain_of:
-    - PublicationObject
-    range: string
-  id:
-    name: id
-    from_schema: https://w3id.org/gocam
-    identifier: true
-    alias: id
-    owner: PublicationObject
-    domain_of:
-    - Model
-    - Activity
-    - Object
-    range: uriorcurie
-    required: true
-  label:
-    name: label
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    slot_uri: rdfs:label
-    alias: label
-    owner: PublicationObject
-    domain_of:
-    - Object
-    range: string
-  type:
-    name: type
-    from_schema: https://w3id.org/gocam
-    designates_type: true
-    alias: type
-    owner: PublicationObject
-    domain_of:
-    - Association
-    - Object
-    range: uriorcurie
-  obsolete:
-    name: obsolete
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    alias: obsolete
-    owner: PublicationObject
-    domain_of:
-    - Object
-    range: boolean
-
-
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-
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- -
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- -
-
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- - - - \ No newline at end of file diff --git a/pr-preview/pr-10/Sparqlpath/index.html b/pr-preview/pr-10/Sparqlpath/index.html deleted file mode 100644 index 46bac49..0000000 --- a/pr-preview/pr-10/Sparqlpath/index.html +++ /dev/null @@ -1,364 +0,0 @@ - - - - - - - - - - - - - - - - - - Type: Sparqlpath - gocam - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
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Type: Sparqlpath

-

A string encoding a SPARQL Property Path. The value of the string MUST conform to SPARQL syntax and SHOULD dereference to zero or more valid objects within the current instance document when encoded as RDF.

-

URI: xsd:string

- -

Identifier and Mapping Information

-

Schema Source

-
    -
  • from schema: https://w3id.org/gocam
    • -
- - - - - - -
-
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- -
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- - - - - - - - - - \ No newline at end of file diff --git a/pr-preview/pr-10/String/index.html b/pr-preview/pr-10/String/index.html deleted file mode 100644 index 797c47e..0000000 --- a/pr-preview/pr-10/String/index.html +++ /dev/null @@ -1,361 +0,0 @@ - - - - - - - - - - - - - - - - - - Type: String - gocam - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
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Type: String

-

A character string

-

URI: xsd:string

-
    -
  • -

    base: str

    -
    • -
  • -

    uri: xsd:string

    -
    • -
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Identifier and Mapping Information

-

Schema Source

-
    -
  • from schema: https://w3id.org/gocam
    • -
- - - - - - -
-
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- -
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- - - - - - - - - - \ No newline at end of file diff --git a/pr-preview/pr-10/TaxonTermObject/index.html b/pr-preview/pr-10/TaxonTermObject/index.html deleted file mode 100644 index 737a821..0000000 --- a/pr-preview/pr-10/TaxonTermObject/index.html +++ /dev/null @@ -1,420 +0,0 @@ - - - - - - - - - - -Class: TaxonTermObject - gocam - - - - - - - - - - - -
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Class: TaxonTermObject

-

A term object that represents a taxon term from NCBITaxon

-

URI: gocam:TaxonTermObject

-
classDiagram - class TaxonTermObject - click TaxonTermObject href "../TaxonTermObject" - TermObject <|-- TaxonTermObject - click TermObject href "../TermObject" - - TaxonTermObject : id - - TaxonTermObject : label - - TaxonTermObject : obsolete - - TaxonTermObject : type - - -
-

Inheritance

- -

Slots

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
NameCardinality and RangeDescriptionInheritance
id1
Uriorcurie		Object
label0..1
String		Object
type0..1
Uriorcurie		Object
obsolete0..1
Boolean		Object
-

Usages

- - - - - - - - - - - - - - - - - -
used byused intypeused
ModeltaxonrangeTaxonTermObject
-

Identifier and Mapping Information

-

Valid ID Prefixes

-

Instances of this class should have identifiers with one of the following prefixes:

-
    -
  • NCBITaxon
    • -
-

Schema Source

-
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  • from schema: https://w3id.org/gocam
    • -
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Mappings

- - - - - - - - - - - - - - - - - -
Mapping TypeMapped Value
selfgocam:TaxonTermObject
nativegocam:TaxonTermObject
-

LinkML Source

- -

Direct

-
-
name: TaxonTermObject
-id_prefixes:
-- NCBITaxon
-description: A term object that represents a taxon term from NCBITaxon
-from_schema: https://w3id.org/gocam
-is_a: TermObject
-
-
-
-

Induced

-
-
name: TaxonTermObject
-id_prefixes:
-- NCBITaxon
-description: A term object that represents a taxon term from NCBITaxon
-from_schema: https://w3id.org/gocam
-is_a: TermObject
-attributes:
-  id:
-    name: id
-    from_schema: https://w3id.org/gocam
-    identifier: true
-    alias: id
-    owner: TaxonTermObject
-    domain_of:
-    - Model
-    - Activity
-    - Object
-    range: uriorcurie
-    required: true
-  label:
-    name: label
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    slot_uri: rdfs:label
-    alias: label
-    owner: TaxonTermObject
-    domain_of:
-    - Object
-    range: string
-  type:
-    name: type
-    from_schema: https://w3id.org/gocam
-    designates_type: true
-    alias: type
-    owner: TaxonTermObject
-    domain_of:
-    - Association
-    - Object
-    range: uriorcurie
-  obsolete:
-    name: obsolete
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    alias: obsolete
-    owner: TaxonTermObject
-    domain_of:
-    - Object
-    range: boolean
-
-
-
-
-
- -
-
- -
-
-
-
- - - - \ No newline at end of file diff --git a/pr-preview/pr-10/TermAssociation/index.html b/pr-preview/pr-10/TermAssociation/index.html deleted file mode 100644 index 100dc7a..0000000 --- a/pr-preview/pr-10/TermAssociation/index.html +++ /dev/null @@ -1,444 +0,0 @@ - - - - - - - - - - -Class: TermAssociation - gocam - - - - - - - - - - - -
- - Skip to content - -
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- - - -

Class: TermAssociation

-

An association between an activity and a term, potentially with extensions

-
    -
  • NOTE: this is an abstract class and should not be instantiated directly
    • -
-

URI: gocam:TermAssociation

-
classDiagram - class TermAssociation - click TermAssociation href "../TermAssociation" - Association <|-- TermAssociation - click Association href "../Association" - - - TermAssociation <|-- MolecularFunctionAssociation - click MolecularFunctionAssociation href "../MolecularFunctionAssociation" - TermAssociation <|-- BiologicalProcessAssociation - click BiologicalProcessAssociation href "../BiologicalProcessAssociation" - TermAssociation <|-- CellularAnatomicalEntityAssociation - click CellularAnatomicalEntityAssociation href "../CellularAnatomicalEntityAssociation" - TermAssociation <|-- CellTypeAssociation - click CellTypeAssociation href "../CellTypeAssociation" - TermAssociation <|-- GrossAnatomyAssociation - click GrossAnatomyAssociation href "../GrossAnatomyAssociation" - TermAssociation <|-- MoleculeAssociation - click MoleculeAssociation href "../MoleculeAssociation" - - - TermAssociation : evidence - - - - - TermAssociation --> "*" EvidenceItem : evidence - click EvidenceItem href "../EvidenceItem" - - - TermAssociation : provenances - - - - - TermAssociation --> "*" ProvenanceInfo : provenances - click ProvenanceInfo href "../ProvenanceInfo" - - - TermAssociation : term - - - - - TermAssociation --> "0..1" TermObject : term - click TermObject href "../TermObject" - - - TermAssociation : type - - -
-

Inheritance

- -

Slots

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
NameCardinality and RangeDescriptionInheritance
term0..1
TermObject		The ontology term that describes the nature of the associationdirect
type0..1
String		Association
evidence*
EvidenceItem		Association
provenances*
ProvenanceInfo		Association
-

Identifier and Mapping Information

-

Schema Source

-
    -
  • from schema: https://w3id.org/gocam
    • -
-

Mappings

- - - - - - - - - - - - - - - - - -
Mapping TypeMapped Value
selfgocam:TermAssociation
nativegocam:TermAssociation
-

LinkML Source

- -

Direct

-
-
name: TermAssociation
-description: An association between an activity and a term, potentially with extensions
-from_schema: https://w3id.org/gocam
-is_a: Association
-abstract: true
-attributes:
-  term:
-    name: term
-    description: The ontology term that describes the nature of the association
-    from_schema: https://w3id.org/gocam
-    domain_of:
-    - EvidenceItem
-    - EnabledByAssociation
-    - TermAssociation
-    range: TermObject
-
-
-
-

Induced

-
-
name: TermAssociation
-description: An association between an activity and a term, potentially with extensions
-from_schema: https://w3id.org/gocam
-is_a: Association
-abstract: true
-attributes:
-  term:
-    name: term
-    description: The ontology term that describes the nature of the association
-    from_schema: https://w3id.org/gocam
-    alias: term
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Class: TermObject

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An abstract class for all ontology term objects

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URI: gocam:TermObject

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classDiagram - class TermObject - click TermObject href "../TermObject" - Object <|-- TermObject - click Object href "../Object" - - - TermObject <|-- EvidenceTermObject - click EvidenceTermObject href "../EvidenceTermObject" - TermObject <|-- MolecularFunctionTermObject - click MolecularFunctionTermObject href "../MolecularFunctionTermObject" - TermObject <|-- BiologicalProcessTermObject - click BiologicalProcessTermObject href "../BiologicalProcessTermObject" - TermObject <|-- CellularAnatomicalEntityTermObject - click CellularAnatomicalEntityTermObject href "../CellularAnatomicalEntityTermObject" - TermObject <|-- MoleculeTermObject - click MoleculeTermObject href "../MoleculeTermObject" - TermObject <|-- CellTypeTermObject - click CellTypeTermObject href "../CellTypeTermObject" - TermObject <|-- GrossAnatomicalStructureTermObject - click GrossAnatomicalStructureTermObject href "../GrossAnatomicalStructureTermObject" - TermObject <|-- PhaseTermObject - click PhaseTermObject href "../PhaseTermObject" - TermObject <|-- InformationBiomacromoleculeTermObject - click InformationBiomacromoleculeTermObject href "../InformationBiomacromoleculeTermObject" - TermObject <|-- TaxonTermObject - click TaxonTermObject href "../TaxonTermObject" - TermObject <|-- PredicateTermObject - click PredicateTermObject href "../PredicateTermObject" - - - TermObject : id - - TermObject : label - - TermObject : obsolete - - TermObject : type - - -
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id1
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label0..1
String		Object
type0..1
Uriorcurie		Object
obsolete0..1
Boolean		Object
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selfgocam:TermObject
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-    owner: TermObject
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-    range: uriorcurie
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A time object represents a (local) time of day, independent of any particular day

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a complete URI

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a URI or a CURIE

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GO CAM Data Model (Python)

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NameDescriptionModifies Slot
PublicationObjectAn object that represents a publication or other kind of referenceno
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name: abstract_text
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URI: gocam:activities

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NameDescriptionModifies Slot
ModelA model of a biological program consisting of a set of causally connected act...no
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LinkML Source

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name: activities
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"src/assets/javascripts/polyfills/index.ts"], - "sourceRoot": "../../../..", - "sourcesContent": ["(function (global, factory) {\n typeof exports === 'object' && typeof module !== 'undefined' ? factory() :\n typeof define === 'function' && define.amd ? define(factory) :\n (factory());\n}(this, (function () { 'use strict';\n\n /**\n * Applies the :focus-visible polyfill at the given scope.\n * A scope in this case is either the top-level Document or a Shadow Root.\n *\n * @param {(Document|ShadowRoot)} scope\n * @see https://github.com/WICG/focus-visible\n */\n function applyFocusVisiblePolyfill(scope) {\n var hadKeyboardEvent = true;\n var hadFocusVisibleRecently = false;\n var hadFocusVisibleRecentlyTimeout = null;\n\n var inputTypesAllowlist = {\n text: true,\n search: true,\n url: true,\n tel: true,\n email: true,\n password: true,\n number: true,\n date: true,\n month: true,\n week: true,\n time: true,\n datetime: true,\n 'datetime-local': true\n };\n\n /**\n * Helper function for legacy browsers and iframes which sometimes focus\n * elements like document, body, and non-interactive SVG.\n * @param {Element} el\n */\n function isValidFocusTarget(el) {\n if (\n el &&\n el !== document &&\n el.nodeName !== 'HTML' &&\n el.nodeName !== 'BODY' &&\n 'classList' in el &&\n 'contains' in el.classList\n ) {\n return true;\n }\n return false;\n }\n\n /**\n * Computes whether the given element should automatically trigger the\n * `focus-visible` class being added, i.e. whether it should always match\n * `:focus-visible` when focused.\n * @param {Element} el\n * @return {boolean}\n */\n function focusTriggersKeyboardModality(el) {\n var type = el.type;\n var tagName = el.tagName;\n\n if (tagName === 'INPUT' && inputTypesAllowlist[type] && !el.readOnly) {\n return true;\n }\n\n if (tagName === 'TEXTAREA' && !el.readOnly) {\n return true;\n }\n\n if (el.isContentEditable) {\n return true;\n }\n\n return false;\n }\n\n /**\n * Add the `focus-visible` class to the given element if it was not added by\n * the author.\n * @param {Element} el\n */\n function addFocusVisibleClass(el) {\n if (el.classList.contains('focus-visible')) {\n return;\n }\n el.classList.add('focus-visible');\n el.setAttribute('data-focus-visible-added', '');\n }\n\n /**\n * Remove the `focus-visible` class from the given element if it was not\n * originally added by the author.\n * @param {Element} el\n */\n function removeFocusVisibleClass(el) {\n if (!el.hasAttribute('data-focus-visible-added')) {\n return;\n }\n el.classList.remove('focus-visible');\n el.removeAttribute('data-focus-visible-added');\n }\n\n /**\n * If the most recent user interaction was via the keyboard;\n * and the key press did not include a meta, alt/option, or control key;\n * then the modality is keyboard. Otherwise, the modality is not keyboard.\n * Apply `focus-visible` to any current active element and keep track\n * of our keyboard modality state with `hadKeyboardEvent`.\n * @param {KeyboardEvent} e\n */\n function onKeyDown(e) {\n if (e.metaKey || e.altKey || e.ctrlKey) {\n return;\n }\n\n if (isValidFocusTarget(scope.activeElement)) {\n addFocusVisibleClass(scope.activeElement);\n }\n\n hadKeyboardEvent = true;\n }\n\n /**\n * If at any point a user clicks with a pointing device, ensure that we change\n * the modality away from keyboard.\n * This avoids the situation where a user presses a key on an already focused\n * element, and then clicks on a different element, focusing it with a\n * pointing device, while we still think we're in keyboard modality.\n * @param {Event} e\n */\n function onPointerDown(e) {\n hadKeyboardEvent = false;\n }\n\n /**\n * On `focus`, add the `focus-visible` class to the target if:\n * - the target received focus as a result of keyboard navigation, or\n * - the event target is an element that will likely require interaction\n * via the keyboard (e.g. a text box)\n * @param {Event} e\n */\n function onFocus(e) {\n // Prevent IE from focusing the document or HTML element.\n if (!isValidFocusTarget(e.target)) {\n return;\n }\n\n if (hadKeyboardEvent || focusTriggersKeyboardModality(e.target)) {\n addFocusVisibleClass(e.target);\n }\n }\n\n /**\n * On `blur`, remove the `focus-visible` class from the target.\n * @param {Event} e\n */\n function onBlur(e) {\n if (!isValidFocusTarget(e.target)) {\n return;\n }\n\n if (\n e.target.classList.contains('focus-visible') ||\n e.target.hasAttribute('data-focus-visible-added')\n ) {\n // To detect a tab/window switch, we look for a blur event followed\n // rapidly by a visibility change.\n // If we don't see a visibility change within 100ms, it's probably a\n // regular focus change.\n hadFocusVisibleRecently = true;\n window.clearTimeout(hadFocusVisibleRecentlyTimeout);\n hadFocusVisibleRecentlyTimeout = window.setTimeout(function() {\n hadFocusVisibleRecently = false;\n }, 100);\n removeFocusVisibleClass(e.target);\n }\n }\n\n /**\n * If the user changes tabs, keep track of whether or not the previously\n * focused element had .focus-visible.\n * @param {Event} e\n */\n function onVisibilityChange(e) {\n if (document.visibilityState === 'hidden') {\n // If the tab becomes active again, the browser will handle calling focus\n // on the element (Safari actually calls it twice).\n // If this tab change caused a blur on an element with focus-visible,\n // re-apply the class when the user switches back to the tab.\n if (hadFocusVisibleRecently) {\n hadKeyboardEvent = true;\n }\n addInitialPointerMoveListeners();\n }\n }\n\n /**\n * Add a group of listeners to detect usage of any pointing devices.\n * These listeners will be added when the polyfill first loads, and anytime\n * the window is blurred, so that they are active when the window regains\n * focus.\n */\n function addInitialPointerMoveListeners() {\n document.addEventListener('mousemove', onInitialPointerMove);\n document.addEventListener('mousedown', onInitialPointerMove);\n document.addEventListener('mouseup', onInitialPointerMove);\n document.addEventListener('pointermove', onInitialPointerMove);\n document.addEventListener('pointerdown', onInitialPointerMove);\n document.addEventListener('pointerup', onInitialPointerMove);\n document.addEventListener('touchmove', onInitialPointerMove);\n document.addEventListener('touchstart', onInitialPointerMove);\n document.addEventListener('touchend', onInitialPointerMove);\n }\n\n function removeInitialPointerMoveListeners() {\n document.removeEventListener('mousemove', onInitialPointerMove);\n document.removeEventListener('mousedown', onInitialPointerMove);\n document.removeEventListener('mouseup', onInitialPointerMove);\n document.removeEventListener('pointermove', onInitialPointerMove);\n document.removeEventListener('pointerdown', onInitialPointerMove);\n document.removeEventListener('pointerup', onInitialPointerMove);\n document.removeEventListener('touchmove', onInitialPointerMove);\n document.removeEventListener('touchstart', onInitialPointerMove);\n document.removeEventListener('touchend', onInitialPointerMove);\n }\n\n /**\n * When the polfyill first loads, assume the user is in keyboard modality.\n * If any event is received from a pointing device (e.g. mouse, pointer,\n * touch), turn off keyboard modality.\n * This accounts for situations where focus enters the page from the URL bar.\n * @param {Event} e\n */\n function onInitialPointerMove(e) {\n // Work around a Safari quirk that fires a mousemove on whenever the\n // window blurs, even if you're tabbing out of the page. \u00AF\\_(\u30C4)_/\u00AF\n if (e.target.nodeName && e.target.nodeName.toLowerCase() === 'html') {\n return;\n }\n\n hadKeyboardEvent = false;\n removeInitialPointerMoveListeners();\n }\n\n // For some kinds of state, we are interested in changes at the global scope\n // only. For example, global pointer input, global key presses and global\n // visibility change should affect the state at every scope:\n document.addEventListener('keydown', onKeyDown, true);\n document.addEventListener('mousedown', onPointerDown, true);\n document.addEventListener('pointerdown', onPointerDown, true);\n document.addEventListener('touchstart', onPointerDown, true);\n document.addEventListener('visibilitychange', onVisibilityChange, true);\n\n addInitialPointerMoveListeners();\n\n // For focus and blur, we specifically care about state changes in the local\n // scope. This is because focus / blur events that originate from within a\n // shadow root are not re-dispatched from the host element if it was already\n // the active element in its own scope:\n scope.addEventListener('focus', onFocus, true);\n scope.addEventListener('blur', onBlur, true);\n\n // We detect that a node is a ShadowRoot by ensuring that it is a\n // DocumentFragment and also has a host property. This check covers native\n // implementation and polyfill implementation transparently. If we only cared\n // about the native implementation, we could just check if the scope was\n // an instance of a ShadowRoot.\n if (scope.nodeType === Node.DOCUMENT_FRAGMENT_NODE && scope.host) {\n // Since a ShadowRoot is a special kind of DocumentFragment, it does not\n // have a root element to add a class to. So, we add this attribute to the\n // host element instead:\n scope.host.setAttribute('data-js-focus-visible', '');\n } else if (scope.nodeType === Node.DOCUMENT_NODE) {\n document.documentElement.classList.add('js-focus-visible');\n document.documentElement.setAttribute('data-js-focus-visible', '');\n }\n }\n\n // It is important to wrap all references to global window and document in\n // these checks to support server-side rendering use cases\n // @see https://github.com/WICG/focus-visible/issues/199\n if (typeof window !== 'undefined' && typeof document !== 'undefined') {\n // Make the polyfill helper globally available. This can be used as a signal\n // to interested libraries that wish to coordinate with the polyfill for e.g.,\n // applying the polyfill to a shadow root:\n window.applyFocusVisiblePolyfill = applyFocusVisiblePolyfill;\n\n // Notify interested libraries of the polyfill's presence, in case the\n // polyfill was loaded lazily:\n var event;\n\n try {\n event = new CustomEvent('focus-visible-polyfill-ready');\n } catch (error) {\n // IE11 does not support using CustomEvent as a constructor directly:\n event = document.createEvent('CustomEvent');\n event.initCustomEvent('focus-visible-polyfill-ready', false, false, {});\n }\n\n window.dispatchEvent(event);\n }\n\n if (typeof document !== 'undefined') {\n // Apply the polyfill to the global document, so that no JavaScript\n // coordination is required to use the polyfill in the top-level document:\n applyFocusVisiblePolyfill(document);\n }\n\n})));\n", "(function(global) {\r\n /**\r\n * Polyfill URLSearchParams\r\n *\r\n * Inspired from : https://github.com/WebReflection/url-search-params/blob/master/src/url-search-params.js\r\n */\r\n\r\n var checkIfIteratorIsSupported = function() {\r\n try {\r\n return !!Symbol.iterator;\r\n } catch (error) {\r\n return false;\r\n }\r\n };\r\n\r\n\r\n var iteratorSupported = checkIfIteratorIsSupported();\r\n\r\n var createIterator = function(items) {\r\n var iterator = {\r\n next: function() {\r\n var value = items.shift();\r\n return { done: value === void 0, value: value };\r\n }\r\n };\r\n\r\n if (iteratorSupported) {\r\n iterator[Symbol.iterator] = function() {\r\n return iterator;\r\n };\r\n }\r\n\r\n return iterator;\r\n };\r\n\r\n /**\r\n * Search param name and values should be encoded according to https://url.spec.whatwg.org/#urlencoded-serializing\r\n * encodeURIComponent() produces the same result except encoding spaces as `%20` instead of `+`.\r\n */\r\n var serializeParam = function(value) {\r\n return encodeURIComponent(value).replace(/%20/g, '+');\r\n };\r\n\r\n var deserializeParam = function(value) {\r\n return decodeURIComponent(String(value).replace(/\\+/g, ' '));\r\n };\r\n\r\n var polyfillURLSearchParams = function() {\r\n\r\n var URLSearchParams = function(searchString) {\r\n Object.defineProperty(this, '_entries', { writable: true, value: {} });\r\n var typeofSearchString = typeof searchString;\r\n\r\n if (typeofSearchString === 'undefined') {\r\n // do nothing\r\n } else if (typeofSearchString === 'string') {\r\n if (searchString !== '') {\r\n this._fromString(searchString);\r\n }\r\n } else if (searchString instanceof URLSearchParams) {\r\n var _this = this;\r\n searchString.forEach(function(value, name) {\r\n _this.append(name, value);\r\n });\r\n } else if ((searchString !== null) && (typeofSearchString === 'object')) {\r\n if (Object.prototype.toString.call(searchString) === '[object Array]') {\r\n for (var i = 0; i < searchString.length; i++) {\r\n var entry = searchString[i];\r\n if ((Object.prototype.toString.call(entry) === '[object Array]') || (entry.length !== 2)) {\r\n this.append(entry[0], entry[1]);\r\n } else {\r\n throw new TypeError('Expected [string, any] as entry at index ' + i + ' of URLSearchParams\\'s input');\r\n }\r\n }\r\n } else {\r\n for (var key in searchString) {\r\n if (searchString.hasOwnProperty(key)) {\r\n this.append(key, searchString[key]);\r\n }\r\n }\r\n }\r\n } else {\r\n throw new TypeError('Unsupported input\\'s type for URLSearchParams');\r\n }\r\n };\r\n\r\n var proto = URLSearchParams.prototype;\r\n\r\n proto.append = function(name, value) {\r\n if (name in this._entries) {\r\n this._entries[name].push(String(value));\r\n } else {\r\n this._entries[name] = [String(value)];\r\n }\r\n };\r\n\r\n proto.delete = function(name) {\r\n delete this._entries[name];\r\n };\r\n\r\n proto.get = function(name) {\r\n return (name in this._entries) ? this._entries[name][0] : null;\r\n };\r\n\r\n proto.getAll = function(name) {\r\n return (name in this._entries) ? this._entries[name].slice(0) : [];\r\n };\r\n\r\n proto.has = function(name) {\r\n return (name in this._entries);\r\n };\r\n\r\n proto.set = function(name, value) {\r\n this._entries[name] = [String(value)];\r\n };\r\n\r\n proto.forEach = function(callback, thisArg) {\r\n var entries;\r\n for (var name in this._entries) {\r\n if (this._entries.hasOwnProperty(name)) {\r\n entries = this._entries[name];\r\n for (var i = 0; i < entries.length; i++) {\r\n callback.call(thisArg, entries[i], name, this);\r\n }\r\n }\r\n }\r\n };\r\n\r\n proto.keys = function() {\r\n var items = [];\r\n this.forEach(function(value, name) {\r\n items.push(name);\r\n });\r\n return createIterator(items);\r\n };\r\n\r\n proto.values = function() {\r\n var items = [];\r\n this.forEach(function(value) {\r\n items.push(value);\r\n });\r\n return createIterator(items);\r\n };\r\n\r\n proto.entries = function() {\r\n var items = [];\r\n this.forEach(function(value, name) {\r\n items.push([name, value]);\r\n });\r\n return createIterator(items);\r\n };\r\n\r\n if (iteratorSupported) {\r\n proto[Symbol.iterator] = proto.entries;\r\n }\r\n\r\n proto.toString = function() {\r\n var searchArray = [];\r\n this.forEach(function(value, name) {\r\n searchArray.push(serializeParam(name) + '=' + serializeParam(value));\r\n });\r\n return searchArray.join('&');\r\n };\r\n\r\n\r\n global.URLSearchParams = URLSearchParams;\r\n };\r\n\r\n var checkIfURLSearchParamsSupported = function() {\r\n try {\r\n var URLSearchParams = global.URLSearchParams;\r\n\r\n return (\r\n (new URLSearchParams('?a=1').toString() === 'a=1') &&\r\n (typeof URLSearchParams.prototype.set === 'function') &&\r\n (typeof URLSearchParams.prototype.entries === 'function')\r\n );\r\n } catch (e) {\r\n return false;\r\n }\r\n };\r\n\r\n if (!checkIfURLSearchParamsSupported()) {\r\n polyfillURLSearchParams();\r\n }\r\n\r\n var proto = global.URLSearchParams.prototype;\r\n\r\n if (typeof proto.sort !== 'function') {\r\n proto.sort = function() {\r\n var _this = this;\r\n var items = [];\r\n this.forEach(function(value, name) {\r\n items.push([name, value]);\r\n if (!_this._entries) {\r\n _this.delete(name);\r\n }\r\n });\r\n items.sort(function(a, b) {\r\n if (a[0] < b[0]) {\r\n return -1;\r\n } else if (a[0] > b[0]) {\r\n return +1;\r\n } else {\r\n return 0;\r\n }\r\n });\r\n if (_this._entries) { // force reset because IE keeps keys index\r\n _this._entries = {};\r\n }\r\n for (var i = 0; i < items.length; i++) {\r\n this.append(items[i][0], items[i][1]);\r\n }\r\n };\r\n }\r\n\r\n if (typeof proto._fromString !== 'function') {\r\n Object.defineProperty(proto, '_fromString', {\r\n enumerable: false,\r\n configurable: false,\r\n writable: false,\r\n value: function(searchString) {\r\n if (this._entries) {\r\n this._entries = {};\r\n } else {\r\n var keys = [];\r\n this.forEach(function(value, name) {\r\n keys.push(name);\r\n });\r\n for (var i = 0; i < keys.length; i++) {\r\n this.delete(keys[i]);\r\n }\r\n }\r\n\r\n searchString = searchString.replace(/^\\?/, '');\r\n var attributes = searchString.split('&');\r\n var attribute;\r\n for (var i = 0; i < attributes.length; i++) {\r\n attribute = attributes[i].split('=');\r\n this.append(\r\n deserializeParam(attribute[0]),\r\n (attribute.length > 1) ? deserializeParam(attribute[1]) : ''\r\n );\r\n }\r\n }\r\n });\r\n }\r\n\r\n // HTMLAnchorElement\r\n\r\n})(\r\n (typeof global !== 'undefined') ? global\r\n : ((typeof window !== 'undefined') ? window\r\n : ((typeof self !== 'undefined') ? self : this))\r\n);\r\n\r\n(function(global) {\r\n /**\r\n * Polyfill URL\r\n *\r\n * Inspired from : https://github.com/arv/DOM-URL-Polyfill/blob/master/src/url.js\r\n */\r\n\r\n var checkIfURLIsSupported = function() {\r\n try {\r\n var u = new global.URL('b', 'http://a');\r\n u.pathname = 'c d';\r\n return (u.href === 'http://a/c%20d') && u.searchParams;\r\n } catch (e) {\r\n return false;\r\n }\r\n };\r\n\r\n\r\n var polyfillURL = function() {\r\n var _URL = global.URL;\r\n\r\n var URL = function(url, base) {\r\n if (typeof url !== 'string') url = String(url);\r\n if (base && typeof base !== 'string') base = String(base);\r\n\r\n // Only create another document if the base is different from current location.\r\n var doc = document, baseElement;\r\n if (base && (global.location === void 0 || base !== global.location.href)) {\r\n base = base.toLowerCase();\r\n doc = document.implementation.createHTMLDocument('');\r\n baseElement = doc.createElement('base');\r\n baseElement.href = base;\r\n doc.head.appendChild(baseElement);\r\n try {\r\n if (baseElement.href.indexOf(base) !== 0) throw new Error(baseElement.href);\r\n } catch (err) {\r\n throw new Error('URL unable to set base ' + base + ' due to ' + err);\r\n }\r\n }\r\n\r\n var anchorElement = doc.createElement('a');\r\n anchorElement.href = url;\r\n if (baseElement) {\r\n doc.body.appendChild(anchorElement);\r\n anchorElement.href = anchorElement.href; // force href to refresh\r\n }\r\n\r\n var inputElement = doc.createElement('input');\r\n inputElement.type = 'url';\r\n inputElement.value = url;\r\n\r\n if (anchorElement.protocol === ':' || !/:/.test(anchorElement.href) || (!inputElement.checkValidity() && !base)) {\r\n throw new TypeError('Invalid URL');\r\n }\r\n\r\n Object.defineProperty(this, '_anchorElement', {\r\n value: anchorElement\r\n });\r\n\r\n\r\n // create a linked searchParams which reflect its changes on URL\r\n var searchParams = new global.URLSearchParams(this.search);\r\n var enableSearchUpdate = true;\r\n var enableSearchParamsUpdate = true;\r\n var _this = this;\r\n ['append', 'delete', 'set'].forEach(function(methodName) {\r\n var method = searchParams[methodName];\r\n searchParams[methodName] = function() {\r\n method.apply(searchParams, arguments);\r\n if (enableSearchUpdate) {\r\n enableSearchParamsUpdate = false;\r\n _this.search = searchParams.toString();\r\n enableSearchParamsUpdate = true;\r\n }\r\n };\r\n });\r\n\r\n Object.defineProperty(this, 'searchParams', {\r\n value: searchParams,\r\n enumerable: true\r\n });\r\n\r\n var search = void 0;\r\n Object.defineProperty(this, '_updateSearchParams', {\r\n enumerable: false,\r\n configurable: false,\r\n writable: false,\r\n value: function() {\r\n if (this.search !== search) {\r\n search = this.search;\r\n if (enableSearchParamsUpdate) {\r\n enableSearchUpdate = false;\r\n this.searchParams._fromString(this.search);\r\n enableSearchUpdate = true;\r\n }\r\n }\r\n }\r\n });\r\n };\r\n\r\n var proto = URL.prototype;\r\n\r\n var linkURLWithAnchorAttribute = function(attributeName) {\r\n Object.defineProperty(proto, attributeName, {\r\n get: function() {\r\n return this._anchorElement[attributeName];\r\n },\r\n set: function(value) {\r\n this._anchorElement[attributeName] = value;\r\n },\r\n enumerable: true\r\n });\r\n };\r\n\r\n ['hash', 'host', 'hostname', 'port', 'protocol']\r\n .forEach(function(attributeName) {\r\n linkURLWithAnchorAttribute(attributeName);\r\n });\r\n\r\n Object.defineProperty(proto, 'search', {\r\n get: function() {\r\n return this._anchorElement['search'];\r\n },\r\n set: function(value) {\r\n this._anchorElement['search'] = value;\r\n this._updateSearchParams();\r\n },\r\n enumerable: true\r\n });\r\n\r\n Object.defineProperties(proto, {\r\n\r\n 'toString': {\r\n get: function() {\r\n var _this = this;\r\n return function() {\r\n return _this.href;\r\n };\r\n }\r\n },\r\n\r\n 'href': {\r\n get: function() {\r\n return this._anchorElement.href.replace(/\\?$/, '');\r\n },\r\n set: function(value) {\r\n this._anchorElement.href = value;\r\n this._updateSearchParams();\r\n },\r\n enumerable: true\r\n },\r\n\r\n 'pathname': {\r\n get: function() {\r\n return this._anchorElement.pathname.replace(/(^\\/?)/, '/');\r\n },\r\n set: function(value) {\r\n this._anchorElement.pathname = value;\r\n },\r\n enumerable: true\r\n },\r\n\r\n 'origin': {\r\n get: function() {\r\n // get expected port from protocol\r\n var expectedPort = { 'http:': 80, 'https:': 443, 'ftp:': 21 }[this._anchorElement.protocol];\r\n // add port to origin if, expected port is different than actual port\r\n // and it is not empty f.e http://foo:8080\r\n // 8080 != 80 && 8080 != ''\r\n var addPortToOrigin = this._anchorElement.port != expectedPort &&\r\n this._anchorElement.port !== '';\r\n\r\n return this._anchorElement.protocol +\r\n '//' +\r\n this._anchorElement.hostname +\r\n (addPortToOrigin ? (':' + this._anchorElement.port) : '');\r\n },\r\n enumerable: true\r\n },\r\n\r\n 'password': { // TODO\r\n get: function() {\r\n return '';\r\n },\r\n set: function(value) {\r\n },\r\n enumerable: true\r\n },\r\n\r\n 'username': { // TODO\r\n get: function() {\r\n return '';\r\n },\r\n set: function(value) {\r\n },\r\n enumerable: true\r\n },\r\n });\r\n\r\n URL.createObjectURL = function(blob) {\r\n return _URL.createObjectURL.apply(_URL, arguments);\r\n };\r\n\r\n URL.revokeObjectURL = function(url) {\r\n return _URL.revokeObjectURL.apply(_URL, arguments);\r\n };\r\n\r\n global.URL = URL;\r\n\r\n };\r\n\r\n if (!checkIfURLIsSupported()) {\r\n polyfillURL();\r\n }\r\n\r\n if ((global.location !== void 0) && !('origin' in global.location)) {\r\n var getOrigin = function() {\r\n return global.location.protocol + '//' + global.location.hostname + (global.location.port ? 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'copy' : _options$action,\n container = options.container,\n target = options.target,\n text = options.text; // Sets the `action` to be performed which can be either 'copy' or 'cut'.\n\n if (action !== 'copy' && action !== 'cut') {\n throw new Error('Invalid \"action\" value, use either \"copy\" or \"cut\"');\n } // Sets the `target` property using an element that will be have its content copied.\n\n\n if (target !== undefined) {\n if (target && _typeof(target) === 'object' && target.nodeType === 1) {\n if (action === 'copy' && target.hasAttribute('disabled')) {\n throw new Error('Invalid \"target\" attribute. Please use \"readonly\" instead of \"disabled\" attribute');\n }\n\n if (action === 'cut' && (target.hasAttribute('readonly') || target.hasAttribute('disabled'))) {\n throw new Error('Invalid \"target\" attribute. You can\\'t cut text from elements with \"readonly\" or \"disabled\" attributes');\n }\n } else {\n throw new Error('Invalid \"target\" value, use a valid Element');\n }\n } // Define selection strategy based on `text` property.\n\n\n if (text) {\n return actions_copy(text, {\n container: container\n });\n } // Defines which selection strategy based on `target` property.\n\n\n if (target) {\n return action === 'cut' ? actions_cut(target) : actions_copy(target, {\n container: container\n });\n }\n};\n\n/* harmony default export */ var actions_default = (ClipboardActionDefault);\n;// CONCATENATED MODULE: ./src/clipboard.js\nfunction clipboard_typeof(obj) { \"@babel/helpers - typeof\"; if (typeof Symbol === \"function\" && typeof Symbol.iterator === \"symbol\") { clipboard_typeof = function _typeof(obj) { return typeof obj; }; } else { clipboard_typeof = function _typeof(obj) { return obj && typeof Symbol === \"function\" && obj.constructor === Symbol && obj !== Symbol.prototype ? \"symbol\" : typeof obj; }; } return clipboard_typeof(obj); }\n\nfunction _classCallCheck(instance, Constructor) { if (!(instance instanceof Constructor)) { throw new TypeError(\"Cannot call a class as a function\"); } }\n\nfunction _defineProperties(target, props) { for (var i = 0; i < props.length; i++) { var descriptor = props[i]; descriptor.enumerable = descriptor.enumerable || false; descriptor.configurable = true; if (\"value\" in descriptor) descriptor.writable = true; Object.defineProperty(target, descriptor.key, descriptor); } }\n\nfunction _createClass(Constructor, protoProps, staticProps) { if (protoProps) _defineProperties(Constructor.prototype, protoProps); if (staticProps) _defineProperties(Constructor, staticProps); return Constructor; }\n\nfunction _inherits(subClass, superClass) { if (typeof superClass !== \"function\" && superClass !== null) { throw new TypeError(\"Super expression must either be null or a function\"); } subClass.prototype = Object.create(superClass && superClass.prototype, { constructor: { value: subClass, writable: true, configurable: true } }); if (superClass) _setPrototypeOf(subClass, superClass); }\n\nfunction _setPrototypeOf(o, p) { _setPrototypeOf = Object.setPrototypeOf || function _setPrototypeOf(o, p) { o.__proto__ = p; return o; }; return _setPrototypeOf(o, p); }\n\nfunction _createSuper(Derived) { var hasNativeReflectConstruct = _isNativeReflectConstruct(); return function _createSuperInternal() { var Super = _getPrototypeOf(Derived), result; if (hasNativeReflectConstruct) { var NewTarget = _getPrototypeOf(this).constructor; result = Reflect.construct(Super, arguments, NewTarget); } else { result = Super.apply(this, arguments); } return _possibleConstructorReturn(this, result); }; }\n\nfunction _possibleConstructorReturn(self, call) { if (call && (clipboard_typeof(call) === \"object\" || typeof call === \"function\")) { return call; } return _assertThisInitialized(self); }\n\nfunction _assertThisInitialized(self) { if (self === void 0) { throw new ReferenceError(\"this hasn't been initialised - super() hasn't been called\"); } return self; }\n\nfunction _isNativeReflectConstruct() { if (typeof Reflect === \"undefined\" || !Reflect.construct) return false; if (Reflect.construct.sham) return false; if (typeof Proxy === \"function\") return true; try { Date.prototype.toString.call(Reflect.construct(Date, [], function () {})); return true; } catch (e) { return false; } }\n\nfunction _getPrototypeOf(o) { _getPrototypeOf = Object.setPrototypeOf ? Object.getPrototypeOf : function _getPrototypeOf(o) { return o.__proto__ || Object.getPrototypeOf(o); }; return _getPrototypeOf(o); }\n\n\n\n\n\n\n/**\n * Helper function to retrieve attribute value.\n * @param {String} suffix\n * @param {Element} element\n */\n\nfunction getAttributeValue(suffix, element) {\n var attribute = \"data-clipboard-\".concat(suffix);\n\n if (!element.hasAttribute(attribute)) {\n return;\n }\n\n return element.getAttribute(attribute);\n}\n/**\n * Base class which takes one or more elements, adds event listeners to them,\n * and instantiates a new `ClipboardAction` on each click.\n */\n\n\nvar Clipboard = /*#__PURE__*/function (_Emitter) {\n _inherits(Clipboard, _Emitter);\n\n var _super = _createSuper(Clipboard);\n\n /**\n * @param {String|HTMLElement|HTMLCollection|NodeList} trigger\n * @param {Object} options\n */\n function Clipboard(trigger, options) {\n var _this;\n\n _classCallCheck(this, Clipboard);\n\n _this = _super.call(this);\n\n _this.resolveOptions(options);\n\n _this.listenClick(trigger);\n\n return _this;\n }\n /**\n * Defines if attributes would be resolved using internal setter functions\n * or custom functions that were passed in the constructor.\n * @param {Object} options\n */\n\n\n _createClass(Clipboard, [{\n key: \"resolveOptions\",\n value: function resolveOptions() {\n var options = arguments.length > 0 && arguments[0] !== undefined ? arguments[0] : {};\n this.action = typeof options.action === 'function' ? options.action : this.defaultAction;\n this.target = typeof options.target === 'function' ? options.target : this.defaultTarget;\n this.text = typeof options.text === 'function' ? options.text : this.defaultText;\n this.container = clipboard_typeof(options.container) === 'object' ? options.container : document.body;\n }\n /**\n * Adds a click event listener to the passed trigger.\n * @param {String|HTMLElement|HTMLCollection|NodeList} trigger\n */\n\n }, {\n key: \"listenClick\",\n value: function listenClick(trigger) {\n var _this2 = this;\n\n this.listener = listen_default()(trigger, 'click', function (e) {\n return _this2.onClick(e);\n });\n }\n /**\n * Defines a new `ClipboardAction` on each click event.\n * @param {Event} e\n */\n\n }, {\n key: \"onClick\",\n value: function onClick(e) {\n var trigger = e.delegateTarget || e.currentTarget;\n var action = this.action(trigger) || 'copy';\n var text = actions_default({\n action: action,\n container: this.container,\n target: this.target(trigger),\n text: this.text(trigger)\n }); // Fires an event based on the copy operation result.\n\n this.emit(text ? 'success' : 'error', {\n action: action,\n text: text,\n trigger: trigger,\n clearSelection: function clearSelection() {\n if (trigger) {\n trigger.focus();\n }\n\n window.getSelection().removeAllRanges();\n }\n });\n }\n /**\n * Default `action` lookup function.\n * @param {Element} trigger\n */\n\n }, {\n key: \"defaultAction\",\n value: function defaultAction(trigger) {\n return getAttributeValue('action', trigger);\n }\n /**\n * Default `target` lookup function.\n * @param {Element} trigger\n */\n\n }, {\n key: \"defaultTarget\",\n value: function defaultTarget(trigger) {\n var selector = getAttributeValue('target', trigger);\n\n if (selector) {\n return document.querySelector(selector);\n }\n }\n /**\n * Allow fire programmatically a copy action\n * @param {String|HTMLElement} target\n * @param {Object} options\n * @returns Text copied.\n */\n\n }, {\n key: \"defaultText\",\n\n /**\n * Default `text` lookup function.\n * @param {Element} trigger\n */\n value: function defaultText(trigger) {\n return getAttributeValue('text', trigger);\n }\n /**\n * Destroy lifecycle.\n */\n\n }, {\n key: \"destroy\",\n value: function destroy() {\n this.listener.destroy();\n }\n }], [{\n key: \"copy\",\n value: function copy(target) {\n var options = arguments.length > 1 && arguments[1] !== undefined ? arguments[1] : {\n container: document.body\n };\n return actions_copy(target, options);\n }\n /**\n * Allow fire programmatically a cut action\n * @param {String|HTMLElement} target\n * @returns Text cutted.\n */\n\n }, {\n key: \"cut\",\n value: function cut(target) {\n return actions_cut(target);\n }\n /**\n * Returns the support of the given action, or all actions if no action is\n * given.\n * @param {String} [action]\n */\n\n }, {\n key: \"isSupported\",\n value: function isSupported() {\n var action = arguments.length > 0 && arguments[0] !== undefined ? arguments[0] : ['copy', 'cut'];\n var actions = typeof action === 'string' ? [action] : action;\n var support = !!document.queryCommandSupported;\n actions.forEach(function (action) {\n support = support && !!document.queryCommandSupported(action);\n });\n return support;\n }\n }]);\n\n return Clipboard;\n}((tiny_emitter_default()));\n\n/* harmony default export */ var clipboard = (Clipboard);\n\n/***/ }),\n\n/***/ 828:\n/***/ (function(module) {\n\nvar DOCUMENT_NODE_TYPE = 9;\n\n/**\n * A polyfill for Element.matches()\n */\nif (typeof Element !== 'undefined' && !Element.prototype.matches) {\n var proto = Element.prototype;\n\n proto.matches = proto.matchesSelector ||\n proto.mozMatchesSelector ||\n proto.msMatchesSelector ||\n proto.oMatchesSelector ||\n proto.webkitMatchesSelector;\n}\n\n/**\n * Finds the closest parent that matches a selector.\n *\n * @param {Element} element\n * @param {String} selector\n * @return {Function}\n */\nfunction closest (element, selector) {\n while (element && element.nodeType !== DOCUMENT_NODE_TYPE) {\n if (typeof element.matches === 'function' &&\n element.matches(selector)) {\n return element;\n }\n element = element.parentNode;\n }\n}\n\nmodule.exports = closest;\n\n\n/***/ }),\n\n/***/ 438:\n/***/ (function(module, __unused_webpack_exports, __webpack_require__) {\n\nvar closest = __webpack_require__(828);\n\n/**\n * Delegates event to a selector.\n *\n * @param {Element} element\n * @param {String} selector\n * @param {String} type\n * @param {Function} callback\n * @param {Boolean} useCapture\n * @return {Object}\n */\nfunction _delegate(element, selector, type, callback, useCapture) {\n var listenerFn = listener.apply(this, arguments);\n\n element.addEventListener(type, listenerFn, useCapture);\n\n return {\n destroy: function() {\n element.removeEventListener(type, listenerFn, useCapture);\n }\n }\n}\n\n/**\n * Delegates event to a selector.\n *\n * @param {Element|String|Array} [elements]\n * @param {String} selector\n * @param {String} type\n * @param {Function} callback\n * @param {Boolean} useCapture\n * @return {Object}\n */\nfunction delegate(elements, selector, type, callback, useCapture) {\n // Handle the regular Element usage\n if (typeof elements.addEventListener === 'function') {\n return _delegate.apply(null, arguments);\n }\n\n // Handle Element-less usage, it defaults to global delegation\n if (typeof type === 'function') {\n // Use `document` as the first parameter, then apply arguments\n // This is a short way to .unshift `arguments` without running into deoptimizations\n return _delegate.bind(null, document).apply(null, arguments);\n }\n\n // Handle Selector-based usage\n if (typeof elements === 'string') {\n elements = document.querySelectorAll(elements);\n }\n\n // Handle Array-like based usage\n return Array.prototype.map.call(elements, function (element) {\n return _delegate(element, selector, type, callback, useCapture);\n });\n}\n\n/**\n * Finds closest match and invokes callback.\n *\n * @param {Element} element\n * @param {String} selector\n * @param {String} type\n * @param {Function} callback\n * @return {Function}\n */\nfunction listener(element, selector, type, callback) {\n return function(e) {\n e.delegateTarget = closest(e.target, selector);\n\n if (e.delegateTarget) {\n callback.call(element, e);\n }\n }\n}\n\nmodule.exports = delegate;\n\n\n/***/ }),\n\n/***/ 879:\n/***/ (function(__unused_webpack_module, exports) {\n\n/**\n * Check if argument is a HTML element.\n *\n * @param {Object} value\n * @return {Boolean}\n */\nexports.node = function(value) {\n return value !== undefined\n && value instanceof HTMLElement\n && value.nodeType === 1;\n};\n\n/**\n * Check if argument is a list of HTML elements.\n *\n * @param {Object} value\n * @return {Boolean}\n */\nexports.nodeList = function(value) {\n var type = Object.prototype.toString.call(value);\n\n return value !== undefined\n && (type === '[object NodeList]' || type === '[object HTMLCollection]')\n && ('length' in value)\n && (value.length === 0 || exports.node(value[0]));\n};\n\n/**\n * Check if argument is a string.\n *\n * @param {Object} value\n * @return {Boolean}\n */\nexports.string = function(value) {\n return typeof value === 'string'\n || value instanceof String;\n};\n\n/**\n * Check if argument is a function.\n *\n * @param {Object} value\n * @return {Boolean}\n */\nexports.fn = function(value) {\n var type = Object.prototype.toString.call(value);\n\n return type === '[object Function]';\n};\n\n\n/***/ }),\n\n/***/ 370:\n/***/ (function(module, __unused_webpack_exports, __webpack_require__) {\n\nvar is = __webpack_require__(879);\nvar delegate = __webpack_require__(438);\n\n/**\n * Validates all params and calls the right\n * listener function based on its target type.\n *\n * @param {String|HTMLElement|HTMLCollection|NodeList} target\n * @param {String} type\n * @param {Function} callback\n * @return {Object}\n */\nfunction listen(target, type, callback) {\n if (!target && !type && !callback) {\n throw new Error('Missing required arguments');\n }\n\n if (!is.string(type)) {\n throw new TypeError('Second argument must be a String');\n }\n\n if (!is.fn(callback)) {\n throw new TypeError('Third argument must be a Function');\n }\n\n if (is.node(target)) {\n return listenNode(target, type, callback);\n }\n else if (is.nodeList(target)) {\n return listenNodeList(target, type, callback);\n }\n else if (is.string(target)) {\n return listenSelector(target, type, callback);\n }\n else {\n throw new TypeError('First argument must be a String, HTMLElement, HTMLCollection, or NodeList');\n }\n}\n\n/**\n * Adds an event listener to a HTML element\n * and returns a remove listener function.\n *\n * @param {HTMLElement} node\n * @param {String} type\n * @param {Function} callback\n * @return {Object}\n */\nfunction listenNode(node, type, callback) {\n node.addEventListener(type, callback);\n\n return {\n destroy: function() {\n node.removeEventListener(type, callback);\n }\n }\n}\n\n/**\n * Add an event listener to a list of HTML elements\n * and returns a remove listener function.\n *\n * @param {NodeList|HTMLCollection} nodeList\n * @param {String} type\n * @param {Function} callback\n * @return {Object}\n */\nfunction listenNodeList(nodeList, type, callback) {\n Array.prototype.forEach.call(nodeList, function(node) {\n node.addEventListener(type, callback);\n });\n\n return {\n destroy: function() {\n Array.prototype.forEach.call(nodeList, function(node) {\n node.removeEventListener(type, callback);\n });\n }\n }\n}\n\n/**\n * Add an event listener to a selector\n * and returns a remove listener function.\n *\n * @param {String} selector\n * @param {String} type\n * @param {Function} callback\n * @return {Object}\n */\nfunction listenSelector(selector, type, callback) {\n return delegate(document.body, selector, type, callback);\n}\n\nmodule.exports = listen;\n\n\n/***/ }),\n\n/***/ 817:\n/***/ (function(module) {\n\nfunction select(element) {\n var selectedText;\n\n if (element.nodeName === 'SELECT') {\n element.focus();\n\n selectedText = element.value;\n }\n else if (element.nodeName === 'INPUT' || element.nodeName === 'TEXTAREA') {\n var isReadOnly = element.hasAttribute('readonly');\n\n if (!isReadOnly) {\n element.setAttribute('readonly', '');\n }\n\n element.select();\n element.setSelectionRange(0, element.value.length);\n\n if (!isReadOnly) {\n element.removeAttribute('readonly');\n }\n\n selectedText = element.value;\n }\n else {\n if (element.hasAttribute('contenteditable')) {\n element.focus();\n }\n\n var selection = window.getSelection();\n var range = document.createRange();\n\n range.selectNodeContents(element);\n selection.removeAllRanges();\n selection.addRange(range);\n\n selectedText = selection.toString();\n }\n\n return selectedText;\n}\n\nmodule.exports = select;\n\n\n/***/ }),\n\n/***/ 279:\n/***/ (function(module) {\n\nfunction E () {\n // Keep this empty so it's easier to inherit from\n // (via https://github.com/lipsmack from https://github.com/scottcorgan/tiny-emitter/issues/3)\n}\n\nE.prototype = {\n on: function (name, callback, ctx) {\n var e = this.e || (this.e = {});\n\n (e[name] || (e[name] = [])).push({\n fn: callback,\n ctx: ctx\n });\n\n return this;\n },\n\n once: function (name, callback, ctx) {\n var self = this;\n function listener () {\n self.off(name, listener);\n callback.apply(ctx, arguments);\n };\n\n listener._ = callback\n return this.on(name, listener, ctx);\n },\n\n emit: function (name) {\n var data = [].slice.call(arguments, 1);\n var evtArr = ((this.e || (this.e = {}))[name] || []).slice();\n var i = 0;\n var len = evtArr.length;\n\n for (i; i < len; i++) {\n evtArr[i].fn.apply(evtArr[i].ctx, data);\n }\n\n return this;\n },\n\n off: function (name, callback) {\n var e = this.e || (this.e = {});\n var evts = e[name];\n var liveEvents = [];\n\n if (evts && callback) {\n for (var i = 0, len = evts.length; i < len; i++) {\n if (evts[i].fn !== callback && evts[i].fn._ !== callback)\n liveEvents.push(evts[i]);\n }\n }\n\n // Remove event from queue to prevent memory leak\n // Suggested by https://github.com/lazd\n // Ref: https://github.com/scottcorgan/tiny-emitter/commit/c6ebfaa9bc973b33d110a84a307742b7cf94c953#commitcomment-5024910\n\n (liveEvents.length)\n ? e[name] = liveEvents\n : delete e[name];\n\n return this;\n }\n};\n\nmodule.exports = E;\nmodule.exports.TinyEmitter = E;\n\n\n/***/ })\n\n/******/ \t});\n/************************************************************************/\n/******/ \t// The module cache\n/******/ \tvar __webpack_module_cache__ = {};\n/******/ \t\n/******/ \t// The require function\n/******/ \tfunction __webpack_require__(moduleId) {\n/******/ \t\t// Check if module is in cache\n/******/ \t\tif(__webpack_module_cache__[moduleId]) {\n/******/ \t\t\treturn __webpack_module_cache__[moduleId].exports;\n/******/ \t\t}\n/******/ \t\t// Create a new module (and put it into the cache)\n/******/ \t\tvar module = __webpack_module_cache__[moduleId] = {\n/******/ \t\t\t// no module.id needed\n/******/ \t\t\t// no module.loaded needed\n/******/ \t\t\texports: {}\n/******/ \t\t};\n/******/ \t\n/******/ \t\t// Execute the module function\n/******/ \t\t__webpack_modules__[moduleId](module, module.exports, __webpack_require__);\n/******/ \t\n/******/ \t\t// Return the exports of the module\n/******/ \t\treturn module.exports;\n/******/ \t}\n/******/ \t\n/************************************************************************/\n/******/ \t/* webpack/runtime/compat get default export */\n/******/ \t!function() {\n/******/ \t\t// getDefaultExport function for compatibility with non-harmony modules\n/******/ \t\t__webpack_require__.n = function(module) {\n/******/ \t\t\tvar getter = module && module.__esModule ?\n/******/ \t\t\t\tfunction() { return module['default']; } :\n/******/ \t\t\t\tfunction() { return module; };\n/******/ \t\t\t__webpack_require__.d(getter, { a: getter });\n/******/ \t\t\treturn getter;\n/******/ \t\t};\n/******/ \t}();\n/******/ \t\n/******/ \t/* webpack/runtime/define property getters */\n/******/ \t!function() {\n/******/ \t\t// define getter functions for harmony exports\n/******/ \t\t__webpack_require__.d = function(exports, definition) {\n/******/ \t\t\tfor(var key in definition) {\n/******/ \t\t\t\tif(__webpack_require__.o(definition, key) && !__webpack_require__.o(exports, key)) {\n/******/ \t\t\t\t\tObject.defineProperty(exports, key, { enumerable: true, get: definition[key] });\n/******/ \t\t\t\t}\n/******/ \t\t\t}\n/******/ \t\t};\n/******/ \t}();\n/******/ \t\n/******/ \t/* webpack/runtime/hasOwnProperty shorthand */\n/******/ \t!function() {\n/******/ \t\t__webpack_require__.o = function(obj, prop) { return Object.prototype.hasOwnProperty.call(obj, prop); }\n/******/ \t}();\n/******/ \t\n/************************************************************************/\n/******/ \t// module exports must be returned from runtime so entry inlining is disabled\n/******/ \t// startup\n/******/ \t// Load entry module and return exports\n/******/ \treturn __webpack_require__(686);\n/******/ })()\n.default;\n});", "/*!\n * escape-html\n * Copyright(c) 2012-2013 TJ Holowaychuk\n * Copyright(c) 2015 Andreas Lubbe\n * Copyright(c) 2015 Tiancheng \"Timothy\" Gu\n * MIT Licensed\n */\n\n'use strict';\n\n/**\n * Module variables.\n * @private\n */\n\nvar matchHtmlRegExp = /[\"'&<>]/;\n\n/**\n * Module exports.\n * @public\n */\n\nmodule.exports = escapeHtml;\n\n/**\n * Escape special characters in the given string of html.\n *\n * @param {string} string The string to escape for inserting into HTML\n * @return {string}\n * @public\n */\n\nfunction escapeHtml(string) {\n var str = '' + string;\n var match = matchHtmlRegExp.exec(str);\n\n if (!match) {\n return str;\n }\n\n var escape;\n var html = '';\n var index = 0;\n var lastIndex = 0;\n\n for (index = match.index; index < str.length; index++) {\n switch (str.charCodeAt(index)) {\n case 34: // \"\n escape = '"';\n break;\n case 38: // &\n escape = '&';\n break;\n case 39: // '\n escape = ''';\n break;\n case 60: // <\n escape = '<';\n break;\n case 62: // >\n escape = '>';\n break;\n default:\n continue;\n }\n\n if (lastIndex !== index) {\n html += str.substring(lastIndex, index);\n }\n\n lastIndex = index + 1;\n html += escape;\n }\n\n return lastIndex !== index\n ? html + str.substring(lastIndex, index)\n : html;\n}\n", "Array.prototype.flat||Object.defineProperty(Array.prototype,\"flat\",{configurable:!0,value:function r(){var t=isNaN(arguments[0])?1:Number(arguments[0]);return t?Array.prototype.reduce.call(this,function(a,e){return Array.isArray(e)?a.push.apply(a,r.call(e,t-1)):a.push(e),a},[]):Array.prototype.slice.call(this)},writable:!0}),Array.prototype.flatMap||Object.defineProperty(Array.prototype,\"flatMap\",{configurable:!0,value:function(r){return Array.prototype.map.apply(this,arguments).flat()},writable:!0})\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport \"array-flat-polyfill\"\nimport \"focus-visible\"\nimport \"unfetch/polyfill\"\nimport \"url-polyfill\"\n\nimport {\n EMPTY,\n NEVER,\n Subject,\n defer,\n delay,\n filter,\n map,\n merge,\n mergeWith,\n shareReplay,\n switchMap\n} from \"rxjs\"\n\nimport { configuration, feature } from \"./_\"\nimport {\n at,\n getOptionalElement,\n requestJSON,\n setToggle,\n watchDocument,\n watchKeyboard,\n watchLocation,\n watchLocationTarget,\n watchMedia,\n watchPrint,\n watchViewport\n} from \"./browser\"\nimport {\n getComponentElement,\n getComponentElements,\n mountAnnounce,\n mountBackToTop,\n mountConsent,\n mountContent,\n mountDialog,\n mountHeader,\n mountHeaderTitle,\n mountPalette,\n mountSearch,\n mountSearchHiglight,\n mountSidebar,\n mountSource,\n mountTableOfContents,\n mountTabs,\n watchHeader,\n watchMain\n} from \"./components\"\nimport {\n SearchIndex,\n setupClipboardJS,\n setupInstantLoading,\n setupVersionSelector\n} from \"./integrations\"\nimport {\n patchIndeterminate,\n patchScrollfix,\n patchScrolllock\n} from \"./patches\"\nimport \"./polyfills\"\n\n/* ----------------------------------------------------------------------------\n * Application\n * ------------------------------------------------------------------------- */\n\n/* Yay, JavaScript is available */\ndocument.documentElement.classList.remove(\"no-js\")\ndocument.documentElement.classList.add(\"js\")\n\n/* Set up navigation observables and subjects */\nconst document$ = watchDocument()\nconst location$ = watchLocation()\nconst target$ = watchLocationTarget()\nconst keyboard$ = watchKeyboard()\n\n/* Set up media observables */\nconst viewport$ = watchViewport()\nconst tablet$ = watchMedia(\"(min-width: 960px)\")\nconst screen$ = watchMedia(\"(min-width: 1220px)\")\nconst print$ = watchPrint()\n\n/* Retrieve search index, if search is enabled */\nconst config = configuration()\nconst index$ = document.forms.namedItem(\"search\")\n ? __search?.index || requestJSON(\n new URL(\"search/search_index.json\", config.base)\n )\n : NEVER\n\n/* Set up Clipboard.js integration */\nconst alert$ = new Subject()\nsetupClipboardJS({ alert$ })\n\n/* Set up instant loading, if enabled */\nif (feature(\"navigation.instant\"))\n setupInstantLoading({ document$, location$, viewport$ })\n\n/* Set up version selector */\nif (config.version?.provider === \"mike\")\n setupVersionSelector({ document$ })\n\n/* Always close drawer and search on navigation */\nmerge(location$, target$)\n .pipe(\n delay(125)\n )\n .subscribe(() => {\n setToggle(\"drawer\", false)\n setToggle(\"search\", false)\n })\n\n/* Set up global keyboard handlers */\nkeyboard$\n .pipe(\n filter(({ mode }) => mode === \"global\")\n )\n .subscribe(key => {\n switch (key.type) {\n\n /* Go to previous page */\n case \"p\":\n case \",\":\n const prev = getOptionalElement(\"[href][rel=prev]\")\n if (typeof prev !== \"undefined\")\n prev.click()\n break\n\n /* Go to next page */\n case \"n\":\n case \".\":\n const next = getOptionalElement(\"[href][rel=next]\")\n if (typeof next !== \"undefined\")\n next.click()\n break\n }\n })\n\n/* Set up patches */\npatchIndeterminate({ document$, tablet$ })\npatchScrollfix({ document$ })\npatchScrolllock({ viewport$, tablet$ })\n\n/* Set up header and main area observable */\nconst header$ = watchHeader(getComponentElement(\"header\"), { viewport$ })\nconst main$ = document$\n .pipe(\n map(() => getComponentElement(\"main\")),\n switchMap(el => watchMain(el, { viewport$, header$ })),\n shareReplay(1)\n )\n\n/* Set up control component observables */\nconst control$ = merge(\n\n /* Consent */\n ...getComponentElements(\"consent\")\n .map(el => mountConsent(el, { target$ })),\n\n /* Dialog */\n ...getComponentElements(\"dialog\")\n .map(el => mountDialog(el, { alert$ })),\n\n /* Header */\n ...getComponentElements(\"header\")\n .map(el => mountHeader(el, { viewport$, header$, main$ })),\n\n /* Color palette */\n ...getComponentElements(\"palette\")\n .map(el => mountPalette(el)),\n\n /* Search */\n ...getComponentElements(\"search\")\n .map(el => mountSearch(el, { index$, keyboard$ })),\n\n /* Repository information */\n ...getComponentElements(\"source\")\n .map(el => mountSource(el))\n)\n\n/* Set up content component observables */\nconst content$ = defer(() => merge(\n\n /* Announcement bar */\n ...getComponentElements(\"announce\")\n .map(el => mountAnnounce(el)),\n\n /* Content */\n ...getComponentElements(\"content\")\n .map(el => mountContent(el, { viewport$, target$, print$ })),\n\n /* Search highlighting */\n ...getComponentElements(\"content\")\n .map(el => feature(\"search.highlight\")\n ? mountSearchHiglight(el, { index$, location$ })\n : EMPTY\n ),\n\n /* Header title */\n ...getComponentElements(\"header-title\")\n .map(el => mountHeaderTitle(el, { viewport$, header$ })),\n\n /* Sidebar */\n ...getComponentElements(\"sidebar\")\n .map(el => el.getAttribute(\"data-md-type\") === \"navigation\"\n ? at(screen$, () => mountSidebar(el, { viewport$, header$, main$ }))\n : at(tablet$, () => mountSidebar(el, { viewport$, header$, main$ }))\n ),\n\n /* Navigation tabs */\n ...getComponentElements(\"tabs\")\n .map(el => mountTabs(el, { viewport$, header$ })),\n\n /* Table of contents */\n ...getComponentElements(\"toc\")\n .map(el => mountTableOfContents(el, { viewport$, header$, target$ })),\n\n /* Back-to-top button */\n ...getComponentElements(\"top\")\n .map(el => mountBackToTop(el, { viewport$, header$, main$, target$ }))\n))\n\n/* Set up component observables */\nconst component$ = document$\n .pipe(\n switchMap(() => content$),\n mergeWith(control$),\n shareReplay(1)\n )\n\n/* Subscribe to all components */\ncomponent$.subscribe()\n\n/* ----------------------------------------------------------------------------\n * Exports\n * ------------------------------------------------------------------------- */\n\nwindow.document$ = document$ /* Document observable */\nwindow.location$ = location$ /* Location subject */\nwindow.target$ = target$ /* Location target observable */\nwindow.keyboard$ = keyboard$ /* Keyboard observable */\nwindow.viewport$ = viewport$ /* Viewport observable */\nwindow.tablet$ = tablet$ /* Media tablet observable */\nwindow.screen$ = screen$ /* Media screen observable */\nwindow.print$ = print$ /* Media print observable */\nwindow.alert$ = alert$ /* Alert subject */\nwindow.component$ = component$ /* Component observable */\n", "self.fetch||(self.fetch=function(e,n){return n=n||{},new Promise(function(t,s){var r=new XMLHttpRequest,o=[],u=[],i={},a=function(){return{ok:2==(r.status/100|0),statusText:r.statusText,status:r.status,url:r.responseURL,text:function(){return Promise.resolve(r.responseText)},json:function(){return Promise.resolve(r.responseText).then(JSON.parse)},blob:function(){return Promise.resolve(new Blob([r.response]))},clone:a,headers:{keys:function(){return o},entries:function(){return u},get:function(e){return i[e.toLowerCase()]},has:function(e){return e.toLowerCase()in i}}}};for(var c in r.open(n.method||\"get\",e,!0),r.onload=function(){r.getAllResponseHeaders().replace(/^(.*?):[^\\S\\n]*([\\s\\S]*?)$/gm,function(e,n,t){o.push(n=n.toLowerCase()),u.push([n,t]),i[n]=i[n]?i[n]+\",\"+t:t}),t(a())},r.onerror=s,r.withCredentials=\"include\"==n.credentials,n.headers)r.setRequestHeader(c,n.headers[c]);r.send(n.body||null)})});\n", "import tslib from '../tslib.js';\r\nconst {\r\n __extends,\r\n __assign,\r\n __rest,\r\n __decorate,\r\n __param,\r\n __metadata,\r\n __awaiter,\r\n __generator,\r\n __exportStar,\r\n __createBinding,\r\n __values,\r\n __read,\r\n __spread,\r\n __spreadArrays,\r\n __spreadArray,\r\n __await,\r\n __asyncGenerator,\r\n __asyncDelegator,\r\n __asyncValues,\r\n __makeTemplateObject,\r\n __importStar,\r\n __importDefault,\r\n __classPrivateFieldGet,\r\n __classPrivateFieldSet,\r\n} = tslib;\r\nexport {\r\n __extends,\r\n __assign,\r\n __rest,\r\n __decorate,\r\n __param,\r\n __metadata,\r\n __awaiter,\r\n __generator,\r\n __exportStar,\r\n __createBinding,\r\n __values,\r\n __read,\r\n __spread,\r\n __spreadArrays,\r\n __spreadArray,\r\n __await,\r\n __asyncGenerator,\r\n __asyncDelegator,\r\n __asyncValues,\r\n __makeTemplateObject,\r\n __importStar,\r\n __importDefault,\r\n __classPrivateFieldGet,\r\n __classPrivateFieldSet,\r\n};\r\n", null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n ReplaySubject,\n Subject,\n fromEvent\n} from \"rxjs\"\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Watch document\n *\n * Documents are implemented as subjects, so all downstream observables are\n * automatically updated when a new document is emitted.\n *\n * @returns Document subject\n */\nexport function watchDocument(): Subject {\n const document$ = new ReplaySubject(1)\n fromEvent(document, \"DOMContentLoaded\", { once: true })\n .subscribe(() => document$.next(document))\n\n /* Return document */\n return document$\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Retrieve all elements matching the query selector\n *\n * @template T - Element type\n *\n * @param selector - Query selector\n * @param node - Node of reference\n *\n * @returns Elements\n */\nexport function getElements(\n selector: T, node?: ParentNode\n): HTMLElementTagNameMap[T][]\n\nexport function getElements(\n selector: string, node?: ParentNode\n): T[]\n\nexport function getElements(\n selector: string, node: ParentNode = document\n): T[] {\n return Array.from(node.querySelectorAll(selector))\n}\n\n/**\n * Retrieve an element matching a query selector or throw a reference error\n *\n * Note that this function assumes that the element is present. If unsure if an\n * element is existent, use the `getOptionalElement` function instead.\n *\n * @template T - Element type\n *\n * @param selector - Query selector\n * @param node - Node of reference\n *\n * @returns Element\n */\nexport function getElement(\n selector: T, node?: ParentNode\n): HTMLElementTagNameMap[T]\n\nexport function getElement(\n selector: string, node?: ParentNode\n): T\n\nexport function getElement(\n selector: string, node: ParentNode = document\n): T {\n const el = getOptionalElement(selector, node)\n if (typeof el === \"undefined\")\n throw new ReferenceError(\n `Missing element: expected \"${selector}\" to be present`\n )\n\n /* Return element */\n return el\n}\n\n/* ------------------------------------------------------------------------- */\n\n/**\n * Retrieve an optional element matching the query selector\n *\n * @template T - Element type\n *\n * @param selector - Query selector\n * @param node - Node of reference\n *\n * @returns Element or nothing\n */\nexport function getOptionalElement(\n selector: T, node?: ParentNode\n): HTMLElementTagNameMap[T] | undefined\n\nexport function getOptionalElement(\n selector: string, node?: ParentNode\n): T | undefined\n\nexport function getOptionalElement(\n selector: string, node: ParentNode = document\n): T | undefined {\n return node.querySelector(selector) || undefined\n}\n\n/**\n * Retrieve the currently active element\n *\n * @returns Element or nothing\n */\nexport function getActiveElement(): HTMLElement | undefined {\n return document.activeElement instanceof HTMLElement\n ? document.activeElement || undefined\n : undefined\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n Observable,\n debounceTime,\n distinctUntilChanged,\n fromEvent,\n map,\n merge,\n startWith\n} from \"rxjs\"\n\nimport { getActiveElement } from \"../_\"\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Watch element focus\n *\n * Previously, this function used `focus` and `blur` events to determine whether\n * an element is focused, but this doesn't work if there are focusable elements\n * within the elements itself. A better solutions are `focusin` and `focusout`\n * events, which bubble up the tree and allow for more fine-grained control.\n *\n * `debounceTime` is necessary, because when a focus change happens inside an\n * element, the observable would first emit `false` and then `true` again.\n *\n * @param el - Element\n *\n * @returns Element focus observable\n */\nexport function watchElementFocus(\n el: HTMLElement\n): Observable {\n return merge(\n fromEvent(document.body, \"focusin\"),\n fromEvent(document.body, \"focusout\")\n )\n .pipe(\n debounceTime(1),\n map(() => {\n const active = getActiveElement()\n return typeof active !== \"undefined\"\n ? el.contains(active)\n : false\n }),\n startWith(el === getActiveElement()),\n distinctUntilChanged()\n )\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n Observable,\n animationFrameScheduler,\n auditTime,\n fromEvent,\n map,\n merge,\n startWith\n} from \"rxjs\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Element offset\n */\nexport interface ElementOffset {\n x: number /* Horizontal offset */\n y: number /* Vertical offset */\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Retrieve element offset\n *\n * @param el - Element\n *\n * @returns Element offset\n */\nexport function getElementOffset(\n el: HTMLElement\n): ElementOffset {\n return {\n x: el.offsetLeft,\n y: el.offsetTop\n }\n}\n\n/* ------------------------------------------------------------------------- */\n\n/**\n * Watch element offset\n *\n * @param el - Element\n *\n * @returns Element offset observable\n */\nexport function watchElementOffset(\n el: HTMLElement\n): Observable {\n return merge(\n fromEvent(window, \"load\"),\n fromEvent(window, \"resize\")\n )\n .pipe(\n auditTime(0, animationFrameScheduler),\n map(() => getElementOffset(el)),\n startWith(getElementOffset(el))\n )\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n Observable,\n animationFrameScheduler,\n auditTime,\n fromEvent,\n map,\n merge,\n startWith\n} from \"rxjs\"\n\nimport { ElementOffset } from \"../_\"\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Retrieve element content offset (= scroll offset)\n *\n * @param el - Element\n *\n * @returns Element content offset\n */\nexport function getElementContentOffset(\n el: HTMLElement\n): ElementOffset {\n return {\n x: el.scrollLeft,\n y: el.scrollTop\n }\n}\n\n/* ------------------------------------------------------------------------- */\n\n/**\n * Watch element content offset\n *\n * @param el - Element\n *\n * @returns Element content offset observable\n */\nexport function watchElementContentOffset(\n el: HTMLElement\n): Observable {\n return merge(\n fromEvent(el, \"scroll\"),\n fromEvent(window, \"resize\")\n )\n .pipe(\n auditTime(0, animationFrameScheduler),\n map(() => getElementContentOffset(el)),\n startWith(getElementContentOffset(el))\n )\n}\n", "/**\r\n * A collection of shims that provide minimal functionality of the ES6 collections.\r\n *\r\n * These implementations are not meant to be used outside of the ResizeObserver\r\n * modules as they cover only a limited range of use cases.\r\n */\r\n/* eslint-disable require-jsdoc, valid-jsdoc */\r\nvar MapShim = (function () {\r\n if (typeof Map !== 'undefined') {\r\n return Map;\r\n }\r\n /**\r\n * Returns index in provided array that matches the specified key.\r\n *\r\n * @param {Array} arr\r\n * @param {*} key\r\n * @returns {number}\r\n */\r\n function getIndex(arr, key) {\r\n var result = -1;\r\n arr.some(function (entry, index) {\r\n if (entry[0] === key) {\r\n result = index;\r\n return true;\r\n }\r\n return false;\r\n });\r\n return result;\r\n }\r\n return /** @class */ (function () {\r\n function class_1() {\r\n this.__entries__ = [];\r\n }\r\n Object.defineProperty(class_1.prototype, \"size\", {\r\n /**\r\n * @returns {boolean}\r\n */\r\n get: function () {\r\n return this.__entries__.length;\r\n },\r\n enumerable: true,\r\n configurable: true\r\n });\r\n /**\r\n * @param {*} key\r\n * @returns {*}\r\n */\r\n class_1.prototype.get = function (key) {\r\n var index = getIndex(this.__entries__, key);\r\n var entry = this.__entries__[index];\r\n return entry && entry[1];\r\n };\r\n /**\r\n * @param {*} key\r\n * @param {*} value\r\n * @returns {void}\r\n */\r\n class_1.prototype.set = function (key, value) {\r\n var index = getIndex(this.__entries__, key);\r\n if (~index) {\r\n this.__entries__[index][1] = value;\r\n }\r\n else {\r\n this.__entries__.push([key, value]);\r\n }\r\n };\r\n /**\r\n * @param {*} key\r\n * @returns {void}\r\n */\r\n class_1.prototype.delete = function (key) {\r\n var entries = this.__entries__;\r\n var index = getIndex(entries, key);\r\n if (~index) {\r\n entries.splice(index, 1);\r\n }\r\n };\r\n /**\r\n * @param {*} key\r\n * @returns {void}\r\n */\r\n class_1.prototype.has = function (key) {\r\n return !!~getIndex(this.__entries__, key);\r\n };\r\n /**\r\n * @returns {void}\r\n */\r\n class_1.prototype.clear = function () {\r\n this.__entries__.splice(0);\r\n };\r\n /**\r\n * @param {Function} callback\r\n * @param {*} [ctx=null]\r\n * @returns {void}\r\n */\r\n class_1.prototype.forEach = function (callback, ctx) {\r\n if (ctx === void 0) { ctx = null; }\r\n for (var _i = 0, _a = this.__entries__; _i < _a.length; _i++) {\r\n var entry = _a[_i];\r\n callback.call(ctx, entry[1], entry[0]);\r\n }\r\n };\r\n return class_1;\r\n }());\r\n})();\n\n/**\r\n * Detects whether window and document objects are available in current environment.\r\n */\r\nvar isBrowser = typeof window !== 'undefined' && typeof document !== 'undefined' && window.document === document;\n\n// Returns global object of a current environment.\r\nvar global$1 = (function () {\r\n if (typeof global !== 'undefined' && global.Math === Math) {\r\n return global;\r\n }\r\n if (typeof self !== 'undefined' && self.Math === Math) {\r\n return self;\r\n }\r\n if (typeof window !== 'undefined' && window.Math === Math) {\r\n return window;\r\n }\r\n // eslint-disable-next-line no-new-func\r\n return Function('return this')();\r\n})();\n\n/**\r\n * A shim for the requestAnimationFrame which falls back to the setTimeout if\r\n * first one is not supported.\r\n *\r\n * @returns {number} Requests' identifier.\r\n */\r\nvar requestAnimationFrame$1 = (function () {\r\n if (typeof requestAnimationFrame === 'function') {\r\n // It's required to use a bounded function because IE sometimes throws\r\n // an \"Invalid calling object\" error if rAF is invoked without the global\r\n // object on the left hand side.\r\n return requestAnimationFrame.bind(global$1);\r\n }\r\n return function (callback) { return setTimeout(function () { return callback(Date.now()); }, 1000 / 60); };\r\n})();\n\n// Defines minimum timeout before adding a trailing call.\r\nvar trailingTimeout = 2;\r\n/**\r\n * Creates a wrapper function which ensures that provided callback will be\r\n * invoked only once during the specified delay period.\r\n *\r\n * @param {Function} callback - Function to be invoked after the delay period.\r\n * @param {number} delay - Delay after which to invoke callback.\r\n * @returns {Function}\r\n */\r\nfunction throttle (callback, delay) {\r\n var leadingCall = false, trailingCall = false, lastCallTime = 0;\r\n /**\r\n * Invokes the original callback function and schedules new invocation if\r\n * the \"proxy\" was called during current request.\r\n *\r\n * @returns {void}\r\n */\r\n function resolvePending() {\r\n if (leadingCall) {\r\n leadingCall = false;\r\n callback();\r\n }\r\n if (trailingCall) {\r\n proxy();\r\n }\r\n }\r\n /**\r\n * Callback invoked after the specified delay. It will further postpone\r\n * invocation of the original function delegating it to the\r\n * requestAnimationFrame.\r\n *\r\n * @returns {void}\r\n */\r\n function timeoutCallback() {\r\n requestAnimationFrame$1(resolvePending);\r\n }\r\n /**\r\n * Schedules invocation of the original function.\r\n *\r\n * @returns {void}\r\n */\r\n function proxy() {\r\n var timeStamp = Date.now();\r\n if (leadingCall) {\r\n // Reject immediately following calls.\r\n if (timeStamp - lastCallTime < trailingTimeout) {\r\n return;\r\n }\r\n // Schedule new call to be in invoked when the pending one is resolved.\r\n // This is important for \"transitions\" which never actually start\r\n // immediately so there is a chance that we might miss one if change\r\n // happens amids the pending invocation.\r\n trailingCall = true;\r\n }\r\n else {\r\n leadingCall = true;\r\n trailingCall = false;\r\n setTimeout(timeoutCallback, delay);\r\n }\r\n lastCallTime = timeStamp;\r\n }\r\n return proxy;\r\n}\n\n// Minimum delay before invoking the update of observers.\r\nvar REFRESH_DELAY = 20;\r\n// A list of substrings of CSS properties used to find transition events that\r\n// might affect dimensions of observed elements.\r\nvar transitionKeys = ['top', 'right', 'bottom', 'left', 'width', 'height', 'size', 'weight'];\r\n// Check if MutationObserver is available.\r\nvar mutationObserverSupported = typeof MutationObserver !== 'undefined';\r\n/**\r\n * Singleton controller class which handles updates of ResizeObserver instances.\r\n */\r\nvar ResizeObserverController = /** @class */ (function () {\r\n /**\r\n * Creates a new instance of ResizeObserverController.\r\n *\r\n * @private\r\n */\r\n function ResizeObserverController() {\r\n /**\r\n * Indicates whether DOM listeners have been added.\r\n *\r\n * @private {boolean}\r\n */\r\n this.connected_ = false;\r\n /**\r\n * Tells that controller has subscribed for Mutation Events.\r\n *\r\n * @private {boolean}\r\n */\r\n this.mutationEventsAdded_ = false;\r\n /**\r\n * Keeps reference to the instance of MutationObserver.\r\n *\r\n * @private {MutationObserver}\r\n */\r\n this.mutationsObserver_ = null;\r\n /**\r\n * A list of connected observers.\r\n *\r\n * @private {Array}\r\n */\r\n this.observers_ = [];\r\n this.onTransitionEnd_ = this.onTransitionEnd_.bind(this);\r\n this.refresh = throttle(this.refresh.bind(this), REFRESH_DELAY);\r\n }\r\n /**\r\n * Adds observer to observers list.\r\n *\r\n * @param {ResizeObserverSPI} observer - Observer to be added.\r\n * @returns {void}\r\n */\r\n ResizeObserverController.prototype.addObserver = function (observer) {\r\n if (!~this.observers_.indexOf(observer)) {\r\n this.observers_.push(observer);\r\n }\r\n // Add listeners if they haven't been added yet.\r\n if (!this.connected_) {\r\n this.connect_();\r\n }\r\n };\r\n /**\r\n * Removes observer from observers list.\r\n *\r\n * @param {ResizeObserverSPI} observer - Observer to be removed.\r\n * @returns {void}\r\n */\r\n ResizeObserverController.prototype.removeObserver = function (observer) {\r\n var observers = this.observers_;\r\n var index = observers.indexOf(observer);\r\n // Remove observer if it's present in registry.\r\n if (~index) {\r\n observers.splice(index, 1);\r\n }\r\n // Remove listeners if controller has no connected observers.\r\n if (!observers.length && this.connected_) {\r\n this.disconnect_();\r\n }\r\n };\r\n /**\r\n * Invokes the update of observers. It will continue running updates insofar\r\n * it detects changes.\r\n *\r\n * @returns {void}\r\n */\r\n ResizeObserverController.prototype.refresh = function () {\r\n var changesDetected = this.updateObservers_();\r\n // Continue running updates if changes have been detected as there might\r\n // be future ones caused by CSS transitions.\r\n if (changesDetected) {\r\n this.refresh();\r\n }\r\n };\r\n /**\r\n * Updates every observer from observers list and notifies them of queued\r\n * entries.\r\n *\r\n * @private\r\n * @returns {boolean} Returns \"true\" if any observer has detected changes in\r\n * dimensions of it's elements.\r\n */\r\n ResizeObserverController.prototype.updateObservers_ = function () {\r\n // Collect observers that have active observations.\r\n var activeObservers = this.observers_.filter(function (observer) {\r\n return observer.gatherActive(), observer.hasActive();\r\n });\r\n // Deliver notifications in a separate cycle in order to avoid any\r\n // collisions between observers, e.g. when multiple instances of\r\n // ResizeObserver are tracking the same element and the callback of one\r\n // of them changes content dimensions of the observed target. Sometimes\r\n // this may result in notifications being blocked for the rest of observers.\r\n activeObservers.forEach(function (observer) { return observer.broadcastActive(); });\r\n return activeObservers.length > 0;\r\n };\r\n /**\r\n * Initializes DOM listeners.\r\n *\r\n * @private\r\n * @returns {void}\r\n */\r\n ResizeObserverController.prototype.connect_ = function () {\r\n // Do nothing if running in a non-browser environment or if listeners\r\n // have been already added.\r\n if (!isBrowser || this.connected_) {\r\n return;\r\n }\r\n // Subscription to the \"Transitionend\" event is used as a workaround for\r\n // delayed transitions. This way it's possible to capture at least the\r\n // final state of an element.\r\n document.addEventListener('transitionend', this.onTransitionEnd_);\r\n window.addEventListener('resize', this.refresh);\r\n if (mutationObserverSupported) {\r\n this.mutationsObserver_ = new MutationObserver(this.refresh);\r\n this.mutationsObserver_.observe(document, {\r\n attributes: true,\r\n childList: true,\r\n characterData: true,\r\n subtree: true\r\n });\r\n }\r\n else {\r\n document.addEventListener('DOMSubtreeModified', this.refresh);\r\n this.mutationEventsAdded_ = true;\r\n }\r\n this.connected_ = true;\r\n };\r\n /**\r\n * Removes DOM listeners.\r\n *\r\n * @private\r\n * @returns {void}\r\n */\r\n ResizeObserverController.prototype.disconnect_ = function () {\r\n // Do nothing if running in a non-browser environment or if listeners\r\n // have been already removed.\r\n if (!isBrowser || !this.connected_) {\r\n return;\r\n }\r\n document.removeEventListener('transitionend', this.onTransitionEnd_);\r\n window.removeEventListener('resize', this.refresh);\r\n if (this.mutationsObserver_) {\r\n this.mutationsObserver_.disconnect();\r\n }\r\n if (this.mutationEventsAdded_) {\r\n document.removeEventListener('DOMSubtreeModified', this.refresh);\r\n }\r\n this.mutationsObserver_ = null;\r\n this.mutationEventsAdded_ = false;\r\n this.connected_ = false;\r\n };\r\n /**\r\n * \"Transitionend\" event handler.\r\n *\r\n * @private\r\n * @param {TransitionEvent} event\r\n * @returns {void}\r\n */\r\n ResizeObserverController.prototype.onTransitionEnd_ = function (_a) {\r\n var _b = _a.propertyName, propertyName = _b === void 0 ? '' : _b;\r\n // Detect whether transition may affect dimensions of an element.\r\n var isReflowProperty = transitionKeys.some(function (key) {\r\n return !!~propertyName.indexOf(key);\r\n });\r\n if (isReflowProperty) {\r\n this.refresh();\r\n }\r\n };\r\n /**\r\n * Returns instance of the ResizeObserverController.\r\n *\r\n * @returns {ResizeObserverController}\r\n */\r\n ResizeObserverController.getInstance = function () {\r\n if (!this.instance_) {\r\n this.instance_ = new ResizeObserverController();\r\n }\r\n return this.instance_;\r\n };\r\n /**\r\n * Holds reference to the controller's instance.\r\n *\r\n * @private {ResizeObserverController}\r\n */\r\n ResizeObserverController.instance_ = null;\r\n return ResizeObserverController;\r\n}());\n\n/**\r\n * Defines non-writable/enumerable properties of the provided target object.\r\n *\r\n * @param {Object} target - Object for which to define properties.\r\n * @param {Object} props - Properties to be defined.\r\n * @returns {Object} Target object.\r\n */\r\nvar defineConfigurable = (function (target, props) {\r\n for (var _i = 0, _a = Object.keys(props); _i < _a.length; _i++) {\r\n var key = _a[_i];\r\n Object.defineProperty(target, key, {\r\n value: props[key],\r\n enumerable: false,\r\n writable: false,\r\n configurable: true\r\n });\r\n }\r\n return target;\r\n});\n\n/**\r\n * Returns the global object associated with provided element.\r\n *\r\n * @param {Object} target\r\n * @returns {Object}\r\n */\r\nvar getWindowOf = (function (target) {\r\n // Assume that the element is an instance of Node, which means that it\r\n // has the \"ownerDocument\" property from which we can retrieve a\r\n // corresponding global object.\r\n var ownerGlobal = target && target.ownerDocument && target.ownerDocument.defaultView;\r\n // Return the local global object if it's not possible extract one from\r\n // provided element.\r\n return ownerGlobal || global$1;\r\n});\n\n// Placeholder of an empty content rectangle.\r\nvar emptyRect = createRectInit(0, 0, 0, 0);\r\n/**\r\n * Converts provided string to a number.\r\n *\r\n * @param {number|string} value\r\n * @returns {number}\r\n */\r\nfunction toFloat(value) {\r\n return parseFloat(value) || 0;\r\n}\r\n/**\r\n * Extracts borders size from provided styles.\r\n *\r\n * @param {CSSStyleDeclaration} styles\r\n * @param {...string} positions - Borders positions (top, right, ...)\r\n * @returns {number}\r\n */\r\nfunction getBordersSize(styles) {\r\n var positions = [];\r\n for (var _i = 1; _i < arguments.length; _i++) {\r\n positions[_i - 1] = arguments[_i];\r\n }\r\n return positions.reduce(function (size, position) {\r\n var value = styles['border-' + position + '-width'];\r\n return size + toFloat(value);\r\n }, 0);\r\n}\r\n/**\r\n * Extracts paddings sizes from provided styles.\r\n *\r\n * @param {CSSStyleDeclaration} styles\r\n * @returns {Object} Paddings box.\r\n */\r\nfunction getPaddings(styles) {\r\n var positions = ['top', 'right', 'bottom', 'left'];\r\n var paddings = {};\r\n for (var _i = 0, positions_1 = positions; _i < positions_1.length; _i++) {\r\n var position = positions_1[_i];\r\n var value = styles['padding-' + position];\r\n paddings[position] = toFloat(value);\r\n }\r\n return paddings;\r\n}\r\n/**\r\n * Calculates content rectangle of provided SVG element.\r\n *\r\n * @param {SVGGraphicsElement} target - Element content rectangle of which needs\r\n * to be calculated.\r\n * @returns {DOMRectInit}\r\n */\r\nfunction getSVGContentRect(target) {\r\n var bbox = target.getBBox();\r\n return createRectInit(0, 0, bbox.width, bbox.height);\r\n}\r\n/**\r\n * Calculates content rectangle of provided HTMLElement.\r\n *\r\n * @param {HTMLElement} target - Element for which to calculate the content rectangle.\r\n * @returns {DOMRectInit}\r\n */\r\nfunction getHTMLElementContentRect(target) {\r\n // Client width & height properties can't be\r\n // used exclusively as they provide rounded values.\r\n var clientWidth = target.clientWidth, clientHeight = target.clientHeight;\r\n // By this condition we can catch all non-replaced inline, hidden and\r\n // detached elements. Though elements with width & height properties less\r\n // than 0.5 will be discarded as well.\r\n //\r\n // Without it we would need to implement separate methods for each of\r\n // those cases and it's not possible to perform a precise and performance\r\n // effective test for hidden elements. E.g. even jQuery's ':visible' filter\r\n // gives wrong results for elements with width & height less than 0.5.\r\n if (!clientWidth && !clientHeight) {\r\n return emptyRect;\r\n }\r\n var styles = getWindowOf(target).getComputedStyle(target);\r\n var paddings = getPaddings(styles);\r\n var horizPad = paddings.left + paddings.right;\r\n var vertPad = paddings.top + paddings.bottom;\r\n // Computed styles of width & height are being used because they are the\r\n // only dimensions available to JS that contain non-rounded values. It could\r\n // be possible to utilize the getBoundingClientRect if only it's data wasn't\r\n // affected by CSS transformations let alone paddings, borders and scroll bars.\r\n var width = toFloat(styles.width), height = toFloat(styles.height);\r\n // Width & height include paddings and borders when the 'border-box' box\r\n // model is applied (except for IE).\r\n if (styles.boxSizing === 'border-box') {\r\n // Following conditions are required to handle Internet Explorer which\r\n // doesn't include paddings and borders to computed CSS dimensions.\r\n //\r\n // We can say that if CSS dimensions + paddings are equal to the \"client\"\r\n // properties then it's either IE, and thus we don't need to subtract\r\n // anything, or an element merely doesn't have paddings/borders styles.\r\n if (Math.round(width + horizPad) !== clientWidth) {\r\n width -= getBordersSize(styles, 'left', 'right') + horizPad;\r\n }\r\n if (Math.round(height + vertPad) !== clientHeight) {\r\n height -= getBordersSize(styles, 'top', 'bottom') + vertPad;\r\n }\r\n }\r\n // Following steps can't be applied to the document's root element as its\r\n // client[Width/Height] properties represent viewport area of the window.\r\n // Besides, it's as well not necessary as the itself neither has\r\n // rendered scroll bars nor it can be clipped.\r\n if (!isDocumentElement(target)) {\r\n // In some browsers (only in Firefox, actually) CSS width & height\r\n // include scroll bars size which can be removed at this step as scroll\r\n // bars are the only difference between rounded dimensions + paddings\r\n // and \"client\" properties, though that is not always true in Chrome.\r\n var vertScrollbar = Math.round(width + horizPad) - clientWidth;\r\n var horizScrollbar = Math.round(height + vertPad) - clientHeight;\r\n // Chrome has a rather weird rounding of \"client\" properties.\r\n // E.g. for an element with content width of 314.2px it sometimes gives\r\n // the client width of 315px and for the width of 314.7px it may give\r\n // 314px. And it doesn't happen all the time. So just ignore this delta\r\n // as a non-relevant.\r\n if (Math.abs(vertScrollbar) !== 1) {\r\n width -= vertScrollbar;\r\n }\r\n if (Math.abs(horizScrollbar) !== 1) {\r\n height -= horizScrollbar;\r\n }\r\n }\r\n return createRectInit(paddings.left, paddings.top, width, height);\r\n}\r\n/**\r\n * Checks whether provided element is an instance of the SVGGraphicsElement.\r\n *\r\n * @param {Element} target - Element to be checked.\r\n * @returns {boolean}\r\n */\r\nvar isSVGGraphicsElement = (function () {\r\n // Some browsers, namely IE and Edge, don't have the SVGGraphicsElement\r\n // interface.\r\n if (typeof SVGGraphicsElement !== 'undefined') {\r\n return function (target) { return target instanceof getWindowOf(target).SVGGraphicsElement; };\r\n }\r\n // If it's so, then check that element is at least an instance of the\r\n // SVGElement and that it has the \"getBBox\" method.\r\n // eslint-disable-next-line no-extra-parens\r\n return function (target) { return (target instanceof getWindowOf(target).SVGElement &&\r\n typeof target.getBBox === 'function'); };\r\n})();\r\n/**\r\n * Checks whether provided element is a document element ().\r\n *\r\n * @param {Element} target - Element to be checked.\r\n * @returns {boolean}\r\n */\r\nfunction isDocumentElement(target) {\r\n return target === getWindowOf(target).document.documentElement;\r\n}\r\n/**\r\n * Calculates an appropriate content rectangle for provided html or svg element.\r\n *\r\n * @param {Element} target - Element content rectangle of which needs to be calculated.\r\n * @returns {DOMRectInit}\r\n */\r\nfunction getContentRect(target) {\r\n if (!isBrowser) {\r\n return emptyRect;\r\n }\r\n if (isSVGGraphicsElement(target)) {\r\n return getSVGContentRect(target);\r\n }\r\n return getHTMLElementContentRect(target);\r\n}\r\n/**\r\n * Creates rectangle with an interface of the DOMRectReadOnly.\r\n * Spec: https://drafts.fxtf.org/geometry/#domrectreadonly\r\n *\r\n * @param {DOMRectInit} rectInit - Object with rectangle's x/y coordinates and dimensions.\r\n * @returns {DOMRectReadOnly}\r\n */\r\nfunction createReadOnlyRect(_a) {\r\n var x = _a.x, y = _a.y, width = _a.width, height = _a.height;\r\n // If DOMRectReadOnly is available use it as a prototype for the rectangle.\r\n var Constr = typeof DOMRectReadOnly !== 'undefined' ? DOMRectReadOnly : Object;\r\n var rect = Object.create(Constr.prototype);\r\n // Rectangle's properties are not writable and non-enumerable.\r\n defineConfigurable(rect, {\r\n x: x, y: y, width: width, height: height,\r\n top: y,\r\n right: x + width,\r\n bottom: height + y,\r\n left: x\r\n });\r\n return rect;\r\n}\r\n/**\r\n * Creates DOMRectInit object based on the provided dimensions and the x/y coordinates.\r\n * Spec: https://drafts.fxtf.org/geometry/#dictdef-domrectinit\r\n *\r\n * @param {number} x - X coordinate.\r\n * @param {number} y - Y coordinate.\r\n * @param {number} width - Rectangle's width.\r\n * @param {number} height - Rectangle's height.\r\n * @returns {DOMRectInit}\r\n */\r\nfunction createRectInit(x, y, width, height) {\r\n return { x: x, y: y, width: width, height: height };\r\n}\n\n/**\r\n * Class that is responsible for computations of the content rectangle of\r\n * provided DOM element and for keeping track of it's changes.\r\n */\r\nvar ResizeObservation = /** @class */ (function () {\r\n /**\r\n * Creates an instance of ResizeObservation.\r\n *\r\n * @param {Element} target - Element to be observed.\r\n */\r\n function ResizeObservation(target) {\r\n /**\r\n * Broadcasted width of content rectangle.\r\n *\r\n * @type {number}\r\n */\r\n this.broadcastWidth = 0;\r\n /**\r\n * Broadcasted height of content rectangle.\r\n *\r\n * @type {number}\r\n */\r\n this.broadcastHeight = 0;\r\n /**\r\n * Reference to the last observed content rectangle.\r\n *\r\n * @private {DOMRectInit}\r\n */\r\n this.contentRect_ = createRectInit(0, 0, 0, 0);\r\n this.target = target;\r\n }\r\n /**\r\n * Updates content rectangle and tells whether it's width or height properties\r\n * have changed since the last broadcast.\r\n *\r\n * @returns {boolean}\r\n */\r\n ResizeObservation.prototype.isActive = function () {\r\n var rect = getContentRect(this.target);\r\n this.contentRect_ = rect;\r\n return (rect.width !== this.broadcastWidth ||\r\n rect.height !== this.broadcastHeight);\r\n };\r\n /**\r\n * Updates 'broadcastWidth' and 'broadcastHeight' properties with a data\r\n * from the corresponding properties of the last observed content rectangle.\r\n *\r\n * @returns {DOMRectInit} Last observed content rectangle.\r\n */\r\n ResizeObservation.prototype.broadcastRect = function () {\r\n var rect = this.contentRect_;\r\n this.broadcastWidth = rect.width;\r\n this.broadcastHeight = rect.height;\r\n return rect;\r\n };\r\n return ResizeObservation;\r\n}());\n\nvar ResizeObserverEntry = /** @class */ (function () {\r\n /**\r\n * Creates an instance of ResizeObserverEntry.\r\n *\r\n * @param {Element} target - Element that is being observed.\r\n * @param {DOMRectInit} rectInit - Data of the element's content rectangle.\r\n */\r\n function ResizeObserverEntry(target, rectInit) {\r\n var contentRect = createReadOnlyRect(rectInit);\r\n // According to the specification following properties are not writable\r\n // and are also not enumerable in the native implementation.\r\n //\r\n // Property accessors are not being used as they'd require to define a\r\n // private WeakMap storage which may cause memory leaks in browsers that\r\n // don't support this type of collections.\r\n defineConfigurable(this, { target: target, contentRect: contentRect });\r\n }\r\n return ResizeObserverEntry;\r\n}());\n\nvar ResizeObserverSPI = /** @class */ (function () {\r\n /**\r\n * Creates a new instance of ResizeObserver.\r\n *\r\n * @param {ResizeObserverCallback} callback - Callback function that is invoked\r\n * when one of the observed elements changes it's content dimensions.\r\n * @param {ResizeObserverController} controller - Controller instance which\r\n * is responsible for the updates of observer.\r\n * @param {ResizeObserver} callbackCtx - Reference to the public\r\n * ResizeObserver instance which will be passed to callback function.\r\n */\r\n function ResizeObserverSPI(callback, controller, callbackCtx) {\r\n /**\r\n * Collection of resize observations that have detected changes in dimensions\r\n * of elements.\r\n *\r\n * @private {Array}\r\n */\r\n this.activeObservations_ = [];\r\n /**\r\n * Registry of the ResizeObservation instances.\r\n *\r\n * @private {Map}\r\n */\r\n this.observations_ = new MapShim();\r\n if (typeof callback !== 'function') {\r\n throw new TypeError('The callback provided as parameter 1 is not a function.');\r\n }\r\n this.callback_ = callback;\r\n this.controller_ = controller;\r\n this.callbackCtx_ = callbackCtx;\r\n }\r\n /**\r\n * Starts observing provided element.\r\n *\r\n * @param {Element} target - Element to be observed.\r\n * @returns {void}\r\n */\r\n ResizeObserverSPI.prototype.observe = function (target) {\r\n if (!arguments.length) {\r\n throw new TypeError('1 argument required, but only 0 present.');\r\n }\r\n // Do nothing if current environment doesn't have the Element interface.\r\n if (typeof Element === 'undefined' || !(Element instanceof Object)) {\r\n return;\r\n }\r\n if (!(target instanceof getWindowOf(target).Element)) {\r\n throw new TypeError('parameter 1 is not of type \"Element\".');\r\n }\r\n var observations = this.observations_;\r\n // Do nothing if element is already being observed.\r\n if (observations.has(target)) {\r\n return;\r\n }\r\n observations.set(target, new ResizeObservation(target));\r\n this.controller_.addObserver(this);\r\n // Force the update of observations.\r\n this.controller_.refresh();\r\n };\r\n /**\r\n * Stops observing provided element.\r\n *\r\n * @param {Element} target - Element to stop observing.\r\n * @returns {void}\r\n */\r\n ResizeObserverSPI.prototype.unobserve = function (target) {\r\n if (!arguments.length) {\r\n throw new TypeError('1 argument required, but only 0 present.');\r\n }\r\n // Do nothing if current environment doesn't have the Element interface.\r\n if (typeof Element === 'undefined' || !(Element instanceof Object)) {\r\n return;\r\n }\r\n if (!(target instanceof getWindowOf(target).Element)) {\r\n throw new TypeError('parameter 1 is not of type \"Element\".');\r\n }\r\n var observations = this.observations_;\r\n // Do nothing if element is not being observed.\r\n if (!observations.has(target)) {\r\n return;\r\n }\r\n observations.delete(target);\r\n if (!observations.size) {\r\n this.controller_.removeObserver(this);\r\n }\r\n };\r\n /**\r\n * Stops observing all elements.\r\n *\r\n * @returns {void}\r\n */\r\n ResizeObserverSPI.prototype.disconnect = function () {\r\n this.clearActive();\r\n this.observations_.clear();\r\n this.controller_.removeObserver(this);\r\n };\r\n /**\r\n * Collects observation instances the associated element of which has changed\r\n * it's content rectangle.\r\n *\r\n * @returns {void}\r\n */\r\n ResizeObserverSPI.prototype.gatherActive = function () {\r\n var _this = this;\r\n this.clearActive();\r\n this.observations_.forEach(function (observation) {\r\n if (observation.isActive()) {\r\n _this.activeObservations_.push(observation);\r\n }\r\n });\r\n };\r\n /**\r\n * Invokes initial callback function with a list of ResizeObserverEntry\r\n * instances collected from active resize observations.\r\n *\r\n * @returns {void}\r\n */\r\n ResizeObserverSPI.prototype.broadcastActive = function () {\r\n // Do nothing if observer doesn't have active observations.\r\n if (!this.hasActive()) {\r\n return;\r\n }\r\n var ctx = this.callbackCtx_;\r\n // Create ResizeObserverEntry instance for every active observation.\r\n var entries = this.activeObservations_.map(function (observation) {\r\n return new ResizeObserverEntry(observation.target, observation.broadcastRect());\r\n });\r\n this.callback_.call(ctx, entries, ctx);\r\n this.clearActive();\r\n };\r\n /**\r\n * Clears the collection of active observations.\r\n *\r\n * @returns {void}\r\n */\r\n ResizeObserverSPI.prototype.clearActive = function () {\r\n this.activeObservations_.splice(0);\r\n };\r\n /**\r\n * Tells whether observer has active observations.\r\n *\r\n * @returns {boolean}\r\n */\r\n ResizeObserverSPI.prototype.hasActive = function () {\r\n return this.activeObservations_.length > 0;\r\n };\r\n return ResizeObserverSPI;\r\n}());\n\n// Registry of internal observers. If WeakMap is not available use current shim\r\n// for the Map collection as it has all required methods and because WeakMap\r\n// can't be fully polyfilled anyway.\r\nvar observers = typeof WeakMap !== 'undefined' ? new WeakMap() : new MapShim();\r\n/**\r\n * ResizeObserver API. Encapsulates the ResizeObserver SPI implementation\r\n * exposing only those methods and properties that are defined in the spec.\r\n */\r\nvar ResizeObserver = /** @class */ (function () {\r\n /**\r\n * Creates a new instance of ResizeObserver.\r\n *\r\n * @param {ResizeObserverCallback} callback - Callback that is invoked when\r\n * dimensions of the observed elements change.\r\n */\r\n function ResizeObserver(callback) {\r\n if (!(this instanceof ResizeObserver)) {\r\n throw new TypeError('Cannot call a class as a function.');\r\n }\r\n if (!arguments.length) {\r\n throw new TypeError('1 argument required, but only 0 present.');\r\n }\r\n var controller = ResizeObserverController.getInstance();\r\n var observer = new ResizeObserverSPI(callback, controller, this);\r\n observers.set(this, observer);\r\n }\r\n return ResizeObserver;\r\n}());\r\n// Expose public methods of ResizeObserver.\r\n[\r\n 'observe',\r\n 'unobserve',\r\n 'disconnect'\r\n].forEach(function (method) {\r\n ResizeObserver.prototype[method] = function () {\r\n var _a;\r\n return (_a = observers.get(this))[method].apply(_a, arguments);\r\n };\r\n});\n\nvar index = (function () {\r\n // Export existing implementation if available.\r\n if (typeof global$1.ResizeObserver !== 'undefined') {\r\n return global$1.ResizeObserver;\r\n }\r\n return ResizeObserver;\r\n})();\n\nexport default index;\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport ResizeObserver from \"resize-observer-polyfill\"\nimport {\n NEVER,\n Observable,\n Subject,\n defer,\n filter,\n finalize,\n map,\n merge,\n of,\n shareReplay,\n startWith,\n switchMap,\n tap\n} from \"rxjs\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Element offset\n */\nexport interface ElementSize {\n width: number /* Element width */\n height: number /* Element height */\n}\n\n/* ----------------------------------------------------------------------------\n * Data\n * ------------------------------------------------------------------------- */\n\n/**\n * Resize observer entry subject\n */\nconst entry$ = new Subject()\n\n/**\n * Resize observer observable\n *\n * This observable will create a `ResizeObserver` on the first subscription\n * and will automatically terminate it when there are no more subscribers.\n * It's quite important to centralize observation in a single `ResizeObserver`,\n * as the performance difference can be quite dramatic, as the link shows.\n *\n * @see https://bit.ly/3iIYfEm - Google Groups on performance\n */\nconst observer$ = defer(() => of(\n new ResizeObserver(entries => {\n for (const entry of entries)\n entry$.next(entry)\n })\n))\n .pipe(\n switchMap(observer => merge(NEVER, of(observer))\n .pipe(\n finalize(() => observer.disconnect())\n )\n ),\n shareReplay(1)\n )\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Retrieve element size\n *\n * @param el - Element\n *\n * @returns Element size\n */\nexport function getElementSize(\n el: HTMLElement\n): ElementSize {\n return {\n width: el.offsetWidth,\n height: el.offsetHeight\n }\n}\n\n/* ------------------------------------------------------------------------- */\n\n/**\n * Watch element size\n *\n * This function returns an observable that subscribes to a single internal\n * instance of `ResizeObserver` upon subscription, and emit resize events until\n * termination. Note that this function should not be called with the same\n * element twice, as the first unsubscription will terminate observation.\n *\n * Sadly, we can't use the `DOMRect` objects returned by the observer, because\n * we need the emitted values to be consistent with `getElementSize`, which will\n * return the used values (rounded) and not actual values (unrounded). Thus, we\n * use the `offset*` properties. See the linked GitHub issue.\n *\n * @see https://bit.ly/3m0k3he - GitHub issue\n *\n * @param el - Element\n *\n * @returns Element size observable\n */\nexport function watchElementSize(\n el: HTMLElement\n): Observable {\n return observer$\n .pipe(\n tap(observer => observer.observe(el)),\n switchMap(observer => entry$\n .pipe(\n filter(({ target }) => target === el),\n finalize(() => observer.unobserve(el)),\n map(() => getElementSize(el))\n )\n ),\n startWith(getElementSize(el))\n )\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport { ElementSize } from \"../_\"\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Retrieve element content size (= scroll width and height)\n *\n * @param el - Element\n *\n * @returns Element content size\n */\nexport function getElementContentSize(\n el: HTMLElement\n): ElementSize {\n return {\n width: el.scrollWidth,\n height: el.scrollHeight\n }\n}\n\n/**\n * Retrieve the overflowing container of an element, if any\n *\n * @param el - Element\n *\n * @returns Overflowing container or nothing\n */\nexport function getElementContainer(\n el: HTMLElement\n): HTMLElement | undefined {\n let parent = el.parentElement\n while (parent)\n if (\n el.scrollWidth <= parent.scrollWidth &&\n el.scrollHeight <= parent.scrollHeight\n )\n parent = (el = parent).parentElement\n else\n break\n\n /* Return overflowing container */\n return parent ? el : undefined\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n NEVER,\n Observable,\n Subject,\n defer,\n distinctUntilChanged,\n filter,\n finalize,\n map,\n merge,\n of,\n shareReplay,\n switchMap,\n tap\n} from \"rxjs\"\n\nimport {\n getElementContentSize,\n getElementSize,\n watchElementContentOffset\n} from \"~/browser\"\n\n/* ----------------------------------------------------------------------------\n * Data\n * ------------------------------------------------------------------------- */\n\n/**\n * Intersection observer entry subject\n */\nconst entry$ = new Subject()\n\n/**\n * Intersection observer observable\n *\n * This observable will create an `IntersectionObserver` on first subscription\n * and will automatically terminate it when there are no more subscribers.\n *\n * @see https://bit.ly/3iIYfEm - Google Groups on performance\n */\nconst observer$ = defer(() => of(\n new IntersectionObserver(entries => {\n for (const entry of entries)\n entry$.next(entry)\n }, {\n threshold: 0\n })\n))\n .pipe(\n switchMap(observer => merge(NEVER, of(observer))\n .pipe(\n finalize(() => observer.disconnect())\n )\n ),\n shareReplay(1)\n )\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Watch element visibility\n *\n * @param el - Element\n *\n * @returns Element visibility observable\n */\nexport function watchElementVisibility(\n el: HTMLElement\n): Observable {\n return observer$\n .pipe(\n tap(observer => observer.observe(el)),\n switchMap(observer => entry$\n .pipe(\n filter(({ target }) => target === el),\n finalize(() => observer.unobserve(el)),\n map(({ isIntersecting }) => isIntersecting)\n )\n )\n )\n}\n\n/**\n * Watch element boundary\n *\n * This function returns an observable which emits whether the bottom content\n * boundary (= scroll offset) of an element is within a certain threshold.\n *\n * @param el - Element\n * @param threshold - Threshold\n *\n * @returns Element boundary observable\n */\nexport function watchElementBoundary(\n el: HTMLElement, threshold = 16\n): Observable {\n return watchElementContentOffset(el)\n .pipe(\n map(({ y }) => {\n const visible = getElementSize(el)\n const content = getElementContentSize(el)\n return y >= (\n content.height - visible.height - threshold\n )\n }),\n distinctUntilChanged()\n )\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n Observable,\n fromEvent,\n map,\n startWith\n} from \"rxjs\"\n\nimport { getElement } from \"../element\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Toggle\n */\nexport type Toggle =\n | \"drawer\" /* Toggle for drawer */\n | \"search\" /* Toggle for search */\n\n/* ----------------------------------------------------------------------------\n * Data\n * ------------------------------------------------------------------------- */\n\n/**\n * Toggle map\n */\nconst toggles: Record = {\n drawer: getElement(\"[data-md-toggle=drawer]\"),\n search: getElement(\"[data-md-toggle=search]\")\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Retrieve the value of a toggle\n *\n * @param name - Toggle\n *\n * @returns Toggle value\n */\nexport function getToggle(name: Toggle): boolean {\n return toggles[name].checked\n}\n\n/**\n * Set toggle\n *\n * Simulating a click event seems to be the most cross-browser compatible way\n * of changing the value while also emitting a `change` event. Before, Material\n * used `CustomEvent` to programmatically change the value of a toggle, but this\n * is a much simpler and cleaner solution which doesn't require a polyfill.\n *\n * @param name - Toggle\n * @param value - Toggle value\n */\nexport function setToggle(name: Toggle, value: boolean): void {\n if (toggles[name].checked !== value)\n toggles[name].click()\n}\n\n/* ------------------------------------------------------------------------- */\n\n/**\n * Watch toggle\n *\n * @param name - Toggle\n *\n * @returns Toggle value observable\n */\nexport function watchToggle(name: Toggle): Observable {\n const el = toggles[name]\n return fromEvent(el, \"change\")\n .pipe(\n map(() => el.checked),\n startWith(el.checked)\n )\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n Observable,\n filter,\n fromEvent,\n map,\n share\n} from \"rxjs\"\n\nimport { getActiveElement } from \"../element\"\nimport { getToggle } from \"../toggle\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Keyboard mode\n */\nexport type KeyboardMode =\n | \"global\" /* Global */\n | \"search\" /* Search is open */\n\n/* ------------------------------------------------------------------------- */\n\n/**\n * Keyboard\n */\nexport interface Keyboard {\n mode: KeyboardMode /* Keyboard mode */\n type: string /* Key type */\n claim(): void /* Key claim */\n}\n\n/* ----------------------------------------------------------------------------\n * Helper functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Check whether an element may receive keyboard input\n *\n * @param el - Element\n * @param type - Key type\n *\n * @returns Test result\n */\nfunction isSusceptibleToKeyboard(\n el: HTMLElement, type: string\n): boolean {\n switch (el.constructor) {\n\n /* Input elements */\n case HTMLInputElement:\n /* @ts-expect-error - omit unnecessary type cast */\n if (el.type === \"radio\")\n return /^Arrow/.test(type)\n else\n return true\n\n /* Select element and textarea */\n case HTMLSelectElement:\n case HTMLTextAreaElement:\n return true\n\n /* Everything else */\n default:\n return el.isContentEditable\n }\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Watch keyboard\n *\n * @returns Keyboard observable\n */\nexport function watchKeyboard(): Observable {\n return fromEvent(window, \"keydown\")\n .pipe(\n filter(ev => !(ev.metaKey || ev.ctrlKey)),\n map(ev => ({\n mode: getToggle(\"search\") ? \"search\" : \"global\",\n type: ev.key,\n claim() {\n ev.preventDefault()\n ev.stopPropagation()\n }\n } as Keyboard)),\n filter(({ mode, type }) => {\n if (mode === \"global\") {\n const active = getActiveElement()\n if (typeof active !== \"undefined\")\n return !isSusceptibleToKeyboard(active, type)\n }\n return true\n }),\n share()\n )\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport { Subject } from \"rxjs\"\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Retrieve location\n *\n * This function returns a `URL` object (and not `Location`) to normalize the\n * typings across the application. Furthermore, locations need to be tracked\n * without setting them and `Location` is a singleton which represents the\n * current location.\n *\n * @returns URL\n */\nexport function getLocation(): URL {\n return new URL(location.href)\n}\n\n/**\n * Set location\n *\n * @param url - URL to change to\n */\nexport function setLocation(url: URL): void {\n location.href = url.href\n}\n\n/* ------------------------------------------------------------------------- */\n\n/**\n * Watch location\n *\n * @returns Location subject\n */\nexport function watchLocation(): Subject {\n return new Subject()\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport { JSX as JSXInternal } from \"preact\"\n\n/* ----------------------------------------------------------------------------\n * Helper types\n * ------------------------------------------------------------------------- */\n\n/**\n * HTML attributes\n */\ntype Attributes =\n & JSXInternal.HTMLAttributes\n & JSXInternal.SVGAttributes\n & Record\n\n/**\n * Child element\n */\ntype Child =\n | HTMLElement\n | Text\n | string\n | number\n\n/* ----------------------------------------------------------------------------\n * Helper functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Append a child node to an element\n *\n * @param el - Element\n * @param child - Child node(s)\n */\nfunction appendChild(el: HTMLElement, child: Child | Child[]): void {\n\n /* Handle primitive types (including raw HTML) */\n if (typeof child === \"string\" || typeof child === \"number\") {\n el.innerHTML += child.toString()\n\n /* Handle nodes */\n } else if (child instanceof Node) {\n el.appendChild(child)\n\n /* Handle nested children */\n } else if (Array.isArray(child)) {\n for (const node of child)\n appendChild(el, node)\n }\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * JSX factory\n *\n * @template T - Element type\n *\n * @param tag - HTML tag\n * @param attributes - HTML attributes\n * @param children - Child elements\n *\n * @returns Element\n */\nexport function h(\n tag: T, attributes?: Attributes | null, ...children: Child[]\n): HTMLElementTagNameMap[T]\n\nexport function h(\n tag: string, attributes?: Attributes | null, ...children: Child[]\n): T\n\nexport function h(\n tag: string, attributes?: Attributes | null, ...children: Child[]\n): T {\n const el = document.createElement(tag)\n\n /* Set attributes, if any */\n if (attributes)\n for (const attr of Object.keys(attributes)) {\n if (typeof attributes[attr] === \"undefined\")\n continue\n\n /* Set default attribute or boolean */\n if (typeof attributes[attr] !== \"boolean\")\n el.setAttribute(attr, attributes[attr])\n else\n el.setAttribute(attr, \"\")\n }\n\n /* Append child nodes */\n for (const child of children)\n appendChild(el, child)\n\n /* Return element */\n return el as T\n}\n\n/* ----------------------------------------------------------------------------\n * Namespace\n * ------------------------------------------------------------------------- */\n\nexport declare namespace h {\n namespace JSX {\n type Element = HTMLElement\n type IntrinsicElements = JSXInternal.IntrinsicElements\n }\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Truncate a string after the given number of characters\n *\n * This is not a very reasonable approach, since the summaries kind of suck.\n * It would be better to create something more intelligent, highlighting the\n * search occurrences and making a better summary out of it, but this note was\n * written three years ago, so who knows if we'll ever fix it.\n *\n * @param value - Value to be truncated\n * @param n - Number of characters\n *\n * @returns Truncated value\n */\nexport function truncate(value: string, n: number): string {\n let i = n\n if (value.length > i) {\n while (value[i] !== \" \" && --i > 0) { /* keep eating */ }\n return `${value.substring(0, i)}...`\n }\n return value\n}\n\n/**\n * Round a number for display with repository facts\n *\n * This is a reverse-engineered version of GitHub's weird rounding algorithm\n * for stars, forks and all other numbers. While all numbers below `1,000` are\n * returned as-is, bigger numbers are converted to fixed numbers:\n *\n * - `1,049` => `1k`\n * - `1,050` => `1.1k`\n * - `1,949` => `1.9k`\n * - `1,950` => `2k`\n *\n * @param value - Original value\n *\n * @returns Rounded value\n */\nexport function round(value: number): string {\n if (value > 999) {\n const digits = +((value - 950) % 1000 > 99)\n return `${((value + 0.000001) / 1000).toFixed(digits)}k`\n } else {\n return value.toString()\n }\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n Observable,\n filter,\n fromEvent,\n map,\n shareReplay,\n startWith\n} from \"rxjs\"\n\nimport { getOptionalElement } from \"~/browser\"\nimport { h } from \"~/utilities\"\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Retrieve location hash\n *\n * @returns Location hash\n */\nexport function getLocationHash(): string {\n return location.hash.substring(1)\n}\n\n/**\n * Set location hash\n *\n * Setting a new fragment identifier via `location.hash` will have no effect\n * if the value doesn't change. When a new fragment identifier is set, we want\n * the browser to target the respective element at all times, which is why we\n * use this dirty little trick.\n *\n * @param hash - Location hash\n */\nexport function setLocationHash(hash: string): void {\n const el = h(\"a\", { href: hash })\n el.addEventListener(\"click\", ev => ev.stopPropagation())\n el.click()\n}\n\n/* ------------------------------------------------------------------------- */\n\n/**\n * Watch location hash\n *\n * @returns Location hash observable\n */\nexport function watchLocationHash(): Observable {\n return fromEvent(window, \"hashchange\")\n .pipe(\n map(getLocationHash),\n startWith(getLocationHash()),\n filter(hash => hash.length > 0),\n shareReplay(1)\n )\n}\n\n/**\n * Watch location target\n *\n * @returns Location target observable\n */\nexport function watchLocationTarget(): Observable {\n return watchLocationHash()\n .pipe(\n map(id => getOptionalElement(`[id=\"${id}\"]`)!),\n filter(el => typeof el !== \"undefined\")\n )\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n EMPTY,\n Observable,\n fromEvent,\n fromEventPattern,\n map,\n merge,\n startWith,\n switchMap\n} from \"rxjs\"\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Watch media query\n *\n * Note that although `MediaQueryList.addListener` is deprecated we have to\n * use it, because it's the only way to ensure proper downward compatibility.\n *\n * @see https://bit.ly/3dUBH2m - GitHub issue\n *\n * @param query - Media query\n *\n * @returns Media observable\n */\nexport function watchMedia(query: string): Observable {\n const media = matchMedia(query)\n return fromEventPattern(next => (\n media.addListener(() => next(media.matches))\n ))\n .pipe(\n startWith(media.matches)\n )\n}\n\n/**\n * Watch print mode\n *\n * @returns Print observable\n */\nexport function watchPrint(): Observable {\n const media = matchMedia(\"print\")\n return merge(\n fromEvent(window, \"beforeprint\").pipe(map(() => true)),\n fromEvent(window, \"afterprint\").pipe(map(() => false))\n )\n .pipe(\n startWith(media.matches)\n )\n}\n\n/* ------------------------------------------------------------------------- */\n\n/**\n * Toggle an observable with a media observable\n *\n * @template T - Data type\n *\n * @param query$ - Media observable\n * @param factory - Observable factory\n *\n * @returns Toggled observable\n */\nexport function at(\n query$: Observable, factory: () => Observable\n): Observable {\n return query$\n .pipe(\n switchMap(active => active ? factory() : EMPTY)\n )\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n EMPTY,\n Observable,\n catchError,\n from,\n map,\n of,\n shareReplay,\n switchMap,\n throwError\n} from \"rxjs\"\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Fetch the given URL\n *\n * If the request fails (e.g. when dispatched from `file://` locations), the\n * observable will complete without emitting a value.\n *\n * @param url - Request URL\n * @param options - Options\n *\n * @returns Response observable\n */\nexport function request(\n url: URL | string, options: RequestInit = { credentials: \"same-origin\" }\n): Observable {\n return from(fetch(`${url}`, options))\n .pipe(\n catchError(() => EMPTY),\n switchMap(res => res.status !== 200\n ? throwError(() => new Error(res.statusText))\n : of(res)\n )\n )\n}\n\n/**\n * Fetch JSON from the given URL\n *\n * @template T - Data type\n *\n * @param url - Request URL\n * @param options - Options\n *\n * @returns Data observable\n */\nexport function requestJSON(\n url: URL | string, options?: RequestInit\n): Observable {\n return request(url, options)\n .pipe(\n switchMap(res => res.json()),\n shareReplay(1)\n )\n}\n\n/**\n * Fetch XML from the given URL\n *\n * @param url - Request URL\n * @param options - Options\n *\n * @returns Data observable\n */\nexport function requestXML(\n url: URL | string, options?: RequestInit\n): Observable {\n const dom = new DOMParser()\n return request(url, options)\n .pipe(\n switchMap(res => res.text()),\n map(res => dom.parseFromString(res, \"text/xml\")),\n shareReplay(1)\n )\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n Observable,\n defer,\n finalize,\n fromEvent,\n map,\n merge,\n switchMap,\n take,\n throwError\n} from \"rxjs\"\n\nimport { h } from \"~/utilities\"\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Create and load a `script` element\n *\n * This function returns an observable that will emit when the script was\n * successfully loaded, or throw an error if it didn't.\n *\n * @param src - Script URL\n *\n * @returns Script observable\n */\nexport function watchScript(src: string): Observable {\n const script = h(\"script\", { src })\n return defer(() => {\n document.head.appendChild(script)\n return merge(\n fromEvent(script, \"load\"),\n fromEvent(script, \"error\")\n .pipe(\n switchMap(() => (\n throwError(() => new ReferenceError(`Invalid script: ${src}`))\n ))\n )\n )\n .pipe(\n map(() => undefined),\n finalize(() => document.head.removeChild(script)),\n take(1)\n )\n })\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n Observable,\n fromEvent,\n map,\n merge,\n startWith\n} from \"rxjs\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Viewport offset\n */\nexport interface ViewportOffset {\n x: number /* Horizontal offset */\n y: number /* Vertical offset */\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Retrieve viewport offset\n *\n * On iOS Safari, viewport offset can be negative due to overflow scrolling.\n * As this may induce strange behaviors downstream, we'll just limit it to 0.\n *\n * @returns Viewport offset\n */\nexport function getViewportOffset(): ViewportOffset {\n return {\n x: Math.max(0, scrollX),\n y: Math.max(0, scrollY)\n }\n}\n\n/* ------------------------------------------------------------------------- */\n\n/**\n * Watch viewport offset\n *\n * @returns Viewport offset observable\n */\nexport function watchViewportOffset(): Observable {\n return merge(\n fromEvent(window, \"scroll\", { passive: true }),\n fromEvent(window, \"resize\", { passive: true })\n )\n .pipe(\n map(getViewportOffset),\n startWith(getViewportOffset())\n )\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n Observable,\n fromEvent,\n map,\n startWith\n} from \"rxjs\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Viewport size\n */\nexport interface ViewportSize {\n width: number /* Viewport width */\n height: number /* Viewport height */\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Retrieve viewport size\n *\n * @returns Viewport size\n */\nexport function getViewportSize(): ViewportSize {\n return {\n width: innerWidth,\n height: innerHeight\n }\n}\n\n/* ------------------------------------------------------------------------- */\n\n/**\n * Watch viewport size\n *\n * @returns Viewport size observable\n */\nexport function watchViewportSize(): Observable {\n return fromEvent(window, \"resize\", { passive: true })\n .pipe(\n map(getViewportSize),\n startWith(getViewportSize())\n )\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n Observable,\n combineLatest,\n map,\n shareReplay\n} from \"rxjs\"\n\nimport {\n ViewportOffset,\n watchViewportOffset\n} from \"../offset\"\nimport {\n ViewportSize,\n watchViewportSize\n} from \"../size\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Viewport\n */\nexport interface Viewport {\n offset: ViewportOffset /* Viewport offset */\n size: ViewportSize /* Viewport size */\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Watch viewport\n *\n * @returns Viewport observable\n */\nexport function watchViewport(): Observable {\n return combineLatest([\n watchViewportOffset(),\n watchViewportSize()\n ])\n .pipe(\n map(([offset, size]) => ({ offset, size })),\n shareReplay(1)\n )\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n Observable,\n combineLatest,\n distinctUntilKeyChanged,\n map\n} from \"rxjs\"\n\nimport { Header } from \"~/components\"\n\nimport { getElementOffset } from \"../../element\"\nimport { Viewport } from \"../_\"\n\n/* ----------------------------------------------------------------------------\n * Helper types\n * ------------------------------------------------------------------------- */\n\n/**\n * Watch options\n */\ninterface WatchOptions {\n viewport$: Observable /* Viewport observable */\n header$: Observable
/* Header observable */\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Watch viewport relative to element\n *\n * @param el - Element\n * @param options - Options\n *\n * @returns Viewport observable\n */\nexport function watchViewportAt(\n el: HTMLElement, { viewport$, header$ }: WatchOptions\n): Observable {\n const size$ = viewport$\n .pipe(\n distinctUntilKeyChanged(\"size\")\n )\n\n /* Compute element offset */\n const offset$ = combineLatest([size$, header$])\n .pipe(\n map(() => getElementOffset(el))\n )\n\n /* Compute relative viewport, return hot observable */\n return combineLatest([header$, viewport$, offset$])\n .pipe(\n map(([{ height }, { offset, size }, { x, y }]) => ({\n offset: {\n x: offset.x - x,\n y: offset.y - y + height\n },\n size\n }))\n )\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n Observable,\n Subject,\n fromEvent,\n map,\n share,\n switchMap,\n tap,\n throttle\n} from \"rxjs\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Worker message\n */\nexport interface WorkerMessage {\n type: unknown /* Message type */\n data?: unknown /* Message data */\n}\n\n/**\n * Worker handler\n *\n * @template T - Message type\n */\nexport interface WorkerHandler<\n T extends WorkerMessage\n> {\n tx$: Subject /* Message transmission subject */\n rx$: Observable /* Message receive observable */\n}\n\n/* ----------------------------------------------------------------------------\n * Helper types\n * ------------------------------------------------------------------------- */\n\n/**\n * Watch options\n *\n * @template T - Worker message type\n */\ninterface WatchOptions {\n tx$: Observable /* Message transmission observable */\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Watch a web worker\n *\n * This function returns an observable that sends all values emitted by the\n * message observable to the web worker. Web worker communication is expected\n * to be bidirectional (request-response) and synchronous. Messages that are\n * emitted during a pending request are throttled, the last one is emitted.\n *\n * @param worker - Web worker\n * @param options - Options\n *\n * @returns Worker message observable\n */\nexport function watchWorker(\n worker: Worker, { tx$ }: WatchOptions\n): Observable {\n\n /* Intercept messages from worker-like objects */\n const rx$ = fromEvent(worker, \"message\")\n .pipe(\n map(({ data }) => data as T)\n )\n\n /* Send and receive messages, return hot observable */\n return tx$\n .pipe(\n throttle(() => rx$, { leading: true, trailing: true }),\n tap(message => worker.postMessage(message)),\n switchMap(() => rx$),\n share()\n )\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport { getElement, getLocation } from \"~/browser\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Feature flag\n */\nexport type Flag =\n | \"announce.dismiss\" /* Dismissable announcement bar */\n | \"content.code.annotate\" /* Code annotations */\n | \"content.lazy\" /* Lazy content elements */\n | \"content.tabs.link\" /* Link content tabs */\n | \"header.autohide\" /* Hide header */\n | \"navigation.expand\" /* Automatic expansion */\n | \"navigation.indexes\" /* Section pages */\n | \"navigation.instant\" /* Instant loading */\n | \"navigation.sections\" /* Section navigation */\n | \"navigation.tabs\" /* Tabs navigation */\n | \"navigation.tabs.sticky\" /* Tabs navigation (sticky) */\n | \"navigation.top\" /* Back-to-top button */\n | \"navigation.tracking\" /* Anchor tracking */\n | \"search.highlight\" /* Search highlighting */\n | \"search.share\" /* Search sharing */\n | \"search.suggest\" /* Search suggestions */\n | \"toc.follow\" /* Following table of contents */\n | \"toc.integrate\" /* Integrated table of contents */\n\n/* ------------------------------------------------------------------------- */\n\n/**\n * Translation\n */\nexport type Translation =\n | \"clipboard.copy\" /* Copy to clipboard */\n | \"clipboard.copied\" /* Copied to clipboard */\n | \"search.config.lang\" /* Search language */\n | \"search.config.pipeline\" /* Search pipeline */\n | \"search.config.separator\" /* Search separator */\n | \"search.placeholder\" /* Search */\n | \"search.result.placeholder\" /* Type to start searching */\n | \"search.result.none\" /* No matching documents */\n | \"search.result.one\" /* 1 matching document */\n | \"search.result.other\" /* # matching documents */\n | \"search.result.more.one\" /* 1 more on this page */\n | \"search.result.more.other\" /* # more on this page */\n | \"search.result.term.missing\" /* Missing */\n | \"select.version.title\" /* Version selector */\n\n/**\n * Translations\n */\nexport type Translations = Record\n\n/* ------------------------------------------------------------------------- */\n\n/**\n * Versioning\n */\nexport interface Versioning {\n provider: \"mike\" /* Version provider */\n default?: string /* Default version */\n}\n\n/**\n * Configuration\n */\nexport interface Config {\n base: string /* Base URL */\n features: Flag[] /* Feature flags */\n translations: Translations /* Translations */\n search: string /* Search worker URL */\n tags?: Record /* Tags mapping */\n version?: Versioning /* Versioning */\n}\n\n/* ----------------------------------------------------------------------------\n * Data\n * ------------------------------------------------------------------------- */\n\n/**\n * Retrieve global configuration and make base URL absolute\n */\nconst script = getElement(\"#__config\")\nconst config: Config = JSON.parse(script.textContent!)\nconfig.base = `${new URL(config.base, getLocation())}`\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Retrieve global configuration\n *\n * @returns Global configuration\n */\nexport function configuration(): Config {\n return config\n}\n\n/**\n * Check whether a feature flag is enabled\n *\n * @param flag - Feature flag\n *\n * @returns Test result\n */\nexport function feature(flag: Flag): boolean {\n return config.features.includes(flag)\n}\n\n/**\n * Retrieve the translation for the given key\n *\n * @param key - Key to be translated\n * @param value - Positional value, if any\n *\n * @returns Translation\n */\nexport function translation(\n key: Translation, value?: string | number\n): string {\n return typeof value !== \"undefined\"\n ? config.translations[key].replace(\"#\", value.toString())\n : config.translations[key]\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport { getElement, getElements } from \"~/browser\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Component type\n */\nexport type ComponentType =\n | \"announce\" /* Announcement bar */\n | \"container\" /* Container */\n | \"consent\" /* Consent */\n | \"content\" /* Content */\n | \"dialog\" /* Dialog */\n | \"header\" /* Header */\n | \"header-title\" /* Header title */\n | \"header-topic\" /* Header topic */\n | \"main\" /* Main area */\n | \"outdated\" /* Version warning */\n | \"palette\" /* Color palette */\n | \"search\" /* Search */\n | \"search-query\" /* Search input */\n | \"search-result\" /* Search results */\n | \"search-share\" /* Search sharing */\n | \"search-suggest\" /* Search suggestions */\n | \"sidebar\" /* Sidebar */\n | \"skip\" /* Skip link */\n | \"source\" /* Repository information */\n | \"tabs\" /* Navigation tabs */\n | \"toc\" /* Table of contents */\n | \"top\" /* Back-to-top button */\n\n/**\n * Component\n *\n * @template T - Component type\n * @template U - Reference type\n */\nexport type Component<\n T extends {} = {},\n U extends HTMLElement = HTMLElement\n> =\n T & {\n ref: U /* Component reference */\n }\n\n/* ----------------------------------------------------------------------------\n * Helper types\n * ------------------------------------------------------------------------- */\n\n/**\n * Component type map\n */\ninterface ComponentTypeMap {\n \"announce\": HTMLElement /* Announcement bar */\n \"container\": HTMLElement /* Container */\n \"consent\": HTMLElement /* Consent */\n \"content\": HTMLElement /* Content */\n \"dialog\": HTMLElement /* Dialog */\n \"header\": HTMLElement /* Header */\n \"header-title\": HTMLElement /* Header title */\n \"header-topic\": HTMLElement /* Header topic */\n \"main\": HTMLElement /* Main area */\n \"outdated\": HTMLElement /* Version warning */\n \"palette\": HTMLElement /* Color palette */\n \"search\": HTMLElement /* Search */\n \"search-query\": HTMLInputElement /* Search input */\n \"search-result\": HTMLElement /* Search results */\n \"search-share\": HTMLAnchorElement /* Search sharing */\n \"search-suggest\": HTMLElement /* Search suggestions */\n \"sidebar\": HTMLElement /* Sidebar */\n \"skip\": HTMLAnchorElement /* Skip link */\n \"source\": HTMLAnchorElement /* Repository information */\n \"tabs\": HTMLElement /* Navigation tabs */\n \"toc\": HTMLElement /* Table of contents */\n \"top\": HTMLAnchorElement /* Back-to-top button */\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Retrieve the element for a given component or throw a reference error\n *\n * @template T - Component type\n *\n * @param type - Component type\n * @param node - Node of reference\n *\n * @returns Element\n */\nexport function getComponentElement(\n type: T, node: ParentNode = document\n): ComponentTypeMap[T] {\n return getElement(`[data-md-component=${type}]`, node)\n}\n\n/**\n * Retrieve all elements for a given component\n *\n * @template T - Component type\n *\n * @param type - Component type\n * @param node - Node of reference\n *\n * @returns Elements\n */\nexport function getComponentElements(\n type: T, node: ParentNode = document\n): ComponentTypeMap[T][] {\n return getElements(`[data-md-component=${type}]`, node)\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n EMPTY,\n Observable,\n Subject,\n defer,\n finalize,\n fromEvent,\n map,\n startWith,\n tap\n} from \"rxjs\"\n\nimport { feature } from \"~/_\"\nimport { getElement } from \"~/browser\"\n\nimport { Component } from \"../_\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Announcement bar\n */\nexport interface Announce {\n hash: number /* Content hash */\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Watch announcement bar\n *\n * @param el - Announcement bar element\n *\n * @returns Announcement bar observable\n */\nexport function watchAnnounce(\n el: HTMLElement\n): Observable {\n const button = getElement(\".md-typeset > :first-child\", el)\n return fromEvent(button, \"click\", { once: true })\n .pipe(\n map(() => getElement(\".md-typeset\", el)),\n map(content => ({ hash: __md_hash(content.innerHTML) }))\n )\n}\n\n/**\n * Mount announcement bar\n *\n * @param el - Announcement bar element\n *\n * @returns Announcement bar component observable\n */\nexport function mountAnnounce(\n el: HTMLElement\n): Observable> {\n if (!feature(\"announce.dismiss\") || !el.childElementCount)\n return EMPTY\n\n /* Mount component on subscription */\n return defer(() => {\n const push$ = new Subject()\n push$\n .pipe(\n startWith({ hash: __md_get(\"__announce\") })\n )\n .subscribe(({ hash }) => {\n if (hash && hash === (__md_get(\"__announce\") ?? hash)) {\n el.hidden = true\n\n /* Persist preference in local storage */\n __md_set(\"__announce\", hash)\n }\n })\n\n /* Create and return component */\n return watchAnnounce(el)\n .pipe(\n tap(state => push$.next(state)),\n finalize(() => push$.complete()),\n map(state => ({ ref: el, ...state }))\n )\n })\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n Observable,\n Subject,\n finalize,\n map,\n tap\n} from \"rxjs\"\n\nimport { Component } from \"../_\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Consent\n */\nexport interface Consent {\n hidden: boolean /* Consent is hidden */\n}\n\n/**\n * Consent defaults\n */\nexport interface ConsentDefaults {\n analytics?: boolean /* Consent for Analytics */\n github?: boolean /* Consent for GitHub */\n}\n\n/* ----------------------------------------------------------------------------\n * Helper types\n * ------------------------------------------------------------------------- */\n\n/**\n * Watch options\n */\ninterface WatchOptions {\n target$: Observable /* Target observable */\n}\n\n/**\n * Mount options\n */\ninterface MountOptions {\n target$: Observable /* Target observable */\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Watch consent\n *\n * @param el - Consent element\n * @param options - Options\n *\n * @returns Consent observable\n */\nexport function watchConsent(\n el: HTMLElement, { target$ }: WatchOptions\n): Observable {\n return target$\n .pipe(\n map(target => ({ hidden: target !== el }))\n )\n}\n\n/* ------------------------------------------------------------------------- */\n\n/**\n * Mount consent\n *\n * @param el - Consent element\n * @param options - Options\n *\n * @returns Consent component observable\n */\nexport function mountConsent(\n el: HTMLElement, options: MountOptions\n): Observable> {\n const internal$ = new Subject()\n internal$.subscribe(({ hidden }) => {\n el.hidden = hidden\n })\n\n /* Create and return component */\n return watchConsent(el, options)\n .pipe(\n tap(state => internal$.next(state)),\n finalize(() => internal$.complete()),\n map(state => ({ ref: el, ...state }))\n )\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport ClipboardJS from \"clipboard\"\nimport {\n EMPTY,\n Observable,\n Subject,\n defer,\n distinctUntilChanged,\n distinctUntilKeyChanged,\n filter,\n finalize,\n map,\n mergeWith,\n switchMap,\n take,\n tap\n} from \"rxjs\"\n\nimport { feature } from \"~/_\"\nimport {\n getElementContentSize,\n watchElementSize,\n watchElementVisibility\n} from \"~/browser\"\nimport { renderClipboardButton } from \"~/templates\"\n\nimport { Component } from \"../../../_\"\nimport {\n Annotation,\n mountAnnotationList\n} from \"../../annotation\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Code block\n */\nexport interface CodeBlock {\n scrollable: boolean /* Code block overflows */\n}\n\n/* ----------------------------------------------------------------------------\n * Helper types\n * ------------------------------------------------------------------------- */\n\n/**\n * Mount options\n */\ninterface MountOptions {\n target$: Observable /* Location target observable */\n print$: Observable /* Media print observable */\n}\n\n/* ----------------------------------------------------------------------------\n * Data\n * ------------------------------------------------------------------------- */\n\n/**\n * Global sequence number for code blocks\n */\nlet sequence = 0\n\n/* ----------------------------------------------------------------------------\n * Helper functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Find candidate list element directly following a code block\n *\n * @param el - Code block element\n *\n * @returns List element or nothing\n */\nfunction findCandidateList(el: HTMLElement): HTMLElement | undefined {\n if (el.nextElementSibling) {\n const sibling = el.nextElementSibling as HTMLElement\n if (sibling.tagName === \"OL\")\n return sibling\n\n /* Skip empty paragraphs - see https://bit.ly/3r4ZJ2O */\n else if (sibling.tagName === \"P\" && !sibling.children.length)\n return findCandidateList(sibling)\n }\n\n /* Everything else */\n return undefined\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Watch code block\n *\n * This function monitors size changes of the viewport, as well as switches of\n * content tabs with embedded code blocks, as both may trigger overflow.\n *\n * @param el - Code block element\n *\n * @returns Code block observable\n */\nexport function watchCodeBlock(\n el: HTMLElement\n): Observable {\n return watchElementSize(el)\n .pipe(\n map(({ width }) => {\n const content = getElementContentSize(el)\n return {\n scrollable: content.width > width\n }\n }),\n distinctUntilKeyChanged(\"scrollable\")\n )\n}\n\n/**\n * Mount code block\n *\n * This function ensures that an overflowing code block is focusable through\n * keyboard, so it can be scrolled without a mouse to improve on accessibility.\n * Furthermore, if code annotations are enabled, they are mounted if and only\n * if the code block is currently visible, e.g., not in a hidden content tab.\n *\n * Note that code blocks may be mounted eagerly or lazily. If they're mounted\n * lazily (on first visibility), code annotation anchor links will not work,\n * as they are evaluated on initial page load, and code annotations in general\n * might feel a little bumpier.\n *\n * @param el - Code block element\n * @param options - Options\n *\n * @returns Code block and annotation component observable\n */\nexport function mountCodeBlock(\n el: HTMLElement, options: MountOptions\n): Observable> {\n const { matches: hover } = matchMedia(\"(hover)\")\n\n /* Defer mounting of code block - see https://bit.ly/3vHVoVD */\n const factory$ = defer(() => {\n const push$ = new Subject()\n push$.subscribe(({ scrollable }) => {\n if (scrollable && hover)\n el.setAttribute(\"tabindex\", \"0\")\n else\n el.removeAttribute(\"tabindex\")\n })\n\n /* Render button for Clipboard.js integration */\n if (ClipboardJS.isSupported()) {\n const parent = el.closest(\"pre\")!\n parent.id = `__code_${++sequence}`\n parent.insertBefore(\n renderClipboardButton(parent.id),\n el\n )\n }\n\n /* Handle code annotations */\n const container = el.closest(\".highlight\")\n if (container instanceof HTMLElement) {\n const list = findCandidateList(container)\n\n /* Mount code annotations, if enabled */\n if (typeof list !== \"undefined\" && (\n container.classList.contains(\"annotate\") ||\n feature(\"content.code.annotate\")\n )) {\n const annotations$ = mountAnnotationList(list, el, options)\n\n /* Create and return component */\n return watchCodeBlock(el)\n .pipe(\n tap(state => push$.next(state)),\n finalize(() => push$.complete()),\n map(state => ({ ref: el, ...state })),\n mergeWith(\n watchElementSize(container)\n .pipe(\n map(({ width, height }) => width && height),\n distinctUntilChanged(),\n switchMap(active => active ? annotations$ : EMPTY)\n )\n )\n )\n }\n }\n\n /* Create and return component */\n return watchCodeBlock(el)\n .pipe(\n tap(state => push$.next(state)),\n finalize(() => push$.complete()),\n map(state => ({ ref: el, ...state }))\n )\n })\n\n /* Mount code block lazily */\n if (feature(\"content.lazy\"))\n return watchElementVisibility(el)\n .pipe(\n filter(visible => visible),\n take(1),\n switchMap(() => factory$)\n )\n\n /* Mount code block */\n return factory$\n}\n", "/*\n * Copyright (c) 2016-2021 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport { h } from \"~/utilities\"\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Render a tooltip\n *\n * @param id - Tooltip identifier\n *\n * @returns Element\n */\nexport function renderTooltip(id?: string): HTMLElement {\n return (\n
\n
\n
\n )\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport { h } from \"~/utilities\"\n\nimport { renderTooltip } from \"../tooltip\"\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Render an annotation\n *\n * @param id - Annotation identifier\n * @param prefix - Tooltip identifier prefix\n *\n * @returns Element\n */\nexport function renderAnnotation(\n id: string | number, prefix?: string\n): HTMLElement {\n prefix = prefix ? `${prefix}_annotation_${id}` : undefined\n\n /* Render tooltip with anchor, if given */\n if (prefix) {\n const anchor = prefix ? `#${prefix}` : undefined\n return (\n \n )\n } else {\n return (\n \n )\n }\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport { translation } from \"~/_\"\nimport { h } from \"~/utilities\"\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Render a 'copy-to-clipboard' button\n *\n * @param id - Unique identifier\n *\n * @returns Element\n */\nexport function renderClipboardButton(id: string): HTMLElement {\n return (\n code`}\n >\n )\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport { ComponentChild } from \"preact\"\n\nimport { configuration, feature, translation } from \"~/_\"\nimport {\n SearchDocument,\n SearchMetadata,\n SearchResultItem\n} from \"~/integrations/search\"\nimport { h, truncate } from \"~/utilities\"\n\n/* ----------------------------------------------------------------------------\n * Helper types\n * ------------------------------------------------------------------------- */\n\n/**\n * Render flag\n */\nconst enum Flag {\n TEASER = 1, /* Render teaser */\n PARENT = 2 /* Render as parent */\n}\n\n/* ----------------------------------------------------------------------------\n * Helper function\n * ------------------------------------------------------------------------- */\n\n/**\n * Render a search document\n *\n * @param document - Search document\n * @param flag - Render flags\n *\n * @returns Element\n */\nfunction renderSearchDocument(\n document: SearchDocument & SearchMetadata, flag: Flag\n): HTMLElement {\n const parent = flag & Flag.PARENT\n const teaser = flag & Flag.TEASER\n\n /* Render missing query terms */\n const missing = Object.keys(document.terms)\n .filter(key => !document.terms[key])\n .reduce((list, key) => [\n ...list, {key}, \" \"\n ], [])\n .slice(0, -1)\n\n /* Assemble query string for highlighting */\n const url = new URL(document.location)\n if (feature(\"search.highlight\"))\n url.searchParams.set(\"h\", Object.entries(document.terms)\n .filter(([, match]) => match)\n .reduce((highlight, [value]) => `${highlight} ${value}`.trim(), \"\")\n )\n\n /* Render article or section, depending on flags */\n const { tags } = configuration()\n return (\n \n \n {parent > 0 &&
}\n

{document.title}

\n {teaser > 0 && document.text.length > 0 &&\n

\n {truncate(document.text, 320)}\n

\n }\n {document.tags && (\n
\n {document.tags.map(tag => {\n const id = tag.replace(/<[^>]+>/g, \"\")\n const type = tags\n ? id in tags\n ? `md-tag-icon md-tag-icon--${tags[id]}`\n : \"md-tag-icon\"\n : \"\"\n return (\n {tag}\n )\n })}\n
\n )}\n {teaser > 0 && missing.length > 0 &&\n

\n {translation(\"search.result.term.missing\")}: {...missing}\n

\n }\n \n \n )\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Render a search result\n *\n * @param result - Search result\n *\n * @returns Element\n */\nexport function renderSearchResultItem(\n result: SearchResultItem\n): HTMLElement {\n const threshold = result[0].score\n const docs = [...result]\n\n /* Find and extract parent article */\n const parent = docs.findIndex(doc => !doc.location.includes(\"#\"))\n const [article] = docs.splice(parent, 1)\n\n /* Determine last index above threshold */\n let index = docs.findIndex(doc => doc.score < threshold)\n if (index === -1)\n index = docs.length\n\n /* Partition sections */\n const best = docs.slice(0, index)\n const more = docs.slice(index)\n\n /* Render children */\n const children = [\n renderSearchDocument(article, Flag.PARENT | +(!parent && index === 0)),\n ...best.map(section => renderSearchDocument(section, Flag.TEASER)),\n ...more.length ? [\n
\n \n {more.length > 0 && more.length === 1\n ? translation(\"search.result.more.one\")\n : translation(\"search.result.more.other\", more.length)\n }\n \n {...more.map(section => renderSearchDocument(section, Flag.TEASER))}\n
\n ] : []\n ]\n\n /* Render search result */\n return (\n
  • \n {children}\n
    • \n )\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport { SourceFacts } from \"~/components\"\nimport { h, round } from \"~/utilities\"\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Render repository facts\n *\n * @param facts - Repository facts\n *\n * @returns Element\n */\nexport function renderSourceFacts(facts: SourceFacts): HTMLElement {\n return (\n
      \n {Object.entries(facts).map(([key, value]) => (\n
    • \n {typeof value === \"number\" ? round(value) : value}\n
      • \n ))}\n
    \n )\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport { h } from \"~/utilities\"\n\n/* ----------------------------------------------------------------------------\n * Helper types\n * ------------------------------------------------------------------------- */\n\n/**\n * Tabbed control type\n */\ntype TabbedControlType =\n | \"prev\"\n | \"next\"\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Render control for content tabs\n *\n * @param type - Control type\n *\n * @returns Element\n */\nexport function renderTabbedControl(\n type: TabbedControlType\n): HTMLElement {\n const classes = `tabbed-control tabbed-control--${type}`\n return (\n \n )\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport { h } from \"~/utilities\"\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Render a table inside a wrapper to improve scrolling on mobile\n *\n * @param table - Table element\n *\n * @returns Element\n */\nexport function renderTable(table: HTMLElement): HTMLElement {\n return (\n
    \n
    \n {table}\n
    \n
    \n )\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport { configuration, translation } from \"~/_\"\nimport { h } from \"~/utilities\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Version\n */\nexport interface Version {\n version: string /* Version identifier */\n title: string /* Version title */\n aliases: string[] /* Version aliases */\n}\n\n/* ----------------------------------------------------------------------------\n * Helper functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Render a version\n *\n * @param version - Version\n *\n * @returns Element\n */\nfunction renderVersion(version: Version): HTMLElement {\n const config = configuration()\n\n /* Ensure trailing slash - see https://bit.ly/3rL5u3f */\n const url = new URL(`../${version.version}/`, config.base)\n return (\n
  • \n \n {version.title}\n \n
    • \n )\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Render a version selector\n *\n * @param versions - Versions\n * @param active - Active version\n *\n * @returns Element\n */\nexport function renderVersionSelector(\n versions: Version[], active: Version\n): HTMLElement {\n return (\n
    \n \n {active.title}\n \n
      \n {versions.map(renderVersion)}\n
    \n
    \n )\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n Observable,\n Subject,\n animationFrameScheduler,\n auditTime,\n combineLatest,\n debounceTime,\n defer,\n delay,\n filter,\n finalize,\n fromEvent,\n map,\n merge,\n switchMap,\n take,\n takeLast,\n takeUntil,\n tap,\n throttleTime,\n withLatestFrom\n} from \"rxjs\"\n\nimport {\n ElementOffset,\n getActiveElement,\n getElementSize,\n watchElementContentOffset,\n watchElementFocus,\n watchElementOffset,\n watchElementVisibility\n} from \"~/browser\"\n\nimport { Component } from \"../../../_\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Annotation\n */\nexport interface Annotation {\n active: boolean /* Annotation is active */\n offset: ElementOffset /* Annotation offset */\n}\n\n/* ----------------------------------------------------------------------------\n * Helper types\n * ------------------------------------------------------------------------- */\n\n/**\n * Mount options\n */\ninterface MountOptions {\n target$: Observable /* Location target observable */\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Watch annotation\n *\n * @param el - Annotation element\n * @param container - Containing element\n *\n * @returns Annotation observable\n */\nexport function watchAnnotation(\n el: HTMLElement, container: HTMLElement\n): Observable {\n const offset$ = defer(() => combineLatest([\n watchElementOffset(el),\n watchElementContentOffset(container)\n ]))\n .pipe(\n map(([{ x, y }, scroll]): ElementOffset => {\n const { width, height } = getElementSize(el)\n return ({\n x: x - scroll.x + width / 2,\n y: y - scroll.y + height / 2\n })\n })\n )\n\n /* Actively watch annotation on focus */\n return watchElementFocus(el)\n .pipe(\n switchMap(active => offset$\n .pipe(\n map(offset => ({ active, offset })),\n take(+!active || Infinity)\n )\n )\n )\n}\n\n/**\n * Mount annotation\n *\n * @param el - Annotation element\n * @param container - Containing element\n * @param options - Options\n *\n * @returns Annotation component observable\n */\nexport function mountAnnotation(\n el: HTMLElement, container: HTMLElement, { target$ }: MountOptions\n): Observable> {\n const [tooltip, index] = Array.from(el.children)\n\n /* Mount component on subscription */\n return defer(() => {\n const push$ = new Subject()\n const done$ = push$.pipe(takeLast(1))\n push$.subscribe({\n\n /* Handle emission */\n next({ offset }) {\n el.style.setProperty(\"--md-tooltip-x\", `${offset.x}px`)\n el.style.setProperty(\"--md-tooltip-y\", `${offset.y}px`)\n },\n\n /* Handle complete */\n complete() {\n el.style.removeProperty(\"--md-tooltip-x\")\n el.style.removeProperty(\"--md-tooltip-y\")\n }\n })\n\n /* Start animation only when annotation is visible */\n watchElementVisibility(el)\n .pipe(\n takeUntil(done$)\n )\n .subscribe(visible => {\n el.toggleAttribute(\"data-md-visible\", visible)\n })\n\n /* Toggle tooltip presence to mitigate empty lines when copying */\n merge(\n push$.pipe(filter(({ active }) => active)),\n push$.pipe(debounceTime(250), filter(({ active }) => !active))\n )\n .subscribe({\n\n /* Handle emission */\n next({ active }) {\n if (active)\n el.prepend(tooltip)\n else\n tooltip.remove()\n },\n\n /* Handle complete */\n complete() {\n el.prepend(tooltip)\n }\n })\n\n /* Toggle tooltip visibility */\n push$\n .pipe(\n auditTime(16, animationFrameScheduler)\n )\n .subscribe(({ active }) => {\n tooltip.classList.toggle(\"md-tooltip--active\", active)\n })\n\n /* Track relative origin of tooltip */\n push$\n .pipe(\n throttleTime(125, animationFrameScheduler),\n filter(() => !!el.offsetParent),\n map(() => el.offsetParent!.getBoundingClientRect()),\n map(({ x }) => x)\n )\n .subscribe({\n\n /* Handle emission */\n next(origin) {\n if (origin)\n el.style.setProperty(\"--md-tooltip-0\", `${-origin}px`)\n else\n el.style.removeProperty(\"--md-tooltip-0\")\n },\n\n /* Handle complete */\n complete() {\n el.style.removeProperty(\"--md-tooltip-0\")\n }\n })\n\n /* Allow to copy link without scrolling to anchor */\n fromEvent(index, \"click\")\n .pipe(\n takeUntil(done$),\n filter(ev => !(ev.metaKey || ev.ctrlKey))\n )\n .subscribe(ev => ev.preventDefault())\n\n /* Allow to open link in new tab or blur on close */\n fromEvent(index, \"mousedown\")\n .pipe(\n takeUntil(done$),\n withLatestFrom(push$)\n )\n .subscribe(([ev, { active }]) => {\n\n /* Open in new tab */\n if (ev.button !== 0 || ev.metaKey || ev.ctrlKey) {\n ev.preventDefault()\n\n /* Close annotation */\n } else if (active) {\n ev.preventDefault()\n\n /* Focus parent annotation, if any */\n const parent = el.parentElement!.closest(\".md-annotation\")\n if (parent instanceof HTMLElement)\n parent.focus()\n else\n getActiveElement()?.blur()\n }\n })\n\n /* Open and focus annotation on location target */\n target$\n .pipe(\n takeUntil(done$),\n filter(target => target === tooltip),\n delay(125)\n )\n .subscribe(() => el.focus())\n\n /* Create and return component */\n return watchAnnotation(el, container)\n .pipe(\n tap(state => push$.next(state)),\n finalize(() => push$.complete()),\n map(state => ({ ref: el, ...state }))\n )\n })\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n EMPTY,\n Observable,\n Subject,\n defer,\n finalize,\n merge,\n share,\n takeLast,\n takeUntil\n} from \"rxjs\"\n\nimport {\n getElement,\n getElements,\n getOptionalElement\n} from \"~/browser\"\nimport { renderAnnotation } from \"~/templates\"\n\nimport { Component } from \"../../../_\"\nimport {\n Annotation,\n mountAnnotation\n} from \"../_\"\n\n/* ----------------------------------------------------------------------------\n * Helper types\n * ------------------------------------------------------------------------- */\n\n/**\n * Mount options\n */\ninterface MountOptions {\n target$: Observable /* Location target observable */\n print$: Observable /* Media print observable */\n}\n\n/* ----------------------------------------------------------------------------\n * Helper functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Find all annotation markers in the given code block\n *\n * @param container - Containing element\n *\n * @returns Annotation markers\n */\nfunction findAnnotationMarkers(container: HTMLElement): Text[] {\n const markers: Text[] = []\n for (const el of getElements(\".c, .c1, .cm\", container)) {\n const nodes: Text[] = []\n\n /* Find all text nodes in current element */\n const it = document.createNodeIterator(el, NodeFilter.SHOW_TEXT)\n for (let node = it.nextNode(); node; node = it.nextNode())\n nodes.push(node as Text)\n\n /* Find all markers in each text node */\n for (let text of nodes) {\n let match: RegExpExecArray | null\n\n /* Split text at marker and add to list */\n while ((match = /(\\(\\d+\\))(!)?/.exec(text.textContent!))) {\n const [, id, force] = match\n if (typeof force === \"undefined\") {\n const marker = text.splitText(match.index)\n text = marker.splitText(id.length)\n markers.push(marker)\n\n /* Replace entire text with marker */\n } else {\n text.textContent = id\n markers.push(text)\n break\n }\n }\n }\n }\n return markers\n}\n\n/**\n * Swap the child nodes of two elements\n *\n * @param source - Source element\n * @param target - Target element\n */\nfunction swap(source: HTMLElement, target: HTMLElement): void {\n target.append(...Array.from(source.childNodes))\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Mount annotation list\n *\n * This function analyzes the containing code block and checks for markers\n * referring to elements in the given annotation list. If no markers are found,\n * the list is left untouched. Otherwise, list elements are rendered as\n * annotations inside the code block.\n *\n * @param el - Annotation list element\n * @param container - Containing element\n * @param options - Options\n *\n * @returns Annotation component observable\n */\nexport function mountAnnotationList(\n el: HTMLElement, container: HTMLElement, { target$, print$ }: MountOptions\n): Observable> {\n\n /* Compute prefix for tooltip anchors */\n const parent = container.closest(\"[id]\")\n const prefix = parent?.id\n\n /* Find and replace all markers with empty annotations */\n const annotations = new Map()\n for (const marker of findAnnotationMarkers(container)) {\n const [, id] = marker.textContent!.match(/\\((\\d+)\\)/)!\n if (getOptionalElement(`li:nth-child(${id})`, el)) {\n annotations.set(id, renderAnnotation(id, prefix))\n marker.replaceWith(annotations.get(id)!)\n }\n }\n\n /* Keep list if there are no annotations to render */\n if (annotations.size === 0)\n return EMPTY\n\n /* Mount component on subscription */\n return defer(() => {\n const done$ = new Subject()\n\n /* Retrieve container pairs for swapping */\n const pairs: [HTMLElement, HTMLElement][] = []\n for (const [id, annotation] of annotations)\n pairs.push([\n getElement(\".md-typeset\", annotation),\n getElement(`li:nth-child(${id})`, el)\n ])\n\n /* Handle print mode - see https://bit.ly/3rgPdpt */\n print$\n .pipe(\n takeUntil(done$.pipe(takeLast(1)))\n )\n .subscribe(active => {\n el.hidden = !active\n\n /* Show annotations in code block or list (print) */\n for (const [inner, child] of pairs)\n if (!active)\n swap(child, inner)\n else\n swap(inner, child)\n })\n\n /* Create and return component */\n return merge(...[...annotations]\n .map(([, annotation]) => (\n mountAnnotation(annotation, container, { target$ })\n ))\n )\n .pipe(\n finalize(() => done$.complete()),\n share()\n )\n })\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n Observable,\n map,\n of,\n shareReplay,\n tap\n} from \"rxjs\"\n\nimport { watchScript } from \"~/browser\"\nimport { h } from \"~/utilities\"\n\nimport { Component } from \"../../../_\"\n\nimport themeCSS from \"./index.css\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Mermaid diagram\n */\nexport interface Mermaid {}\n\n/* ----------------------------------------------------------------------------\n * Data\n * ------------------------------------------------------------------------- */\n\n/**\n * Mermaid instance observable\n */\nlet mermaid$: Observable\n\n/**\n * Global sequence number for diagrams\n */\nlet sequence = 0\n\n/* ----------------------------------------------------------------------------\n * Helper functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Fetch Mermaid script\n *\n * @returns Mermaid scripts observable\n */\nfunction fetchScripts(): Observable {\n return typeof mermaid === \"undefined\" || mermaid instanceof Element\n ? watchScript(\"https://unpkg.com/mermaid@9.1.7/dist/mermaid.min.js\")\n : of(undefined)\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Mount Mermaid diagram\n *\n * @param el - Code block element\n *\n * @returns Mermaid diagram component observable\n */\nexport function mountMermaid(\n el: HTMLElement\n): Observable> {\n el.classList.remove(\"mermaid\") // Hack: mitigate https://bit.ly/3CiN6Du\n mermaid$ ||= fetchScripts()\n .pipe(\n tap(() => mermaid.initialize({\n startOnLoad: false,\n themeCSS,\n sequence: {\n actorFontSize: \"16px\", // Hack: mitigate https://bit.ly/3y0NEi3\n messageFontSize: \"16px\",\n noteFontSize: \"16px\"\n }\n })),\n map(() => undefined),\n shareReplay(1)\n )\n\n /* Render diagram */\n mermaid$.subscribe(() => {\n el.classList.add(\"mermaid\") // Hack: mitigate https://bit.ly/3CiN6Du\n const id = `__mermaid_${sequence++}`\n const host = h(\"div\", { class: \"mermaid\" })\n mermaid.mermaidAPI.render(id, el.textContent, (svg: string) => {\n\n /* Create a shadow root and inject diagram */\n const shadow = host.attachShadow({ mode: \"closed\" })\n shadow.innerHTML = svg\n\n /* Replace code block with diagram */\n el.replaceWith(host)\n })\n })\n\n /* Create and return component */\n return mermaid$\n .pipe(\n map(() => ({ ref: el }))\n )\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n Observable,\n Subject,\n defer,\n filter,\n finalize,\n map,\n merge,\n tap\n} from \"rxjs\"\n\nimport { Component } from \"../../_\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Details\n */\nexport interface Details {\n action: \"open\" | \"close\" /* Details state */\n reveal?: boolean /* Details is revealed */\n}\n\n/* ----------------------------------------------------------------------------\n * Helper types\n * ------------------------------------------------------------------------- */\n\n/**\n * Watch options\n */\ninterface WatchOptions {\n target$: Observable /* Location target observable */\n print$: Observable /* Media print observable */\n}\n\n/**\n * Mount options\n */\ninterface MountOptions {\n target$: Observable /* Location target observable */\n print$: Observable /* Media print observable */\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Watch details\n *\n * @param el - Details element\n * @param options - Options\n *\n * @returns Details observable\n */\nexport function watchDetails(\n el: HTMLDetailsElement, { target$, print$ }: WatchOptions\n): Observable
    {\n let open = true\n return merge(\n\n /* Open and focus details on location target */\n target$\n .pipe(\n map(target => target.closest(\"details:not([open])\")!),\n filter(details => el === details),\n map(() => ({\n action: \"open\", reveal: true\n }) as Details)\n ),\n\n /* Open details on print and close afterwards */\n print$\n .pipe(\n filter(active => active || !open),\n tap(() => open = el.open),\n map(active => ({\n action: active ? \"open\" : \"close\"\n }) as Details)\n )\n )\n}\n\n/**\n * Mount details\n *\n * This function ensures that `details` tags are opened on anchor jumps and\n * prior to printing, so the whole content of the page is visible.\n *\n * @param el - Details element\n * @param options - Options\n *\n * @returns Details component observable\n */\nexport function mountDetails(\n el: HTMLDetailsElement, options: MountOptions\n): Observable> {\n return defer(() => {\n const push$ = new Subject
    ()\n push$.subscribe(({ action, reveal }) => {\n el.toggleAttribute(\"open\", action === \"open\")\n if (reveal)\n el.scrollIntoView()\n })\n\n /* Create and return component */\n return watchDetails(el, options)\n .pipe(\n tap(state => push$.next(state)),\n finalize(() => push$.complete()),\n map(state => ({ ref: el, ...state }))\n )\n })\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport { Observable, of } from \"rxjs\"\n\nimport { renderTable } from \"~/templates\"\nimport { h } from \"~/utilities\"\n\nimport { Component } from \"../../_\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Data table\n */\nexport interface DataTable {}\n\n/* ----------------------------------------------------------------------------\n * Data\n * ------------------------------------------------------------------------- */\n\n/**\n * Sentinel for replacement\n */\nconst sentinel = h(\"table\")\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Mount data table\n *\n * This function wraps a data table in another scrollable container, so it can\n * be smoothly scrolled on smaller screen sizes and won't break the layout.\n *\n * @param el - Data table element\n *\n * @returns Data table component observable\n */\nexport function mountDataTable(\n el: HTMLElement\n): Observable> {\n el.replaceWith(sentinel)\n sentinel.replaceWith(renderTable(el))\n\n /* Create and return component */\n return of({ ref: el })\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n Observable,\n Subject,\n animationFrameScheduler,\n asyncScheduler,\n auditTime,\n combineLatest,\n defer,\n finalize,\n fromEvent,\n map,\n merge,\n skip,\n startWith,\n subscribeOn,\n takeLast,\n takeUntil,\n tap,\n withLatestFrom\n} from \"rxjs\"\n\nimport { feature } from \"~/_\"\nimport {\n Viewport,\n getElement,\n getElementContentOffset,\n getElementContentSize,\n getElementOffset,\n getElementSize,\n getElements,\n watchElementContentOffset,\n watchElementSize\n} from \"~/browser\"\nimport { renderTabbedControl } from \"~/templates\"\n\nimport { Component } from \"../../_\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Content tabs\n */\nexport interface ContentTabs {\n active: HTMLLabelElement /* Active tab label */\n}\n\n/* ----------------------------------------------------------------------------\n * Helper types\n * ------------------------------------------------------------------------- */\n\n/**\n * Mount options\n */\ninterface MountOptions {\n viewport$: Observable /* Viewport observable */\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Watch content tabs\n *\n * @param el - Content tabs element\n *\n * @returns Content tabs observable\n */\nexport function watchContentTabs(\n el: HTMLElement\n): Observable {\n const inputs = getElements(\":scope > input\", el)\n const initial = inputs.find(input => input.checked) || inputs[0]\n return merge(...inputs.map(input => fromEvent(input, \"change\")\n .pipe(\n map(() => getElement(`label[for=\"${input.id}\"]`))\n )\n ))\n .pipe(\n startWith(getElement(`label[for=\"${initial.id}\"]`)),\n map(active => ({ active }))\n )\n}\n\n/**\n * Mount content tabs\n *\n * This function scrolls the active tab into view. While this functionality is\n * provided by browsers as part of `scrollInfoView`, browsers will always also\n * scroll the vertical axis, which we do not want. Thus, we decided to provide\n * this functionality ourselves.\n *\n * @param el - Content tabs element\n * @param options - Options\n *\n * @returns Content tabs component observable\n */\nexport function mountContentTabs(\n el: HTMLElement, { viewport$ }: MountOptions\n): Observable> {\n\n /* Render content tab previous button for pagination */\n const prev = renderTabbedControl(\"prev\")\n el.append(prev)\n\n /* Render content tab next button for pagination */\n const next = renderTabbedControl(\"next\")\n el.append(next)\n\n /* Mount component on subscription */\n const container = getElement(\".tabbed-labels\", el)\n return defer(() => {\n const push$ = new Subject()\n const done$ = push$.pipe(takeLast(1))\n combineLatest([push$, watchElementSize(el)])\n .pipe(\n auditTime(1, animationFrameScheduler),\n takeUntil(done$)\n )\n .subscribe({\n\n /* Handle emission */\n next([{ active }, size]) {\n const offset = getElementOffset(active)\n const { width } = getElementSize(active)\n\n /* Set tab indicator offset and width */\n el.style.setProperty(\"--md-indicator-x\", `${offset.x}px`)\n el.style.setProperty(\"--md-indicator-width\", `${width}px`)\n\n /* Scroll container to active content tab */\n const content = getElementContentOffset(container)\n if (\n offset.x < content.x ||\n offset.x + width > content.x + size.width\n )\n container.scrollTo({\n left: Math.max(0, offset.x - 16),\n behavior: \"smooth\"\n })\n },\n\n /* Handle complete */\n complete() {\n el.style.removeProperty(\"--md-indicator-x\")\n el.style.removeProperty(\"--md-indicator-width\")\n }\n })\n\n /* Hide content tab buttons on borders */\n combineLatest([\n watchElementContentOffset(container),\n watchElementSize(container)\n ])\n .pipe(\n takeUntil(done$)\n )\n .subscribe(([offset, size]) => {\n const content = getElementContentSize(container)\n prev.hidden = offset.x < 16\n next.hidden = offset.x > content.width - size.width - 16\n })\n\n /* Paginate content tab container on click */\n merge(\n fromEvent(prev, \"click\").pipe(map(() => -1)),\n fromEvent(next, \"click\").pipe(map(() => +1))\n )\n .pipe(\n takeUntil(done$)\n )\n .subscribe(direction => {\n const { width } = getElementSize(container)\n container.scrollBy({\n left: width * direction,\n behavior: \"smooth\"\n })\n })\n\n /* Set up linking of content tabs, if enabled */\n if (feature(\"content.tabs.link\"))\n push$.pipe(\n skip(1),\n withLatestFrom(viewport$)\n )\n .subscribe(([{ active }, { offset }]) => {\n const tab = active.innerText.trim()\n if (active.hasAttribute(\"data-md-switching\")) {\n active.removeAttribute(\"data-md-switching\")\n\n /* Determine viewport offset of active tab */\n } else {\n const y = el.offsetTop - offset.y\n\n /* Passively activate other tabs */\n for (const set of getElements(\"[data-tabs]\"))\n for (const input of getElements(\n \":scope > input\", set\n )) {\n const label = getElement(`label[for=\"${input.id}\"]`)\n if (\n label !== active &&\n label.innerText.trim() === tab\n ) {\n label.setAttribute(\"data-md-switching\", \"\")\n input.click()\n break\n }\n }\n\n /* Bring active tab into view */\n window.scrollTo({\n top: el.offsetTop - y\n })\n\n /* Persist active tabs in local storage */\n const tabs = __md_get(\"__tabs\") || []\n __md_set(\"__tabs\", [...new Set([tab, ...tabs])])\n }\n })\n\n /* Create and return component */\n return watchContentTabs(el)\n .pipe(\n tap(state => push$.next(state)),\n finalize(() => push$.complete()),\n map(state => ({ ref: el, ...state }))\n )\n })\n .pipe(\n subscribeOn(asyncScheduler)\n )\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport { Observable, merge } from \"rxjs\"\n\nimport { Viewport, getElements } from \"~/browser\"\n\nimport { Component } from \"../../_\"\nimport { Annotation } from \"../annotation\"\nimport {\n CodeBlock,\n Mermaid,\n mountCodeBlock,\n mountMermaid\n} from \"../code\"\nimport {\n Details,\n mountDetails\n} from \"../details\"\nimport {\n DataTable,\n mountDataTable\n} from \"../table\"\nimport {\n ContentTabs,\n mountContentTabs\n} from \"../tabs\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Content\n */\nexport type Content =\n | Annotation\n | ContentTabs\n | CodeBlock\n | Mermaid\n | DataTable\n | Details\n\n/* ----------------------------------------------------------------------------\n * Helper types\n * ------------------------------------------------------------------------- */\n\n/**\n * Mount options\n */\ninterface MountOptions {\n viewport$: Observable /* Viewport observable */\n target$: Observable /* Location target observable */\n print$: Observable /* Media print observable */\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Mount content\n *\n * This function mounts all components that are found in the content of the\n * actual article, including code blocks, data tables and details.\n *\n * @param el - Content element\n * @param options - Options\n *\n * @returns Content component observable\n */\nexport function mountContent(\n el: HTMLElement, { viewport$, target$, print$ }: MountOptions\n): Observable> {\n return merge(\n\n /* Code blocks */\n ...getElements(\"pre:not(.mermaid) > code\", el)\n .map(child => mountCodeBlock(child, { target$, print$ })),\n\n /* Mermaid diagrams */\n ...getElements(\"pre.mermaid\", el)\n .map(child => mountMermaid(child)),\n\n /* Data tables */\n ...getElements(\"table:not([class])\", el)\n .map(child => mountDataTable(child)),\n\n /* Details */\n ...getElements(\"details\", el)\n .map(child => mountDetails(child, { target$, print$ })),\n\n /* Content tabs */\n ...getElements(\"[data-tabs]\", el)\n .map(child => mountContentTabs(child, { viewport$ }))\n )\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n Observable,\n Subject,\n defer,\n delay,\n finalize,\n map,\n merge,\n of,\n switchMap,\n tap\n} from \"rxjs\"\n\nimport { getElement } from \"~/browser\"\n\nimport { Component } from \"../_\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Dialog\n */\nexport interface Dialog {\n message: string /* Dialog message */\n active: boolean /* Dialog is active */\n}\n\n/* ----------------------------------------------------------------------------\n * Helper types\n * ------------------------------------------------------------------------- */\n\n/**\n * Watch options\n */\ninterface WatchOptions {\n alert$: Subject /* Alert subject */\n}\n\n/**\n * Mount options\n */\ninterface MountOptions {\n alert$: Subject /* Alert subject */\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Watch dialog\n *\n * @param _el - Dialog element\n * @param options - Options\n *\n * @returns Dialog observable\n */\nexport function watchDialog(\n _el: HTMLElement, { alert$ }: WatchOptions\n): Observable {\n return alert$\n .pipe(\n switchMap(message => merge(\n of(true),\n of(false).pipe(delay(2000))\n )\n .pipe(\n map(active => ({ message, active }))\n )\n )\n )\n}\n\n/**\n * Mount dialog\n *\n * This function reveals the dialog in the right corner when a new alert is\n * emitted through the subject that is passed as part of the options.\n *\n * @param el - Dialog element\n * @param options - Options\n *\n * @returns Dialog component observable\n */\nexport function mountDialog(\n el: HTMLElement, options: MountOptions\n): Observable> {\n const inner = getElement(\".md-typeset\", el)\n return defer(() => {\n const push$ = new Subject()\n push$.subscribe(({ message, active }) => {\n el.classList.toggle(\"md-dialog--active\", active)\n inner.textContent = message\n })\n\n /* Create and return component */\n return watchDialog(el, options)\n .pipe(\n tap(state => push$.next(state)),\n finalize(() => push$.complete()),\n map(state => ({ ref: el, ...state }))\n )\n })\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n Observable,\n Subject,\n bufferCount,\n combineLatest,\n combineLatestWith,\n defer,\n distinctUntilChanged,\n distinctUntilKeyChanged,\n filter,\n map,\n of,\n shareReplay,\n startWith,\n switchMap,\n takeLast,\n takeUntil\n} from \"rxjs\"\n\nimport { feature } from \"~/_\"\nimport {\n Viewport,\n watchElementSize,\n watchToggle\n} from \"~/browser\"\n\nimport { Component } from \"../../_\"\nimport { Main } from \"../../main\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Header\n */\nexport interface Header {\n height: number /* Header visible height */\n hidden: boolean /* Header is hidden */\n}\n\n/* ----------------------------------------------------------------------------\n * Helper types\n * ------------------------------------------------------------------------- */\n\n/**\n * Watch options\n */\ninterface WatchOptions {\n viewport$: Observable /* Viewport observable */\n}\n\n/**\n * Mount options\n */\ninterface MountOptions {\n viewport$: Observable /* Viewport observable */\n header$: Observable
    /* Header observable */\n main$: Observable
    /* Main area observable */\n}\n\n/* ----------------------------------------------------------------------------\n * Helper functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Compute whether the header is hidden\n *\n * If the user scrolls past a certain threshold, the header can be hidden when\n * scrolling down, and shown when scrolling up.\n *\n * @param options - Options\n *\n * @returns Toggle observable\n */\nfunction isHidden({ viewport$ }: WatchOptions): Observable {\n if (!feature(\"header.autohide\"))\n return of(false)\n\n /* Compute direction and turning point */\n const direction$ = viewport$\n .pipe(\n map(({ offset: { y } }) => y),\n bufferCount(2, 1),\n map(([a, b]) => [a < b, b] as const),\n distinctUntilKeyChanged(0)\n )\n\n /* Compute whether header should be hidden */\n const hidden$ = combineLatest([viewport$, direction$])\n .pipe(\n filter(([{ offset }, [, y]]) => Math.abs(y - offset.y) > 100),\n map(([, [direction]]) => direction),\n distinctUntilChanged()\n )\n\n /* Compute threshold for hiding */\n const search$ = watchToggle(\"search\")\n return combineLatest([viewport$, search$])\n .pipe(\n map(([{ offset }, search]) => offset.y > 400 && !search),\n distinctUntilChanged(),\n switchMap(active => active ? hidden$ : of(false)),\n startWith(false)\n )\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Watch header\n *\n * @param el - Header element\n * @param options - Options\n *\n * @returns Header observable\n */\nexport function watchHeader(\n el: HTMLElement, options: WatchOptions\n): Observable
    {\n return defer(() => combineLatest([\n watchElementSize(el),\n isHidden(options)\n ]))\n .pipe(\n map(([{ height }, hidden]) => ({\n height,\n hidden\n })),\n distinctUntilChanged((a, b) => (\n a.height === b.height &&\n a.hidden === b.hidden\n )),\n shareReplay(1)\n )\n}\n\n/**\n * Mount header\n *\n * This function manages the different states of the header, i.e. whether it's\n * hidden or rendered with a shadow. This depends heavily on the main area.\n *\n * @param el - Header element\n * @param options - Options\n *\n * @returns Header component observable\n */\nexport function mountHeader(\n el: HTMLElement, { header$, main$ }: MountOptions\n): Observable> {\n return defer(() => {\n const push$ = new Subject
    ()\n const done$ = push$.pipe(takeLast(1))\n push$\n .pipe(\n distinctUntilKeyChanged(\"active\"),\n combineLatestWith(header$)\n )\n .subscribe(([{ active }, { hidden }]) => {\n el.classList.toggle(\"md-header--shadow\", active && !hidden)\n el.hidden = hidden\n })\n\n /* Link to main area */\n main$.subscribe(push$)\n\n /* Create and return component */\n return header$\n .pipe(\n takeUntil(done$),\n map(state => ({ ref: el, ...state }))\n )\n })\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n EMPTY,\n Observable,\n Subject,\n defer,\n distinctUntilKeyChanged,\n finalize,\n map,\n tap\n} from \"rxjs\"\n\nimport {\n Viewport,\n getElementSize,\n getOptionalElement,\n watchViewportAt\n} from \"~/browser\"\n\nimport { Component } from \"../../_\"\nimport { Header } from \"../_\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Header\n */\nexport interface HeaderTitle {\n active: boolean /* Header title is active */\n}\n\n/* ----------------------------------------------------------------------------\n * Helper types\n * ------------------------------------------------------------------------- */\n\n/**\n * Watch options\n */\ninterface WatchOptions {\n viewport$: Observable /* Viewport observable */\n header$: Observable
    /* Header observable */\n}\n\n/**\n * Mount options\n */\ninterface MountOptions {\n viewport$: Observable /* Viewport observable */\n header$: Observable
    /* Header observable */\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Watch header title\n *\n * @param el - Heading element\n * @param options - Options\n *\n * @returns Header title observable\n */\nexport function watchHeaderTitle(\n el: HTMLElement, { viewport$, header$ }: WatchOptions\n): Observable {\n return watchViewportAt(el, { viewport$, header$ })\n .pipe(\n map(({ offset: { y } }) => {\n const { height } = getElementSize(el)\n return {\n active: y >= height\n }\n }),\n distinctUntilKeyChanged(\"active\")\n )\n}\n\n/**\n * Mount header title\n *\n * This function swaps the header title from the site title to the title of the\n * current page when the user scrolls past the first headline.\n *\n * @param el - Header title element\n * @param options - Options\n *\n * @returns Header title component observable\n */\nexport function mountHeaderTitle(\n el: HTMLElement, options: MountOptions\n): Observable> {\n return defer(() => {\n const push$ = new Subject()\n push$.subscribe(({ active }) => {\n el.classList.toggle(\"md-header__title--active\", active)\n })\n\n /* Obtain headline, if any */\n const heading = getOptionalElement(\"article h1\")\n if (typeof heading === \"undefined\")\n return EMPTY\n\n /* Create and return component */\n return watchHeaderTitle(heading, options)\n .pipe(\n tap(state => push$.next(state)),\n finalize(() => push$.complete()),\n map(state => ({ ref: el, ...state }))\n )\n })\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n Observable,\n combineLatest,\n distinctUntilChanged,\n distinctUntilKeyChanged,\n map,\n switchMap\n} from \"rxjs\"\n\nimport {\n Viewport,\n watchElementSize\n} from \"~/browser\"\n\nimport { Header } from \"../header\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Main area\n */\nexport interface Main {\n offset: number /* Main area top offset */\n height: number /* Main area visible height */\n active: boolean /* Main area is active */\n}\n\n/* ----------------------------------------------------------------------------\n * Helper types\n * ------------------------------------------------------------------------- */\n\n/**\n * Watch options\n */\ninterface WatchOptions {\n viewport$: Observable /* Viewport observable */\n header$: Observable
    /* Header observable */\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Watch main area\n *\n * This function returns an observable that computes the visual parameters of\n * the main area which depends on the viewport vertical offset and height, as\n * well as the height of the header element, if the header is fixed.\n *\n * @param el - Main area element\n * @param options - Options\n *\n * @returns Main area observable\n */\nexport function watchMain(\n el: HTMLElement, { viewport$, header$ }: WatchOptions\n): Observable
    {\n\n /* Compute necessary adjustment for header */\n const adjust$ = header$\n .pipe(\n map(({ height }) => height),\n distinctUntilChanged()\n )\n\n /* Compute the main area's top and bottom borders */\n const border$ = adjust$\n .pipe(\n switchMap(() => watchElementSize(el)\n .pipe(\n map(({ height }) => ({\n top: el.offsetTop,\n bottom: el.offsetTop + height\n })),\n distinctUntilKeyChanged(\"bottom\")\n )\n )\n )\n\n /* Compute the main area's offset, visible height and if we scrolled past */\n return combineLatest([adjust$, border$, viewport$])\n .pipe(\n map(([header, { top, bottom }, { offset: { y }, size: { height } }]) => {\n height = Math.max(0, height\n - Math.max(0, top - y, header)\n - Math.max(0, height + y - bottom)\n )\n return {\n offset: top - header,\n height,\n active: top - header <= y\n }\n }),\n distinctUntilChanged((a, b) => (\n a.offset === b.offset &&\n a.height === b.height &&\n a.active === b.active\n ))\n )\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n Observable,\n Subject,\n asyncScheduler,\n defer,\n finalize,\n fromEvent,\n map,\n mergeMap,\n observeOn,\n of,\n shareReplay,\n startWith,\n tap\n} from \"rxjs\"\n\nimport { getElements } from \"~/browser\"\n\nimport { Component } from \"../_\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Palette colors\n */\nexport interface PaletteColor {\n scheme?: string /* Color scheme */\n primary?: string /* Primary color */\n accent?: string /* Accent color */\n}\n\n/**\n * Palette\n */\nexport interface Palette {\n index: number /* Palette index */\n color: PaletteColor /* Palette colors */\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Watch color palette\n *\n * @param inputs - Color palette element\n *\n * @returns Color palette observable\n */\nexport function watchPalette(\n inputs: HTMLInputElement[]\n): Observable {\n const current = __md_get(\"__palette\") || {\n index: inputs.findIndex(input => matchMedia(\n input.getAttribute(\"data-md-color-media\")!\n ).matches)\n }\n\n /* Emit changes in color palette */\n return of(...inputs)\n .pipe(\n mergeMap(input => fromEvent(input, \"change\")\n .pipe(\n map(() => input)\n )\n ),\n startWith(inputs[Math.max(0, current.index)]),\n map(input => ({\n index: inputs.indexOf(input),\n color: {\n scheme: input.getAttribute(\"data-md-color-scheme\"),\n primary: input.getAttribute(\"data-md-color-primary\"),\n accent: input.getAttribute(\"data-md-color-accent\")\n }\n } as Palette)),\n shareReplay(1)\n )\n}\n\n/**\n * Mount color palette\n *\n * @param el - Color palette element\n *\n * @returns Color palette component observable\n */\nexport function mountPalette(\n el: HTMLElement\n): Observable> {\n return defer(() => {\n const push$ = new Subject()\n push$.subscribe(palette => {\n document.body.setAttribute(\"data-md-color-switching\", \"\")\n\n /* Set color palette */\n for (const [key, value] of Object.entries(palette.color))\n document.body.setAttribute(`data-md-color-${key}`, value)\n\n /* Toggle visibility */\n for (let index = 0; index < inputs.length; index++) {\n const label = inputs[index].nextElementSibling\n if (label instanceof HTMLElement)\n label.hidden = palette.index !== index\n }\n\n /* Persist preference in local storage */\n __md_set(\"__palette\", palette)\n })\n\n /* Revert transition durations after color switch */\n push$.pipe(observeOn(asyncScheduler))\n .subscribe(() => {\n document.body.removeAttribute(\"data-md-color-switching\")\n })\n\n /* Create and return component */\n const inputs = getElements(\"input\", el)\n return watchPalette(inputs)\n .pipe(\n tap(state => push$.next(state)),\n finalize(() => push$.complete()),\n map(state => ({ ref: el, ...state }))\n )\n })\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport ClipboardJS from \"clipboard\"\nimport {\n Observable,\n Subject,\n map,\n tap\n} from \"rxjs\"\n\nimport { translation } from \"~/_\"\nimport { getElement } from \"~/browser\"\n\n/* ----------------------------------------------------------------------------\n * Helper types\n * ------------------------------------------------------------------------- */\n\n/**\n * Setup options\n */\ninterface SetupOptions {\n alert$: Subject /* Alert subject */\n}\n\n/* ----------------------------------------------------------------------------\n * Helper functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Extract text to copy\n *\n * @param el - HTML element\n *\n * @returns Extracted text\n */\nfunction extract(el: HTMLElement): string {\n el.setAttribute(\"data-md-copying\", \"\")\n const text = el.innerText\n el.removeAttribute(\"data-md-copying\")\n return text\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Set up Clipboard.js integration\n *\n * @param options - Options\n */\nexport function setupClipboardJS(\n { alert$ }: SetupOptions\n): void {\n if (ClipboardJS.isSupported()) {\n new Observable(subscriber => {\n new ClipboardJS(\"[data-clipboard-target], [data-clipboard-text]\", {\n text: el => (\n el.getAttribute(\"data-clipboard-text\")! ||\n extract(getElement(\n el.getAttribute(\"data-clipboard-target\")!\n ))\n )\n })\n .on(\"success\", ev => subscriber.next(ev))\n })\n .pipe(\n tap(ev => {\n const trigger = ev.trigger as HTMLElement\n trigger.focus()\n }),\n map(() => translation(\"clipboard.copied\"))\n )\n .subscribe(alert$)\n }\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n EMPTY,\n Observable,\n catchError,\n defaultIfEmpty,\n map,\n of,\n tap\n} from \"rxjs\"\n\nimport { configuration } from \"~/_\"\nimport { getElements, requestXML } from \"~/browser\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Sitemap, i.e. a list of URLs\n */\nexport type Sitemap = string[]\n\n/* ----------------------------------------------------------------------------\n * Helper functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Preprocess a list of URLs\n *\n * This function replaces the `site_url` in the sitemap with the actual base\n * URL, to allow instant loading to work in occasions like Netlify previews.\n *\n * @param urls - URLs\n *\n * @returns URL path parts\n */\nfunction preprocess(urls: Sitemap): Sitemap {\n if (urls.length < 2)\n return [\"\"]\n\n /* Take the first two URLs and remove everything after the last slash */\n const [root, next] = [...urls]\n .sort((a, b) => a.length - b.length)\n .map(url => url.replace(/[^/]+$/, \"\"))\n\n /* Compute common prefix */\n let index = 0\n if (root === next)\n index = root.length\n else\n while (root.charCodeAt(index) === next.charCodeAt(index))\n index++\n\n /* Remove common prefix and return in original order */\n return urls.map(url => url.replace(root.slice(0, index), \"\"))\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Fetch the sitemap for the given base URL\n *\n * @param base - Base URL\n *\n * @returns Sitemap observable\n */\nexport function fetchSitemap(base?: URL): Observable {\n const cached = __md_get(\"__sitemap\", sessionStorage, base)\n if (cached) {\n return of(cached)\n } else {\n const config = configuration()\n return requestXML(new URL(\"sitemap.xml\", base || config.base))\n .pipe(\n map(sitemap => preprocess(getElements(\"loc\", sitemap)\n .map(node => node.textContent!)\n )),\n catchError(() => EMPTY), // @todo refactor instant loading\n defaultIfEmpty([]),\n tap(sitemap => __md_set(\"__sitemap\", sitemap, sessionStorage, base))\n )\n }\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n EMPTY,\n NEVER,\n Observable,\n Subject,\n bufferCount,\n catchError,\n concatMap,\n debounceTime,\n distinctUntilChanged,\n distinctUntilKeyChanged,\n filter,\n fromEvent,\n map,\n merge,\n of,\n sample,\n share,\n skip,\n skipUntil,\n switchMap\n} from \"rxjs\"\n\nimport { configuration, feature } from \"~/_\"\nimport {\n Viewport,\n ViewportOffset,\n getElements,\n getOptionalElement,\n request,\n setLocation,\n setLocationHash\n} from \"~/browser\"\nimport { getComponentElement } from \"~/components\"\nimport { h } from \"~/utilities\"\n\nimport { fetchSitemap } from \"../sitemap\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * History state\n */\nexport interface HistoryState {\n url: URL /* State URL */\n offset?: ViewportOffset /* State viewport offset */\n}\n\n/* ----------------------------------------------------------------------------\n * Helper types\n * ------------------------------------------------------------------------- */\n\n/**\n * Setup options\n */\ninterface SetupOptions {\n document$: Subject /* Document subject */\n location$: Subject /* Location subject */\n viewport$: Observable /* Viewport observable */\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Set up instant loading\n *\n * When fetching, theoretically, we could use `responseType: \"document\"`, but\n * since all MkDocs links are relative, we need to make sure that the current\n * location matches the document we just loaded. Otherwise any relative links\n * in the document could use the old location.\n *\n * This is the reason why we need to synchronize history events and the process\n * of fetching the document for navigation changes (except `popstate` events):\n *\n * 1. Fetch document via `XMLHTTPRequest`\n * 2. Set new location via `history.pushState`\n * 3. Parse and emit fetched document\n *\n * For `popstate` events, we must not use `history.pushState`, or the forward\n * history will be irreversibly overwritten. In case the request fails, the\n * location change is dispatched regularly.\n *\n * @param options - Options\n */\nexport function setupInstantLoading(\n { document$, location$, viewport$ }: SetupOptions\n): void {\n const config = configuration()\n if (location.protocol === \"file:\")\n return\n\n /* Disable automatic scroll restoration */\n if (\"scrollRestoration\" in history) {\n history.scrollRestoration = \"manual\"\n\n /* Hack: ensure that reloads restore viewport offset */\n fromEvent(window, \"beforeunload\")\n .subscribe(() => {\n history.scrollRestoration = \"auto\"\n })\n }\n\n /* Hack: ensure absolute favicon link to omit 404s when switching */\n const favicon = getOptionalElement(\"link[rel=icon]\")\n if (typeof favicon !== \"undefined\")\n favicon.href = favicon.href\n\n /* Intercept internal navigation */\n const push$ = fetchSitemap()\n .pipe(\n map(paths => paths.map(path => `${new URL(path, config.base)}`)),\n switchMap(urls => fromEvent(document.body, \"click\")\n .pipe(\n filter(ev => !ev.metaKey && !ev.ctrlKey),\n switchMap(ev => {\n if (ev.target instanceof Element) {\n const el = ev.target.closest(\"a\")\n if (el && !el.target) {\n const url = new URL(el.href)\n\n /* Canonicalize URL */\n url.search = \"\"\n url.hash = \"\"\n\n /* Check if URL should be intercepted */\n if (\n url.pathname !== location.pathname &&\n urls.includes(url.toString())\n ) {\n ev.preventDefault()\n return of({\n url: new URL(el.href)\n })\n }\n }\n }\n return NEVER\n })\n )\n ),\n share()\n )\n\n /* Intercept history back and forward */\n const pop$ = fromEvent(window, \"popstate\")\n .pipe(\n filter(ev => ev.state !== null),\n map(ev => ({\n url: new URL(location.href),\n offset: ev.state\n })),\n share()\n )\n\n /* Emit location change */\n merge(push$, pop$)\n .pipe(\n distinctUntilChanged((a, b) => a.url.href === b.url.href),\n map(({ url }) => url)\n )\n .subscribe(location$)\n\n /* Fetch document via `XMLHTTPRequest` */\n const response$ = location$\n .pipe(\n distinctUntilKeyChanged(\"pathname\"),\n switchMap(url => request(url.href)\n .pipe(\n catchError(() => {\n setLocation(url)\n return NEVER\n })\n )\n ),\n share()\n )\n\n /* Set new location via `history.pushState` */\n push$\n .pipe(\n sample(response$)\n )\n .subscribe(({ url }) => {\n history.pushState({}, \"\", `${url}`)\n })\n\n /* Parse and emit fetched document */\n const dom = new DOMParser()\n response$\n .pipe(\n switchMap(res => res.text()),\n map(res => dom.parseFromString(res, \"text/html\"))\n )\n .subscribe(document$)\n\n /* Replace meta tags and components */\n document$\n .pipe(\n skip(1)\n )\n .subscribe(replacement => {\n for (const selector of [\n\n /* Meta tags */\n \"title\",\n \"link[rel=canonical]\",\n \"meta[name=author]\",\n \"meta[name=description]\",\n\n /* Components */\n \"[data-md-component=announce]\",\n \"[data-md-component=container]\",\n \"[data-md-component=header-topic]\",\n \"[data-md-component=outdated]\",\n \"[data-md-component=logo]\",\n \"[data-md-component=skip]\",\n ...feature(\"navigation.tabs.sticky\")\n ? [\"[data-md-component=tabs]\"]\n : []\n ]) {\n const source = getOptionalElement(selector)\n const target = getOptionalElement(selector, replacement)\n if (\n typeof source !== \"undefined\" &&\n typeof target !== \"undefined\"\n ) {\n source.replaceWith(target)\n }\n }\n })\n\n /* Re-evaluate scripts */\n document$\n .pipe(\n skip(1),\n map(() => getComponentElement(\"container\")),\n switchMap(el => getElements(\"script\", el)),\n concatMap(el => {\n const script = h(\"script\")\n if (el.src) {\n for (const name of el.getAttributeNames())\n script.setAttribute(name, el.getAttribute(name)!)\n el.replaceWith(script)\n\n /* Complete when script is loaded */\n return new Observable(observer => {\n script.onload = () => observer.complete()\n })\n\n /* Complete immediately */\n } else {\n script.textContent = el.textContent\n el.replaceWith(script)\n return EMPTY\n }\n })\n )\n .subscribe()\n\n /* Emit history state change */\n merge(push$, pop$)\n .pipe(\n sample(document$)\n )\n .subscribe(({ url, offset }) => {\n if (url.hash && !offset) {\n setLocationHash(url.hash)\n } else {\n window.scrollTo(0, offset?.y || 0)\n }\n })\n\n /* Debounce update of viewport offset */\n viewport$\n .pipe(\n skipUntil(push$),\n debounceTime(250),\n distinctUntilKeyChanged(\"offset\")\n )\n .subscribe(({ offset }) => {\n history.replaceState(offset, \"\")\n })\n\n /* Set viewport offset from history */\n merge(push$, pop$)\n .pipe(\n bufferCount(2, 1),\n filter(([a, b]) => a.url.pathname === b.url.pathname),\n map(([, state]) => state)\n )\n .subscribe(({ offset }) => {\n window.scrollTo(0, offset?.y || 0)\n })\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport escapeHTML from \"escape-html\"\n\nimport { SearchIndexDocument } from \"../_\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Search document\n */\nexport interface SearchDocument extends SearchIndexDocument {\n parent?: SearchIndexDocument /* Parent article */\n}\n\n/* ------------------------------------------------------------------------- */\n\n/**\n * Search document mapping\n */\nexport type SearchDocumentMap = Map\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Create a search document mapping\n *\n * @param docs - Search index documents\n *\n * @returns Search document map\n */\nexport function setupSearchDocumentMap(\n docs: SearchIndexDocument[]\n): SearchDocumentMap {\n const documents = new Map()\n const parents = new Set()\n for (const doc of docs) {\n const [path, hash] = doc.location.split(\"#\")\n\n /* Extract location, title and tags */\n const location = doc.location\n const title = doc.title\n const tags = doc.tags\n\n /* Escape and cleanup text */\n const text = escapeHTML(doc.text)\n .replace(/\\s+(?=[,.:;!?])/g, \"\")\n .replace(/\\s+/g, \" \")\n\n /* Handle section */\n if (hash) {\n const parent = documents.get(path)!\n\n /* Ignore first section, override article */\n if (!parents.has(parent)) {\n parent.title = doc.title\n parent.text = text\n\n /* Remember that we processed the article */\n parents.add(parent)\n\n /* Add subsequent section */\n } else {\n documents.set(location, {\n location,\n title,\n text,\n parent\n })\n }\n\n /* Add article */\n } else {\n documents.set(location, {\n location,\n title,\n text,\n ...tags && { tags }\n })\n }\n }\n return documents\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport escapeHTML from \"escape-html\"\n\nimport { SearchIndexConfig } from \"../_\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Search highlight function\n *\n * @param value - Value\n *\n * @returns Highlighted value\n */\nexport type SearchHighlightFn = (value: string) => string\n\n/**\n * Search highlight factory function\n *\n * @param query - Query value\n *\n * @returns Search highlight function\n */\nexport type SearchHighlightFactoryFn = (query: string) => SearchHighlightFn\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Create a search highlighter\n *\n * @param config - Search index configuration\n * @param escape - Whether to escape HTML\n *\n * @returns Search highlight factory function\n */\nexport function setupSearchHighlighter(\n config: SearchIndexConfig, escape: boolean\n): SearchHighlightFactoryFn {\n const separator = new RegExp(config.separator, \"img\")\n const highlight = (_: unknown, data: string, term: string) => {\n return `${data}${term}`\n }\n\n /* Return factory function */\n return (query: string) => {\n query = query\n .replace(/[\\s*+\\-:~^]+/g, \" \")\n .trim()\n\n /* Create search term match expression */\n const match = new RegExp(`(^|${config.separator})(${\n query\n .replace(/[|\\\\{}()[\\]^$+*?.-]/g, \"\\\\$&\")\n .replace(separator, \"|\")\n })`, \"img\")\n\n /* Highlight string value */\n return value => (\n escape\n ? escapeHTML(value)\n : value\n )\n .replace(match, highlight)\n .replace(/<\\/mark>(\\s+)]*>/img, \"$1\")\n }\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Search transformation function\n *\n * @param value - Query value\n *\n * @returns Transformed query value\n */\nexport type SearchTransformFn = (value: string) => string\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Default transformation function\n *\n * 1. Search for terms in quotation marks and prepend a `+` modifier to denote\n * that the resulting document must contain all terms, converting the query\n * to an `AND` query (as opposed to the default `OR` behavior). While users\n * may expect terms enclosed in quotation marks to map to span queries, i.e.\n * for which order is important, Lunr.js doesn't support them, so the best\n * we can do is to convert the terms to an `AND` query.\n *\n * 2. Replace control characters which are not located at the beginning of the\n * query or preceded by white space, or are not followed by a non-whitespace\n * character or are at the end of the query string. Furthermore, filter\n * unmatched quotation marks.\n *\n * 3. Trim excess whitespace from left and right.\n *\n * @param query - Query value\n *\n * @returns Transformed query value\n */\nexport function defaultTransform(query: string): string {\n return query\n .split(/\"([^\"]+)\"/g) /* => 1 */\n .map((terms, index) => index & 1\n ? terms.replace(/^\\b|^(?![^\\x00-\\x7F]|$)|\\s+/g, \" +\")\n : terms\n )\n .join(\"\")\n .replace(/\"|(?:^|\\s+)[*+\\-:^~]+(?=\\s+|$)/g, \"\") /* => 2 */\n .trim() /* => 3 */\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A RTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport { SearchIndex, SearchResult } from \"../../_\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Search message type\n */\nexport const enum SearchMessageType {\n SETUP, /* Search index setup */\n READY, /* Search index ready */\n QUERY, /* Search query */\n RESULT /* Search results */\n}\n\n/* ------------------------------------------------------------------------- */\n\n/**\n * Message containing the data necessary to setup the search index\n */\nexport interface SearchSetupMessage {\n type: SearchMessageType.SETUP /* Message type */\n data: SearchIndex /* Message data */\n}\n\n/**\n * Message indicating the search index is ready\n */\nexport interface SearchReadyMessage {\n type: SearchMessageType.READY /* Message type */\n}\n\n/**\n * Message containing a search query\n */\nexport interface SearchQueryMessage {\n type: SearchMessageType.QUERY /* Message type */\n data: string /* Message data */\n}\n\n/**\n * Message containing results for a search query\n */\nexport interface SearchResultMessage {\n type: SearchMessageType.RESULT /* Message type */\n data: SearchResult /* Message data */\n}\n\n/* ------------------------------------------------------------------------- */\n\n/**\n * Message exchanged with the search worker\n */\nexport type SearchMessage =\n | SearchSetupMessage\n | SearchReadyMessage\n | SearchQueryMessage\n | SearchResultMessage\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Type guard for search setup messages\n *\n * @param message - Search worker message\n *\n * @returns Test result\n */\nexport function isSearchSetupMessage(\n message: SearchMessage\n): message is SearchSetupMessage {\n return message.type === SearchMessageType.SETUP\n}\n\n/**\n * Type guard for search ready messages\n *\n * @param message - Search worker message\n *\n * @returns Test result\n */\nexport function isSearchReadyMessage(\n message: SearchMessage\n): message is SearchReadyMessage {\n return message.type === SearchMessageType.READY\n}\n\n/**\n * Type guard for search query messages\n *\n * @param message - Search worker message\n *\n * @returns Test result\n */\nexport function isSearchQueryMessage(\n message: SearchMessage\n): message is SearchQueryMessage {\n return message.type === SearchMessageType.QUERY\n}\n\n/**\n * Type guard for search result messages\n *\n * @param message - Search worker message\n *\n * @returns Test result\n */\nexport function isSearchResultMessage(\n message: SearchMessage\n): message is SearchResultMessage {\n return message.type === SearchMessageType.RESULT\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A RTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n ObservableInput,\n Subject,\n from,\n map,\n share\n} from \"rxjs\"\n\nimport { configuration, feature, translation } from \"~/_\"\nimport { WorkerHandler, watchWorker } from \"~/browser\"\n\nimport { SearchIndex } from \"../../_\"\nimport {\n SearchOptions,\n SearchPipeline\n} from \"../../options\"\nimport {\n SearchMessage,\n SearchMessageType,\n SearchSetupMessage,\n isSearchResultMessage\n} from \"../message\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Search worker\n */\nexport type SearchWorker = WorkerHandler\n\n/* ----------------------------------------------------------------------------\n * Helper functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Set up search index\n *\n * @param data - Search index\n *\n * @returns Search index\n */\nfunction setupSearchIndex({ config, docs }: SearchIndex): SearchIndex {\n\n /* Override default language with value from translation */\n if (config.lang.length === 1 && config.lang[0] === \"en\")\n config.lang = [\n translation(\"search.config.lang\")\n ]\n\n /* Override default separator with value from translation */\n if (config.separator === \"[\\\\s\\\\-]+\")\n config.separator = translation(\"search.config.separator\")\n\n /* Set pipeline from translation */\n const pipeline = translation(\"search.config.pipeline\")\n .split(/\\s*,\\s*/)\n .filter(Boolean) as SearchPipeline\n\n /* Determine search options */\n const options: SearchOptions = {\n pipeline,\n suggestions: feature(\"search.suggest\")\n }\n\n /* Return search index after defaulting */\n return { config, docs, options }\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Set up search worker\n *\n * This function creates a web worker to set up and query the search index,\n * which is done using Lunr.js. The index must be passed as an observable to\n * enable hacks like _localsearch_ via search index embedding as JSON.\n *\n * @param url - Worker URL\n * @param index - Search index observable input\n *\n * @returns Search worker\n */\nexport function setupSearchWorker(\n url: string, index: ObservableInput\n): SearchWorker {\n const config = configuration()\n const worker = new Worker(url)\n\n /* Create communication channels and resolve relative links */\n const tx$ = new Subject()\n const rx$ = watchWorker(worker, { tx$ })\n .pipe(\n map(message => {\n if (isSearchResultMessage(message)) {\n for (const result of message.data.items)\n for (const document of result)\n document.location = `${new URL(document.location, config.base)}`\n }\n return message\n }),\n share()\n )\n\n /* Set up search index */\n from(index)\n .pipe(\n map(data => ({\n type: SearchMessageType.SETUP,\n data: setupSearchIndex(data)\n } as SearchSetupMessage))\n )\n .subscribe(tx$.next.bind(tx$))\n\n /* Return search worker */\n return { tx$, rx$ }\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n EMPTY,\n Subject,\n catchError,\n combineLatest,\n filter,\n fromEvent,\n map,\n of,\n switchMap,\n withLatestFrom\n} from \"rxjs\"\n\nimport { configuration } from \"~/_\"\nimport {\n getElement,\n getLocation,\n requestJSON,\n setLocation\n} from \"~/browser\"\nimport { getComponentElements } from \"~/components\"\nimport {\n Version,\n renderVersionSelector\n} from \"~/templates\"\n\nimport { fetchSitemap } from \"../sitemap\"\n\n/* ----------------------------------------------------------------------------\n * Helper types\n * ------------------------------------------------------------------------- */\n\n/**\n * Setup options\n */\ninterface SetupOptions {\n document$: Subject /* Document subject */\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Set up version selector\n *\n * @param options - Options\n */\nexport function setupVersionSelector(\n { document$ }: SetupOptions\n): void {\n const config = configuration()\n const versions$ = requestJSON(\n new URL(\"../versions.json\", config.base)\n )\n .pipe(\n catchError(() => EMPTY) // @todo refactor instant loading\n )\n\n /* Determine current version */\n const current$ = versions$\n .pipe(\n map(versions => {\n const [, current] = config.base.match(/([^/]+)\\/?$/)!\n return versions.find(({ version, aliases }) => (\n version === current || aliases.includes(current)\n )) || versions[0]\n })\n )\n\n /* Intercept inter-version navigation */\n versions$\n .pipe(\n map(versions => new Map(versions.map(version => [\n `${new URL(`../${version.version}/`, config.base)}`,\n version\n ]))),\n switchMap(urls => fromEvent(document.body, \"click\")\n .pipe(\n filter(ev => !ev.metaKey && !ev.ctrlKey),\n withLatestFrom(current$),\n switchMap(([ev, current]) => {\n if (ev.target instanceof Element) {\n const el = ev.target.closest(\"a\")\n if (el && !el.target && urls.has(el.href)) {\n const url = el.href\n // This is a temporary hack to detect if a version inside the\n // version selector or on another part of the site was clicked.\n // If we're inside the version selector, we definitely want to\n // find the same page, as we might have different deployments\n // due to aliases. However, if we're outside the version\n // selector, we must abort here, because we might otherwise\n // interfere with instant loading. We need to refactor this\n // at some point together with instant loading.\n //\n // See https://github.com/squidfunk/mkdocs-material/issues/4012\n if (!ev.target.closest(\".md-version\")) {\n const version = urls.get(url)!\n if (version === current)\n return EMPTY\n }\n ev.preventDefault()\n return of(url)\n }\n }\n return EMPTY\n }),\n switchMap(url => {\n const { version } = urls.get(url)!\n return fetchSitemap(new URL(url))\n .pipe(\n map(sitemap => {\n const location = getLocation()\n const path = location.href.replace(config.base, \"\")\n return sitemap.includes(path.split(\"#\")[0])\n ? new URL(`../${version}/${path}`, config.base)\n : new URL(url)\n })\n )\n })\n )\n )\n )\n .subscribe(url => setLocation(url))\n\n /* Render version selector and warning */\n combineLatest([versions$, current$])\n .subscribe(([versions, current]) => {\n const topic = getElement(\".md-header__topic\")\n topic.appendChild(renderVersionSelector(versions, current))\n })\n\n /* Integrate outdated version banner with instant loading */\n document$.pipe(switchMap(() => current$))\n .subscribe(current => {\n\n /* Check if version state was already determined */\n let outdated = __md_get(\"__outdated\", sessionStorage)\n if (outdated === null) {\n const latest = config.version?.default || \"latest\"\n outdated = !current.aliases.includes(latest)\n\n /* Persist version state in session storage */\n __md_set(\"__outdated\", outdated, sessionStorage)\n }\n\n /* Unhide outdated version banner */\n if (outdated)\n for (const warning of getComponentElements(\"outdated\"))\n warning.hidden = false\n })\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n Observable,\n Subject,\n combineLatest,\n delay,\n distinctUntilChanged,\n distinctUntilKeyChanged,\n filter,\n finalize,\n fromEvent,\n map,\n merge,\n share,\n shareReplay,\n startWith,\n take,\n takeLast,\n takeUntil,\n tap\n} from \"rxjs\"\n\nimport { translation } from \"~/_\"\nimport {\n getLocation,\n setToggle,\n watchElementFocus,\n watchToggle\n} from \"~/browser\"\nimport {\n SearchMessageType,\n SearchQueryMessage,\n SearchWorker,\n defaultTransform,\n isSearchReadyMessage\n} from \"~/integrations\"\n\nimport { Component } from \"../../_\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Search query\n */\nexport interface SearchQuery {\n value: string /* Query value */\n focus: boolean /* Query focus */\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Watch search query\n *\n * Note that the focus event which triggers re-reading the current query value\n * is delayed by `1ms` so the input's empty state is allowed to propagate.\n *\n * @param el - Search query element\n * @param worker - Search worker\n *\n * @returns Search query observable\n */\nexport function watchSearchQuery(\n el: HTMLInputElement, { rx$ }: SearchWorker\n): Observable {\n const fn = __search?.transform || defaultTransform\n\n /* Immediately show search dialog */\n const { searchParams } = getLocation()\n if (searchParams.has(\"q\"))\n setToggle(\"search\", true)\n\n /* Intercept query parameter (deep link) */\n const param$ = rx$\n .pipe(\n filter(isSearchReadyMessage),\n take(1),\n map(() => searchParams.get(\"q\") || \"\")\n )\n\n /* Remove query parameter when search is closed */\n watchToggle(\"search\")\n .pipe(\n filter(active => !active),\n take(1)\n )\n .subscribe(() => {\n const url = new URL(location.href)\n url.searchParams.delete(\"q\")\n history.replaceState({}, \"\", `${url}`)\n })\n\n /* Set query from parameter */\n param$.subscribe(value => { // TODO: not ideal - find a better way\n if (value) {\n el.value = value\n el.focus()\n }\n })\n\n /* Intercept focus and input events */\n const focus$ = watchElementFocus(el)\n const value$ = merge(\n fromEvent(el, \"keyup\"),\n fromEvent(el, \"focus\").pipe(delay(1)),\n param$\n )\n .pipe(\n map(() => fn(el.value)),\n startWith(\"\"),\n distinctUntilChanged(),\n )\n\n /* Combine into single observable */\n return combineLatest([value$, focus$])\n .pipe(\n map(([value, focus]) => ({ value, focus })),\n shareReplay(1)\n )\n}\n\n/**\n * Mount search query\n *\n * @param el - Search query element\n * @param worker - Search worker\n *\n * @returns Search query component observable\n */\nexport function mountSearchQuery(\n el: HTMLInputElement, { tx$, rx$ }: SearchWorker\n): Observable> {\n const push$ = new Subject()\n const done$ = push$.pipe(takeLast(1))\n\n /* Handle value changes */\n push$\n .pipe(\n distinctUntilKeyChanged(\"value\"),\n map(({ value }): SearchQueryMessage => ({\n type: SearchMessageType.QUERY,\n data: value\n }))\n )\n .subscribe(tx$.next.bind(tx$))\n\n /* Handle focus changes */\n push$\n .pipe(\n distinctUntilKeyChanged(\"focus\")\n )\n .subscribe(({ focus }) => {\n if (focus) {\n setToggle(\"search\", focus)\n el.placeholder = \"\"\n } else {\n el.placeholder = translation(\"search.placeholder\")\n }\n })\n\n /* Handle reset */\n fromEvent(el.form!, \"reset\")\n .pipe(\n takeUntil(done$)\n )\n .subscribe(() => el.focus())\n\n /* Create and return component */\n return watchSearchQuery(el, { tx$, rx$ })\n .pipe(\n tap(state => push$.next(state)),\n finalize(() => push$.complete()),\n map(state => ({ ref: el, ...state })),\n share()\n )\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n Observable,\n Subject,\n bufferCount,\n filter,\n finalize,\n map,\n merge,\n of,\n skipUntil,\n switchMap,\n take,\n tap,\n withLatestFrom,\n zipWith\n} from \"rxjs\"\n\nimport { translation } from \"~/_\"\nimport {\n getElement,\n watchElementBoundary\n} from \"~/browser\"\nimport {\n SearchResult,\n SearchWorker,\n isSearchReadyMessage,\n isSearchResultMessage\n} from \"~/integrations\"\nimport { renderSearchResultItem } from \"~/templates\"\nimport { round } from \"~/utilities\"\n\nimport { Component } from \"../../_\"\nimport { SearchQuery } from \"../query\"\n\n/* ----------------------------------------------------------------------------\n * Helper types\n * ------------------------------------------------------------------------- */\n\n/**\n * Mount options\n */\ninterface MountOptions {\n query$: Observable /* Search query observable */\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Mount search result list\n *\n * This function performs a lazy rendering of the search results, depending on\n * the vertical offset of the search result container.\n *\n * @param el - Search result list element\n * @param worker - Search worker\n * @param options - Options\n *\n * @returns Search result list component observable\n */\nexport function mountSearchResult(\n el: HTMLElement, { rx$ }: SearchWorker, { query$ }: MountOptions\n): Observable> {\n const push$ = new Subject()\n const boundary$ = watchElementBoundary(el.parentElement!)\n .pipe(\n filter(Boolean)\n )\n\n /* Retrieve nested components */\n const meta = getElement(\":scope > :first-child\", el)\n const list = getElement(\":scope > :last-child\", el)\n\n /* Wait until search is ready */\n const ready$ = rx$\n .pipe(\n filter(isSearchReadyMessage),\n take(1)\n )\n\n /* Update search result metadata */\n push$\n .pipe(\n withLatestFrom(query$),\n skipUntil(ready$)\n )\n .subscribe(([{ items }, { value }]) => {\n if (value) {\n switch (items.length) {\n\n /* No results */\n case 0:\n meta.textContent = translation(\"search.result.none\")\n break\n\n /* One result */\n case 1:\n meta.textContent = translation(\"search.result.one\")\n break\n\n /* Multiple result */\n default:\n meta.textContent = translation(\n \"search.result.other\",\n round(items.length)\n )\n }\n } else {\n meta.textContent = translation(\"search.result.placeholder\")\n }\n })\n\n /* Update search result list */\n push$\n .pipe(\n tap(() => list.innerHTML = \"\"),\n switchMap(({ items }) => merge(\n of(...items.slice(0, 10)),\n of(...items.slice(10))\n .pipe(\n bufferCount(4),\n zipWith(boundary$),\n switchMap(([chunk]) => chunk)\n )\n ))\n )\n .subscribe(result => list.appendChild(\n renderSearchResultItem(result)\n ))\n\n /* Filter search result message */\n const result$ = rx$\n .pipe(\n filter(isSearchResultMessage),\n map(({ data }) => data)\n )\n\n /* Create and return component */\n return result$\n .pipe(\n tap(state => push$.next(state)),\n finalize(() => push$.complete()),\n map(state => ({ ref: el, ...state }))\n )\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n Observable,\n Subject,\n finalize,\n fromEvent,\n map,\n tap\n} from \"rxjs\"\n\nimport { getLocation } from \"~/browser\"\n\nimport { Component } from \"../../_\"\nimport { SearchQuery } from \"../query\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Search sharing\n */\nexport interface SearchShare {\n url: URL /* Deep link for sharing */\n}\n\n/* ----------------------------------------------------------------------------\n * Helper types\n * ------------------------------------------------------------------------- */\n\n/**\n * Watch options\n */\ninterface WatchOptions {\n query$: Observable /* Search query observable */\n}\n\n/**\n * Mount options\n */\ninterface MountOptions {\n query$: Observable /* Search query observable */\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Mount search sharing\n *\n * @param _el - Search sharing element\n * @param options - Options\n *\n * @returns Search sharing observable\n */\nexport function watchSearchShare(\n _el: HTMLElement, { query$ }: WatchOptions\n): Observable {\n return query$\n .pipe(\n map(({ value }) => {\n const url = getLocation()\n url.hash = \"\"\n url.searchParams.delete(\"h\")\n url.searchParams.set(\"q\", value)\n return { url }\n })\n )\n}\n\n/**\n * Mount search sharing\n *\n * @param el - Search sharing element\n * @param options - Options\n *\n * @returns Search sharing component observable\n */\nexport function mountSearchShare(\n el: HTMLAnchorElement, options: MountOptions\n): Observable> {\n const push$ = new Subject()\n push$.subscribe(({ url }) => {\n el.setAttribute(\"data-clipboard-text\", el.href)\n el.href = `${url}`\n })\n\n /* Prevent following of link */\n fromEvent(el, \"click\")\n .subscribe(ev => ev.preventDefault())\n\n /* Create and return component */\n return watchSearchShare(el, options)\n .pipe(\n tap(state => push$.next(state)),\n finalize(() => push$.complete()),\n map(state => ({ ref: el, ...state }))\n )\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n Observable,\n Subject,\n asyncScheduler,\n combineLatestWith,\n distinctUntilChanged,\n filter,\n finalize,\n fromEvent,\n map,\n merge,\n observeOn,\n tap\n} from \"rxjs\"\n\nimport { Keyboard } from \"~/browser\"\nimport {\n SearchResult,\n SearchWorker,\n isSearchResultMessage\n} from \"~/integrations\"\n\nimport { Component, getComponentElement } from \"../../_\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Search suggestions\n */\nexport interface SearchSuggest {}\n\n/* ----------------------------------------------------------------------------\n * Helper types\n * ------------------------------------------------------------------------- */\n\n/**\n * Mount options\n */\ninterface MountOptions {\n keyboard$: Observable /* Keyboard observable */\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Mount search suggestions\n *\n * This function will perform a lazy rendering of the search results, depending\n * on the vertical offset of the search result container.\n *\n * @param el - Search result list element\n * @param worker - Search worker\n * @param options - Options\n *\n * @returns Search result list component observable\n */\nexport function mountSearchSuggest(\n el: HTMLElement, { rx$ }: SearchWorker, { keyboard$ }: MountOptions\n): Observable> {\n const push$ = new Subject()\n\n /* Retrieve query component and track all changes */\n const query = getComponentElement(\"search-query\")\n const query$ = merge(\n fromEvent(query, \"keydown\"),\n fromEvent(query, \"focus\")\n )\n .pipe(\n observeOn(asyncScheduler),\n map(() => query.value),\n distinctUntilChanged(),\n )\n\n /* Update search suggestions */\n push$\n .pipe(\n combineLatestWith(query$),\n map(([{ suggestions }, value]) => {\n const words = value.split(/([\\s-]+)/)\n if (suggestions?.length && words[words.length - 1]) {\n const last = suggestions[suggestions.length - 1]\n if (last.startsWith(words[words.length - 1]))\n words[words.length - 1] = last\n } else {\n words.length = 0\n }\n return words\n })\n )\n .subscribe(words => el.innerHTML = words\n .join(\"\")\n .replace(/\\s/g, \" \")\n )\n\n /* Set up search keyboard handlers */\n keyboard$\n .pipe(\n filter(({ mode }) => mode === \"search\")\n )\n .subscribe(key => {\n switch (key.type) {\n\n /* Right arrow: accept current suggestion */\n case \"ArrowRight\":\n if (\n el.innerText.length &&\n query.selectionStart === query.value.length\n )\n query.value = el.innerText\n break\n }\n })\n\n /* Filter search result message */\n const result$ = rx$\n .pipe(\n filter(isSearchResultMessage),\n map(({ data }) => data)\n )\n\n /* Create and return component */\n return result$\n .pipe(\n tap(state => push$.next(state)),\n finalize(() => push$.complete()),\n map(() => ({ ref: el }))\n )\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n NEVER,\n Observable,\n ObservableInput,\n filter,\n merge,\n mergeWith,\n sample,\n take\n} from \"rxjs\"\n\nimport { configuration } from \"~/_\"\nimport {\n Keyboard,\n getActiveElement,\n getElements,\n setToggle\n} from \"~/browser\"\nimport {\n SearchIndex,\n SearchResult,\n isSearchQueryMessage,\n isSearchReadyMessage,\n setupSearchWorker\n} from \"~/integrations\"\n\nimport {\n Component,\n getComponentElement,\n getComponentElements\n} from \"../../_\"\nimport {\n SearchQuery,\n mountSearchQuery\n} from \"../query\"\nimport { mountSearchResult } from \"../result\"\nimport {\n SearchShare,\n mountSearchShare\n} from \"../share\"\nimport {\n SearchSuggest,\n mountSearchSuggest\n} from \"../suggest\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Search\n */\nexport type Search =\n | SearchQuery\n | SearchResult\n | SearchShare\n | SearchSuggest\n\n/* ----------------------------------------------------------------------------\n * Helper types\n * ------------------------------------------------------------------------- */\n\n/**\n * Mount options\n */\ninterface MountOptions {\n index$: ObservableInput /* Search index observable */\n keyboard$: Observable /* Keyboard observable */\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Mount search\n *\n * This function sets up the search functionality, including the underlying\n * web worker and all keyboard bindings.\n *\n * @param el - Search element\n * @param options - Options\n *\n * @returns Search component observable\n */\nexport function mountSearch(\n el: HTMLElement, { index$, keyboard$ }: MountOptions\n): Observable> {\n const config = configuration()\n try {\n const url = __search?.worker || config.search\n const worker = setupSearchWorker(url, index$)\n\n /* Retrieve query and result components */\n const query = getComponentElement(\"search-query\", el)\n const result = getComponentElement(\"search-result\", el)\n\n /* Re-emit query when search is ready */\n const { tx$, rx$ } = worker\n tx$\n .pipe(\n filter(isSearchQueryMessage),\n sample(rx$.pipe(filter(isSearchReadyMessage))),\n take(1)\n )\n .subscribe(tx$.next.bind(tx$))\n\n /* Set up search keyboard handlers */\n keyboard$\n .pipe(\n filter(({ mode }) => mode === \"search\")\n )\n .subscribe(key => {\n const active = getActiveElement()\n switch (key.type) {\n\n /* Enter: go to first (best) result */\n case \"Enter\":\n if (active === query) {\n const anchors = new Map()\n for (const anchor of getElements(\n \":first-child [href]\", result\n )) {\n const article = anchor.firstElementChild!\n anchors.set(anchor, parseFloat(\n article.getAttribute(\"data-md-score\")!\n ))\n }\n\n /* Go to result with highest score, if any */\n if (anchors.size) {\n const [[best]] = [...anchors].sort(([, a], [, b]) => b - a)\n best.click()\n }\n\n /* Otherwise omit form submission */\n key.claim()\n }\n break\n\n /* Escape or Tab: close search */\n case \"Escape\":\n case \"Tab\":\n setToggle(\"search\", false)\n query.blur()\n break\n\n /* Vertical arrows: select previous or next search result */\n case \"ArrowUp\":\n case \"ArrowDown\":\n if (typeof active === \"undefined\") {\n query.focus()\n } else {\n const els = [query, ...getElements(\n \":not(details) > [href], summary, details[open] [href]\",\n result\n )]\n const i = Math.max(0, (\n Math.max(0, els.indexOf(active)) + els.length + (\n key.type === \"ArrowUp\" ? -1 : +1\n )\n ) % els.length)\n els[i].focus()\n }\n\n /* Prevent scrolling of page */\n key.claim()\n break\n\n /* All other keys: hand to search query */\n default:\n if (query !== getActiveElement())\n query.focus()\n }\n })\n\n /* Set up global keyboard handlers */\n keyboard$\n .pipe(\n filter(({ mode }) => mode === \"global\"),\n )\n .subscribe(key => {\n switch (key.type) {\n\n /* Open search and select query */\n case \"f\":\n case \"s\":\n case \"/\":\n query.focus()\n query.select()\n\n /* Prevent scrolling of page */\n key.claim()\n break\n }\n })\n\n /* Create and return component */\n const query$ = mountSearchQuery(query, worker)\n const result$ = mountSearchResult(result, worker, { query$ })\n return merge(query$, result$)\n .pipe(\n mergeWith(\n\n /* Search sharing */\n ...getComponentElements(\"search-share\", el)\n .map(child => mountSearchShare(child, { query$ })),\n\n /* Search suggestions */\n ...getComponentElements(\"search-suggest\", el)\n .map(child => mountSearchSuggest(child, worker, { keyboard$ }))\n )\n )\n\n /* Gracefully handle broken search */\n } catch (err) {\n el.hidden = true\n return NEVER\n }\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n Observable,\n ObservableInput,\n combineLatest,\n filter,\n map,\n startWith\n} from \"rxjs\"\n\nimport { getLocation } from \"~/browser\"\nimport {\n SearchIndex,\n setupSearchHighlighter\n} from \"~/integrations\"\nimport { h } from \"~/utilities\"\n\nimport { Component } from \"../../_\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Search highlighting\n */\nexport interface SearchHighlight {\n nodes: Map /* Map of replacements */\n}\n\n/* ----------------------------------------------------------------------------\n * Helper types\n * ------------------------------------------------------------------------- */\n\n/**\n * Mount options\n */\ninterface MountOptions {\n index$: ObservableInput /* Search index observable */\n location$: Observable /* Location observable */\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Mount search highlighting\n *\n * @param el - Content element\n * @param options - Options\n *\n * @returns Search highlighting component observable\n */\nexport function mountSearchHiglight(\n el: HTMLElement, { index$, location$ }: MountOptions\n): Observable> {\n return combineLatest([\n index$,\n location$\n .pipe(\n startWith(getLocation()),\n filter(url => !!url.searchParams.get(\"h\"))\n )\n ])\n .pipe(\n map(([index, url]) => setupSearchHighlighter(index.config, true)(\n url.searchParams.get(\"h\")!\n )),\n map(fn => {\n const nodes = new Map()\n\n /* Traverse text nodes and collect matches */\n const it = document.createNodeIterator(el, NodeFilter.SHOW_TEXT)\n for (let node = it.nextNode(); node; node = it.nextNode()) {\n if (node.parentElement?.offsetHeight) {\n const original = node.textContent!\n const replaced = fn(original)\n if (replaced.length > original.length)\n nodes.set(node as ChildNode, replaced)\n }\n }\n\n /* Replace original nodes with matches */\n for (const [node, text] of nodes) {\n const { childNodes } = h(\"span\", null, text)\n node.replaceWith(...Array.from(childNodes))\n }\n\n /* Return component */\n return { ref: el, nodes }\n })\n )\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n Observable,\n Subject,\n animationFrameScheduler,\n auditTime,\n combineLatest,\n defer,\n distinctUntilChanged,\n finalize,\n map,\n observeOn,\n take,\n tap,\n withLatestFrom\n} from \"rxjs\"\n\nimport {\n Viewport,\n getElement,\n getElementContainer,\n getElementOffset,\n getElementSize,\n getElements\n} from \"~/browser\"\n\nimport { Component } from \"../_\"\nimport { Header } from \"../header\"\nimport { Main } from \"../main\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Sidebar\n */\nexport interface Sidebar {\n height: number /* Sidebar height */\n locked: boolean /* Sidebar is locked */\n}\n\n/* ----------------------------------------------------------------------------\n * Helper types\n * ------------------------------------------------------------------------- */\n\n/**\n * Watch options\n */\ninterface WatchOptions {\n viewport$: Observable /* Viewport observable */\n main$: Observable
    /* Main area observable */\n}\n\n/**\n * Mount options\n */\ninterface MountOptions {\n viewport$: Observable /* Viewport observable */\n header$: Observable
    /* Header observable */\n main$: Observable
    /* Main area observable */\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Watch sidebar\n *\n * This function returns an observable that computes the visual parameters of\n * the sidebar which depends on the vertical viewport offset, as well as the\n * height of the main area. When the page is scrolled beyond the header, the\n * sidebar is locked and fills the remaining space.\n *\n * @param el - Sidebar element\n * @param options - Options\n *\n * @returns Sidebar observable\n */\nexport function watchSidebar(\n el: HTMLElement, { viewport$, main$ }: WatchOptions\n): Observable {\n const parent = el.parentElement!\n const adjust =\n parent.offsetTop -\n parent.parentElement!.offsetTop\n\n /* Compute the sidebar's available height and if it should be locked */\n return combineLatest([main$, viewport$])\n .pipe(\n map(([{ offset, height }, { offset: { y } }]) => {\n height = height\n + Math.min(adjust, Math.max(0, y - offset))\n - adjust\n return {\n height,\n locked: y >= offset + adjust\n }\n }),\n distinctUntilChanged((a, b) => (\n a.height === b.height &&\n a.locked === b.locked\n ))\n )\n}\n\n/**\n * Mount sidebar\n *\n * This function doesn't set the height of the actual sidebar, but of its first\n * child \u2013 the `.md-sidebar__scrollwrap` element in order to mitigiate jittery\n * sidebars when the footer is scrolled into view. At some point we switched\n * from `absolute` / `fixed` positioning to `sticky` positioning, significantly\n * reducing jitter in some browsers (respectively Firefox and Safari) when\n * scrolling from the top. However, top-aligned sticky positioning means that\n * the sidebar snaps to the bottom when the end of the container is reached.\n * This is what leads to the mentioned jitter, as the sidebar's height may be\n * updated too slowly.\n *\n * This behaviour can be mitigiated by setting the height of the sidebar to `0`\n * while preserving the padding, and the height on its first element.\n *\n * @param el - Sidebar element\n * @param options - Options\n *\n * @returns Sidebar component observable\n */\nexport function mountSidebar(\n el: HTMLElement, { header$, ...options }: MountOptions\n): Observable> {\n const inner = getElement(\".md-sidebar__scrollwrap\", el)\n const { y } = getElementOffset(inner)\n return defer(() => {\n const push$ = new Subject()\n push$\n .pipe(\n auditTime(0, animationFrameScheduler),\n withLatestFrom(header$)\n )\n .subscribe({\n\n /* Handle emission */\n next([{ height }, { height: offset }]) {\n inner.style.height = `${height - 2 * y}px`\n el.style.top = `${offset}px`\n },\n\n /* Handle complete */\n complete() {\n inner.style.height = \"\"\n el.style.top = \"\"\n }\n })\n\n /* Bring active item into view on initial load */\n push$\n .pipe(\n observeOn(animationFrameScheduler),\n take(1)\n )\n .subscribe(() => {\n for (const item of getElements(\".md-nav__link--active[href]\", el)) {\n const container = getElementContainer(item)\n if (typeof container !== \"undefined\") {\n const offset = item.offsetTop - container.offsetTop\n const { height } = getElementSize(container)\n container.scrollTo({\n top: offset - height / 2\n })\n }\n }\n })\n\n /* Create and return component */\n return watchSidebar(el, options)\n .pipe(\n tap(state => push$.next(state)),\n finalize(() => push$.complete()),\n map(state => ({ ref: el, ...state }))\n )\n })\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport { Repo, User } from \"github-types\"\nimport {\n EMPTY,\n Observable,\n catchError,\n defaultIfEmpty,\n map,\n zip\n} from \"rxjs\"\n\nimport { requestJSON } from \"~/browser\"\n\nimport { SourceFacts } from \"../_\"\n\n/* ----------------------------------------------------------------------------\n * Helper types\n * ------------------------------------------------------------------------- */\n\n/**\n * GitHub release (partial)\n */\ninterface Release {\n tag_name: string /* Tag name */\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Fetch GitHub repository facts\n *\n * @param user - GitHub user or organization\n * @param repo - GitHub repository\n *\n * @returns Repository facts observable\n */\nexport function fetchSourceFactsFromGitHub(\n user: string, repo?: string\n): Observable {\n if (typeof repo !== \"undefined\") {\n const url = `https://api.github.com/repos/${user}/${repo}`\n return zip(\n\n /* Fetch version */\n requestJSON(`${url}/releases/latest`)\n .pipe(\n catchError(() => EMPTY), // @todo refactor instant loading\n map(release => ({\n version: release.tag_name\n })),\n defaultIfEmpty({})\n ),\n\n /* Fetch stars and forks */\n requestJSON(url)\n .pipe(\n catchError(() => EMPTY), // @todo refactor instant loading\n map(info => ({\n stars: info.stargazers_count,\n forks: info.forks_count\n })),\n defaultIfEmpty({})\n )\n )\n .pipe(\n map(([release, info]) => ({ ...release, ...info }))\n )\n\n /* User or organization */\n } else {\n const url = `https://api.github.com/users/${user}`\n return requestJSON(url)\n .pipe(\n map(info => ({\n repositories: info.public_repos\n })),\n defaultIfEmpty({})\n )\n }\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport { ProjectSchema } from \"gitlab\"\nimport {\n EMPTY,\n Observable,\n catchError,\n defaultIfEmpty,\n map\n} from \"rxjs\"\n\nimport { requestJSON } from \"~/browser\"\n\nimport { SourceFacts } from \"../_\"\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Fetch GitLab repository facts\n *\n * @param base - GitLab base\n * @param project - GitLab project\n *\n * @returns Repository facts observable\n */\nexport function fetchSourceFactsFromGitLab(\n base: string, project: string\n): Observable {\n const url = `https://${base}/api/v4/projects/${encodeURIComponent(project)}`\n return requestJSON(url)\n .pipe(\n catchError(() => EMPTY), // @todo refactor instant loading\n map(({ star_count, forks_count }) => ({\n stars: star_count,\n forks: forks_count\n })),\n defaultIfEmpty({})\n )\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport { EMPTY, Observable } from \"rxjs\"\n\nimport { fetchSourceFactsFromGitHub } from \"../github\"\nimport { fetchSourceFactsFromGitLab } from \"../gitlab\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Repository facts for repositories\n */\nexport interface RepositoryFacts {\n stars?: number /* Number of stars */\n forks?: number /* Number of forks */\n version?: string /* Latest version */\n}\n\n/**\n * Repository facts for organizations\n */\nexport interface OrganizationFacts {\n repositories?: number /* Number of repositories */\n}\n\n/* ------------------------------------------------------------------------- */\n\n/**\n * Repository facts\n */\nexport type SourceFacts =\n | RepositoryFacts\n | OrganizationFacts\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Fetch repository facts\n *\n * @param url - Repository URL\n *\n * @returns Repository facts observable\n */\nexport function fetchSourceFacts(\n url: string\n): Observable {\n\n /* Try to match GitHub repository */\n let match = url.match(/^.+github\\.com\\/([^/]+)\\/?([^/]+)?/i)\n if (match) {\n const [, user, repo] = match\n return fetchSourceFactsFromGitHub(user, repo)\n }\n\n /* Try to match GitLab repository */\n match = url.match(/^.+?([^/]*gitlab[^/]+)\\/(.+?)\\/?$/i)\n if (match) {\n const [, base, slug] = match\n return fetchSourceFactsFromGitLab(base, slug)\n }\n\n /* Fallback */\n return EMPTY\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n EMPTY,\n Observable,\n Subject,\n catchError,\n defer,\n filter,\n finalize,\n map,\n of,\n shareReplay,\n tap\n} from \"rxjs\"\n\nimport { getElement } from \"~/browser\"\nimport { ConsentDefaults } from \"~/components/consent\"\nimport { renderSourceFacts } from \"~/templates\"\n\nimport {\n Component,\n getComponentElements\n} from \"../../_\"\nimport {\n SourceFacts,\n fetchSourceFacts\n} from \"../facts\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Repository information\n */\nexport interface Source {\n facts: SourceFacts /* Repository facts */\n}\n\n/* ----------------------------------------------------------------------------\n * Data\n * ------------------------------------------------------------------------- */\n\n/**\n * Repository information observable\n */\nlet fetch$: Observable\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Watch repository information\n *\n * This function tries to read the repository facts from session storage, and\n * if unsuccessful, fetches them from the underlying provider.\n *\n * @param el - Repository information element\n *\n * @returns Repository information observable\n */\nexport function watchSource(\n el: HTMLAnchorElement\n): Observable {\n return fetch$ ||= defer(() => {\n const cached = __md_get(\"__source\", sessionStorage)\n if (cached) {\n return of(cached)\n } else {\n\n /* Check if consent is configured and was given */\n const els = getComponentElements(\"consent\")\n if (els.length) {\n const consent = __md_get(\"__consent\")\n if (!(consent && consent.github))\n return EMPTY\n }\n\n /* Fetch repository facts */\n return fetchSourceFacts(el.href)\n .pipe(\n tap(facts => __md_set(\"__source\", facts, sessionStorage))\n )\n }\n })\n .pipe(\n catchError(() => EMPTY),\n filter(facts => Object.keys(facts).length > 0),\n map(facts => ({ facts })),\n shareReplay(1)\n )\n}\n\n/**\n * Mount repository information\n *\n * @param el - Repository information element\n *\n * @returns Repository information component observable\n */\nexport function mountSource(\n el: HTMLAnchorElement\n): Observable> {\n const inner = getElement(\":scope > :last-child\", el)\n return defer(() => {\n const push$ = new Subject()\n push$.subscribe(({ facts }) => {\n inner.appendChild(renderSourceFacts(facts))\n inner.classList.add(\"md-source__repository--active\")\n })\n\n /* Create and return component */\n return watchSource(el)\n .pipe(\n tap(state => push$.next(state)),\n finalize(() => push$.complete()),\n map(state => ({ ref: el, ...state }))\n )\n })\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n Observable,\n Subject,\n defer,\n distinctUntilKeyChanged,\n finalize,\n map,\n of,\n switchMap,\n tap\n} from \"rxjs\"\n\nimport { feature } from \"~/_\"\nimport {\n Viewport,\n watchElementSize,\n watchViewportAt\n} from \"~/browser\"\n\nimport { Component } from \"../_\"\nimport { Header } from \"../header\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Navigation tabs\n */\nexport interface Tabs {\n hidden: boolean /* Navigation tabs are hidden */\n}\n\n/* ----------------------------------------------------------------------------\n * Helper types\n * ------------------------------------------------------------------------- */\n\n/**\n * Watch options\n */\ninterface WatchOptions {\n viewport$: Observable /* Viewport observable */\n header$: Observable
    /* Header observable */\n}\n\n/**\n * Mount options\n */\ninterface MountOptions {\n viewport$: Observable /* Viewport observable */\n header$: Observable
    /* Header observable */\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Watch navigation tabs\n *\n * @param el - Navigation tabs element\n * @param options - Options\n *\n * @returns Navigation tabs observable\n */\nexport function watchTabs(\n el: HTMLElement, { viewport$, header$ }: WatchOptions\n): Observable {\n return watchElementSize(document.body)\n .pipe(\n switchMap(() => watchViewportAt(el, { header$, viewport$ })),\n map(({ offset: { y } }) => {\n return {\n hidden: y >= 10\n }\n }),\n distinctUntilKeyChanged(\"hidden\")\n )\n}\n\n/**\n * Mount navigation tabs\n *\n * This function hides the navigation tabs when scrolling past the threshold\n * and makes them reappear in a nice CSS animation when scrolling back up.\n *\n * @param el - Navigation tabs element\n * @param options - Options\n *\n * @returns Navigation tabs component observable\n */\nexport function mountTabs(\n el: HTMLElement, options: MountOptions\n): Observable> {\n return defer(() => {\n const push$ = new Subject()\n push$.subscribe({\n\n /* Handle emission */\n next({ hidden }) {\n el.hidden = hidden\n },\n\n /* Handle complete */\n complete() {\n el.hidden = false\n }\n })\n\n /* Create and return component */\n return (\n feature(\"navigation.tabs.sticky\")\n ? of({ hidden: false })\n : watchTabs(el, options)\n )\n .pipe(\n tap(state => push$.next(state)),\n finalize(() => push$.complete()),\n map(state => ({ ref: el, ...state }))\n )\n })\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n Observable,\n Subject,\n bufferCount,\n combineLatestWith,\n debounceTime,\n defer,\n distinctUntilChanged,\n distinctUntilKeyChanged,\n filter,\n finalize,\n map,\n merge,\n of,\n repeat,\n scan,\n share,\n skip,\n startWith,\n switchMap,\n takeLast,\n takeUntil,\n tap,\n withLatestFrom\n} from \"rxjs\"\n\nimport { feature } from \"~/_\"\nimport {\n Viewport,\n getElement,\n getElementContainer,\n getElementSize,\n getElements,\n getLocation,\n getOptionalElement,\n watchElementSize\n} from \"~/browser\"\n\nimport {\n Component,\n getComponentElement\n} from \"../_\"\nimport { Header } from \"../header\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Table of contents\n */\nexport interface TableOfContents {\n prev: HTMLAnchorElement[][] /* Anchors (previous) */\n next: HTMLAnchorElement[][] /* Anchors (next) */\n}\n\n/* ----------------------------------------------------------------------------\n * Helper types\n * ------------------------------------------------------------------------- */\n\n/**\n * Watch options\n */\ninterface WatchOptions {\n viewport$: Observable /* Viewport observable */\n header$: Observable
    /* Header observable */\n}\n\n/**\n * Mount options\n */\ninterface MountOptions {\n viewport$: Observable /* Viewport observable */\n header$: Observable
    /* Header observable */\n target$: Observable /* Location target observable */\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Watch table of contents\n *\n * This is effectively a scroll spy implementation which will account for the\n * fixed header and automatically re-calculate anchor offsets when the viewport\n * is resized. The returned observable will only emit if the table of contents\n * needs to be repainted.\n *\n * This implementation tracks an anchor element's entire path starting from its\n * level up to the top-most anchor element, e.g. `[h3, h2, h1]`. Although the\n * Material theme currently doesn't make use of this information, it enables\n * the styling of the entire hierarchy through customization.\n *\n * Note that the current anchor is the last item of the `prev` anchor list.\n *\n * @param el - Table of contents element\n * @param options - Options\n *\n * @returns Table of contents observable\n */\nexport function watchTableOfContents(\n el: HTMLElement, { viewport$, header$ }: WatchOptions\n): Observable {\n const table = new Map()\n\n /* Compute anchor-to-target mapping */\n const anchors = getElements(\"[href^=\\\\#]\", el)\n for (const anchor of anchors) {\n const id = decodeURIComponent(anchor.hash.substring(1))\n const target = getOptionalElement(`[id=\"${id}\"]`)\n if (typeof target !== \"undefined\")\n table.set(anchor, target)\n }\n\n /* Compute necessary adjustment for header */\n const adjust$ = header$\n .pipe(\n distinctUntilKeyChanged(\"height\"),\n map(({ height }) => {\n const main = getComponentElement(\"main\")\n const grid = getElement(\":scope > :first-child\", main)\n return height + 0.8 * (\n grid.offsetTop -\n main.offsetTop\n )\n }),\n share()\n )\n\n /* Compute partition of previous and next anchors */\n const partition$ = watchElementSize(document.body)\n .pipe(\n distinctUntilKeyChanged(\"height\"),\n\n /* Build index to map anchor paths to vertical offsets */\n switchMap(body => defer(() => {\n let path: HTMLAnchorElement[] = []\n return of([...table].reduce((index, [anchor, target]) => {\n while (path.length) {\n const last = table.get(path[path.length - 1])!\n if (last.tagName >= target.tagName) {\n path.pop()\n } else {\n break\n }\n }\n\n /* If the current anchor is hidden, continue with its parent */\n let offset = target.offsetTop\n while (!offset && target.parentElement) {\n target = target.parentElement\n offset = target.offsetTop\n }\n\n /* Map reversed anchor path to vertical offset */\n return index.set(\n [...path = [...path, anchor]].reverse(),\n offset\n )\n }, new Map()))\n })\n .pipe(\n\n /* Sort index by vertical offset (see https://bit.ly/30z6QSO) */\n map(index => new Map([...index].sort(([, a], [, b]) => a - b))),\n combineLatestWith(adjust$),\n\n /* Re-compute partition when viewport offset changes */\n switchMap(([index, adjust]) => viewport$\n .pipe(\n scan(([prev, next], { offset: { y }, size }) => {\n const last = y + size.height >= Math.floor(body.height)\n\n /* Look forward */\n while (next.length) {\n const [, offset] = next[0]\n if (offset - adjust < y || last) {\n prev = [...prev, next.shift()!]\n } else {\n break\n }\n }\n\n /* Look backward */\n while (prev.length) {\n const [, offset] = prev[prev.length - 1]\n if (offset - adjust >= y && !last) {\n next = [prev.pop()!, ...next]\n } else {\n break\n }\n }\n\n /* Return partition */\n return [prev, next]\n }, [[], [...index]]),\n distinctUntilChanged((a, b) => (\n a[0] === b[0] &&\n a[1] === b[1]\n ))\n )\n )\n )\n )\n )\n\n /* Compute and return anchor list migrations */\n return partition$\n .pipe(\n map(([prev, next]) => ({\n prev: prev.map(([path]) => path),\n next: next.map(([path]) => path)\n })),\n\n /* Extract anchor list migrations */\n startWith({ prev: [], next: [] }),\n bufferCount(2, 1),\n map(([a, b]) => {\n\n /* Moving down */\n if (a.prev.length < b.prev.length) {\n return {\n prev: b.prev.slice(Math.max(0, a.prev.length - 1), b.prev.length),\n next: []\n }\n\n /* Moving up */\n } else {\n return {\n prev: b.prev.slice(-1),\n next: b.next.slice(0, b.next.length - a.next.length)\n }\n }\n })\n )\n}\n\n/* ------------------------------------------------------------------------- */\n\n/**\n * Mount table of contents\n *\n * @param el - Table of contents element\n * @param options - Options\n *\n * @returns Table of contents component observable\n */\nexport function mountTableOfContents(\n el: HTMLElement, { viewport$, header$, target$ }: MountOptions\n): Observable> {\n return defer(() => {\n const push$ = new Subject()\n const done$ = push$.pipe(takeLast(1))\n push$.subscribe(({ prev, next }) => {\n\n /* Look forward */\n for (const [anchor] of next) {\n anchor.classList.remove(\"md-nav__link--passed\")\n anchor.classList.remove(\"md-nav__link--active\")\n }\n\n /* Look backward */\n for (const [index, [anchor]] of prev.entries()) {\n anchor.classList.add(\"md-nav__link--passed\")\n anchor.classList.toggle(\n \"md-nav__link--active\",\n index === prev.length - 1\n )\n }\n })\n\n /* Set up following, if enabled */\n if (feature(\"toc.follow\")) {\n\n /* Toggle smooth scrolling only for anchor clicks */\n const smooth$ = merge(\n viewport$.pipe(debounceTime(1), map(() => undefined)),\n viewport$.pipe(debounceTime(250), map(() => \"smooth\" as const))\n )\n\n /* Bring active anchor into view */\n push$\n .pipe(\n filter(({ prev }) => prev.length > 0),\n withLatestFrom(smooth$)\n )\n .subscribe(([{ prev }, behavior]) => {\n const [anchor] = prev[prev.length - 1]\n if (anchor.offsetHeight) {\n\n /* Retrieve overflowing container and scroll */\n const container = getElementContainer(anchor)\n if (typeof container !== \"undefined\") {\n const offset = anchor.offsetTop - container.offsetTop\n const { height } = getElementSize(container)\n container.scrollTo({\n top: offset - height / 2,\n behavior\n })\n }\n }\n })\n }\n\n /* Set up anchor tracking, if enabled */\n if (feature(\"navigation.tracking\"))\n viewport$\n .pipe(\n takeUntil(done$),\n distinctUntilKeyChanged(\"offset\"),\n debounceTime(250),\n skip(1),\n takeUntil(target$.pipe(skip(1))),\n repeat({ delay: 250 }),\n withLatestFrom(push$)\n )\n .subscribe(([, { prev }]) => {\n const url = getLocation()\n\n /* Set hash fragment to active anchor */\n const anchor = prev[prev.length - 1]\n if (anchor && anchor.length) {\n const [active] = anchor\n const { hash } = new URL(active.href)\n if (url.hash !== hash) {\n url.hash = hash\n history.replaceState({}, \"\", `${url}`)\n }\n\n /* Reset anchor when at the top */\n } else {\n url.hash = \"\"\n history.replaceState({}, \"\", `${url}`)\n }\n })\n\n /* Create and return component */\n return watchTableOfContents(el, { viewport$, header$ })\n .pipe(\n tap(state => push$.next(state)),\n finalize(() => push$.complete()),\n map(state => ({ ref: el, ...state }))\n )\n })\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n Observable,\n Subject,\n bufferCount,\n combineLatest,\n distinctUntilChanged,\n distinctUntilKeyChanged,\n endWith,\n finalize,\n map,\n repeat,\n skip,\n takeLast,\n takeUntil,\n tap\n} from \"rxjs\"\n\nimport { Viewport } from \"~/browser\"\n\nimport { Component } from \"../_\"\nimport { Header } from \"../header\"\nimport { Main } from \"../main\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Back-to-top button\n */\nexport interface BackToTop {\n hidden: boolean /* Back-to-top button is hidden */\n}\n\n/* ----------------------------------------------------------------------------\n * Helper types\n * ------------------------------------------------------------------------- */\n\n/**\n * Watch options\n */\ninterface WatchOptions {\n viewport$: Observable /* Viewport observable */\n main$: Observable
    /* Main area observable */\n target$: Observable /* Location target observable */\n}\n\n/**\n * Mount options\n */\ninterface MountOptions {\n viewport$: Observable /* Viewport observable */\n header$: Observable
    /* Header observable */\n main$: Observable
    /* Main area observable */\n target$: Observable /* Location target observable */\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Watch back-to-top\n *\n * @param _el - Back-to-top element\n * @param options - Options\n *\n * @returns Back-to-top observable\n */\nexport function watchBackToTop(\n _el: HTMLElement, { viewport$, main$, target$ }: WatchOptions\n): Observable {\n\n /* Compute direction */\n const direction$ = viewport$\n .pipe(\n map(({ offset: { y } }) => y),\n bufferCount(2, 1),\n map(([a, b]) => a > b && b > 0),\n distinctUntilChanged()\n )\n\n /* Compute whether main area is active */\n const active$ = main$\n .pipe(\n map(({ active }) => active)\n )\n\n /* Compute threshold for hiding */\n return combineLatest([active$, direction$])\n .pipe(\n map(([active, direction]) => !(active && direction)),\n distinctUntilChanged(),\n takeUntil(target$.pipe(skip(1))),\n endWith(true),\n repeat({ delay: 250 }),\n map(hidden => ({ hidden }))\n )\n}\n\n/* ------------------------------------------------------------------------- */\n\n/**\n * Mount back-to-top\n *\n * @param el - Back-to-top element\n * @param options - Options\n *\n * @returns Back-to-top component observable\n */\nexport function mountBackToTop(\n el: HTMLElement, { viewport$, header$, main$, target$ }: MountOptions\n): Observable> {\n const push$ = new Subject()\n const done$ = push$.pipe(takeLast(1))\n push$.subscribe({\n\n /* Handle emission */\n next({ hidden }) {\n el.hidden = hidden\n if (hidden) {\n el.setAttribute(\"tabindex\", \"-1\")\n el.blur()\n } else {\n el.removeAttribute(\"tabindex\")\n }\n },\n\n /* Handle complete */\n complete() {\n el.style.top = \"\"\n el.hidden = true\n el.removeAttribute(\"tabindex\")\n }\n })\n\n /* Watch header height */\n header$\n .pipe(\n takeUntil(done$),\n distinctUntilKeyChanged(\"height\")\n )\n .subscribe(({ height }) => {\n el.style.top = `${height + 16}px`\n })\n\n /* Create and return component */\n return watchBackToTop(el, { viewport$, main$, target$ })\n .pipe(\n tap(state => push$.next(state)),\n finalize(() => push$.complete()),\n map(state => ({ ref: el, ...state }))\n )\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n Observable,\n fromEvent,\n map,\n mergeMap,\n switchMap,\n takeWhile,\n tap,\n withLatestFrom\n} from \"rxjs\"\n\nimport { getElements } from \"~/browser\"\n\n/* ----------------------------------------------------------------------------\n * Helper types\n * ------------------------------------------------------------------------- */\n\n/**\n * Patch options\n */\ninterface PatchOptions {\n document$: Observable /* Document observable */\n tablet$: Observable /* Media tablet observable */\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Patch indeterminate checkboxes\n *\n * This function replaces the indeterminate \"pseudo state\" with the actual\n * indeterminate state, which is used to keep navigation always expanded.\n *\n * @param options - Options\n */\nexport function patchIndeterminate(\n { document$, tablet$ }: PatchOptions\n): void {\n document$\n .pipe(\n switchMap(() => getElements(\n // @todo `data-md-state` is deprecated and removed in v9\n \".md-toggle--indeterminate, [data-md-state=indeterminate]\"\n )),\n tap(el => {\n el.indeterminate = true\n el.checked = false\n }),\n mergeMap(el => fromEvent(el, \"change\")\n .pipe(\n takeWhile(() => el.classList.contains(\"md-toggle--indeterminate\")),\n map(() => el)\n )\n ),\n withLatestFrom(tablet$)\n )\n .subscribe(([el, tablet]) => {\n el.classList.remove(\"md-toggle--indeterminate\")\n if (tablet)\n el.checked = false\n })\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n Observable,\n filter,\n fromEvent,\n map,\n mergeMap,\n switchMap,\n tap\n} from \"rxjs\"\n\nimport { getElements } from \"~/browser\"\n\n/* ----------------------------------------------------------------------------\n * Helper types\n * ------------------------------------------------------------------------- */\n\n/**\n * Patch options\n */\ninterface PatchOptions {\n document$: Observable /* Document observable */\n}\n\n/* ----------------------------------------------------------------------------\n * Helper functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Check whether the given device is an Apple device\n *\n * @returns Test result\n */\nfunction isAppleDevice(): boolean {\n return /(iPad|iPhone|iPod)/.test(navigator.userAgent)\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Patch all elements with `data-md-scrollfix` attributes\n *\n * This is a year-old patch which ensures that overflow scrolling works at the\n * top and bottom of containers on iOS by ensuring a `1px` scroll offset upon\n * the start of a touch event.\n *\n * @see https://bit.ly/2SCtAOO - Original source\n *\n * @param options - Options\n */\nexport function patchScrollfix(\n { document$ }: PatchOptions\n): void {\n document$\n .pipe(\n switchMap(() => getElements(\"[data-md-scrollfix]\")),\n tap(el => el.removeAttribute(\"data-md-scrollfix\")),\n filter(isAppleDevice),\n mergeMap(el => fromEvent(el, \"touchstart\")\n .pipe(\n map(() => el)\n )\n )\n )\n .subscribe(el => {\n const top = el.scrollTop\n\n /* We're at the top of the container */\n if (top === 0) {\n el.scrollTop = 1\n\n /* We're at the bottom of the container */\n } else if (top + el.offsetHeight === el.scrollHeight) {\n el.scrollTop = top - 1\n }\n })\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n Observable,\n combineLatest,\n delay,\n map,\n of,\n switchMap,\n withLatestFrom\n} from \"rxjs\"\n\nimport {\n Viewport,\n watchToggle\n} from \"~/browser\"\n\n/* ----------------------------------------------------------------------------\n * Helper types\n * ------------------------------------------------------------------------- */\n\n/**\n * Patch options\n */\ninterface PatchOptions {\n viewport$: Observable /* Viewport observable */\n tablet$: Observable /* Media tablet observable */\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Patch the document body to lock when search is open\n *\n * For mobile and tablet viewports, the search is rendered full screen, which\n * leads to scroll leaking when at the top or bottom of the search result. This\n * function locks the body when the search is in full screen mode, and restores\n * the scroll position when leaving.\n *\n * @param options - Options\n */\nexport function patchScrolllock(\n { viewport$, tablet$ }: PatchOptions\n): void {\n combineLatest([watchToggle(\"search\"), tablet$])\n .pipe(\n map(([active, tablet]) => active && !tablet),\n switchMap(active => of(active)\n .pipe(\n delay(active ? 400 : 100)\n )\n ),\n withLatestFrom(viewport$)\n )\n .subscribe(([active, { offset: { y }}]) => {\n if (active) {\n document.body.setAttribute(\"data-md-scrolllock\", \"\")\n document.body.style.top = `-${y}px`\n } else {\n const value = -1 * parseInt(document.body.style.top, 10)\n document.body.removeAttribute(\"data-md-scrolllock\")\n document.body.style.top = \"\"\n if (value)\n window.scrollTo(0, value)\n }\n })\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\n/* ----------------------------------------------------------------------------\n * Polyfills\n * ------------------------------------------------------------------------- */\n\n/* Polyfill `Object.entries` */\nif (!Object.entries)\n Object.entries = function (obj: object) {\n const data: [string, string][] = []\n for (const key of Object.keys(obj))\n // @ts-expect-error - ignore property access warning\n data.push([key, obj[key]])\n\n /* Return entries */\n return data\n }\n\n/* Polyfill `Object.values` */\nif (!Object.values)\n Object.values = function (obj: object) {\n const data: string[] = []\n for (const key of Object.keys(obj))\n // @ts-expect-error - ignore property access warning\n 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IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n NEVER,\n ReplaySubject,\n delay,\n distinctUntilChanged,\n filter,\n finalize,\n fromEvent,\n interval,\n merge,\n mergeMap,\n of,\n repeat,\n switchMap,\n take,\n takeUntil,\n tap,\n withLatestFrom\n} from \"rxjs\"\n\n/* ----------------------------------------------------------------------------\n * Script\n * ------------------------------------------------------------------------- */\n\n/* Append container for instances */\nconst container = document.createElement(\"div\")\ndocument.body.appendChild(container)\n\n/* Append button next to palette toggle */\nconst header = document.querySelector(\".md-header__option\")\nif (header) {\n const button = document.createElement(\"button\")\n button.className = \"md-header__button md-icon \u1D34\u2092\u1D34\u2092\u1D34\u2092__button\"\n if (header.parentElement)\n header.parentElement.insertBefore(button, header)\n\n /* Toggle animation */\n const on$ = new ReplaySubject(1)\n on$\n .pipe(\n distinctUntilChanged()\n )\n .subscribe(on => {\n sessionStorage.setItem(\"\u1D34\u2092\u1D34\u2092\u1D34\u2092\", `${on}`)\n button.hidden = !on\n })\n\n /* Load state from session storage */\n on$.next(JSON.parse(sessionStorage.getItem(\"\u1D34\u2092\u1D34\u2092\u1D34\u2092\") || \"true\"))\n fromEvent(button, \"click\")\n .pipe(\n withLatestFrom(on$)\n )\n .subscribe(([, on]) => on$.next(!on))\n\n /* Generate instances */\n interval(250)\n .pipe(\n takeUntil(on$.pipe(filter(on => !on))),\n take(75),\n repeat({ delay: () => on$.pipe(filter(on => on)) }),\n mergeMap(() => {\n const instance = document.createElement(\"div\")\n instance.className = \"\u1D34\u2092\u1D34\u2092\u1D34\u2092\"\n instance.ariaHidden = \"true\"\n 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nu når og også om op os over på selv sig sin sine sit skal skulle som sådan thi til ud under var vi vil ville vor være været".split(" ")),e.Pipeline.registerFunction(e.da.stopWordFilter,"stopWordFilter-da")}}); \ No newline at end of file diff --git a/pr-preview/pr-10/assets/javascripts/lunr/min/lunr.de.min.js b/pr-preview/pr-10/assets/javascripts/lunr/min/lunr.de.min.js deleted file mode 100644 index f3b5c10..0000000 --- a/pr-preview/pr-10/assets/javascripts/lunr/min/lunr.de.min.js +++ /dev/null @@ -1,18 +0,0 @@ -/*! - * Lunr languages, `German` language - * https://github.com/MihaiValentin/lunr-languages - * - * Copyright 2014, Mihai Valentin - * http://www.mozilla.org/MPL/ - */ -/*! - * based on - * Snowball JavaScript Library v0.3 - * http://code.google.com/p/urim/ - * http://snowball.tartarus.org/ - * - * Copyright 2010, Oleg Mazko - * http://www.mozilla.org/MPL/ - */ - -!function(e,r){"function"==typeof define&&define.amd?define(r):"object"==typeof 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andere anderem anderen anderer anderes anderm andern anderr anders auch auf aus bei bin bis bist da damit dann das dasselbe dazu daß dein deine deinem deinen deiner deines dem demselben den denn denselben der derer derselbe derselben des desselben dessen dich die dies diese dieselbe dieselben diesem diesen dieser dieses dir doch dort du durch ein eine einem einen einer eines einig einige einigem einigen einiger einiges einmal er es etwas euch euer eure eurem euren eurer eures für gegen gewesen hab habe haben hat hatte hatten hier hin hinter ich ihm ihn ihnen ihr ihre ihrem ihren ihrer ihres im in indem ins ist jede jedem jeden jeder jedes jene jenem jenen jener jenes jetzt kann kein keine keinem keinen keiner keines können könnte machen man manche manchem manchen mancher manches mein meine meinem meinen meiner meines mich mir mit muss musste nach nicht nichts noch nun nur ob oder ohne sehr sein seine seinem seinen seiner seines selbst sich sie sind so solche solchem solchen solcher solches soll sollte sondern sonst um und uns unse unsem unsen unser unses unter viel vom von vor war waren warst was weg weil weiter welche welchem welchen welcher welches wenn werde werden wie wieder will wir wird wirst wo wollen wollte während würde würden zu zum zur zwar zwischen über".split(" ")),e.Pipeline.registerFunction(e.de.stopWordFilter,"stopWordFilter-de")}}); \ No newline at end of file diff --git a/pr-preview/pr-10/assets/javascripts/lunr/min/lunr.du.min.js b/pr-preview/pr-10/assets/javascripts/lunr/min/lunr.du.min.js deleted file mode 100644 index 49a0f3f..0000000 --- a/pr-preview/pr-10/assets/javascripts/lunr/min/lunr.du.min.js +++ /dev/null @@ -1,18 +0,0 @@ -/*! - * Lunr languages, `Dutch` language - * https://github.com/MihaiValentin/lunr-languages - * - * Copyright 2014, Mihai Valentin - * http://www.mozilla.org/MPL/ - */ -/*! - * based on - * Snowball JavaScript Library v0.3 - * http://code.google.com/p/urim/ - * http://snowball.tartarus.org/ - * - * Copyright 2010, Oleg Mazko - * http://www.mozilla.org/MPL/ - */ - -!function(e,r){"function"==typeof define&&define.amd?define(r):"object"==typeof exports?module.exports=r():r()(e.lunr)}(this,function(){return function(e){if(void 0===e)throw new Error("Lunr is not present. 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a/pr-preview/pr-10/assets/javascripts/lunr/min/lunr.es.min.js +++ /dev/null @@ -1,18 +0,0 @@ -/*! - * Lunr languages, `Spanish` language - * https://github.com/MihaiValentin/lunr-languages - * - * Copyright 2014, Mihai Valentin - * http://www.mozilla.org/MPL/ - */ -/*! - * based on - * Snowball JavaScript Library v0.3 - * http://code.google.com/p/urim/ - * http://snowball.tartarus.org/ - * - * Copyright 2010, Oleg Mazko - * http://www.mozilla.org/MPL/ - */ - -!function(e,s){"function"==typeof define&&define.amd?define(s):"object"==typeof exports?module.exports=s():s()(e.lunr)}(this,function(){return function(e){if(void 0===e)throw new Error("Lunr is not present. 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a/pr-preview/pr-10/assets/javascripts/lunr/min/lunr.it.min.js +++ /dev/null @@ -1,18 +0,0 @@ -/*! - * Lunr languages, `Italian` language - * https://github.com/MihaiValentin/lunr-languages - * - * Copyright 2014, Mihai Valentin - * http://www.mozilla.org/MPL/ - */ -/*! - * based on - * Snowball JavaScript Library v0.3 - * http://code.google.com/p/urim/ - * http://snowball.tartarus.org/ - * - * Copyright 2010, Oleg Mazko - * http://www.mozilla.org/MPL/ - */ - -!function(e,r){"function"==typeof define&&define.amd?define(r):"object"==typeof exports?module.exports=r():r()(e.lunr)}(this,function(){return function(e){if(void 0===e)throw new Error("Lunr is not present. Please include / require Lunr before this script.");if(void 0===e.stemmerSupport)throw new Error("Lunr stemmer support is not present. Please include / require Lunr stemmer support before this script.");e.it=function(){this.pipeline.reset(),this.pipeline.add(e.it.trimmer,e.it.stopWordFilter,e.it.stemmer),this.searchPipeline&&(this.searchPipeline.reset(),this.searchPipeline.add(e.it.stemmer))},e.it.wordCharacters="A-Za-zªºÀ-ÖØ-öø-ʸˠ-ˤᴀ-ᴥᴬ-ᵜᵢ-ᵥᵫ-ᵷᵹ-ᶾḀ-ỿⁱⁿₐ-ₜKÅℲⅎⅠ-ↈⱠ-ⱿꜢ-ꞇꞋ-ꞭꞰ-ꞷꟷ-ꟿꬰ-ꭚꭜ-ꭤff-stＡ-Ｚａ-ｚ",e.it.trimmer=e.trimmerSupport.generateTrimmer(e.it.wordCharacters),e.Pipeline.registerFunction(e.it.trimmer,"trimmer-it"),e.it.stemmer=function(){var r=e.stemmerSupport.Among,n=e.stemmerSupport.SnowballProgram,i=new function(){function e(e,r,n){return!(!x.eq_s(1,e)||(x.ket=x.cursor,!x.in_grouping(L,97,249)))&&(x.slice_from(r),x.cursor=n,!0)}function i(){for(var r,n,i,o,t=x.cursor;;){if(x.bra=x.cursor,r=x.find_among(h,7))switch(x.ket=x.cursor,r){case 1:x.slice_from("à");continue;case 2:x.slice_from("è");continue;case 3:x.slice_from("ì");continue;case 4:x.slice_from("ò");continue;case 5:x.slice_from("ù");continue;case 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avevo avrai avranno avrebbe avrebbero avrei avremmo avremo avreste avresti avrete avrà avrò avuta avute avuti avuto c che chi ci coi col come con contro cui da dagl dagli dai dal dall dalla dalle dallo degl degli dei del dell della delle dello di dov dove e ebbe ebbero ebbi ed era erano eravamo eravate eri ero essendo faccia facciamo facciano facciate faccio facemmo facendo facesse facessero facessi facessimo faceste facesti faceva facevamo facevano facevate facevi facevo fai fanno farai faranno farebbe farebbero farei faremmo faremo fareste faresti farete farà farò fece fecero feci fosse fossero fossi fossimo foste fosti fu fui fummo furono gli ha hai hanno ho i il in io l la le lei li lo loro lui ma mi mia mie miei mio ne negl negli nei nel nell nella nelle nello noi non nostra nostre nostri nostro o per perché più quale quanta quante quanti quanto quella quelle quelli quello questa queste questi questo sarai saranno sarebbe sarebbero sarei saremmo saremo sareste saresti sarete sarà sarò se sei si sia siamo siano siate siete sono sta stai stando stanno starai staranno starebbe starebbero starei staremmo staremo stareste staresti starete starà starò stava stavamo stavano stavate stavi stavo stemmo stesse stessero stessi stessimo steste stesti stette stettero stetti stia stiamo stiano stiate sto su sua sue sugl sugli sui sul sull sulla sulle sullo suo suoi ti tra tu tua tue tuo tuoi tutti tutto un una uno vi voi vostra vostre vostri vostro è".split(" ")),e.Pipeline.registerFunction(e.it.stopWordFilter,"stopWordFilter-it")}}); \ No newline at end of file diff --git a/pr-preview/pr-10/assets/javascripts/lunr/min/lunr.ja.min.js b/pr-preview/pr-10/assets/javascripts/lunr/min/lunr.ja.min.js deleted file mode 100644 index 5f254eb..0000000 --- a/pr-preview/pr-10/assets/javascripts/lunr/min/lunr.ja.min.js +++ /dev/null @@ -1 +0,0 @@ -!function(e,r){"function"==typeof define&&define.amd?define(r):"object"==typeof exports?module.exports=r():r()(e.lunr)}(this,function(){return 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t(){for(;!C.in_grouping(q,97,232);){if(C.cursor>=C.limit)return!0;C.cursor++}for(;!C.out_grouping(q,97,232);){if(C.cursor>=C.limit)return!0;C.cursor++}return!1}function s(){for(var r;;)if(C.bra=C.cursor,r=C.find_among(p,3))switch(C.ket=C.cursor,r){case 1:C.slice_from("y");break;case 2:C.slice_from("i");break;case 3:if(C.cursor>=C.limit)return;C.cursor++}}function u(){return _<=C.cursor}function c(){return d<=C.cursor}function a(){var r=C.limit-C.cursor;C.find_among_b(g,3)&&(C.cursor=C.limit-r,C.ket=C.cursor,C.cursor>C.limit_backward&&(C.cursor--,C.bra=C.cursor,C.slice_del()))}function l(){var r;w=!1,C.ket=C.cursor,C.eq_s_b(1,"e")&&(C.bra=C.cursor,u()&&(r=C.limit-C.cursor,C.out_grouping_b(q,97,232)&&(C.cursor=C.limit-r,C.slice_del(),w=!0,a())))}function m(){var r;u()&&(r=C.limit-C.cursor,C.out_grouping_b(q,97,232)&&(C.cursor=C.limit-r,C.eq_s_b(3,"gem")||(C.cursor=C.limit-r,C.slice_del(),a())))}function f(){var 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dă ea ei el ele eram este eu eşti face fata fi fie fiecare fii fim fiu fiţi frumos fără graţie halbă iar ieri la le li lor lui lângă lîngă mai mea mei mele mereu meu mi mie mine mult multă mulţi mulţumesc mâine mîine mă ne nevoie nici nicăieri nimeni nimeri nimic nişte noastre noastră noi noroc nostru nouă noştri nu opt ori oricare orice oricine oricum oricând oricât oricînd oricît oriunde patra patru patrulea pe pentru peste pic poate pot prea prima primul prin puţin puţina puţină până pînă rog sa sale sau se spate spre sub sunt suntem sunteţi sută sînt sîntem sînteţi să săi său ta tale te timp tine toate toată tot totuşi toţi trei treia treilea tu tăi tău un una unde undeva unei uneia unele uneori unii unor unora unu unui unuia unul vi voastre voastră voi vostru vouă voştri vreme vreo vreun vă zece zero zi zice îi îl îmi împotriva în înainte înaintea încotro încât încît între întrucât întrucît îţi ăla ălea ăsta ăstea ăştia şapte şase şi ştiu ţi ţie".split(" 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Dr.bra=Dr.cursor,Dr.slice_del(),i=Dr.limit-Dr.cursor,Dr.ket=Dr.cursor,W()?(Dr.bra=Dr.cursor,Dr.slice_del(),K()):(Dr.cursor=Dr.limit-i,a()&&(Dr.bra=Dr.cursor,Dr.slice_del(),Dr.ket=Dr.cursor,W()&&(Dr.bra=Dr.cursor,Dr.slice_del(),K()))),!0;if(Dr.cursor=Dr.limit-r,w()){if(Dr.bra=Dr.cursor,Dr.slice_del(),Dr.ket=Dr.cursor,e=Dr.limit-Dr.cursor,d())Dr.bra=Dr.cursor,Dr.slice_del();else{if(Dr.cursor=Dr.limit-e,Dr.ket=Dr.cursor,!a()&&(Dr.cursor=Dr.limit-e,!m()&&(Dr.cursor=Dr.limit-e,!K())))return!0;Dr.bra=Dr.cursor,Dr.slice_del(),Dr.ket=Dr.cursor,W()&&(Dr.bra=Dr.cursor,Dr.slice_del(),K())}return!0}if(Dr.cursor=Dr.limit-r,g()){if(n=Dr.limit-Dr.cursor,d())Dr.bra=Dr.cursor,Dr.slice_del();else if(Dr.cursor=Dr.limit-n,m())Dr.bra=Dr.cursor,Dr.slice_del(),Dr.ket=Dr.cursor,W()&&(Dr.bra=Dr.cursor,Dr.slice_del(),K());else if(Dr.cursor=Dr.limit-n,!K())return!1;return!0}}return!1}function M(r){if(Dr.ket=Dr.cursor,!g()&&(Dr.cursor=Dr.limit-r,!k()))return!1;var i=Dr.limit-Dr.cursor;if(d())Dr.bra=Dr.cursor,Dr.slice_del();else if(Dr.cursor=Dr.limit-i,m())Dr.bra=Dr.cursor,Dr.slice_del(),Dr.ket=Dr.cursor,W()&&(Dr.bra=Dr.cursor,Dr.slice_del(),K());else if(Dr.cursor=Dr.limit-i,!K())return!1;return!0}function N(r){if(Dr.ket=Dr.cursor,!z()&&(Dr.cursor=Dr.limit-r,!b()))return!1;var i=Dr.limit-Dr.cursor;return!(!m()&&(Dr.cursor=Dr.limit-i,!d()))&&(Dr.bra=Dr.cursor,Dr.slice_del(),Dr.ket=Dr.cursor,W()&&(Dr.bra=Dr.cursor,Dr.slice_del(),K()),!0)}function O(){var r,i=Dr.limit-Dr.cursor;return Dr.ket=Dr.cursor,!(!w()&&(Dr.cursor=Dr.limit-i,!v()))&&(Dr.bra=Dr.cursor,Dr.slice_del(),r=Dr.limit-Dr.cursor,Dr.ket=Dr.cursor,!(!W()||(Dr.bra=Dr.cursor,Dr.slice_del(),!K()))||(Dr.cursor=Dr.limit-r,Dr.ket=Dr.cursor,!(a()||(Dr.cursor=Dr.limit-r,m()||(Dr.cursor=Dr.limit-r,K())))||(Dr.bra=Dr.cursor,Dr.slice_del(),Dr.ket=Dr.cursor,W()&&(Dr.bra=Dr.cursor,Dr.slice_del(),K()),!0)))}function Q(){var r,i,e=Dr.limit-Dr.cursor;if(Dr.ket=Dr.cursor,!p()&&(Dr.cursor=Dr.limit-e,!f()&&(Dr.cursor=Dr.limit-e,!_())))return!1;if(Dr.bra=Dr.cursor,Dr.slice_del(),Dr.ket=Dr.cursor,r=Dr.limit-Dr.cursor,a())Dr.bra=Dr.cursor,Dr.slice_del(),i=Dr.limit-Dr.cursor,Dr.ket=Dr.cursor,W()||(Dr.cursor=Dr.limit-i);else if(Dr.cursor=Dr.limit-r,!W())return!0;return Dr.bra=Dr.cursor,Dr.slice_del(),Dr.ket=Dr.cursor,K(),!0}function R(){var r,i,e=Dr.limit-Dr.cursor;if(Dr.ket=Dr.cursor,W())return Dr.bra=Dr.cursor,Dr.slice_del(),void K();if(Dr.cursor=Dr.limit-e,Dr.ket=Dr.cursor,q())if(Dr.bra=Dr.cursor,Dr.slice_del(),r=Dr.limit-Dr.cursor,Dr.ket=Dr.cursor,d())Dr.bra=Dr.cursor,Dr.slice_del();else{if(Dr.cursor=Dr.limit-r,Dr.ket=Dr.cursor,!a()&&(Dr.cursor=Dr.limit-r,!m())){if(Dr.cursor=Dr.limit-r,Dr.ket=Dr.cursor,!W())return;if(Dr.bra=Dr.cursor,Dr.slice_del(),!K())return}Dr.bra=Dr.cursor,Dr.slice_del(),Dr.ket=Dr.cursor,W()&&(Dr.bra=Dr.cursor,Dr.slice_del(),K())}else 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r=Dr.limit-Dr.cursor;if(Dr.in_grouping_b(Wr,97,305)){Dr.cursor=Dr.limit-r;break}if(Dr.cursor=Dr.limit-r,Dr.cursor<=Dr.limit_backward)return!1;Dr.cursor--}return!0}function X(r,i,e){if(Dr.cursor=Dr.limit-r,V()){var n=Dr.limit-Dr.cursor;if(!Dr.eq_s_b(1,i)&&(Dr.cursor=Dr.limit-n,!Dr.eq_s_b(1,e)))return!0;Dr.cursor=Dr.limit-r;var t=Dr.cursor;return Dr.insert(Dr.cursor,Dr.cursor,e),Dr.cursor=t,!1}return!0}function Y(){var r=Dr.limit-Dr.cursor;(Dr.eq_s_b(1,"d")||(Dr.cursor=Dr.limit-r,Dr.eq_s_b(1,"g")))&&X(r,"a","ı")&&X(r,"e","i")&&X(r,"o","u")&&X(r,"ö","ü")}function $(){for(var r,i=Dr.cursor,e=2;;){for(r=Dr.cursor;!Dr.in_grouping(Wr,97,305);){if(Dr.cursor>=Dr.limit)return Dr.cursor=r,!(e>0)&&(Dr.cursor=i,!0);Dr.cursor++}e--}}function rr(r,i,e){for(;!Dr.eq_s(i,e);){if(Dr.cursor>=Dr.limit)return!0;Dr.cursor++}return(tr=i)!=Dr.limit||(Dr.cursor=r,!1)}function ir(){var r=Dr.cursor;return!rr(r,2,"ad")||(Dr.cursor=r,!rr(r,5,"soyad"))}function er(){var r=Dr.cursor;return!ir()&&(Dr.limit_backward=r,Dr.cursor=Dr.limit,Y(),Dr.cursor=Dr.limit,U(),!0)}var nr,tr,ur=[new i("m",-1,-1),new i("n",-1,-1),new i("miz",-1,-1),new i("niz",-1,-1),new i("muz",-1,-1),new i("nuz",-1,-1),new i("müz",-1,-1),new i("nüz",-1,-1),new i("mız",-1,-1),new i("nız",-1,-1)],or=[new i("leri",-1,-1),new i("ları",-1,-1)],sr=[new i("ni",-1,-1),new i("nu",-1,-1),new i("nü",-1,-1),new i("nı",-1,-1)],cr=[new i("in",-1,-1),new i("un",-1,-1),new i("ün",-1,-1),new i("ın",-1,-1)],lr=[new i("a",-1,-1),new i("e",-1,-1)],ar=[new i("na",-1,-1),new i("ne",-1,-1)],mr=[new i("da",-1,-1),new i("ta",-1,-1),new i("de",-1,-1),new i("te",-1,-1)],dr=[new i("nda",-1,-1),new i("nde",-1,-1)],fr=[new i("dan",-1,-1),new i("tan",-1,-1),new i("den",-1,-1),new i("ten",-1,-1)],br=[new i("ndan",-1,-1),new i("nden",-1,-1)],wr=[new i("la",-1,-1),new i("le",-1,-1)],_r=[new i("ca",-1,-1),new i("ce",-1,-1)],kr=[new i("im",-1,-1),new i("um",-1,-1),new i("üm",-1,-1),new i("ım",-1,-1)],pr=[new i("sin",-1,-1),new i("sun",-1,-1),new i("sün",-1,-1),new i("sın",-1,-1)],gr=[new i("iz",-1,-1),new i("uz",-1,-1),new i("üz",-1,-1),new i("ız",-1,-1)],yr=[new i("siniz",-1,-1),new i("sunuz",-1,-1),new i("sünüz",-1,-1),new i("sınız",-1,-1)],zr=[new i("lar",-1,-1),new i("ler",-1,-1)],vr=[new i("niz",-1,-1),new i("nuz",-1,-1),new i("nüz",-1,-1),new i("nız",-1,-1)],hr=[new i("dir",-1,-1),new i("tir",-1,-1),new i("dur",-1,-1),new i("tur",-1,-1),new i("dür",-1,-1),new i("tür",-1,-1),new i("dır",-1,-1),new i("tır",-1,-1)],qr=[new i("casına",-1,-1),new i("cesine",-1,-1)],Cr=[new i("di",-1,-1),new i("ti",-1,-1),new i("dik",-1,-1),new i("tik",-1,-1),new i("duk",-1,-1),new i("tuk",-1,-1),new i("dük",-1,-1),new i("tük",-1,-1),new i("dık",-1,-1),new i("tık",-1,-1),new i("dim",-1,-1),new i("tim",-1,-1),new i("dum",-1,-1),new i("tum",-1,-1),new i("düm",-1,-1),new i("tüm",-1,-1),new i("dım",-1,-1),new i("tım",-1,-1),new i("din",-1,-1),new i("tin",-1,-1),new i("dun",-1,-1),new i("tun",-1,-1),new i("dün",-1,-1),new i("tün",-1,-1),new i("dın",-1,-1),new i("tın",-1,-1),new i("du",-1,-1),new i("tu",-1,-1),new i("dü",-1,-1),new i("tü",-1,-1),new i("dı",-1,-1),new i("tı",-1,-1)],Pr=[new i("sa",-1,-1),new i("se",-1,-1),new i("sak",-1,-1),new i("sek",-1,-1),new i("sam",-1,-1),new i("sem",-1,-1),new i("san",-1,-1),new i("sen",-1,-1)],Fr=[new i("miş",-1,-1),new i("muş",-1,-1),new i("müş",-1,-1),new i("mış",-1,-1)],Sr=[new i("b",-1,1),new i("c",-1,2),new i("d",-1,3),new i("ğ",-1,4)],Wr=[17,65,16,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,32,8,0,0,0,0,0,0,1],Lr=[1,16,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8,0,0,0,0,0,0,1],xr=[1,64,16,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1],Ar=[17,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,130],Er=[1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1],jr=[17],Tr=[65],Zr=[65],Br=[["a",xr,97,305],["e",Ar,101,252],["ı",Er,97,305],["i",jr,101,105],["o",Tr,111,117],["ö",Zr,246,252],["u",Tr,111,117]],Dr=new e;this.setCurrent=function(r){Dr.setCurrent(r)},this.getCurrent=function(){return Dr.getCurrent()},this.stem=function(){return!!($()&&(Dr.limit_backward=Dr.cursor,Dr.cursor=Dr.limit,J(),Dr.cursor=Dr.limit,nr&&(R(),Dr.cursor=Dr.limit_backward,er())))}};return function(r){return"function"==typeof r.update?r.update(function(r){return n.setCurrent(r),n.stem(),n.getCurrent()}):(n.setCurrent(r),n.stem(),n.getCurrent())}}(),r.Pipeline.registerFunction(r.tr.stemmer,"stemmer-tr"),r.tr.stopWordFilter=r.generateStopWordFilter("acaba altmış altı ama ancak arada aslında ayrıca bana bazı belki ben benden beni benim beri beş bile bin bir biri birkaç birkez birçok birşey birşeyi biz bizden bize bizi bizim bu buna bunda bundan bunlar bunları bunların bunu bunun burada böyle böylece da daha dahi de defa değil diye diğer doksan dokuz dolayı dolayısıyla dört edecek eden ederek edilecek ediliyor edilmesi ediyor elli en etmesi etti ettiği ettiğini eğer gibi göre halen hangi hatta hem henüz hep hepsi her herhangi herkesin hiç hiçbir iki ile ilgili ise itibaren itibariyle için işte kadar karşın katrilyon kendi kendilerine kendini kendisi kendisine kendisini kez ki kim kimden kime kimi kimse kırk milyar milyon mu mü mı nasıl ne neden nedenle nerde nerede nereye niye niçin o olan olarak oldu olduklarını olduğu olduğunu olmadı olmadığı olmak olması olmayan olmaz olsa olsun olup olur olursa oluyor on ona ondan onlar onlardan onları onların onu onun otuz oysa pek rağmen sadece sanki sekiz seksen sen senden seni senin siz sizden sizi sizin tarafından trilyon tüm var vardı ve veya ya yani yapacak yapmak yaptı yaptıkları yaptığı yaptığını yapılan yapılması yapıyor yedi yerine yetmiş yine yirmi yoksa yüz zaten çok çünkü öyle üzere üç şey şeyden şeyi şeyler şu şuna şunda şundan şunları şunu şöyle".split(" ")),r.Pipeline.registerFunction(r.tr.stopWordFilter,"stopWordFilter-tr")}}); \ No newline at end of file diff --git a/pr-preview/pr-10/assets/javascripts/lunr/min/lunr.vi.min.js b/pr-preview/pr-10/assets/javascripts/lunr/min/lunr.vi.min.js deleted file mode 100644 index 22aed28..0000000 --- a/pr-preview/pr-10/assets/javascripts/lunr/min/lunr.vi.min.js +++ /dev/null @@ -1 +0,0 @@ -!function(e,r){"function"==typeof define&&define.amd?define(r):"object"==typeof exports?module.exports=r():r()(e.lunr)}(this,function(){return function(e){if(void 0===e)throw new Error("Lunr is not present. Please include / require Lunr before this script.");if(void 0===e.stemmerSupport)throw new Error("Lunr stemmer support is not present. Please include / require Lunr stemmer support before this script.");e.vi=function(){this.pipeline.reset(),this.pipeline.add(e.vi.stopWordFilter,e.vi.trimmer)},e.vi.wordCharacters="[A-Za-ẓ̀͐́͑̉̃̓ÂâÊêÔôĂ-ăĐ-đƠ-ơƯ-ư]",e.vi.trimmer=e.trimmerSupport.generateTrimmer(e.vi.wordCharacters),e.Pipeline.registerFunction(e.vi.trimmer,"trimmer-vi"),e.vi.stopWordFilter=e.generateStopWordFilter("là cái nhưng mà".split(" "))}}); \ No newline at end of file diff --git a/pr-preview/pr-10/assets/javascripts/lunr/min/lunr.zh.min.js b/pr-preview/pr-10/assets/javascripts/lunr/min/lunr.zh.min.js deleted file mode 100644 index 9838ef9..0000000 --- a/pr-preview/pr-10/assets/javascripts/lunr/min/lunr.zh.min.js +++ /dev/null @@ -1 +0,0 @@ -!function(e,r){"function"==typeof define&&define.amd?define(r):"object"==typeof exports?module.exports=r(require("@node-rs/jieba")):r()(e.lunr)}(this,function(e){return function(r,t){if(void 0===r)throw new Error("Lunr is not present. Please include / require Lunr before this script.");if(void 0===r.stemmerSupport)throw new Error("Lunr stemmer support is not present. Please include / require Lunr stemmer support before this script.");var i="2"==r.version[0];r.zh=function(){this.pipeline.reset(),this.pipeline.add(r.zh.trimmer,r.zh.stopWordFilter,r.zh.stemmer),i?this.tokenizer=r.zh.tokenizer:(r.tokenizer&&(r.tokenizer=r.zh.tokenizer),this.tokenizerFn&&(this.tokenizerFn=r.zh.tokenizer))},r.zh.tokenizer=function(n){if(!arguments.length||null==n||void 0==n)return[];if(Array.isArray(n))return n.map(function(e){return i?new r.Token(e.toLowerCase()):e.toLowerCase()});t&&e.load(t);var o=n.toString().trim().toLowerCase(),s=[];e.cut(o,!0).forEach(function(e){s=s.concat(e.split(" "))}),s=s.filter(function(e){return!!e});var u=0;return s.map(function(e,t){if(i){var n=o.indexOf(e,u),s={};return s.position=[n,e.length],s.index=t,u=n,new r.Token(e,s)}return e})},r.zh.wordCharacters="\\w一-龥",r.zh.trimmer=r.trimmerSupport.generateTrimmer(r.zh.wordCharacters),r.Pipeline.registerFunction(r.zh.trimmer,"trimmer-zh"),r.zh.stemmer=function(){return function(e){return e}}(),r.Pipeline.registerFunction(r.zh.stemmer,"stemmer-zh"),r.zh.stopWordFilter=r.generateStopWordFilter("的 一 不 在 人 有 是 为 以 于 上 他 而 后 之 来 及 了 因 下 可 到 由 这 与 也 此 但 并 个 其 已 无 小 我 们 起 最 再 今 去 好 只 又 或 很 亦 某 把 那 你 乃 它 吧 被 比 别 趁 当 从 到 得 打 凡 儿 尔 该 各 给 跟 和 何 还 即 几 既 看 据 距 靠 啦 了 另 么 每 们 嘛 拿 哪 那 您 凭 且 却 让 仍 啥 如 若 使 谁 虽 随 同 所 她 哇 嗡 往 哪 些 向 沿 哟 用 于 咱 则 怎 曾 至 致 着 诸 自".split(" ")),r.Pipeline.registerFunction(r.zh.stopWordFilter,"stopWordFilter-zh")}}); \ No newline at end of file diff --git a/pr-preview/pr-10/assets/javascripts/lunr/tinyseg.js b/pr-preview/pr-10/assets/javascripts/lunr/tinyseg.js deleted file mode 100644 index 167fa6d..0000000 --- a/pr-preview/pr-10/assets/javascripts/lunr/tinyseg.js +++ /dev/null @@ -1,206 +0,0 @@ -/** - * export the module via AMD, CommonJS or as a browser global - * Export code from https://github.com/umdjs/umd/blob/master/returnExports.js - */ -;(function (root, factory) { - if (typeof define === 'function' && define.amd) { - // AMD. Register as an anonymous module. - define(factory) - } else if (typeof exports === 'object') { - /** - * Node. 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j <= i; j++) { - path[j].merge = p; - } - info.merge = p; - } - - return info; - }); - return infos.filter(function(info) { return info; }); - }, - - fallback: function(path, leftBoundary, text, i) { - var _info = path[leftBoundary]; - if (text[i].match(/[\u0E48-\u0E4E]/)) { - if (leftBoundary != 0) - leftBoundary = path[leftBoundary].p; - return {p: leftBoundary, - mw: 0, - w: 1 + _info.w, - unk: 1 + _info.unk, - type: "UNK"}; -/* } else if(leftBoundary > 0 && path[leftBoundary].type !== "UNK") { - leftBoundary = path[leftBoundary].p; - return {p: leftBoundary, - w: 1 + _info.w, - unk: 1 + _info.unk, - type: "UNK"}; */ - } else { - return {p: leftBoundary, - mw: _info.mw, - w: 1 + _info.w, - unk: 1 + _info.unk, - type: "UNK"}; - } - }, - - build: function(path, finalAcceptors, i, leftBoundary, text) { - var basicPathInfos = this.buildByAcceptors(path, finalAcceptors, i); - if (basicPathInfos.length > 0) { - return basicPathInfos; - } else { - return [this.fallback(path, leftBoundary, text, i)]; - } - } -}; - -module.exports = function() { - return _.clone(PathInfoBuilder); -} - -},{"./wordcut_core":8,"underscore":25}],5:[function(require,module,exports){ -var _ = require("underscore"); - - -var PathSelector = { - selectPath: function(paths) { - var path = paths.reduce(function(selectedPath, path) { - if (selectedPath == null) { - return path; - } else { - if (path.unk < selectedPath.unk) - return path; - if (path.unk == selectedPath.unk) { - if (path.mw < selectedPath.mw) - return path - if (path.mw == selectedPath.mw) { - if (path.w < selectedPath.w) - return path; - } - } - return selectedPath; - } - }, null); - return path; - }, - - createPath: function() { - return [{p:null, w:0, unk:0, type: "INIT", mw:0}]; - } -}; - -module.exports = function() { - return _.clone(PathSelector); -}; - -},{"underscore":25}],6:[function(require,module,exports){ -function isMatch(pat, offset, ch) { - if (pat.length <= offset) - return false; - var _ch = pat[offset]; - return _ch == ch || - (_ch.match(/[กข]/) && ch.match(/[ก-ฮ]/)) || - (_ch.match(/[มบ]/) && ch.match(/[ก-ฮ]/)) || - (_ch.match(/\u0E49/) && ch.match(/[\u0E48-\u0E4B]/)); -} - -var Rule0 = { - pat: "เหก็ม", - createAcceptor: function(tag) { - return {strOffset: 0, - isFinal: false, - transit: function(ch) { - if (isMatch(Rule0.pat, this.strOffset,ch)) { - this.isFinal = (this.strOffset + 1 == Rule0.pat.length); - this.strOffset++; - } else { - this.isError = true; - } - return this; - }, - isError: false, - tag: "THAI_RULE", - type: "THAI_RULE", - w: 1}; - } -}; - -var PartRule = { - createAcceptor: function(tag) { - return {strOffset: 0, - patterns: [ - "แก", "เก", "ก้", "กก์", "กา", "กี", "กิ", "กืก" - ], - isFinal: false, - transit: function(ch) { - var offset = this.strOffset; - this.patterns = this.patterns.filter(function(pat) { - return isMatch(pat, offset, ch); - }); - - if (this.patterns.length > 0) { - var len = 1 + offset; - this.isFinal = this.patterns.some(function(pat) { - return pat.length == len; - }); - this.strOffset++; - } else { - this.isError = true; - } - return this; - }, - isError: false, - tag: "PART", - type: "PART", - unk: 1, - w: 1}; - } -}; - -var ThaiRules = [Rule0, PartRule]; - -module.exports = ThaiRules; - -},{}],7:[function(require,module,exports){ -var sys = require("sys") - , WordcutDict = require("./dict") - , WordcutCore = require("./wordcut_core") - , PathInfoBuilder = require("./path_info_builder") - , PathSelector = require("./path_selector") - , Acceptors = require("./acceptors") - , latinRules = require("./latin_rules") - , thaiRules = require("./thai_rules") - , _ = require("underscore"); - - -var Wordcut = Object.create(WordcutCore); -Wordcut.defaultPathInfoBuilder = PathInfoBuilder; -Wordcut.defaultPathSelector = PathSelector; -Wordcut.defaultAcceptors = Acceptors; -Wordcut.defaultLatinRules = latinRules; -Wordcut.defaultThaiRules = thaiRules; -Wordcut.defaultDict = WordcutDict; - - -Wordcut.initNoDict = function(dict_path) { - var self = this; - self.pathInfoBuilder = new self.defaultPathInfoBuilder; - self.pathSelector = new self.defaultPathSelector; - self.acceptors = new self.defaultAcceptors; - self.defaultLatinRules.forEach(function(rule) { - self.acceptors.creators.push(rule); - }); - self.defaultThaiRules.forEach(function(rule) { - self.acceptors.creators.push(rule); - }); -}; - -Wordcut.init = function(dict_path, withDefault, additionalWords) { - withDefault = withDefault || false; - this.initNoDict(); - var dict = _.clone(this.defaultDict); - dict.init(dict_path, withDefault, additionalWords); - this.acceptors.creators.push(dict); -}; - -module.exports = Wordcut; - -},{"./acceptors":1,"./dict":2,"./latin_rules":3,"./path_info_builder":4,"./path_selector":5,"./thai_rules":6,"./wordcut_core":8,"sys":28,"underscore":25}],8:[function(require,module,exports){ -var WordcutCore = { - - buildPath: function(text) { - var self = this - , path = self.pathSelector.createPath() - , leftBoundary = 0; - self.acceptors.reset(); - for (var i = 0; i < text.length; i++) { - var ch = text[i]; - self.acceptors.transit(ch); - - var possiblePathInfos = self - .pathInfoBuilder - .build(path, - self.acceptors.getFinalAcceptors(), - i, - leftBoundary, - text); - var selectedPath = self.pathSelector.selectPath(possiblePathInfos) - - path.push(selectedPath); - if (selectedPath.type !== "UNK") { - leftBoundary = i; - } - } - return path; - }, - - pathToRanges: function(path) { - var e = path.length - 1 - , ranges = []; - - while (e > 0) { - var info = path[e] - , s = info.p; - - if (info.merge !== undefined && ranges.length > 0) { - var r = ranges[ranges.length - 1]; - r.s = info.merge; - s = r.s; - } else { - ranges.push({s:s, e:e}); - } - e = s; - } - return ranges.reverse(); - }, - - rangesToText: function(text, ranges, delimiter) { - return ranges.map(function(r) { - return text.substring(r.s, r.e); - }).join(delimiter); - }, - - cut: function(text, delimiter) { - var path = this.buildPath(text) - , ranges = this.pathToRanges(path); - return this - .rangesToText(text, ranges, - (delimiter === undefined ? "|" : delimiter)); - }, - - cutIntoRanges: function(text, noText) { - var path = this.buildPath(text) - , ranges = this.pathToRanges(path); - - if (!noText) { - ranges.forEach(function(r) { - r.text = text.substring(r.s, r.e); - }); - } - return ranges; - }, - - cutIntoArray: function(text) { - var path = this.buildPath(text) - , ranges = this.pathToRanges(path); - - return ranges.map(function(r) { - return text.substring(r.s, r.e) - }); - } -}; - -module.exports = WordcutCore; - -},{}],9:[function(require,module,exports){ -// http://wiki.commonjs.org/wiki/Unit_Testing/1.0 -// -// THIS IS NOT TESTED NOR LIKELY TO WORK OUTSIDE V8! -// -// Originally from narwhal.js (http://narwhaljs.org) -// Copyright (c) 2009 Thomas Robinson <280north.com> -// -// Permission is hereby granted, free of charge, to any person obtaining a copy -// of this software and associated documentation files (the 'Software'), to -// deal in the Software without restriction, including without limitation the -// rights to use, copy, modify, merge, publish, distribute, sublicense, and/or -// sell copies of the Software, and to permit persons to whom the Software is -// furnished to do so, subject to the following conditions: -// -// The above copyright notice and this permission notice shall be included in -// all copies or substantial portions of the Software. -// -// THE SOFTWARE IS PROVIDED 'AS IS', WITHOUT WARRANTY OF ANY KIND, EXPRESS OR -// IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, -// FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE -// AUTHORS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN -// ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION -// WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE. - -// when used in node, this will actually load the util module we depend on -// versus loading the builtin util module as happens otherwise -// this is a bug in node module loading as far as I am concerned -var util = require('util/'); - -var pSlice = Array.prototype.slice; -var hasOwn = Object.prototype.hasOwnProperty; - -// 1. The assert module provides functions that throw -// AssertionError's when particular conditions are not met. The -// assert module must conform to the following interface. - -var assert = module.exports = ok; - -// 2. The AssertionError is defined in assert. -// new assert.AssertionError({ message: message, -// actual: actual, -// expected: expected }) - -assert.AssertionError = function AssertionError(options) { - this.name = 'AssertionError'; - this.actual = options.actual; - this.expected = options.expected; - this.operator = options.operator; - if (options.message) { - this.message = options.message; - this.generatedMessage = false; - } else { - this.message = getMessage(this); - this.generatedMessage = true; - } - var stackStartFunction = options.stackStartFunction || fail; - - if (Error.captureStackTrace) { - Error.captureStackTrace(this, stackStartFunction); - } - else { - // non v8 browsers so we can have a stacktrace - var err = new Error(); - if (err.stack) { - var out = err.stack; - - // try to strip useless frames - var fn_name = stackStartFunction.name; - var idx = out.indexOf('\n' + fn_name); - if (idx >= 0) { - // once we have located the function frame - // we need to strip out everything before it (and its line) - var next_line = out.indexOf('\n', idx + 1); - out = out.substring(next_line + 1); - } - - this.stack = out; - } - } -}; - -// assert.AssertionError instanceof Error -util.inherits(assert.AssertionError, Error); - -function replacer(key, value) { - if (util.isUndefined(value)) { - return '' + value; - } - if (util.isNumber(value) && !isFinite(value)) { - return value.toString(); - } - if (util.isFunction(value) || util.isRegExp(value)) { - return value.toString(); - } - return value; -} - -function truncate(s, n) { - if (util.isString(s)) { - return s.length < n ? s : s.slice(0, n); - } else { - return s; - } -} - -function getMessage(self) { - return truncate(JSON.stringify(self.actual, replacer), 128) + ' ' + - self.operator + ' ' + - truncate(JSON.stringify(self.expected, replacer), 128); -} - -// At present only the three keys mentioned above are used and -// understood by the spec. Implementations or sub modules can pass -// other keys to the AssertionError's constructor - they will be -// ignored. - -// 3. All of the following functions must throw an AssertionError -// when a corresponding condition is not met, with a message that -// may be undefined if not provided. All assertion methods provide -// both the actual and expected values to the assertion error for -// display purposes. - -function fail(actual, expected, message, operator, stackStartFunction) { - throw new assert.AssertionError({ - message: message, - actual: actual, - expected: expected, - operator: operator, - stackStartFunction: stackStartFunction - }); -} - -// EXTENSION! allows for well behaved errors defined elsewhere. -assert.fail = fail; - -// 4. Pure assertion tests whether a value is truthy, as determined -// by !!guard. -// assert.ok(guard, message_opt); -// This statement is equivalent to assert.equal(true, !!guard, -// message_opt);. To test strictly for the value true, use -// assert.strictEqual(true, guard, message_opt);. - -function ok(value, message) { - if (!value) fail(value, true, message, '==', assert.ok); -} -assert.ok = ok; - -// 5. The equality assertion tests shallow, coercive equality with -// ==. -// assert.equal(actual, expected, message_opt); - -assert.equal = function equal(actual, expected, message) { - if (actual != expected) fail(actual, expected, message, '==', assert.equal); -}; - -// 6. The non-equality assertion tests for whether two objects are not equal -// with != assert.notEqual(actual, expected, message_opt); - -assert.notEqual = function notEqual(actual, expected, message) { - if (actual == expected) { - fail(actual, expected, message, '!=', assert.notEqual); - } -}; - -// 7. The equivalence assertion tests a deep equality relation. -// assert.deepEqual(actual, expected, message_opt); - -assert.deepEqual = function deepEqual(actual, expected, message) { - if (!_deepEqual(actual, expected)) { - fail(actual, expected, message, 'deepEqual', assert.deepEqual); - } -}; - -function _deepEqual(actual, expected) { - // 7.1. All identical values are equivalent, as determined by ===. - if (actual === expected) { - return true; - - } else if (util.isBuffer(actual) && util.isBuffer(expected)) { - if (actual.length != expected.length) return false; - - for (var i = 0; i < actual.length; i++) { - if (actual[i] !== expected[i]) return false; - } - - return true; - - // 7.2. If the expected value is a Date object, the actual value is - // equivalent if it is also a Date object that refers to the same time. - } else if (util.isDate(actual) && util.isDate(expected)) { - return actual.getTime() === expected.getTime(); - - // 7.3 If the expected value is a RegExp object, the actual value is - // equivalent if it is also a RegExp object with the same source and - // properties (`global`, `multiline`, `lastIndex`, `ignoreCase`). - } else if (util.isRegExp(actual) && util.isRegExp(expected)) { - return actual.source === expected.source && - actual.global === expected.global && - actual.multiline === expected.multiline && - actual.lastIndex === expected.lastIndex && - actual.ignoreCase === expected.ignoreCase; - - // 7.4. Other pairs that do not both pass typeof value == 'object', - // equivalence is determined by ==. - } else if (!util.isObject(actual) && !util.isObject(expected)) { - return actual == expected; - - // 7.5 For all other Object pairs, including Array objects, equivalence is - // determined by having the same number of owned properties (as verified - // with Object.prototype.hasOwnProperty.call), the same set of keys - // (although not necessarily the same order), equivalent values for every - // corresponding key, and an identical 'prototype' property. Note: this - // accounts for both named and indexed properties on Arrays. - } else { - return objEquiv(actual, expected); - } -} - -function isArguments(object) { - return Object.prototype.toString.call(object) == '[object Arguments]'; -} - -function objEquiv(a, b) { - if (util.isNullOrUndefined(a) || util.isNullOrUndefined(b)) - return false; - // an identical 'prototype' property. - if (a.prototype !== b.prototype) return false; - // if one is a primitive, the other must be same - if (util.isPrimitive(a) || util.isPrimitive(b)) { - return a === b; - } - var aIsArgs = isArguments(a), - bIsArgs = isArguments(b); - if ((aIsArgs && !bIsArgs) || (!aIsArgs && bIsArgs)) - return false; - if (aIsArgs) { - a = pSlice.call(a); - b = pSlice.call(b); - return _deepEqual(a, b); - } - var ka = objectKeys(a), - kb = objectKeys(b), - key, i; - // having the same number of owned properties (keys incorporates - // hasOwnProperty) - if (ka.length != kb.length) - return false; - //the same set of keys (although not necessarily the same order), - ka.sort(); - kb.sort(); - //~~~cheap key test - for (i = ka.length - 1; i >= 0; i--) { - if (ka[i] != kb[i]) - return false; - } - //equivalent values for every corresponding key, and - //~~~possibly expensive deep test - for (i = ka.length - 1; i >= 0; i--) { - key = ka[i]; - if (!_deepEqual(a[key], b[key])) return false; - } - return true; -} - -// 8. The non-equivalence assertion tests for any deep inequality. -// assert.notDeepEqual(actual, expected, message_opt); - -assert.notDeepEqual = function notDeepEqual(actual, expected, message) { - if (_deepEqual(actual, expected)) { - fail(actual, expected, message, 'notDeepEqual', assert.notDeepEqual); - } -}; - -// 9. The strict equality assertion tests strict equality, as determined by ===. -// assert.strictEqual(actual, expected, message_opt); - -assert.strictEqual = function strictEqual(actual, expected, message) { - if (actual !== expected) { - fail(actual, expected, message, '===', assert.strictEqual); - } -}; - -// 10. The strict non-equality assertion tests for strict inequality, as -// determined by !==. assert.notStrictEqual(actual, expected, message_opt); - -assert.notStrictEqual = function notStrictEqual(actual, expected, message) { - if (actual === expected) { - fail(actual, expected, message, '!==', assert.notStrictEqual); - } -}; - -function expectedException(actual, expected) { - if (!actual || !expected) { - return false; - } - - if (Object.prototype.toString.call(expected) == '[object RegExp]') { - return expected.test(actual); - } else if (actual instanceof expected) { - return true; - } else if (expected.call({}, actual) === true) { - return true; - } - - return false; -} - -function _throws(shouldThrow, block, expected, message) { - var actual; - - if (util.isString(expected)) { - message = expected; - expected = null; - } - - try { - block(); - } catch (e) { - actual = e; - } - - message = (expected && expected.name ? ' (' + expected.name + ').' : '.') + - (message ? ' ' + message : '.'); - - if (shouldThrow && !actual) { - fail(actual, expected, 'Missing expected exception' + message); - } - - if (!shouldThrow && expectedException(actual, expected)) { - fail(actual, expected, 'Got unwanted exception' + message); - } - - if ((shouldThrow && actual && expected && - !expectedException(actual, expected)) || (!shouldThrow && actual)) { - throw actual; - } -} - -// 11. Expected to throw an error: -// assert.throws(block, Error_opt, message_opt); - -assert.throws = function(block, /*optional*/error, /*optional*/message) { - _throws.apply(this, [true].concat(pSlice.call(arguments))); -}; - -// EXTENSION! This is annoying to write outside this module. -assert.doesNotThrow = function(block, /*optional*/message) { - _throws.apply(this, [false].concat(pSlice.call(arguments))); -}; - -assert.ifError = function(err) { if (err) {throw err;}}; - -var objectKeys = Object.keys || function (obj) { - var keys = []; - for (var key in obj) { - if (hasOwn.call(obj, key)) keys.push(key); - } - return keys; -}; - -},{"util/":28}],10:[function(require,module,exports){ -'use strict'; -module.exports = balanced; -function balanced(a, b, str) { - if (a instanceof RegExp) a = maybeMatch(a, str); - if (b instanceof RegExp) b = maybeMatch(b, str); - - var r = range(a, b, str); - - return r && { - start: r[0], - end: r[1], - pre: str.slice(0, r[0]), - body: str.slice(r[0] + a.length, r[1]), - post: str.slice(r[1] + b.length) - }; -} - -function maybeMatch(reg, str) { - var m = str.match(reg); - return m ? m[0] : null; -} - -balanced.range = range; -function range(a, b, str) { - var begs, beg, left, right, result; - var ai = str.indexOf(a); - var bi = str.indexOf(b, ai + 1); - var i = ai; - - if (ai >= 0 && bi > 0) { - begs = []; - left = str.length; - - while (i >= 0 && !result) { - if (i == ai) { - begs.push(i); - ai = str.indexOf(a, i + 1); - } else if (begs.length == 1) { - result = [ begs.pop(), bi ]; - } else { - beg = begs.pop(); - if (beg < left) { - left = beg; - right = bi; - } - - bi = str.indexOf(b, i + 1); - } - - i = ai < bi && ai >= 0 ? ai : bi; - } - - if (begs.length) { - result = [ left, right ]; - } - } - - return result; -} - -},{}],11:[function(require,module,exports){ -var concatMap = require('concat-map'); -var balanced = require('balanced-match'); - -module.exports = expandTop; - -var escSlash = '\0SLASH'+Math.random()+'\0'; -var escOpen = '\0OPEN'+Math.random()+'\0'; -var escClose = '\0CLOSE'+Math.random()+'\0'; -var escComma = '\0COMMA'+Math.random()+'\0'; -var escPeriod = '\0PERIOD'+Math.random()+'\0'; - -function numeric(str) { - return parseInt(str, 10) == str - ? parseInt(str, 10) - : str.charCodeAt(0); -} - -function escapeBraces(str) { - return str.split('\\\\').join(escSlash) - .split('\\{').join(escOpen) - .split('\\}').join(escClose) - .split('\\,').join(escComma) - .split('\\.').join(escPeriod); -} - -function unescapeBraces(str) { - return str.split(escSlash).join('\\') - .split(escOpen).join('{') - .split(escClose).join('}') - .split(escComma).join(',') - .split(escPeriod).join('.'); -} - - -// Basically just str.split(","), but handling cases -// where we have nested braced sections, which should be -// treated as individual members, like {a,{b,c},d} -function parseCommaParts(str) { - if (!str) - return ['']; - - var parts = []; - var m = balanced('{', '}', str); - - if (!m) - return str.split(','); - - var pre = m.pre; - var body = m.body; - var post = m.post; - var p = pre.split(','); - - p[p.length-1] += '{' + body + '}'; - var postParts = parseCommaParts(post); - if (post.length) { - p[p.length-1] += postParts.shift(); - p.push.apply(p, postParts); - } - - parts.push.apply(parts, p); - - return parts; -} - -function expandTop(str) { - if (!str) - return []; - - // I don't know why Bash 4.3 does this, but it does. - // Anything starting with {} will have the first two bytes preserved - // but *only* at the top level, so {},a}b will not expand to anything, - // but a{},b}c will be expanded to [a}c,abc]. - // One could argue that this is a bug in Bash, but since the goal of - // this module is to match Bash's rules, we escape a leading {} - if (str.substr(0, 2) === '{}') { - str = '\\{\\}' + str.substr(2); - } - - return expand(escapeBraces(str), true).map(unescapeBraces); -} - -function identity(e) { - return e; -} - -function embrace(str) { - return '{' + str + '}'; -} -function isPadded(el) { - return /^-?0\d/.test(el); -} - -function lte(i, y) { - return i <= y; -} -function gte(i, y) { - return i >= y; -} - -function expand(str, isTop) { - var expansions = []; - - var m = balanced('{', '}', str); - if (!m || /\$$/.test(m.pre)) return [str]; - - var isNumericSequence = /^-?\d+\.\.-?\d+(?:\.\.-?\d+)?$/.test(m.body); - var isAlphaSequence = /^[a-zA-Z]\.\.[a-zA-Z](?:\.\.-?\d+)?$/.test(m.body); - var isSequence = isNumericSequence || isAlphaSequence; - var isOptions = m.body.indexOf(',') >= 0; - if (!isSequence && !isOptions) { - // {a},b} - if (m.post.match(/,.*\}/)) { - str = m.pre + '{' + m.body + escClose + m.post; - return expand(str); - } - return [str]; - } - - var n; - if (isSequence) { - n = m.body.split(/\.\./); - } else { - n = parseCommaParts(m.body); - if (n.length === 1) { - // x{{a,b}}y ==> x{a}y x{b}y - n = expand(n[0], false).map(embrace); - if (n.length === 1) { - var post = m.post.length - ? expand(m.post, false) - : ['']; - return post.map(function(p) { - return m.pre + n[0] + p; - }); - } - } - } - - // at this point, n is the parts, and we know it's not a comma set - // with a single entry. - - // no need to expand pre, since it is guaranteed to be free of brace-sets - var pre = m.pre; - var post = m.post.length - ? expand(m.post, false) - : ['']; - - var N; - - if (isSequence) { - var x = numeric(n[0]); - var y = numeric(n[1]); - var width = Math.max(n[0].length, n[1].length) - var incr = n.length == 3 - ? Math.abs(numeric(n[2])) - : 1; - var test = lte; - var reverse = y < x; - if (reverse) { - incr *= -1; - test = gte; - } - var pad = n.some(isPadded); - - N = []; - - for (var i = x; test(i, y); i += incr) { - var c; - if (isAlphaSequence) { - c = String.fromCharCode(i); - if (c === '\\') - c = ''; - } else { - c = String(i); - if (pad) { - var need = width - c.length; - if (need > 0) { - var z = new Array(need + 1).join('0'); - if (i < 0) - c = '-' + z + c.slice(1); - else - c = z + c; - } - } - } - N.push(c); - } - } else { - N = concatMap(n, function(el) { return expand(el, false) }); - } - - for (var j = 0; j < N.length; j++) { - for (var k = 0; k < post.length; k++) { - var expansion = pre + N[j] + post[k]; - if (!isTop || isSequence || expansion) - expansions.push(expansion); - } - } - - return expansions; -} - - -},{"balanced-match":10,"concat-map":13}],12:[function(require,module,exports){ - -},{}],13:[function(require,module,exports){ -module.exports = function (xs, fn) { - var res = []; - for (var i = 0; i < xs.length; i++) { - var x = fn(xs[i], i); - if (isArray(x)) res.push.apply(res, x); - else res.push(x); - } - return res; -}; - -var isArray = Array.isArray || function (xs) { - return Object.prototype.toString.call(xs) === '[object Array]'; -}; - -},{}],14:[function(require,module,exports){ -// Copyright Joyent, Inc. and other Node contributors. -// -// Permission is hereby granted, free of charge, to any person obtaining a -// copy of this software and associated documentation files (the -// "Software"), to deal in the Software without restriction, including -// without limitation the rights to use, copy, modify, merge, publish, -// distribute, sublicense, and/or sell copies of the Software, and to permit -// persons to whom the Software is furnished to do so, subject to the -// following conditions: -// -// The above copyright notice and this permission notice shall be included -// in all copies or substantial portions of the Software. -// -// THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS -// OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF -// MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN -// NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, -// DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR -// OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE -// USE OR OTHER DEALINGS IN THE SOFTWARE. - -function EventEmitter() { - this._events = this._events || {}; - this._maxListeners = this._maxListeners || undefined; -} -module.exports = EventEmitter; - -// Backwards-compat with node 0.10.x -EventEmitter.EventEmitter = EventEmitter; - -EventEmitter.prototype._events = undefined; -EventEmitter.prototype._maxListeners = undefined; - -// By default EventEmitters will print a warning if more than 10 listeners are -// added to it. This is a useful default which helps finding memory leaks. -EventEmitter.defaultMaxListeners = 10; - -// Obviously not all Emitters should be limited to 10. This function allows -// that to be increased. Set to zero for unlimited. -EventEmitter.prototype.setMaxListeners = function(n) { - if (!isNumber(n) || n < 0 || isNaN(n)) - throw TypeError('n must be a positive number'); - this._maxListeners = n; - return this; -}; - -EventEmitter.prototype.emit = function(type) { - var er, handler, len, args, i, listeners; - - if (!this._events) - this._events = {}; - - // If there is no 'error' event listener then throw. - if (type === 'error') { - if (!this._events.error || - (isObject(this._events.error) && !this._events.error.length)) { - er = arguments[1]; - if (er instanceof Error) { - throw er; // Unhandled 'error' event - } - throw TypeError('Uncaught, unspecified "error" event.'); - } - } - - handler = this._events[type]; - - if (isUndefined(handler)) - return false; - - if (isFunction(handler)) { - switch (arguments.length) { - // fast cases - case 1: - handler.call(this); - break; - case 2: - handler.call(this, arguments[1]); - break; - case 3: - handler.call(this, arguments[1], arguments[2]); - break; - // slower - default: - len = arguments.length; - args = new Array(len - 1); - for (i = 1; i < len; i++) - args[i - 1] = arguments[i]; - handler.apply(this, args); - } - } else if (isObject(handler)) { - len = arguments.length; - args = new Array(len - 1); - for (i = 1; i < len; i++) - args[i - 1] = arguments[i]; - - listeners = handler.slice(); - len = listeners.length; - for (i = 0; i < len; i++) - listeners[i].apply(this, args); - } - - return true; -}; - -EventEmitter.prototype.addListener = function(type, listener) { - var m; - - if (!isFunction(listener)) - throw TypeError('listener must be a function'); - - if (!this._events) - this._events = {}; - - // To avoid recursion in the case that type === "newListener"! Before - // adding it to the listeners, first emit "newListener". - if (this._events.newListener) - this.emit('newListener', type, - isFunction(listener.listener) ? - listener.listener : listener); - - if (!this._events[type]) - // Optimize the case of one listener. Don't need the extra array object. - this._events[type] = listener; - else if (isObject(this._events[type])) - // If we've already got an array, just append. - this._events[type].push(listener); - else - // Adding the second element, need to change to array. - this._events[type] = [this._events[type], listener]; - - // Check for listener leak - if (isObject(this._events[type]) && !this._events[type].warned) { - var m; - if (!isUndefined(this._maxListeners)) { - m = this._maxListeners; - } else { - m = EventEmitter.defaultMaxListeners; - } - - if (m && m > 0 && this._events[type].length > m) { - this._events[type].warned = true; - console.error('(node) warning: possible EventEmitter memory ' + - 'leak detected. %d listeners added. ' + - 'Use emitter.setMaxListeners() to increase limit.', - this._events[type].length); - if (typeof console.trace === 'function') { - // not supported in IE 10 - console.trace(); - } - } - } - - return this; -}; - -EventEmitter.prototype.on = EventEmitter.prototype.addListener; - -EventEmitter.prototype.once = function(type, listener) { - if (!isFunction(listener)) - throw TypeError('listener must be a function'); - - var fired = false; - - function g() { - this.removeListener(type, g); - - if (!fired) { - fired = true; - listener.apply(this, arguments); - } - } - - g.listener = listener; - this.on(type, g); - - return this; -}; - -// emits a 'removeListener' event iff the listener was removed -EventEmitter.prototype.removeListener = function(type, listener) { - var list, position, length, i; - - if (!isFunction(listener)) - throw TypeError('listener must be a function'); - - if (!this._events || !this._events[type]) - return this; - - list = this._events[type]; - length = list.length; - position = -1; - - if (list === listener || - (isFunction(list.listener) && list.listener === listener)) { - delete this._events[type]; - if (this._events.removeListener) - this.emit('removeListener', type, listener); - - } else if (isObject(list)) { - for (i = length; i-- > 0;) { - if (list[i] === listener || - (list[i].listener && list[i].listener === listener)) { - position = i; - break; - } - } - - if (position < 0) - return this; - - if (list.length === 1) { - list.length = 0; - delete this._events[type]; - } else { - list.splice(position, 1); - } - - if (this._events.removeListener) - this.emit('removeListener', type, listener); - } - - return this; -}; - -EventEmitter.prototype.removeAllListeners = function(type) { - var key, listeners; - - if (!this._events) - return this; - - // not listening for removeListener, no need to emit - if (!this._events.removeListener) { - if (arguments.length === 0) - this._events = {}; - else if (this._events[type]) - delete this._events[type]; - return this; - } - - // emit removeListener for all listeners on all events - if (arguments.length === 0) { - for (key in this._events) { - if (key === 'removeListener') continue; - this.removeAllListeners(key); - } - this.removeAllListeners('removeListener'); - this._events = {}; - return this; - } - - listeners = this._events[type]; - - if (isFunction(listeners)) { - this.removeListener(type, listeners); - } else { - // LIFO order - while (listeners.length) - this.removeListener(type, listeners[listeners.length - 1]); - } - delete this._events[type]; - - return this; -}; - -EventEmitter.prototype.listeners = function(type) { - var ret; - if (!this._events || !this._events[type]) - ret = []; - else if (isFunction(this._events[type])) - ret = [this._events[type]]; - else - ret = this._events[type].slice(); - return ret; -}; - -EventEmitter.listenerCount = function(emitter, type) { - var ret; - if (!emitter._events || !emitter._events[type]) - ret = 0; - else if (isFunction(emitter._events[type])) - ret = 1; - else - ret = emitter._events[type].length; - return ret; -}; - -function isFunction(arg) { - return typeof arg === 'function'; -} - -function isNumber(arg) { - return typeof arg === 'number'; -} - -function isObject(arg) { - return typeof arg === 'object' && arg !== null; -} - -function isUndefined(arg) { - return arg === void 0; -} - -},{}],15:[function(require,module,exports){ -(function (process){ -exports.alphasort = alphasort -exports.alphasorti = alphasorti -exports.setopts = setopts -exports.ownProp = ownProp -exports.makeAbs = makeAbs -exports.finish = finish -exports.mark = mark -exports.isIgnored = isIgnored -exports.childrenIgnored = childrenIgnored - -function ownProp (obj, field) { - return Object.prototype.hasOwnProperty.call(obj, field) -} - -var path = require("path") -var minimatch = require("minimatch") -var isAbsolute = require("path-is-absolute") -var Minimatch = minimatch.Minimatch - -function alphasorti (a, b) { - return a.toLowerCase().localeCompare(b.toLowerCase()) -} - -function alphasort (a, b) { - return a.localeCompare(b) -} - -function setupIgnores (self, options) { - self.ignore = options.ignore || [] - - if (!Array.isArray(self.ignore)) - self.ignore = [self.ignore] - - if (self.ignore.length) { - self.ignore = self.ignore.map(ignoreMap) - } -} - -function ignoreMap (pattern) { - var gmatcher = null - if (pattern.slice(-3) === '/**') { - var gpattern = pattern.replace(/(\/\*\*)+$/, '') - gmatcher = new Minimatch(gpattern) - } - - return { - matcher: new Minimatch(pattern), - gmatcher: gmatcher - } -} - -function setopts (self, pattern, options) { - if (!options) - options = {} - - // base-matching: just use globstar for that. - if (options.matchBase && -1 === pattern.indexOf("/")) { - if (options.noglobstar) { - throw new Error("base matching requires globstar") - } - pattern = "**/" + pattern - } - - self.silent = !!options.silent - self.pattern = pattern - self.strict = options.strict !== false - self.realpath = !!options.realpath - self.realpathCache = options.realpathCache || Object.create(null) - self.follow = !!options.follow - self.dot = !!options.dot - self.mark = !!options.mark - self.nodir = !!options.nodir - if (self.nodir) - self.mark = true - self.sync = !!options.sync - self.nounique = !!options.nounique - self.nonull = !!options.nonull - self.nosort = !!options.nosort - self.nocase = !!options.nocase - self.stat = !!options.stat - self.noprocess = !!options.noprocess - - self.maxLength = options.maxLength || Infinity - self.cache = options.cache || Object.create(null) - self.statCache = options.statCache || Object.create(null) - self.symlinks = options.symlinks || Object.create(null) - - setupIgnores(self, options) - - self.changedCwd = false - var cwd = process.cwd() - if (!ownProp(options, "cwd")) - self.cwd = cwd - else { - self.cwd = options.cwd - self.changedCwd = path.resolve(options.cwd) !== cwd - } - - self.root = options.root || path.resolve(self.cwd, "/") - self.root = path.resolve(self.root) - if (process.platform === "win32") - self.root = self.root.replace(/\\/g, "/") - - self.nomount = !!options.nomount - - // disable comments and negation unless the user explicitly - // passes in false as the option. - options.nonegate = options.nonegate === false ? false : true - options.nocomment = options.nocomment === false ? false : true - deprecationWarning(options) - - self.minimatch = new Minimatch(pattern, options) - self.options = self.minimatch.options -} - -// TODO(isaacs): remove entirely in v6 -// exported to reset in tests -exports.deprecationWarned -function deprecationWarning(options) { - if (!options.nonegate || !options.nocomment) { - if (process.noDeprecation !== true && !exports.deprecationWarned) { - var msg = 'glob WARNING: comments and negation will be disabled in v6' - if (process.throwDeprecation) - throw new Error(msg) - else if (process.traceDeprecation) - console.trace(msg) - else - console.error(msg) - - exports.deprecationWarned = true - } - } -} - -function finish (self) { - var nou = self.nounique - var all = nou ? [] : Object.create(null) - - for (var i = 0, l = self.matches.length; i < l; i ++) { - var matches = self.matches[i] - if (!matches || Object.keys(matches).length === 0) { - if (self.nonull) { - // do like the shell, and spit out the literal glob - var literal = self.minimatch.globSet[i] - if (nou) - all.push(literal) - else - all[literal] = true - } - } else { - // had matches - var m = Object.keys(matches) - if (nou) - all.push.apply(all, m) - else - m.forEach(function (m) { - all[m] = true - }) - } - } - - if (!nou) - all = Object.keys(all) - - if (!self.nosort) - all = all.sort(self.nocase ? alphasorti : alphasort) - - // at *some* point we statted all of these - if (self.mark) { - for (var i = 0; i < all.length; i++) { - all[i] = self._mark(all[i]) - } - if (self.nodir) { - all = all.filter(function (e) { - return !(/\/$/.test(e)) - }) - } - } - - if (self.ignore.length) - all = all.filter(function(m) { - return !isIgnored(self, m) - }) - - self.found = all -} - -function mark (self, p) { - var abs = makeAbs(self, p) - var c = self.cache[abs] - var m = p - if (c) { - var isDir = c === 'DIR' || Array.isArray(c) - var slash = p.slice(-1) === '/' - - if (isDir && !slash) - m += '/' - else if (!isDir && slash) - m = m.slice(0, -1) - - if (m !== p) { - var mabs = makeAbs(self, m) - self.statCache[mabs] = self.statCache[abs] - self.cache[mabs] = self.cache[abs] - } - } - - return m -} - -// lotta situps... -function makeAbs (self, f) { - var abs = f - if (f.charAt(0) === '/') { - abs = path.join(self.root, f) - } else if (isAbsolute(f) || f === '') { - abs = f - } else if (self.changedCwd) { - abs = path.resolve(self.cwd, f) - } else { - abs = path.resolve(f) - } - return abs -} - - -// Return true, if pattern ends with globstar '**', for the accompanying parent directory. -// Ex:- If node_modules/** is the pattern, add 'node_modules' to ignore list along with it's contents -function isIgnored (self, path) { - if (!self.ignore.length) - return false - - return self.ignore.some(function(item) { - return item.matcher.match(path) || !!(item.gmatcher && item.gmatcher.match(path)) - }) -} - -function childrenIgnored (self, path) { - if (!self.ignore.length) - return false - - return self.ignore.some(function(item) { - return !!(item.gmatcher && item.gmatcher.match(path)) - }) -} - -}).call(this,require('_process')) -},{"_process":24,"minimatch":20,"path":22,"path-is-absolute":23}],16:[function(require,module,exports){ -(function (process){ -// Approach: -// -// 1. Get the minimatch set -// 2. For each pattern in the set, PROCESS(pattern, false) -// 3. Store matches per-set, then uniq them -// -// PROCESS(pattern, inGlobStar) -// Get the first [n] items from pattern that are all strings -// Join these together. This is PREFIX. -// If there is no more remaining, then stat(PREFIX) and -// add to matches if it succeeds. END. -// -// If inGlobStar and PREFIX is symlink and points to dir -// set ENTRIES = [] -// else readdir(PREFIX) as ENTRIES -// If fail, END -// -// with ENTRIES -// If pattern[n] is GLOBSTAR -// // handle the case where the globstar match is empty -// // by pruning it out, and testing the resulting pattern -// PROCESS(pattern[0..n] + pattern[n+1 .. $], false) -// // handle other cases. -// for ENTRY in ENTRIES (not dotfiles) -// // attach globstar + tail onto the entry -// // Mark that this entry is a globstar match -// PROCESS(pattern[0..n] + ENTRY + pattern[n .. $], true) -// -// else // not globstar -// for ENTRY in ENTRIES (not dotfiles, unless pattern[n] is dot) -// Test ENTRY against pattern[n] -// If fails, continue -// If passes, PROCESS(pattern[0..n] + item + pattern[n+1 .. $]) -// -// Caveat: -// Cache all stats and readdirs results to minimize syscall. Since all -// we ever care about is existence and directory-ness, we can just keep -// `true` for files, and [children,...] for directories, or `false` for -// things that don't exist. - -module.exports = glob - -var fs = require('fs') -var minimatch = require('minimatch') -var Minimatch = minimatch.Minimatch -var inherits = require('inherits') -var EE = require('events').EventEmitter -var path = require('path') -var assert = require('assert') -var isAbsolute = require('path-is-absolute') -var globSync = require('./sync.js') -var common = require('./common.js') -var alphasort = common.alphasort -var alphasorti = common.alphasorti -var setopts = common.setopts -var ownProp = common.ownProp -var inflight = require('inflight') -var util = require('util') -var childrenIgnored = common.childrenIgnored -var isIgnored = common.isIgnored - -var once = require('once') - -function glob (pattern, options, cb) { - if (typeof options === 'function') cb = options, options = {} - if (!options) options = {} - - if (options.sync) { - if (cb) - throw new TypeError('callback provided to sync glob') - return globSync(pattern, options) - } - - return new Glob(pattern, options, cb) -} - -glob.sync = globSync -var GlobSync = glob.GlobSync = globSync.GlobSync - -// old api surface -glob.glob = glob - -glob.hasMagic = function (pattern, options_) { - var options = util._extend({}, options_) - options.noprocess = true - - var g = new Glob(pattern, options) - var set = g.minimatch.set - if (set.length > 1) - return true - - for (var j = 0; j < set[0].length; j++) { - if (typeof set[0][j] !== 'string') - return true - } - - return false -} - -glob.Glob = Glob -inherits(Glob, EE) -function Glob (pattern, options, cb) { - if (typeof options === 'function') { - cb = options - options = null - } - - if (options && options.sync) { - if (cb) - throw new TypeError('callback provided to sync glob') - return new GlobSync(pattern, options) - } - - if (!(this instanceof Glob)) - return new Glob(pattern, options, cb) - - setopts(this, pattern, options) - this._didRealPath = false - - // process each pattern in the minimatch set - var n = this.minimatch.set.length - - // The matches are stored as {: true,...} so that - // duplicates are automagically pruned. - // Later, we do an Object.keys() on these. - // Keep them as a list so we can fill in when nonull is set. - this.matches = new Array(n) - - if (typeof cb === 'function') { - cb = once(cb) - this.on('error', cb) - this.on('end', function (matches) { - cb(null, matches) - }) - } - - var self = this - var n = this.minimatch.set.length - this._processing = 0 - this.matches = new Array(n) - - this._emitQueue = [] - this._processQueue = [] - this.paused = false - - if (this.noprocess) - return this - - if (n === 0) - return done() - - for (var i = 0; i < n; i ++) { - this._process(this.minimatch.set[i], i, false, done) - } - - function done () { - --self._processing - if (self._processing <= 0) - self._finish() - } -} - -Glob.prototype._finish = function () { - assert(this instanceof Glob) - if (this.aborted) - return - - if (this.realpath && !this._didRealpath) - return this._realpath() - - common.finish(this) - this.emit('end', this.found) -} - -Glob.prototype._realpath = function () { - if (this._didRealpath) - return - - this._didRealpath = true - - var n = this.matches.length - if (n === 0) - return this._finish() - - var self = this - for (var i = 0; i < this.matches.length; i++) - this._realpathSet(i, next) - - function next () { - if (--n === 0) - self._finish() - } -} - -Glob.prototype._realpathSet = function (index, cb) { - var matchset = this.matches[index] - if (!matchset) - return cb() - - var found = Object.keys(matchset) - var self = this - var n = found.length - - if (n === 0) - return cb() - - var set = this.matches[index] = Object.create(null) - found.forEach(function (p, i) { - // If there's a problem with the stat, then it means that - // one or more of the links in the realpath couldn't be - // resolved. just return the abs value in that case. - p = self._makeAbs(p) - fs.realpath(p, self.realpathCache, function (er, real) { - if (!er) - set[real] = true - else if (er.syscall === 'stat') - set[p] = true - else - self.emit('error', er) // srsly wtf right here - - if (--n === 0) { - self.matches[index] = set - cb() - } - }) - }) -} - -Glob.prototype._mark = function (p) { - return common.mark(this, p) -} - -Glob.prototype._makeAbs = function (f) { - return common.makeAbs(this, f) -} - -Glob.prototype.abort = function () { - this.aborted = true - this.emit('abort') -} - -Glob.prototype.pause = function () { - if (!this.paused) { - this.paused = true - this.emit('pause') - } -} - -Glob.prototype.resume = function () { - if (this.paused) { - this.emit('resume') - this.paused = false - if (this._emitQueue.length) { - var eq = this._emitQueue.slice(0) - this._emitQueue.length = 0 - for (var i = 0; i < eq.length; i ++) { - var e = eq[i] - this._emitMatch(e[0], e[1]) - } - } - if (this._processQueue.length) { - var pq = this._processQueue.slice(0) - this._processQueue.length = 0 - for (var i = 0; i < pq.length; i ++) { - var p = pq[i] - this._processing-- - this._process(p[0], p[1], p[2], p[3]) - } - } - } -} - -Glob.prototype._process = function (pattern, index, inGlobStar, cb) { - assert(this instanceof Glob) - assert(typeof cb === 'function') - - if (this.aborted) - return - - this._processing++ - if (this.paused) { - this._processQueue.push([pattern, index, inGlobStar, cb]) - return - } - - //console.error('PROCESS %d', this._processing, pattern) - - // Get the first [n] parts of pattern that are all strings. - var n = 0 - while (typeof pattern[n] === 'string') { - n ++ - } - // now n is the index of the first one that is *not* a string. - - // see if there's anything else - var prefix - switch (n) { - // if not, then this is rather simple - case pattern.length: - this._processSimple(pattern.join('/'), index, cb) - return - - case 0: - // pattern *starts* with some non-trivial item. - // going to readdir(cwd), but not include the prefix in matches. - prefix = null - break - - default: - // pattern has some string bits in the front. - // whatever it starts with, whether that's 'absolute' like /foo/bar, - // or 'relative' like '../baz' - prefix = pattern.slice(0, n).join('/') - break - } - - var remain = pattern.slice(n) - - // get the list of entries. - var read - if (prefix === null) - read = '.' - else if (isAbsolute(prefix) || isAbsolute(pattern.join('/'))) { - if (!prefix || !isAbsolute(prefix)) - prefix = '/' + prefix - read = prefix - } else - read = prefix - - var abs = this._makeAbs(read) - - //if ignored, skip _processing - if (childrenIgnored(this, read)) - return cb() - - var isGlobStar = remain[0] === minimatch.GLOBSTAR - if (isGlobStar) - this._processGlobStar(prefix, read, abs, remain, index, inGlobStar, cb) - else - this._processReaddir(prefix, read, abs, remain, index, inGlobStar, cb) -} - -Glob.prototype._processReaddir = function (prefix, read, abs, remain, index, inGlobStar, cb) { - var self = this - this._readdir(abs, inGlobStar, function (er, entries) { - return self._processReaddir2(prefix, read, abs, remain, index, inGlobStar, entries, cb) - }) -} - -Glob.prototype._processReaddir2 = function (prefix, read, abs, remain, index, inGlobStar, entries, cb) { - - // if the abs isn't a dir, then nothing can match! - if (!entries) - return cb() - - // It will only match dot entries if it starts with a dot, or if - // dot is set. Stuff like @(.foo|.bar) isn't allowed. - var pn = remain[0] - var negate = !!this.minimatch.negate - var rawGlob = pn._glob - var dotOk = this.dot || rawGlob.charAt(0) === '.' - - var matchedEntries = [] - for (var i = 0; i < entries.length; i++) { - var e = entries[i] - if (e.charAt(0) !== '.' || dotOk) { - var m - if (negate && !prefix) { - m = !e.match(pn) - } else { - m = e.match(pn) - } - if (m) - matchedEntries.push(e) - } - } - - //console.error('prd2', prefix, entries, remain[0]._glob, matchedEntries) - - var len = matchedEntries.length - // If there are no matched entries, then nothing matches. - if (len === 0) - return cb() - - // if this is the last remaining pattern bit, then no need for - // an additional stat *unless* the user has specified mark or - // stat explicitly. We know they exist, since readdir returned - // them. - - if (remain.length === 1 && !this.mark && !this.stat) { - if (!this.matches[index]) - this.matches[index] = Object.create(null) - - for (var i = 0; i < len; i ++) { - var e = matchedEntries[i] - if (prefix) { - if (prefix !== '/') - e = prefix + '/' + e - else - e = prefix + e - } - - if (e.charAt(0) === '/' && !this.nomount) { - e = path.join(this.root, e) - } - this._emitMatch(index, e) - } - // This was the last one, and no stats were needed - return cb() - } - - // now test all matched entries as stand-ins for that part - // of the pattern. - remain.shift() - for (var i = 0; i < len; i ++) { - var e = matchedEntries[i] - var newPattern - if (prefix) { - if (prefix !== '/') - e = prefix + '/' + e - else - e = prefix + e - } - this._process([e].concat(remain), index, inGlobStar, cb) - } - cb() -} - -Glob.prototype._emitMatch = function (index, e) { - if (this.aborted) - return - - if (this.matches[index][e]) - return - - if (isIgnored(this, e)) - return - - if (this.paused) { - this._emitQueue.push([index, e]) - return - } - - var abs = this._makeAbs(e) - - if (this.nodir) { - var c = this.cache[abs] - if (c === 'DIR' || Array.isArray(c)) - return - } - - if (this.mark) - e = this._mark(e) - - this.matches[index][e] = true - - var st = this.statCache[abs] - if (st) - this.emit('stat', e, st) - - this.emit('match', e) -} - -Glob.prototype._readdirInGlobStar = function (abs, cb) { - if (this.aborted) - return - - // follow all symlinked directories forever - // just proceed as if this is a non-globstar situation - if (this.follow) - return this._readdir(abs, false, cb) - - var lstatkey = 'lstat\0' + abs - var self = this - var lstatcb = inflight(lstatkey, lstatcb_) - - if (lstatcb) - fs.lstat(abs, lstatcb) - - function lstatcb_ (er, lstat) { - if (er) - return cb() - - var isSym = lstat.isSymbolicLink() - self.symlinks[abs] = isSym - - // If it's not a symlink or a dir, then it's definitely a regular file. - // don't bother doing a readdir in that case. - if (!isSym && !lstat.isDirectory()) { - self.cache[abs] = 'FILE' - cb() - } else - self._readdir(abs, false, cb) - } -} - -Glob.prototype._readdir = function (abs, inGlobStar, cb) { - if (this.aborted) - return - - cb = inflight('readdir\0'+abs+'\0'+inGlobStar, cb) - if (!cb) - return - - //console.error('RD %j %j', +inGlobStar, abs) - if (inGlobStar && !ownProp(this.symlinks, abs)) - return this._readdirInGlobStar(abs, cb) - - if (ownProp(this.cache, abs)) { - var c = this.cache[abs] - if (!c || c === 'FILE') - return cb() - - if (Array.isArray(c)) - return cb(null, c) - } - - var self = this - fs.readdir(abs, readdirCb(this, abs, cb)) -} - -function readdirCb (self, abs, cb) { - return function (er, entries) { - if (er) - self._readdirError(abs, er, cb) - else - self._readdirEntries(abs, entries, cb) - } -} - -Glob.prototype._readdirEntries = function (abs, entries, cb) { - if (this.aborted) - return - - // if we haven't asked to stat everything, then just - // assume that everything in there exists, so we can avoid - // having to stat it a second time. - if (!this.mark && !this.stat) { - for (var i = 0; i < entries.length; i ++) { - var e = entries[i] - if (abs === '/') - e = abs + e - else - e = abs + '/' + e - this.cache[e] = true - } - } - - this.cache[abs] = entries - return cb(null, entries) -} - -Glob.prototype._readdirError = function (f, er, cb) { - if (this.aborted) - return - - // handle errors, and cache the information - switch (er.code) { - case 'ENOTSUP': // https://github.com/isaacs/node-glob/issues/205 - case 'ENOTDIR': // totally normal. means it *does* exist. - this.cache[this._makeAbs(f)] = 'FILE' - break - - case 'ENOENT': // not terribly unusual - case 'ELOOP': - case 'ENAMETOOLONG': - case 'UNKNOWN': - this.cache[this._makeAbs(f)] = false - break - - default: // some unusual error. Treat as failure. - this.cache[this._makeAbs(f)] = false - if (this.strict) { - this.emit('error', er) - // If the error is handled, then we abort - // if not, we threw out of here - this.abort() - } - if (!this.silent) - console.error('glob error', er) - break - } - - return cb() -} - -Glob.prototype._processGlobStar = function (prefix, read, abs, remain, index, inGlobStar, cb) { - var self = this - this._readdir(abs, inGlobStar, function (er, entries) { - self._processGlobStar2(prefix, read, abs, remain, index, inGlobStar, entries, cb) - }) -} - - -Glob.prototype._processGlobStar2 = function (prefix, read, abs, remain, index, inGlobStar, entries, cb) { - //console.error('pgs2', prefix, remain[0], entries) - - // no entries means not a dir, so it can never have matches - // foo.txt/** doesn't match foo.txt - if (!entries) - return cb() - - // test without the globstar, and with every child both below - // and replacing the globstar. - var remainWithoutGlobStar = remain.slice(1) - var gspref = prefix ? [ prefix ] : [] - var noGlobStar = gspref.concat(remainWithoutGlobStar) - - // the noGlobStar pattern exits the inGlobStar state - this._process(noGlobStar, index, false, cb) - - var isSym = this.symlinks[abs] - var len = entries.length - - // If it's a symlink, and we're in a globstar, then stop - if (isSym && inGlobStar) - return cb() - - for (var i = 0; i < len; i++) { - var e = entries[i] - if (e.charAt(0) === '.' && !this.dot) - continue - - // these two cases enter the inGlobStar state - var instead = gspref.concat(entries[i], remainWithoutGlobStar) - this._process(instead, index, true, cb) - - var below = gspref.concat(entries[i], remain) - this._process(below, index, true, cb) - } - - cb() -} - -Glob.prototype._processSimple = function (prefix, index, cb) { - // XXX review this. Shouldn't it be doing the mounting etc - // before doing stat? kinda weird? - var self = this - this._stat(prefix, function (er, exists) { - self._processSimple2(prefix, index, er, exists, cb) - }) -} -Glob.prototype._processSimple2 = function (prefix, index, er, exists, cb) { - - //console.error('ps2', prefix, exists) - - if (!this.matches[index]) - this.matches[index] = Object.create(null) - - // If it doesn't exist, then just mark the lack of results - if (!exists) - return cb() - - if (prefix && isAbsolute(prefix) && !this.nomount) { - var trail = /[\/\\]$/.test(prefix) - if (prefix.charAt(0) === '/') { - prefix = path.join(this.root, prefix) - } else { - prefix = path.resolve(this.root, prefix) - if (trail) - prefix += '/' - } - } - - if (process.platform === 'win32') - prefix = prefix.replace(/\\/g, '/') - - // Mark this as a match - this._emitMatch(index, prefix) - cb() -} - -// Returns either 'DIR', 'FILE', or false -Glob.prototype._stat = function (f, cb) { - var abs = this._makeAbs(f) - var needDir = f.slice(-1) === '/' - - if (f.length > this.maxLength) - return cb() - - if (!this.stat && ownProp(this.cache, abs)) { - var c = this.cache[abs] - - if (Array.isArray(c)) - c = 'DIR' - - // It exists, but maybe not how we need it - if (!needDir || c === 'DIR') - return cb(null, c) - - if (needDir && c === 'FILE') - return cb() - - // otherwise we have to stat, because maybe c=true - // if we know it exists, but not what it is. - } - - var exists - var stat = this.statCache[abs] - if (stat !== undefined) { - if (stat === false) - return cb(null, stat) - else { - var type = stat.isDirectory() ? 'DIR' : 'FILE' - if (needDir && type === 'FILE') - return cb() - else - return cb(null, type, stat) - } - } - - var self = this - var statcb = inflight('stat\0' + abs, lstatcb_) - if (statcb) - fs.lstat(abs, statcb) - - function lstatcb_ (er, lstat) { - if (lstat && lstat.isSymbolicLink()) { - // If it's a symlink, then treat it as the target, unless - // the target does not exist, then treat it as a file. - return fs.stat(abs, function (er, stat) { - if (er) - self._stat2(f, abs, null, lstat, cb) - else - self._stat2(f, abs, er, stat, cb) - }) - } else { - self._stat2(f, abs, er, lstat, cb) - } - } -} - -Glob.prototype._stat2 = function (f, abs, er, stat, cb) { - if (er) { - this.statCache[abs] = false - return cb() - } - - var needDir = f.slice(-1) === '/' - this.statCache[abs] = stat - - if (abs.slice(-1) === '/' && !stat.isDirectory()) - return cb(null, false, stat) - - var c = stat.isDirectory() ? 'DIR' : 'FILE' - this.cache[abs] = this.cache[abs] || c - - if (needDir && c !== 'DIR') - return cb() - - return cb(null, c, stat) -} - -}).call(this,require('_process')) -},{"./common.js":15,"./sync.js":17,"_process":24,"assert":9,"events":14,"fs":12,"inflight":18,"inherits":19,"minimatch":20,"once":21,"path":22,"path-is-absolute":23,"util":28}],17:[function(require,module,exports){ -(function (process){ -module.exports = globSync -globSync.GlobSync = GlobSync - -var fs = require('fs') -var minimatch = require('minimatch') -var Minimatch = minimatch.Minimatch -var Glob = require('./glob.js').Glob -var util = require('util') -var path = require('path') -var assert = require('assert') -var isAbsolute = require('path-is-absolute') -var common = require('./common.js') -var alphasort = common.alphasort -var alphasorti = common.alphasorti -var setopts = common.setopts -var ownProp = common.ownProp -var childrenIgnored = common.childrenIgnored - -function globSync (pattern, options) { - if (typeof options === 'function' || arguments.length === 3) - throw new TypeError('callback provided to sync glob\n'+ - 'See: https://github.com/isaacs/node-glob/issues/167') - - return new GlobSync(pattern, options).found -} - -function GlobSync (pattern, options) { - if (!pattern) - throw new Error('must provide pattern') - - if (typeof options === 'function' || arguments.length === 3) - throw new TypeError('callback provided to sync glob\n'+ - 'See: https://github.com/isaacs/node-glob/issues/167') - - if (!(this instanceof GlobSync)) - return new GlobSync(pattern, options) - - setopts(this, pattern, options) - - if (this.noprocess) - return this - - var n = this.minimatch.set.length - this.matches = new Array(n) - for (var i = 0; i < n; i ++) { - this._process(this.minimatch.set[i], i, false) - } - this._finish() -} - -GlobSync.prototype._finish = function () { - assert(this instanceof GlobSync) - if (this.realpath) { - var self = this - this.matches.forEach(function (matchset, index) { - var set = self.matches[index] = Object.create(null) - for (var p in matchset) { - try { - p = self._makeAbs(p) - var real = fs.realpathSync(p, self.realpathCache) - set[real] = true - } catch (er) { - if (er.syscall === 'stat') - set[self._makeAbs(p)] = true - else - throw er - } - } - }) - } - common.finish(this) -} - - -GlobSync.prototype._process = function (pattern, index, inGlobStar) { - assert(this instanceof GlobSync) - - // Get the first [n] parts of pattern that are all strings. - var n = 0 - while (typeof pattern[n] === 'string') { - n ++ - } - // now n is the index of the first one that is *not* a string. - - // See if there's anything else - var prefix - switch (n) { - // if not, then this is rather simple - case pattern.length: - this._processSimple(pattern.join('/'), index) - return - - case 0: - // pattern *starts* with some non-trivial item. - // going to readdir(cwd), but not include the prefix in matches. - prefix = null - break - - default: - // pattern has some string bits in the front. - // whatever it starts with, whether that's 'absolute' like /foo/bar, - // or 'relative' like '../baz' - prefix = pattern.slice(0, n).join('/') - break - } - - var remain = pattern.slice(n) - - // get the list of entries. - var read - if (prefix === null) - read = '.' - else if (isAbsolute(prefix) || isAbsolute(pattern.join('/'))) { - if (!prefix || !isAbsolute(prefix)) - prefix = '/' + prefix - read = prefix - } else - read = prefix - - var abs = this._makeAbs(read) - - //if ignored, skip processing - if (childrenIgnored(this, read)) - return - - var isGlobStar = remain[0] === minimatch.GLOBSTAR - if (isGlobStar) - this._processGlobStar(prefix, read, abs, remain, index, inGlobStar) - else - this._processReaddir(prefix, read, abs, remain, index, inGlobStar) -} - - -GlobSync.prototype._processReaddir = function (prefix, read, abs, remain, index, inGlobStar) { - var entries = this._readdir(abs, inGlobStar) - - // if the abs isn't a dir, then nothing can match! - if (!entries) - return - - // It will only match dot entries if it starts with a dot, or if - // dot is set. Stuff like @(.foo|.bar) isn't allowed. - var pn = remain[0] - var negate = !!this.minimatch.negate - var rawGlob = pn._glob - var dotOk = this.dot || rawGlob.charAt(0) === '.' - - var matchedEntries = [] - for (var i = 0; i < entries.length; i++) { - var e = entries[i] - if (e.charAt(0) !== '.' || dotOk) { - var m - if (negate && !prefix) { - m = !e.match(pn) - } else { - m = e.match(pn) - } - if (m) - matchedEntries.push(e) - } - } - - var len = matchedEntries.length - // If there are no matched entries, then nothing matches. - if (len === 0) - return - - // if this is the last remaining pattern bit, then no need for - // an additional stat *unless* the user has specified mark or - // stat explicitly. We know they exist, since readdir returned - // them. - - if (remain.length === 1 && !this.mark && !this.stat) { - if (!this.matches[index]) - this.matches[index] = Object.create(null) - - for (var i = 0; i < len; i ++) { - var e = matchedEntries[i] - if (prefix) { - if (prefix.slice(-1) !== '/') - e = prefix + '/' + e - else - e = prefix + e - } - - if (e.charAt(0) === '/' && !this.nomount) { - e = path.join(this.root, e) - } - this.matches[index][e] = true - } - // This was the last one, and no stats were needed - return - } - - // now test all matched entries as stand-ins for that part - // of the pattern. - remain.shift() - for (var i = 0; i < len; i ++) { - var e = matchedEntries[i] - var newPattern - if (prefix) - newPattern = [prefix, e] - else - newPattern = [e] - this._process(newPattern.concat(remain), index, inGlobStar) - } -} - - -GlobSync.prototype._emitMatch = function (index, e) { - var abs = this._makeAbs(e) - if (this.mark) - e = this._mark(e) - - if (this.matches[index][e]) - return - - if (this.nodir) { - var c = this.cache[this._makeAbs(e)] - if (c === 'DIR' || Array.isArray(c)) - return - } - - this.matches[index][e] = true - if (this.stat) - this._stat(e) -} - - -GlobSync.prototype._readdirInGlobStar = function (abs) { - // follow all symlinked directories forever - // just proceed as if this is a non-globstar situation - if (this.follow) - return this._readdir(abs, false) - - var entries - var lstat - var stat - try { - lstat = fs.lstatSync(abs) - } catch (er) { - // lstat failed, doesn't exist - return null - } - - var isSym = lstat.isSymbolicLink() - this.symlinks[abs] = isSym - - // If it's not a symlink or a dir, then it's definitely a regular file. - // don't bother doing a readdir in that case. - if (!isSym && !lstat.isDirectory()) - this.cache[abs] = 'FILE' - else - entries = this._readdir(abs, false) - - return entries -} - -GlobSync.prototype._readdir = function (abs, inGlobStar) { - var entries - - if (inGlobStar && !ownProp(this.symlinks, abs)) - return this._readdirInGlobStar(abs) - - if (ownProp(this.cache, abs)) { - var c = this.cache[abs] - if (!c || c === 'FILE') - return null - - if (Array.isArray(c)) - return c - } - - try { - return this._readdirEntries(abs, fs.readdirSync(abs)) - } catch (er) { - this._readdirError(abs, er) - return null - } -} - -GlobSync.prototype._readdirEntries = function (abs, entries) { - // if we haven't asked to stat everything, then just - // assume that everything in there exists, so we can avoid - // having to stat it a second time. - if (!this.mark && !this.stat) { - for (var i = 0; i < entries.length; i ++) { - var e = entries[i] - if (abs === '/') - e = abs + e - else - e = abs + '/' + e - this.cache[e] = true - } - } - - this.cache[abs] = entries - - // mark and cache dir-ness - return entries -} - -GlobSync.prototype._readdirError = function (f, er) { - // handle errors, and cache the information - switch (er.code) { - case 'ENOTSUP': // https://github.com/isaacs/node-glob/issues/205 - case 'ENOTDIR': // totally normal. means it *does* exist. - this.cache[this._makeAbs(f)] = 'FILE' - break - - case 'ENOENT': // not terribly unusual - case 'ELOOP': - case 'ENAMETOOLONG': - case 'UNKNOWN': - this.cache[this._makeAbs(f)] = false - break - - default: // some unusual error. Treat as failure. - this.cache[this._makeAbs(f)] = false - if (this.strict) - throw er - if (!this.silent) - console.error('glob error', er) - break - } -} - -GlobSync.prototype._processGlobStar = function (prefix, read, abs, remain, index, inGlobStar) { - - var entries = this._readdir(abs, inGlobStar) - - // no entries means not a dir, so it can never have matches - // foo.txt/** doesn't match foo.txt - if (!entries) - return - - // test without the globstar, and with every child both below - // and replacing the globstar. - var remainWithoutGlobStar = remain.slice(1) - var gspref = prefix ? [ prefix ] : [] - var noGlobStar = gspref.concat(remainWithoutGlobStar) - - // the noGlobStar pattern exits the inGlobStar state - this._process(noGlobStar, index, false) - - var len = entries.length - var isSym = this.symlinks[abs] - - // If it's a symlink, and we're in a globstar, then stop - if (isSym && inGlobStar) - return - - for (var i = 0; i < len; i++) { - var e = entries[i] - if (e.charAt(0) === '.' && !this.dot) - continue - - // these two cases enter the inGlobStar state - var instead = gspref.concat(entries[i], remainWithoutGlobStar) - this._process(instead, index, true) - - var below = gspref.concat(entries[i], remain) - this._process(below, index, true) - } -} - -GlobSync.prototype._processSimple = function (prefix, index) { - // XXX review this. Shouldn't it be doing the mounting etc - // before doing stat? kinda weird? - var exists = this._stat(prefix) - - if (!this.matches[index]) - this.matches[index] = Object.create(null) - - // If it doesn't exist, then just mark the lack of results - if (!exists) - return - - if (prefix && isAbsolute(prefix) && !this.nomount) { - var trail = /[\/\\]$/.test(prefix) - if (prefix.charAt(0) === '/') { - prefix = path.join(this.root, prefix) - } else { - prefix = path.resolve(this.root, prefix) - if (trail) - prefix += '/' - } - } - - if (process.platform === 'win32') - prefix = prefix.replace(/\\/g, '/') - - // Mark this as a match - this.matches[index][prefix] = true -} - -// Returns either 'DIR', 'FILE', or false -GlobSync.prototype._stat = function (f) { - var abs = this._makeAbs(f) - var needDir = f.slice(-1) === '/' - - if (f.length > this.maxLength) - return false - - if (!this.stat && ownProp(this.cache, abs)) { - var c = this.cache[abs] - - if (Array.isArray(c)) - c = 'DIR' - - // It exists, but maybe not how we need it - if (!needDir || c === 'DIR') - return c - - if (needDir && c === 'FILE') - return false - - // otherwise we have to stat, because maybe c=true - // if we know it exists, but not what it is. - } - - var exists - var stat = this.statCache[abs] - if (!stat) { - var lstat - try { - lstat = fs.lstatSync(abs) - } catch (er) { - return false - } - - if (lstat.isSymbolicLink()) { - try { - stat = fs.statSync(abs) - } catch (er) { - stat = lstat - } - } else { - stat = lstat - } - } - - this.statCache[abs] = stat - - var c = stat.isDirectory() ? 'DIR' : 'FILE' - this.cache[abs] = this.cache[abs] || c - - if (needDir && c !== 'DIR') - return false - - return c -} - -GlobSync.prototype._mark = function (p) { - return common.mark(this, p) -} - -GlobSync.prototype._makeAbs = function (f) { - return common.makeAbs(this, f) -} - -}).call(this,require('_process')) -},{"./common.js":15,"./glob.js":16,"_process":24,"assert":9,"fs":12,"minimatch":20,"path":22,"path-is-absolute":23,"util":28}],18:[function(require,module,exports){ -(function (process){ -var wrappy = require('wrappy') -var reqs = Object.create(null) -var once = require('once') - -module.exports = wrappy(inflight) - -function inflight (key, cb) { - if (reqs[key]) { - reqs[key].push(cb) - return null - } else { - reqs[key] = [cb] - return makeres(key) - } -} - -function makeres (key) { - return once(function RES () { - var cbs = reqs[key] - var len = cbs.length - var args = slice(arguments) - - // XXX It's somewhat ambiguous whether a new callback added in this - // pass should be queued for later execution if something in the - // list of callbacks throws, or if it should just be discarded. - // However, it's such an edge case that it hardly matters, and either - // choice is likely as surprising as the other. - // As it happens, we do go ahead and schedule it for later execution. - try { - for (var i = 0; i < len; i++) { - cbs[i].apply(null, args) - } - } finally { - if (cbs.length > len) { - // added more in the interim. - // de-zalgo, just in case, but don't call again. - cbs.splice(0, len) - process.nextTick(function () { - RES.apply(null, args) - }) - } else { - delete reqs[key] - } - } - }) -} - -function slice (args) { - var length = args.length - var array = [] - - for (var i = 0; i < length; i++) array[i] = args[i] - return array -} - -}).call(this,require('_process')) -},{"_process":24,"once":21,"wrappy":29}],19:[function(require,module,exports){ -if (typeof Object.create === 'function') { - // implementation from standard node.js 'util' module - module.exports = function inherits(ctor, superCtor) { - ctor.super_ = superCtor - ctor.prototype = Object.create(superCtor.prototype, { - constructor: { - value: ctor, - enumerable: false, - writable: true, - configurable: true - } - }); - }; -} else { - // old school shim for old browsers - module.exports = function inherits(ctor, superCtor) { - ctor.super_ = superCtor - var TempCtor = function () {} - TempCtor.prototype = superCtor.prototype - ctor.prototype = new TempCtor() - ctor.prototype.constructor = ctor - } -} - -},{}],20:[function(require,module,exports){ -module.exports = minimatch -minimatch.Minimatch = Minimatch - -var path = { sep: '/' } -try { - path = require('path') -} catch (er) {} - -var GLOBSTAR = minimatch.GLOBSTAR = Minimatch.GLOBSTAR = {} -var expand = require('brace-expansion') - -var plTypes = { - '!': { open: '(?:(?!(?:', close: '))[^/]*?)'}, - '?': { open: '(?:', close: ')?' }, - '+': { open: '(?:', close: ')+' }, - '*': { open: '(?:', close: ')*' }, - '@': { open: '(?:', close: ')' } -} - -// any single thing other than / -// don't need to escape / when using new RegExp() -var qmark = '[^/]' - -// * => any number of characters -var star = qmark + '*?' - -// ** when dots are allowed. Anything goes, except .. and . -// not (^ or / followed by one or two dots followed by $ or /), -// followed by anything, any number of times. -var twoStarDot = '(?:(?!(?:\\\/|^)(?:\\.{1,2})($|\\\/)).)*?' - -// not a ^ or / followed by a dot, -// followed by anything, any number of times. -var twoStarNoDot = '(?:(?!(?:\\\/|^)\\.).)*?' - -// characters that need to be escaped in RegExp. -var reSpecials = charSet('().*{}+?[]^$\\!') - -// "abc" -> { a:true, b:true, c:true } -function charSet (s) { - return s.split('').reduce(function (set, c) { - set[c] = true - return set - }, {}) -} - -// normalizes slashes. -var slashSplit = /\/+/ - -minimatch.filter = filter -function filter (pattern, options) { - options = options || {} - return function (p, i, list) { - return minimatch(p, pattern, options) - } -} - -function ext (a, b) { - a = a || {} - b = b || {} - var t = {} - Object.keys(b).forEach(function (k) { - t[k] = b[k] - }) - Object.keys(a).forEach(function (k) { - t[k] = a[k] - }) - return t -} - -minimatch.defaults = function (def) { - if (!def || !Object.keys(def).length) return minimatch - - var orig = minimatch - - var m = function minimatch (p, pattern, options) { - return orig.minimatch(p, pattern, ext(def, options)) - } - - m.Minimatch = function Minimatch (pattern, options) { - return new orig.Minimatch(pattern, ext(def, options)) - } - - return m -} - -Minimatch.defaults = function (def) { - if (!def || !Object.keys(def).length) return Minimatch - return minimatch.defaults(def).Minimatch -} - -function minimatch (p, pattern, options) { - if (typeof pattern !== 'string') { - throw new TypeError('glob pattern string required') - } - - if (!options) options = {} - - // shortcut: comments match nothing. - if (!options.nocomment && pattern.charAt(0) === '#') { - return false - } - - // "" only matches "" - if (pattern.trim() === '') return p === '' - - return new Minimatch(pattern, options).match(p) -} - -function Minimatch (pattern, options) { - if (!(this instanceof Minimatch)) { - return new Minimatch(pattern, options) - } - - if (typeof pattern !== 'string') { - throw new TypeError('glob pattern string required') - } - - if (!options) options = {} - pattern = pattern.trim() - - // windows support: need to use /, not \ - if (path.sep !== '/') { - pattern = pattern.split(path.sep).join('/') - } - - this.options = options - this.set = [] - this.pattern = pattern - this.regexp = null - this.negate = false - this.comment = false - this.empty = false - - // make the set of regexps etc. - this.make() -} - -Minimatch.prototype.debug = function () {} - -Minimatch.prototype.make = make -function make () { - // don't do it more than once. - if (this._made) return - - var pattern = this.pattern - var options = this.options - - // empty patterns and comments match nothing. - if (!options.nocomment && pattern.charAt(0) === '#') { - this.comment = true - return - } - if (!pattern) { - this.empty = true - return - } - - // step 1: figure out negation, etc. - this.parseNegate() - - // step 2: expand braces - var set = this.globSet = this.braceExpand() - - if (options.debug) this.debug = console.error - - this.debug(this.pattern, set) - - // step 3: now we have a set, so turn each one into a series of path-portion - // matching patterns. - // These will be regexps, except in the case of "**", which is - // set to the GLOBSTAR object for globstar behavior, - // and will not contain any / characters - set = this.globParts = set.map(function (s) { - return s.split(slashSplit) - }) - - this.debug(this.pattern, set) - - // glob --> regexps - set = set.map(function (s, si, set) { - return s.map(this.parse, this) - }, this) - - this.debug(this.pattern, set) - - // filter out everything that didn't compile properly. - set = set.filter(function (s) { - return s.indexOf(false) === -1 - }) - - this.debug(this.pattern, set) - - this.set = set -} - -Minimatch.prototype.parseNegate = parseNegate -function parseNegate () { - var pattern = this.pattern - var negate = false - var options = this.options - var negateOffset = 0 - - if (options.nonegate) return - - for (var i = 0, l = pattern.length - ; i < l && pattern.charAt(i) === '!' - ; i++) { - negate = !negate - negateOffset++ - } - - if (negateOffset) this.pattern = pattern.substr(negateOffset) - this.negate = negate -} - -// Brace expansion: -// a{b,c}d -> abd acd -// a{b,}c -> abc ac -// a{0..3}d -> a0d a1d a2d a3d -// a{b,c{d,e}f}g -> abg acdfg acefg -// a{b,c}d{e,f}g -> abdeg acdeg abdeg abdfg -// -// Invalid sets are not expanded. -// a{2..}b -> a{2..}b -// a{b}c -> a{b}c -minimatch.braceExpand = function (pattern, options) { - return braceExpand(pattern, options) -} - -Minimatch.prototype.braceExpand = braceExpand - -function braceExpand (pattern, options) { - if (!options) { - if (this instanceof Minimatch) { - options = this.options - } else { - options = {} - } - } - - pattern = typeof pattern === 'undefined' - ? this.pattern : pattern - - if (typeof pattern === 'undefined') { - throw new TypeError('undefined pattern') - } - - if (options.nobrace || - !pattern.match(/\{.*\}/)) { - // shortcut. no need to expand. - return [pattern] - } - - return expand(pattern) -} - -// parse a component of the expanded set. -// At this point, no pattern may contain "/" in it -// so we're going to return a 2d array, where each entry is the full -// pattern, split on '/', and then turned into a regular expression. -// A regexp is made at the end which joins each array with an -// escaped /, and another full one which joins each regexp with |. -// -// Following the lead of Bash 4.1, note that "**" only has special meaning -// when it is the *only* thing in a path portion. Otherwise, any series -// of * is equivalent to a single *. Globstar behavior is enabled by -// default, and can be disabled by setting options.noglobstar. -Minimatch.prototype.parse = parse -var SUBPARSE = {} -function parse (pattern, isSub) { - if (pattern.length > 1024 * 64) { - throw new TypeError('pattern is too long') - } - - var options = this.options - - // shortcuts - if (!options.noglobstar && pattern === '**') return GLOBSTAR - if (pattern === '') return '' - - var re = '' - var hasMagic = !!options.nocase - var escaping = false - // ? => one single character - var patternListStack = [] - var negativeLists = [] - var stateChar - var inClass = false - var reClassStart = -1 - var classStart = -1 - // . and .. never match anything that doesn't start with ., - // even when options.dot is set. - var patternStart = pattern.charAt(0) === '.' ? '' // anything - // not (start or / followed by . or .. followed by / or end) - : options.dot ? '(?!(?:^|\\\/)\\.{1,2}(?:$|\\\/))' - : '(?!\\.)' - var self = this - - function clearStateChar () { - if (stateChar) { - // we had some state-tracking character - // that wasn't consumed by this pass. - switch (stateChar) { - case '*': - re += star - hasMagic = true - break - case '?': - re += qmark - hasMagic = true - break - default: - re += '\\' + stateChar - break - } - self.debug('clearStateChar %j %j', stateChar, re) - stateChar = false - } - } - - for (var i = 0, len = pattern.length, c - ; (i < len) && (c = pattern.charAt(i)) - ; i++) { - this.debug('%s\t%s %s %j', pattern, i, re, c) - - // skip over any that are escaped. - if (escaping && reSpecials[c]) { - re += '\\' + c - escaping = false - continue - } - - switch (c) { - case '/': - // completely not allowed, even escaped. - // Should already be path-split by now. - return false - - case '\\': - clearStateChar() - escaping = true - continue - - // the various stateChar values - // for the "extglob" stuff. - case '?': - case '*': - case '+': - case '@': - case '!': - this.debug('%s\t%s %s %j <-- stateChar', pattern, i, re, c) - - // all of those are literals inside a class, except that - // the glob [!a] means [^a] in regexp - if (inClass) { - this.debug(' in class') - if (c === '!' && i === classStart + 1) c = '^' - re += c - continue - } - - // if we already have a stateChar, then it means - // that there was something like ** or +? in there. - // Handle the stateChar, then proceed with this one. - self.debug('call clearStateChar %j', stateChar) - clearStateChar() - stateChar = c - // if extglob is disabled, then +(asdf|foo) isn't a thing. - // just clear the statechar *now*, rather than even diving into - // the patternList stuff. - if (options.noext) clearStateChar() - continue - - case '(': - if (inClass) { - re += '(' - continue - } - - if (!stateChar) { - re += '\\(' - continue - } - - patternListStack.push({ - type: stateChar, - start: i - 1, - reStart: re.length, - open: plTypes[stateChar].open, - close: plTypes[stateChar].close - }) - // negation is (?:(?!js)[^/]*) - re += stateChar === '!' ? '(?:(?!(?:' : '(?:' - this.debug('plType %j %j', stateChar, re) - stateChar = false - continue - - case ')': - if (inClass || !patternListStack.length) { - re += '\\)' - continue - } - - clearStateChar() - hasMagic = true - var pl = patternListStack.pop() - // negation is (?:(?!js)[^/]*) - // The others are (?:) - re += pl.close - if (pl.type === '!') { - negativeLists.push(pl) - } - pl.reEnd = re.length - continue - - case '|': - if (inClass || !patternListStack.length || escaping) { - re += '\\|' - escaping = false - continue - } - - clearStateChar() - re += '|' - continue - - // these are mostly the same in regexp and glob - case '[': - // swallow any state-tracking char before the [ - clearStateChar() - - if (inClass) { - re += '\\' + c - continue - } - - inClass = true - classStart = i - reClassStart = re.length - re += c - continue - - case ']': - // a right bracket shall lose its special - // meaning and represent itself in - // a bracket expression if it occurs - // first in the list. -- POSIX.2 2.8.3.2 - if (i === classStart + 1 || !inClass) { - re += '\\' + c - escaping = false - continue - } - - // handle the case where we left a class open. - // "[z-a]" is valid, equivalent to "\[z-a\]" - if (inClass) { - // split where the last [ was, make sure we don't have - // an invalid re. if so, re-walk the contents of the - // would-be class to re-translate any characters that - // were passed through as-is - // TODO: It would probably be faster to determine this - // without a try/catch and a new RegExp, but it's tricky - // to do safely. For now, this is safe and works. - var cs = pattern.substring(classStart + 1, i) - try { - RegExp('[' + cs + ']') - } catch (er) { - // not a valid class! - var sp = this.parse(cs, SUBPARSE) - re = re.substr(0, reClassStart) + '\\[' + sp[0] + '\\]' - hasMagic = hasMagic || sp[1] - inClass = false - continue - } - } - - // finish up the class. - hasMagic = true - inClass = false - re += c - continue - - default: - // swallow any state char that wasn't consumed - clearStateChar() - - if (escaping) { - // no need - escaping = false - } else if (reSpecials[c] - && !(c === '^' && inClass)) { - re += '\\' - } - - re += c - - } // switch - } // for - - // handle the case where we left a class open. - // "[abc" is valid, equivalent to "\[abc" - if (inClass) { - // split where the last [ was, and escape it - // this is a huge pita. We now have to re-walk - // the contents of the would-be class to re-translate - // any characters that were passed through as-is - cs = pattern.substr(classStart + 1) - sp = this.parse(cs, SUBPARSE) - re = re.substr(0, reClassStart) + '\\[' + sp[0] - hasMagic = hasMagic || sp[1] - } - - // handle the case where we had a +( thing at the *end* - // of the pattern. - // each pattern list stack adds 3 chars, and we need to go through - // and escape any | chars that were passed through as-is for the regexp. - // Go through and escape them, taking care not to double-escape any - // | chars that were already escaped. - for (pl = patternListStack.pop(); pl; pl = patternListStack.pop()) { - var tail = re.slice(pl.reStart + pl.open.length) - this.debug('setting tail', re, pl) - // maybe some even number of \, then maybe 1 \, followed by a | - tail = tail.replace(/((?:\\{2}){0,64})(\\?)\|/g, function (_, $1, $2) { - if (!$2) { - // the | isn't already escaped, so escape it. - $2 = '\\' - } - - // need to escape all those slashes *again*, without escaping the - // one that we need for escaping the | character. As it works out, - // escaping an even number of slashes can be done by simply repeating - // it exactly after itself. That's why this trick works. - // - // I am sorry that you have to see this. - return $1 + $1 + $2 + '|' - }) - - this.debug('tail=%j\n %s', tail, tail, pl, re) - var t = pl.type === '*' ? star - : pl.type === '?' ? qmark - : '\\' + pl.type - - hasMagic = true - re = re.slice(0, pl.reStart) + t + '\\(' + tail - } - - // handle trailing things that only matter at the very end. - clearStateChar() - if (escaping) { - // trailing \\ - re += '\\\\' - } - - // only need to apply the nodot start if the re starts with - // something that could conceivably capture a dot - var addPatternStart = false - switch (re.charAt(0)) { - case '.': - case '[': - case '(': addPatternStart = true - } - - // Hack to work around lack of negative lookbehind in JS - // A pattern like: *.!(x).!(y|z) needs to ensure that a name - // like 'a.xyz.yz' doesn't match. So, the first negative - // lookahead, has to look ALL the way ahead, to the end of - // the pattern. - for (var n = negativeLists.length - 1; n > -1; n--) { - var nl = negativeLists[n] - - var nlBefore = re.slice(0, nl.reStart) - var nlFirst = re.slice(nl.reStart, nl.reEnd - 8) - var nlLast = re.slice(nl.reEnd - 8, nl.reEnd) - var nlAfter = re.slice(nl.reEnd) - - nlLast += nlAfter - - // Handle nested stuff like *(*.js|!(*.json)), where open parens - // mean that we should *not* include the ) in the bit that is considered - // "after" the negated section. - var openParensBefore = nlBefore.split('(').length - 1 - var cleanAfter = nlAfter - for (i = 0; i < openParensBefore; i++) { - cleanAfter = cleanAfter.replace(/\)[+*?]?/, '') - } - nlAfter = cleanAfter - - var dollar = '' - if (nlAfter === '' && isSub !== SUBPARSE) { - dollar = '$' - } - var newRe = nlBefore + nlFirst + nlAfter + dollar + nlLast - re = newRe - } - - // if the re is not "" at this point, then we need to make sure - // it doesn't match against an empty path part. - // Otherwise a/* will match a/, which it should not. - if (re !== '' && hasMagic) { - re = '(?=.)' + re - } - - if (addPatternStart) { - re = patternStart + re - } - - // parsing just a piece of a larger pattern. - if (isSub === SUBPARSE) { - return [re, hasMagic] - } - - // skip the regexp for non-magical patterns - // unescape anything in it, though, so that it'll be - // an exact match against a file etc. - if (!hasMagic) { - return globUnescape(pattern) - } - - var flags = options.nocase ? 'i' : '' - try { - var regExp = new RegExp('^' + re + '$', flags) - } catch (er) { - // If it was an invalid regular expression, then it can't match - // anything. This trick looks for a character after the end of - // the string, which is of course impossible, except in multi-line - // mode, but it's not a /m regex. - return new RegExp('$.') - } - - regExp._glob = pattern - regExp._src = re - - return regExp -} - -minimatch.makeRe = function (pattern, options) { - return new Minimatch(pattern, options || {}).makeRe() -} - -Minimatch.prototype.makeRe = makeRe -function makeRe () { - if (this.regexp || this.regexp === false) return this.regexp - - // at this point, this.set is a 2d array of partial - // pattern strings, or "**". - // - // It's better to use .match(). This function shouldn't - // be used, really, but it's pretty convenient sometimes, - // when you just want to work with a regex. - var set = this.set - - if (!set.length) { - this.regexp = false - return this.regexp - } - var options = this.options - - var twoStar = options.noglobstar ? star - : options.dot ? twoStarDot - : twoStarNoDot - var flags = options.nocase ? 'i' : '' - - var re = set.map(function (pattern) { - return pattern.map(function (p) { - return (p === GLOBSTAR) ? twoStar - : (typeof p === 'string') ? regExpEscape(p) - : p._src - }).join('\\\/') - }).join('|') - - // must match entire pattern - // ending in a * or ** will make it less strict. - re = '^(?:' + re + ')$' - - // can match anything, as long as it's not this. - if (this.negate) re = '^(?!' + re + ').*$' - - try { - this.regexp = new RegExp(re, flags) - } catch (ex) { - this.regexp = false - } - return this.regexp -} - -minimatch.match = function (list, pattern, options) { - options = options || {} - var mm = new Minimatch(pattern, options) - list = list.filter(function (f) { - return mm.match(f) - }) - if (mm.options.nonull && !list.length) { - list.push(pattern) - } - return list -} - -Minimatch.prototype.match = match -function match (f, partial) { - this.debug('match', f, this.pattern) - // short-circuit in the case of busted things. - // comments, etc. - if (this.comment) return false - if (this.empty) return f === '' - - if (f === '/' && partial) return true - - var options = this.options - - // windows: need to use /, not \ - if (path.sep !== '/') { - f = f.split(path.sep).join('/') - } - - // treat the test path as a set of pathparts. - f = f.split(slashSplit) - this.debug(this.pattern, 'split', f) - - // just ONE of the pattern sets in this.set needs to match - // in order for it to be valid. If negating, then just one - // match means that we have failed. - // Either way, return on the first hit. - - var set = this.set - this.debug(this.pattern, 'set', set) - - // Find the basename of the path by looking for the last non-empty segment - var filename - var i - for (i = f.length - 1; i >= 0; i--) { - filename = f[i] - if (filename) break - } - - for (i = 0; i < set.length; i++) { - var pattern = set[i] - var file = f - if (options.matchBase && pattern.length === 1) { - file = [filename] - } - var hit = this.matchOne(file, pattern, partial) - if (hit) { - if (options.flipNegate) return true - return !this.negate - } - } - - // didn't get any hits. this is success if it's a negative - // pattern, failure otherwise. - if (options.flipNegate) return false - return this.negate -} - -// set partial to true to test if, for example, -// "/a/b" matches the start of "/*/b/*/d" -// Partial means, if you run out of file before you run -// out of pattern, then that's fine, as long as all -// the parts match. -Minimatch.prototype.matchOne = function (file, pattern, partial) { - var options = this.options - - this.debug('matchOne', - { 'this': this, file: file, pattern: pattern }) - - this.debug('matchOne', file.length, pattern.length) - - for (var fi = 0, - pi = 0, - fl = file.length, - pl = pattern.length - ; (fi < fl) && (pi < pl) - ; fi++, pi++) { - this.debug('matchOne loop') - var p = pattern[pi] - var f = file[fi] - - this.debug(pattern, p, f) - - // should be impossible. - // some invalid regexp stuff in the set. - if (p === false) return false - - if (p === GLOBSTAR) { - this.debug('GLOBSTAR', [pattern, p, f]) - - // "**" - // a/**/b/**/c would match the following: - // a/b/x/y/z/c - // a/x/y/z/b/c - // a/b/x/b/x/c - // a/b/c - // To do this, take the rest of the pattern after - // the **, and see if it would match the file remainder. - // If so, return success. - // If not, the ** "swallows" a segment, and try again. - // This is recursively awful. - // - // a/**/b/**/c matching a/b/x/y/z/c - // - a matches a - // - doublestar - // - matchOne(b/x/y/z/c, b/**/c) - // - b matches b - // - doublestar - // - matchOne(x/y/z/c, c) -> no - // - matchOne(y/z/c, c) -> no - // - matchOne(z/c, c) -> no - // - matchOne(c, c) yes, hit - var fr = fi - var pr = pi + 1 - if (pr === pl) { - this.debug('** at the end') - // a ** at the end will just swallow the rest. - // We have found a match. - // however, it will not swallow /.x, unless - // options.dot is set. - // . and .. are *never* matched by **, for explosively - // exponential reasons. - for (; fi < fl; fi++) { - if (file[fi] === '.' || file[fi] === '..' || - (!options.dot && file[fi].charAt(0) === '.')) return false - } - return true - } - - // ok, let's see if we can swallow whatever we can. - while (fr < fl) { - var swallowee = file[fr] - - this.debug('\nglobstar while', file, fr, pattern, pr, swallowee) - - // XXX remove this slice. Just pass the start index. - if (this.matchOne(file.slice(fr), pattern.slice(pr), partial)) { - this.debug('globstar found match!', fr, fl, swallowee) - // found a match. - return true - } else { - // can't swallow "." or ".." ever. - // can only swallow ".foo" when explicitly asked. - if (swallowee === '.' || swallowee === '..' || - (!options.dot && swallowee.charAt(0) === '.')) { - this.debug('dot detected!', file, fr, pattern, pr) - break - } - - // ** swallows a segment, and continue. - this.debug('globstar swallow a segment, and continue') - fr++ - } - } - - // no match was found. - // However, in partial mode, we can't say this is necessarily over. - // If there's more *pattern* left, then - if (partial) { - // ran out of file - this.debug('\n>>> no match, partial?', file, fr, pattern, pr) - if (fr === fl) return true - } - return false - } - - // something other than ** - // non-magic patterns just have to match exactly - // patterns with magic have been turned into regexps. - var hit - if (typeof p === 'string') { - if (options.nocase) { - hit = f.toLowerCase() === p.toLowerCase() - } else { - hit = f === p - } - this.debug('string match', p, f, hit) - } else { - hit = f.match(p) - this.debug('pattern match', p, f, hit) - } - - if (!hit) return false - } - - // Note: ending in / means that we'll get a final "" - // at the end of the pattern. This can only match a - // corresponding "" at the end of the file. - // If the file ends in /, then it can only match a - // a pattern that ends in /, unless the pattern just - // doesn't have any more for it. But, a/b/ should *not* - // match "a/b/*", even though "" matches against the - // [^/]*? pattern, except in partial mode, where it might - // simply not be reached yet. - // However, a/b/ should still satisfy a/* - - // now either we fell off the end of the pattern, or we're done. - if (fi === fl && pi === pl) { - // ran out of pattern and filename at the same time. - // an exact hit! - return true - } else if (fi === fl) { - // ran out of file, but still had pattern left. - // this is ok if we're doing the match as part of - // a glob fs traversal. - return partial - } else if (pi === pl) { - // ran out of pattern, still have file left. - // this is only acceptable if we're on the very last - // empty segment of a file with a trailing slash. - // a/* should match a/b/ - var emptyFileEnd = (fi === fl - 1) && (file[fi] === '') - return emptyFileEnd - } - - // should be unreachable. - throw new Error('wtf?') -} - -// replace stuff like \* with * -function globUnescape (s) { - return s.replace(/\\(.)/g, '$1') -} - -function regExpEscape (s) { - return s.replace(/[-[\]{}()*+?.,\\^$|#\s]/g, '\\$&') -} - -},{"brace-expansion":11,"path":22}],21:[function(require,module,exports){ -var wrappy = require('wrappy') -module.exports = wrappy(once) -module.exports.strict = wrappy(onceStrict) - -once.proto = once(function () { - Object.defineProperty(Function.prototype, 'once', { - value: function () { - return once(this) - }, - configurable: true - }) - - Object.defineProperty(Function.prototype, 'onceStrict', { - value: function () { - return onceStrict(this) - }, - configurable: true - }) -}) - -function once (fn) { - var f = function () { - if (f.called) return f.value - f.called = true - return f.value = fn.apply(this, arguments) - } - f.called = false - return f -} - -function onceStrict (fn) { - var f = function () { - if (f.called) - throw new Error(f.onceError) - f.called = true - return f.value = fn.apply(this, arguments) - } - var name = fn.name || 'Function wrapped with `once`' - f.onceError = name + " shouldn't be called more than once" - f.called = false - return f -} - -},{"wrappy":29}],22:[function(require,module,exports){ -(function (process){ -// Copyright Joyent, Inc. and other Node contributors. -// -// Permission is hereby granted, free of charge, to any person obtaining a -// copy of this software and associated documentation files (the -// "Software"), to deal in the Software without restriction, including -// without limitation the rights to use, copy, modify, merge, publish, -// distribute, sublicense, and/or sell copies of the Software, and to permit -// persons to whom the Software is furnished to do so, subject to the -// following conditions: -// -// The above copyright notice and this permission notice shall be included -// in all copies or substantial portions of the Software. -// -// THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS -// OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF -// MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN -// NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, -// DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR -// OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE -// USE OR OTHER DEALINGS IN THE SOFTWARE. - -// resolves . and .. elements in a path array with directory names there -// must be no slashes, empty elements, or device names (c:\) in the array -// (so also no leading and trailing slashes - it does not distinguish -// relative and absolute paths) -function normalizeArray(parts, allowAboveRoot) { - // if the path tries to go above the root, `up` ends up > 0 - var up = 0; - for (var i = parts.length - 1; i >= 0; i--) { - var last = parts[i]; - if (last === '.') { - parts.splice(i, 1); - } else if (last === '..') { - parts.splice(i, 1); - up++; - } else if (up) { - parts.splice(i, 1); - up--; - } - } - - // if the path is allowed to go above the root, restore leading ..s - if (allowAboveRoot) { - for (; up--; up) { - parts.unshift('..'); - } - } - - return parts; -} - -// Split a filename into [root, dir, basename, ext], unix version -// 'root' is just a slash, or nothing. -var splitPathRe = - /^(\/?|)([\s\S]*?)((?:\.{1,2}|[^\/]+?|)(\.[^.\/]*|))(?:[\/]*)$/; -var splitPath = function(filename) { - return splitPathRe.exec(filename).slice(1); -}; - -// path.resolve([from ...], to) -// posix version -exports.resolve = function() { - var resolvedPath = '', - resolvedAbsolute = false; - - for (var i = arguments.length - 1; i >= -1 && !resolvedAbsolute; i--) { - var path = (i >= 0) ? arguments[i] : process.cwd(); - - // Skip empty and invalid entries - if (typeof path !== 'string') { - throw new TypeError('Arguments to path.resolve must be strings'); - } else if (!path) { - continue; - } - - resolvedPath = path + '/' + resolvedPath; - resolvedAbsolute = path.charAt(0) === '/'; - } - - // At this point the path should be resolved to a full absolute path, but - // handle relative paths to be safe (might happen when process.cwd() fails) - - // Normalize the path - resolvedPath = normalizeArray(filter(resolvedPath.split('/'), function(p) { - return !!p; - }), !resolvedAbsolute).join('/'); - - return ((resolvedAbsolute ? '/' : '') + resolvedPath) || '.'; -}; - -// path.normalize(path) -// posix version -exports.normalize = function(path) { - var isAbsolute = exports.isAbsolute(path), - trailingSlash = substr(path, -1) === '/'; - - // Normalize the path - path = normalizeArray(filter(path.split('/'), function(p) { - return !!p; - }), !isAbsolute).join('/'); - - if (!path && !isAbsolute) { - path = '.'; - } - if (path && trailingSlash) { - path += '/'; - } - - return (isAbsolute ? '/' : '') + path; -}; - -// posix version -exports.isAbsolute = function(path) { - return path.charAt(0) === '/'; -}; - -// posix version -exports.join = function() { - var paths = Array.prototype.slice.call(arguments, 0); - return exports.normalize(filter(paths, function(p, index) { - if (typeof p !== 'string') { - throw new TypeError('Arguments to path.join must be strings'); - } - return p; - }).join('/')); -}; - - -// path.relative(from, to) -// posix version -exports.relative = function(from, to) { - from = exports.resolve(from).substr(1); - to = exports.resolve(to).substr(1); - - function trim(arr) { - var start = 0; - for (; start < arr.length; start++) { - if (arr[start] !== '') break; - } - - var end = arr.length - 1; - for (; end >= 0; end--) { - if (arr[end] !== '') break; - } - - if (start > end) return []; - return arr.slice(start, end - start + 1); - } - - var fromParts = trim(from.split('/')); - var toParts = trim(to.split('/')); - - var length = Math.min(fromParts.length, toParts.length); - var samePartsLength = length; - for (var i = 0; i < length; i++) { - if (fromParts[i] !== toParts[i]) { - samePartsLength = i; - break; - } - } - - var outputParts = []; - for (var i = samePartsLength; i < fromParts.length; i++) { - outputParts.push('..'); - } - - outputParts = outputParts.concat(toParts.slice(samePartsLength)); - - return outputParts.join('/'); -}; - -exports.sep = '/'; -exports.delimiter = ':'; - -exports.dirname = function(path) { - var result = splitPath(path), - root = result[0], - dir = result[1]; - - if (!root && !dir) { - // No dirname whatsoever - return '.'; - } - - if (dir) { - // It has a dirname, strip trailing slash - dir = dir.substr(0, dir.length - 1); - } - - return root + dir; -}; - - -exports.basename = function(path, ext) { - var f = splitPath(path)[2]; - // TODO: make this comparison case-insensitive on windows? - if (ext && f.substr(-1 * ext.length) === ext) { - f = f.substr(0, f.length - ext.length); - } - return f; -}; - - -exports.extname = function(path) { - return splitPath(path)[3]; -}; - -function filter (xs, f) { - if (xs.filter) return xs.filter(f); - var res = []; - for (var i = 0; i < xs.length; i++) { - if (f(xs[i], i, xs)) res.push(xs[i]); - } - return res; -} - -// String.prototype.substr - negative index don't work in IE8 -var substr = 'ab'.substr(-1) === 'b' - ? function (str, start, len) { return str.substr(start, len) } - : function (str, start, len) { - if (start < 0) start = str.length + start; - return str.substr(start, len); - } -; - -}).call(this,require('_process')) -},{"_process":24}],23:[function(require,module,exports){ -(function (process){ -'use strict'; - -function posix(path) { - return path.charAt(0) === '/'; -} - -function win32(path) { - // https://github.com/nodejs/node/blob/b3fcc245fb25539909ef1d5eaa01dbf92e168633/lib/path.js#L56 - var splitDeviceRe = /^([a-zA-Z]:|[\\\/]{2}[^\\\/]+[\\\/]+[^\\\/]+)?([\\\/])?([\s\S]*?)$/; - var result = splitDeviceRe.exec(path); - var device = result[1] || ''; - var isUnc = Boolean(device && device.charAt(1) !== ':'); - - // UNC paths are always absolute - return Boolean(result[2] || isUnc); -} - -module.exports = process.platform === 'win32' ? win32 : posix; -module.exports.posix = posix; -module.exports.win32 = win32; - -}).call(this,require('_process')) -},{"_process":24}],24:[function(require,module,exports){ -// shim for using process in browser -var process = module.exports = {}; - -// cached from whatever global is present so that test runners that stub it -// don't break things. But we need to wrap it in a try catch in case it is -// wrapped in strict mode code which doesn't define any globals. It's inside a -// function because try/catches deoptimize in certain engines. - -var cachedSetTimeout; -var cachedClearTimeout; - -function defaultSetTimout() { - throw new Error('setTimeout has not been defined'); -} -function defaultClearTimeout () { - throw new Error('clearTimeout has not been defined'); -} -(function () { - try { - if (typeof setTimeout === 'function') { - cachedSetTimeout = setTimeout; - } else { - cachedSetTimeout = defaultSetTimout; - } - } catch (e) { - cachedSetTimeout = defaultSetTimout; - } - try { - if (typeof clearTimeout === 'function') { - cachedClearTimeout = clearTimeout; - } else { - cachedClearTimeout = defaultClearTimeout; - } - } catch (e) { - cachedClearTimeout = defaultClearTimeout; - } -} ()) -function runTimeout(fun) { - if (cachedSetTimeout === setTimeout) { - //normal enviroments in sane situations - return setTimeout(fun, 0); - } - // if setTimeout wasn't available but was latter defined - if ((cachedSetTimeout === defaultSetTimout || !cachedSetTimeout) && setTimeout) { - cachedSetTimeout = setTimeout; - return setTimeout(fun, 0); - } - try { - // when when somebody has screwed with setTimeout but no I.E. maddness - return cachedSetTimeout(fun, 0); - } catch(e){ - try { - // When we are in I.E. but the script has been evaled so I.E. doesn't trust the global object when called normally - return cachedSetTimeout.call(null, fun, 0); - } catch(e){ - // same as above but when it's a version of I.E. that must have the global object for 'this', hopfully our context correct otherwise it will throw a global error - return cachedSetTimeout.call(this, fun, 0); - } - } - - -} -function runClearTimeout(marker) { - if (cachedClearTimeout === clearTimeout) { - //normal enviroments in sane situations - return clearTimeout(marker); - } - // if clearTimeout wasn't available but was latter defined - if ((cachedClearTimeout === defaultClearTimeout || !cachedClearTimeout) && clearTimeout) { - cachedClearTimeout = clearTimeout; - return clearTimeout(marker); - } - try { - // when when somebody has screwed with setTimeout but no I.E. maddness - return cachedClearTimeout(marker); - } catch (e){ - try { - // When we are in I.E. but the script has been evaled so I.E. doesn't trust the global object when called normally - return cachedClearTimeout.call(null, marker); - } catch (e){ - // same as above but when it's a version of I.E. that must have the global object for 'this', hopfully our context correct otherwise it will throw a global error. - // Some versions of I.E. have different rules for clearTimeout vs setTimeout - return cachedClearTimeout.call(this, marker); - } - } - - - -} -var queue = []; -var draining = false; -var currentQueue; -var queueIndex = -1; - -function cleanUpNextTick() { - if (!draining || !currentQueue) { - return; - } - draining = false; - if (currentQueue.length) { - queue = currentQueue.concat(queue); - } else { - queueIndex = -1; - } - if (queue.length) { - drainQueue(); - } -} - -function drainQueue() { - if (draining) { - return; - } - var timeout = runTimeout(cleanUpNextTick); - draining = true; - - var len = queue.length; - while(len) { - currentQueue = queue; - queue = []; - while (++queueIndex < len) { - if (currentQueue) { - currentQueue[queueIndex].run(); - } - } - queueIndex = -1; - len = queue.length; - } - currentQueue = null; - draining = false; - runClearTimeout(timeout); -} - -process.nextTick = function (fun) { - var args = new Array(arguments.length - 1); - if (arguments.length > 1) { - for (var i = 1; i < arguments.length; i++) { - args[i - 1] = arguments[i]; - } - } - queue.push(new Item(fun, args)); - if (queue.length === 1 && !draining) { - runTimeout(drainQueue); - } -}; - -// v8 likes predictible objects -function Item(fun, array) { - this.fun = fun; - this.array = array; -} -Item.prototype.run = function () { - this.fun.apply(null, this.array); -}; -process.title = 'browser'; -process.browser = true; -process.env = {}; -process.argv = []; -process.version = ''; // empty string to avoid regexp issues -process.versions = {}; - -function noop() {} - -process.on = noop; -process.addListener = noop; -process.once = noop; -process.off = noop; -process.removeListener = noop; -process.removeAllListeners = noop; -process.emit = noop; -process.prependListener = noop; -process.prependOnceListener = noop; - -process.listeners = function (name) { return [] } - -process.binding = function (name) { - throw new Error('process.binding is not supported'); -}; - -process.cwd = function () { return '/' }; -process.chdir = function (dir) { - throw new Error('process.chdir is not supported'); -}; -process.umask = function() { return 0; }; - -},{}],25:[function(require,module,exports){ -// Underscore.js 1.8.3 -// http://underscorejs.org -// (c) 2009-2015 Jeremy Ashkenas, DocumentCloud and Investigative Reporters & Editors -// Underscore may be freely distributed under the MIT license. - -(function() { - - // Baseline setup - // -------------- - - // Establish the root object, `window` in the browser, or `exports` on the server. - var root = this; - - // Save the previous value of the `_` variable. - var previousUnderscore = root._; - - // Save bytes in the minified (but not gzipped) version: - var ArrayProto = Array.prototype, ObjProto = Object.prototype, FuncProto = Function.prototype; - - // Create quick reference variables for speed access to core prototypes. - var - push = ArrayProto.push, - slice = ArrayProto.slice, - toString = ObjProto.toString, - hasOwnProperty = ObjProto.hasOwnProperty; - - // All **ECMAScript 5** native function implementations that we hope to use - // are declared here. - var - nativeIsArray = Array.isArray, - nativeKeys = Object.keys, - nativeBind = FuncProto.bind, - nativeCreate = Object.create; - - // Naked function reference for surrogate-prototype-swapping. - var Ctor = function(){}; - - // Create a safe reference to the Underscore object for use below. - var _ = function(obj) { - if (obj instanceof _) return obj; - if (!(this instanceof _)) return new _(obj); - this._wrapped = obj; - }; - - // Export the Underscore object for **Node.js**, with - // backwards-compatibility for the old `require()` API. If we're in - // the browser, add `_` as a global object. - if (typeof exports !== 'undefined') { - if (typeof module !== 'undefined' && module.exports) { - exports = module.exports = _; - } - exports._ = _; - } else { - root._ = _; - } - - // Current version. - _.VERSION = '1.8.3'; - - // Internal function that returns an efficient (for current engines) version - // of the passed-in callback, to be repeatedly applied in other Underscore - // functions. - var optimizeCb = function(func, context, argCount) { - if (context === void 0) return func; - switch (argCount == null ? 3 : argCount) { - case 1: return function(value) { - return func.call(context, value); - }; - case 2: return function(value, other) { - return func.call(context, value, other); - }; - case 3: return function(value, index, collection) { - return func.call(context, value, index, collection); - }; - case 4: return function(accumulator, value, index, collection) { - return func.call(context, accumulator, value, index, collection); - }; - } - return function() { - return func.apply(context, arguments); - }; - }; - - // A mostly-internal function to generate callbacks that can be applied - // to each element in a collection, returning the desired result — either - // identity, an arbitrary callback, a property matcher, or a property accessor. - var cb = function(value, context, argCount) { - if (value == null) return _.identity; - if (_.isFunction(value)) return optimizeCb(value, context, argCount); - if (_.isObject(value)) return _.matcher(value); - return _.property(value); - }; - _.iteratee = function(value, context) { - return cb(value, context, Infinity); - }; - - // An internal function for creating assigner functions. - var createAssigner = function(keysFunc, undefinedOnly) { - return function(obj) { - var length = arguments.length; - if (length < 2 || obj == null) return obj; - for (var index = 1; index < length; index++) { - var source = arguments[index], - keys = keysFunc(source), - l = keys.length; - for (var i = 0; i < l; i++) { - var key = keys[i]; - if (!undefinedOnly || obj[key] === void 0) obj[key] = source[key]; - } - } - return obj; - }; - }; - - // An internal function for creating a new object that inherits from another. - var baseCreate = function(prototype) { - if (!_.isObject(prototype)) return {}; - if (nativeCreate) return nativeCreate(prototype); - Ctor.prototype = prototype; - var result = new Ctor; - Ctor.prototype = null; - return result; - }; - - var property = function(key) { - return function(obj) { - return obj == null ? void 0 : obj[key]; - }; - }; - - // Helper for collection methods to determine whether a collection - // should be iterated as an array or as an object - // Related: http://people.mozilla.org/~jorendorff/es6-draft.html#sec-tolength - // Avoids a very nasty iOS 8 JIT bug on ARM-64. #2094 - var MAX_ARRAY_INDEX = Math.pow(2, 53) - 1; - var getLength = property('length'); - var isArrayLike = function(collection) { - var length = getLength(collection); - return typeof length == 'number' && length >= 0 && length <= MAX_ARRAY_INDEX; - }; - - // Collection Functions - // -------------------- - - // The cornerstone, an `each` implementation, aka `forEach`. - // Handles raw objects in addition to array-likes. Treats all - // sparse array-likes as if they were dense. - _.each = _.forEach = function(obj, iteratee, context) { - iteratee = optimizeCb(iteratee, context); - var i, length; - if (isArrayLike(obj)) { - for (i = 0, length = obj.length; i < length; i++) { - iteratee(obj[i], i, obj); - } - } else { - var keys = _.keys(obj); - for (i = 0, length = keys.length; i < length; i++) { - iteratee(obj[keys[i]], keys[i], obj); - } - } - return obj; - }; - - // Return the results of applying the iteratee to each element. - _.map = _.collect = function(obj, iteratee, context) { - iteratee = cb(iteratee, context); - var keys = !isArrayLike(obj) && _.keys(obj), - length = (keys || obj).length, - results = Array(length); - for (var index = 0; index < length; index++) { - var currentKey = keys ? keys[index] : index; - results[index] = iteratee(obj[currentKey], currentKey, obj); - } - return results; - }; - - // Create a reducing function iterating left or right. - function createReduce(dir) { - // Optimized iterator function as using arguments.length - // in the main function will deoptimize the, see #1991. - function iterator(obj, iteratee, memo, keys, index, length) { - for (; index >= 0 && index < length; index += dir) { - var currentKey = keys ? keys[index] : index; - memo = iteratee(memo, obj[currentKey], currentKey, obj); - } - return memo; - } - - return function(obj, iteratee, memo, context) { - iteratee = optimizeCb(iteratee, context, 4); - var keys = !isArrayLike(obj) && _.keys(obj), - length = (keys || obj).length, - index = dir > 0 ? 0 : length - 1; - // Determine the initial value if none is provided. - if (arguments.length < 3) { - memo = obj[keys ? keys[index] : index]; - index += dir; - } - return iterator(obj, iteratee, memo, keys, index, length); - }; - } - - // **Reduce** builds up a single result from a list of values, aka `inject`, - // or `foldl`. - _.reduce = _.foldl = _.inject = createReduce(1); - - // The right-associative version of reduce, also known as `foldr`. - _.reduceRight = _.foldr = createReduce(-1); - - // Return the first value which passes a truth test. Aliased as `detect`. - _.find = _.detect = function(obj, predicate, context) { - var key; - if (isArrayLike(obj)) { - key = _.findIndex(obj, predicate, context); - } else { - key = _.findKey(obj, predicate, context); - } - if (key !== void 0 && key !== -1) return obj[key]; - }; - - // Return all the elements that pass a truth test. - // Aliased as `select`. - _.filter = _.select = function(obj, predicate, context) { - var results = []; - predicate = cb(predicate, context); - _.each(obj, function(value, index, list) { - if (predicate(value, index, list)) results.push(value); - }); - return results; - }; - - // Return all the elements for which a truth test fails. - _.reject = function(obj, predicate, context) { - return _.filter(obj, _.negate(cb(predicate)), context); - }; - - // Determine whether all of the elements match a truth test. - // Aliased as `all`. - _.every = _.all = function(obj, predicate, context) { - predicate = cb(predicate, context); - var keys = !isArrayLike(obj) && _.keys(obj), - length = (keys || obj).length; - for (var index = 0; index < length; index++) { - var currentKey = keys ? keys[index] : index; - if (!predicate(obj[currentKey], currentKey, obj)) return false; - } - return true; - }; - - // Determine if at least one element in the object matches a truth test. - // Aliased as `any`. - _.some = _.any = function(obj, predicate, context) { - predicate = cb(predicate, context); - var keys = !isArrayLike(obj) && _.keys(obj), - length = (keys || obj).length; - for (var index = 0; index < length; index++) { - var currentKey = keys ? keys[index] : index; - if (predicate(obj[currentKey], currentKey, obj)) return true; - } - return false; - }; - - // Determine if the array or object contains a given item (using `===`). - // Aliased as `includes` and `include`. - _.contains = _.includes = _.include = function(obj, item, fromIndex, guard) { - if (!isArrayLike(obj)) obj = _.values(obj); - if (typeof fromIndex != 'number' || guard) fromIndex = 0; - return _.indexOf(obj, item, fromIndex) >= 0; - }; - - // Invoke a method (with arguments) on every item in a collection. - _.invoke = function(obj, method) { - var args = slice.call(arguments, 2); - var isFunc = _.isFunction(method); - return _.map(obj, function(value) { - var func = isFunc ? method : value[method]; - return func == null ? func : func.apply(value, args); - }); - }; - - // Convenience version of a common use case of `map`: fetching a property. - _.pluck = function(obj, key) { - return _.map(obj, _.property(key)); - }; - - // Convenience version of a common use case of `filter`: selecting only objects - // containing specific `key:value` pairs. - _.where = function(obj, attrs) { - return _.filter(obj, _.matcher(attrs)); - }; - - // Convenience version of a common use case of `find`: getting the first object - // containing specific `key:value` pairs. - _.findWhere = function(obj, attrs) { - return _.find(obj, _.matcher(attrs)); - }; - - // Return the maximum element (or element-based computation). - _.max = function(obj, iteratee, context) { - var result = -Infinity, lastComputed = -Infinity, - value, computed; - if (iteratee == null && obj != null) { - obj = isArrayLike(obj) ? obj : _.values(obj); - for (var i = 0, length = obj.length; i < length; i++) { - value = obj[i]; - if (value > result) { - result = value; - } - } - } else { - iteratee = cb(iteratee, context); - _.each(obj, function(value, index, list) { - computed = iteratee(value, index, list); - if (computed > lastComputed || computed === -Infinity && result === -Infinity) { - result = value; - lastComputed = computed; - } - }); - } - return result; - }; - - // Return the minimum element (or element-based computation). - _.min = function(obj, iteratee, context) { - var result = Infinity, lastComputed = Infinity, - value, computed; - if (iteratee == null && obj != null) { - obj = isArrayLike(obj) ? obj : _.values(obj); - for (var i = 0, length = obj.length; i < length; i++) { - value = obj[i]; - if (value < result) { - result = value; - } - } - } else { - iteratee = cb(iteratee, context); - _.each(obj, function(value, index, list) { - computed = iteratee(value, index, list); - if (computed < lastComputed || computed === Infinity && result === Infinity) { - result = value; - lastComputed = computed; - } - }); - } - return result; - }; - - // Shuffle a collection, using the modern version of the - // [Fisher-Yates shuffle](http://en.wikipedia.org/wiki/Fisher–Yates_shuffle). - _.shuffle = function(obj) { - var set = isArrayLike(obj) ? obj : _.values(obj); - var length = set.length; - var shuffled = Array(length); - for (var index = 0, rand; index < length; index++) { - rand = _.random(0, index); - if (rand !== index) shuffled[index] = shuffled[rand]; - shuffled[rand] = set[index]; - } - return shuffled; - }; - - // Sample **n** random values from a collection. - // If **n** is not specified, returns a single random element. - // The internal `guard` argument allows it to work with `map`. - _.sample = function(obj, n, guard) { - if (n == null || guard) { - if (!isArrayLike(obj)) obj = _.values(obj); - return obj[_.random(obj.length - 1)]; - } - return _.shuffle(obj).slice(0, Math.max(0, n)); - }; - - // Sort the object's values by a criterion produced by an iteratee. - _.sortBy = function(obj, iteratee, context) { - iteratee = cb(iteratee, context); - return _.pluck(_.map(obj, function(value, index, list) { - return { - value: value, - index: index, - criteria: iteratee(value, index, list) - }; - }).sort(function(left, right) { - var a = left.criteria; - var b = right.criteria; - if (a !== b) { - if (a > b || a === void 0) return 1; - if (a < b || b === void 0) return -1; - } - return left.index - right.index; - }), 'value'); - }; - - // An internal function used for aggregate "group by" operations. - var group = function(behavior) { - return function(obj, iteratee, context) { - var result = {}; - iteratee = cb(iteratee, context); - _.each(obj, function(value, index) { - var key = iteratee(value, index, obj); - behavior(result, value, key); - }); - return result; - }; - }; - - // Groups the object's values by a criterion. Pass either a string attribute - // to group by, or a function that returns the criterion. - _.groupBy = group(function(result, value, key) { - if (_.has(result, key)) result[key].push(value); else result[key] = [value]; - }); - - // Indexes the object's values by a criterion, similar to `groupBy`, but for - // when you know that your index values will be unique. - _.indexBy = group(function(result, value, key) { - result[key] = value; - }); - - // Counts instances of an object that group by a certain criterion. Pass - // either a string attribute to count by, or a function that returns the - // criterion. - _.countBy = group(function(result, value, key) { - if (_.has(result, key)) result[key]++; else result[key] = 1; - }); - - // Safely create a real, live array from anything iterable. - _.toArray = function(obj) { - if (!obj) return []; - if (_.isArray(obj)) return slice.call(obj); - if (isArrayLike(obj)) return _.map(obj, _.identity); - return _.values(obj); - }; - - // Return the number of elements in an object. - _.size = function(obj) { - if (obj == null) return 0; - return isArrayLike(obj) ? obj.length : _.keys(obj).length; - }; - - // Split a collection into two arrays: one whose elements all satisfy the given - // predicate, and one whose elements all do not satisfy the predicate. - _.partition = function(obj, predicate, context) { - predicate = cb(predicate, context); - var pass = [], fail = []; - _.each(obj, function(value, key, obj) { - (predicate(value, key, obj) ? pass : fail).push(value); - }); - return [pass, fail]; - }; - - // Array Functions - // --------------- - - // Get the first element of an array. Passing **n** will return the first N - // values in the array. Aliased as `head` and `take`. The **guard** check - // allows it to work with `_.map`. - _.first = _.head = _.take = function(array, n, guard) { - if (array == null) return void 0; - if (n == null || guard) return array[0]; - return _.initial(array, array.length - n); - }; - - // Returns everything but the last entry of the array. Especially useful on - // the arguments object. Passing **n** will return all the values in - // the array, excluding the last N. - _.initial = function(array, n, guard) { - return slice.call(array, 0, Math.max(0, array.length - (n == null || guard ? 1 : n))); - }; - - // Get the last element of an array. Passing **n** will return the last N - // values in the array. - _.last = function(array, n, guard) { - if (array == null) return void 0; - if (n == null || guard) return array[array.length - 1]; - return _.rest(array, Math.max(0, array.length - n)); - }; - - // Returns everything but the first entry of the array. Aliased as `tail` and `drop`. - // Especially useful on the arguments object. Passing an **n** will return - // the rest N values in the array. - _.rest = _.tail = _.drop = function(array, n, guard) { - return slice.call(array, n == null || guard ? 1 : n); - }; - - // Trim out all falsy values from an array. - _.compact = function(array) { - return _.filter(array, _.identity); - }; - - // Internal implementation of a recursive `flatten` function. - var flatten = function(input, shallow, strict, startIndex) { - var output = [], idx = 0; - for (var i = startIndex || 0, length = getLength(input); i < length; i++) { - var value = input[i]; - if (isArrayLike(value) && (_.isArray(value) || _.isArguments(value))) { - //flatten current level of array or arguments object - if (!shallow) value = flatten(value, shallow, strict); - var j = 0, len = value.length; - output.length += len; - while (j < len) { - output[idx++] = value[j++]; - } - } else if (!strict) { - output[idx++] = value; - } - } - return output; - }; - - // Flatten out an array, either recursively (by default), or just one level. - _.flatten = function(array, shallow) { - return flatten(array, shallow, false); - }; - - // Return a version of the array that does not contain the specified value(s). - _.without = function(array) { - return _.difference(array, slice.call(arguments, 1)); - }; - - // Produce a duplicate-free version of the array. If the array has already - // been sorted, you have the option of using a faster algorithm. - // Aliased as `unique`. - _.uniq = _.unique = function(array, isSorted, iteratee, context) { - if (!_.isBoolean(isSorted)) { - context = iteratee; - iteratee = isSorted; - isSorted = false; - } - if (iteratee != null) iteratee = cb(iteratee, context); - var result = []; - var seen = []; - for (var i = 0, length = getLength(array); i < length; i++) { - var value = array[i], - computed = iteratee ? iteratee(value, i, array) : value; - if (isSorted) { - if (!i || seen !== computed) result.push(value); - seen = computed; - } else if (iteratee) { - if (!_.contains(seen, computed)) { - seen.push(computed); - result.push(value); - } - } else if (!_.contains(result, value)) { - result.push(value); - } - } - return result; - }; - - // Produce an array that contains the union: each distinct element from all of - // the passed-in arrays. - _.union = function() { - return _.uniq(flatten(arguments, true, true)); - }; - - // Produce an array that contains every item shared between all the - // passed-in arrays. - _.intersection = function(array) { - var result = []; - var argsLength = arguments.length; - for (var i = 0, length = getLength(array); i < length; i++) { - var item = array[i]; - if (_.contains(result, item)) continue; - for (var j = 1; j < argsLength; j++) { - if (!_.contains(arguments[j], item)) break; - } - if (j === argsLength) result.push(item); - } - return result; - }; - - // Take the difference between one array and a number of other arrays. - // Only the elements present in just the first array will remain. - _.difference = function(array) { - var rest = flatten(arguments, true, true, 1); - return _.filter(array, function(value){ - return !_.contains(rest, value); - }); - }; - - // Zip together multiple lists into a single array -- elements that share - // an index go together. - _.zip = function() { - return _.unzip(arguments); - }; - - // Complement of _.zip. Unzip accepts an array of arrays and groups - // each array's elements on shared indices - _.unzip = function(array) { - var length = array && _.max(array, getLength).length || 0; - var result = Array(length); - - for (var index = 0; index < length; index++) { - result[index] = _.pluck(array, index); - } - return result; - }; - - // Converts lists into objects. Pass either a single array of `[key, value]` - // pairs, or two parallel arrays of the same length -- one of keys, and one of - // the corresponding values. - _.object = function(list, values) { - var result = {}; - for (var i = 0, length = getLength(list); i < length; i++) { - if (values) { - result[list[i]] = values[i]; - } else { - result[list[i][0]] = list[i][1]; - } - } - return result; - }; - - // Generator function to create the findIndex and findLastIndex functions - function createPredicateIndexFinder(dir) { - return function(array, predicate, context) { - predicate = cb(predicate, context); - var length = getLength(array); - var index = dir > 0 ? 0 : length - 1; - for (; index >= 0 && index < length; index += dir) { - if (predicate(array[index], index, array)) return index; - } - return -1; - }; - } - - // Returns the first index on an array-like that passes a predicate test - _.findIndex = createPredicateIndexFinder(1); - _.findLastIndex = createPredicateIndexFinder(-1); - - // Use a comparator function to figure out the smallest index at which - // an object should be inserted so as to maintain order. Uses binary search. - _.sortedIndex = function(array, obj, iteratee, context) { - iteratee = cb(iteratee, context, 1); - var value = iteratee(obj); - var low = 0, high = getLength(array); - while (low < high) { - var mid = Math.floor((low + high) / 2); - if (iteratee(array[mid]) < value) low = mid + 1; else high = mid; - } - return low; - }; - - // Generator function to create the indexOf and lastIndexOf functions - function createIndexFinder(dir, predicateFind, sortedIndex) { - return function(array, item, idx) { - var i = 0, length = getLength(array); - if (typeof idx == 'number') { - if (dir > 0) { - i = idx >= 0 ? idx : Math.max(idx + length, i); - } else { - length = idx >= 0 ? Math.min(idx + 1, length) : idx + length + 1; - } - } else if (sortedIndex && idx && length) { - idx = sortedIndex(array, item); - return array[idx] === item ? idx : -1; - } - if (item !== item) { - idx = predicateFind(slice.call(array, i, length), _.isNaN); - return idx >= 0 ? idx + i : -1; - } - for (idx = dir > 0 ? i : length - 1; idx >= 0 && idx < length; idx += dir) { - if (array[idx] === item) return idx; - } - return -1; - }; - } - - // Return the position of the first occurrence of an item in an array, - // or -1 if the item is not included in the array. - // If the array is large and already in sort order, pass `true` - // for **isSorted** to use binary search. - _.indexOf = createIndexFinder(1, _.findIndex, _.sortedIndex); - _.lastIndexOf = createIndexFinder(-1, _.findLastIndex); - - // Generate an integer Array containing an arithmetic progression. A port of - // the native Python `range()` function. See - // [the Python documentation](http://docs.python.org/library/functions.html#range). - _.range = function(start, stop, step) { - if (stop == null) { - stop = start || 0; - start = 0; - } - step = step || 1; - - var length = Math.max(Math.ceil((stop - start) / step), 0); - var range = Array(length); - - for (var idx = 0; idx < length; idx++, start += step) { - range[idx] = start; - } - - return range; - }; - - // Function (ahem) Functions - // ------------------ - - // Determines whether to execute a function as a constructor - // or a normal function with the provided arguments - var executeBound = function(sourceFunc, boundFunc, context, callingContext, args) { - if (!(callingContext instanceof boundFunc)) return sourceFunc.apply(context, args); - var self = baseCreate(sourceFunc.prototype); - var result = sourceFunc.apply(self, args); - if (_.isObject(result)) return result; - return self; - }; - - // Create a function bound to a given object (assigning `this`, and arguments, - // optionally). Delegates to **ECMAScript 5**'s native `Function.bind` if - // available. - _.bind = function(func, context) { - if (nativeBind && func.bind === nativeBind) return nativeBind.apply(func, slice.call(arguments, 1)); - if (!_.isFunction(func)) throw new TypeError('Bind must be called on a function'); - var args = slice.call(arguments, 2); - var bound = function() { - return executeBound(func, bound, context, this, args.concat(slice.call(arguments))); - }; - return bound; - }; - - // Partially apply a function by creating a version that has had some of its - // arguments pre-filled, without changing its dynamic `this` context. _ acts - // as a placeholder, allowing any combination of arguments to be pre-filled. - _.partial = function(func) { - var boundArgs = slice.call(arguments, 1); - var bound = function() { - var position = 0, length = boundArgs.length; - var args = Array(length); - for (var i = 0; i < length; i++) { - args[i] = boundArgs[i] === _ ? arguments[position++] : boundArgs[i]; - } - while (position < arguments.length) args.push(arguments[position++]); - return executeBound(func, bound, this, this, args); - }; - return bound; - }; - - // Bind a number of an object's methods to that object. Remaining arguments - // are the method names to be bound. Useful for ensuring that all callbacks - // defined on an object belong to it. - _.bindAll = function(obj) { - var i, length = arguments.length, key; - if (length <= 1) throw new Error('bindAll must be passed function names'); - for (i = 1; i < length; i++) { - key = arguments[i]; - obj[key] = _.bind(obj[key], obj); - } - return obj; - }; - - // Memoize an expensive function by storing its results. - _.memoize = function(func, hasher) { - var memoize = function(key) { - var cache = memoize.cache; - var address = '' + (hasher ? hasher.apply(this, arguments) : key); - if (!_.has(cache, address)) cache[address] = func.apply(this, arguments); - return cache[address]; - }; - memoize.cache = {}; - return memoize; - }; - - // Delays a function for the given number of milliseconds, and then calls - // it with the arguments supplied. - _.delay = function(func, wait) { - var args = slice.call(arguments, 2); - return setTimeout(function(){ - return func.apply(null, args); - }, wait); - }; - - // Defers a function, scheduling it to run after the current call stack has - // cleared. - _.defer = _.partial(_.delay, _, 1); - - // Returns a function, that, when invoked, will only be triggered at most once - // during a given window of time. Normally, the throttled function will run - // as much as it can, without ever going more than once per `wait` duration; - // but if you'd like to disable the execution on the leading edge, pass - // `{leading: false}`. To disable execution on the trailing edge, ditto. - _.throttle = function(func, wait, options) { - var context, args, result; - var timeout = null; - var previous = 0; - if (!options) options = {}; - var later = function() { - previous = options.leading === false ? 0 : _.now(); - timeout = null; - result = func.apply(context, args); - if (!timeout) context = args = null; - }; - return function() { - var now = _.now(); - if (!previous && options.leading === false) previous = now; - var remaining = wait - (now - previous); - context = this; - args = arguments; - if (remaining <= 0 || remaining > wait) { - if (timeout) { - clearTimeout(timeout); - timeout = null; - } - previous = now; - result = func.apply(context, args); - if (!timeout) context = args = null; - } else if (!timeout && options.trailing !== false) { - timeout = setTimeout(later, remaining); - } - return result; - }; - }; - - // Returns a function, that, as long as it continues to be invoked, will not - // be triggered. The function will be called after it stops being called for - // N milliseconds. If `immediate` is passed, trigger the function on the - // leading edge, instead of the trailing. - _.debounce = function(func, wait, immediate) { - var timeout, args, context, timestamp, result; - - var later = function() { - var last = _.now() - timestamp; - - if (last < wait && last >= 0) { - timeout = setTimeout(later, wait - last); - } else { - timeout = null; - if (!immediate) { - result = func.apply(context, args); - if (!timeout) context = args = null; - } - } - }; - - return function() { - context = this; - args = arguments; - timestamp = _.now(); - var callNow = immediate && !timeout; - if (!timeout) timeout = setTimeout(later, wait); - if (callNow) { - result = func.apply(context, args); - context = args = null; - } - - return result; - }; - }; - - // Returns the first function passed as an argument to the second, - // allowing you to adjust arguments, run code before and after, and - // conditionally execute the original function. - _.wrap = function(func, wrapper) { - return _.partial(wrapper, func); - }; - - // Returns a negated version of the passed-in predicate. - _.negate = function(predicate) { - return function() { - return !predicate.apply(this, arguments); - }; - }; - - // Returns a function that is the composition of a list of functions, each - // consuming the return value of the function that follows. - _.compose = function() { - var args = arguments; - var start = args.length - 1; - return function() { - var i = start; - var result = args[start].apply(this, arguments); - while (i--) result = args[i].call(this, result); - return result; - }; - }; - - // Returns a function that will only be executed on and after the Nth call. - _.after = function(times, func) { - return function() { - if (--times < 1) { - return func.apply(this, arguments); - } - }; - }; - - // Returns a function that will only be executed up to (but not including) the Nth call. - _.before = function(times, func) { - var memo; - return function() { - if (--times > 0) { - memo = func.apply(this, arguments); - } - if (times <= 1) func = null; - return memo; - }; - }; - - // Returns a function that will be executed at most one time, no matter how - // often you call it. Useful for lazy initialization. - _.once = _.partial(_.before, 2); - - // Object Functions - // ---------------- - - // Keys in IE < 9 that won't be iterated by `for key in ...` and thus missed. - var hasEnumBug = !{toString: null}.propertyIsEnumerable('toString'); - var nonEnumerableProps = ['valueOf', 'isPrototypeOf', 'toString', - 'propertyIsEnumerable', 'hasOwnProperty', 'toLocaleString']; - - function collectNonEnumProps(obj, keys) { - var nonEnumIdx = nonEnumerableProps.length; - var constructor = obj.constructor; - var proto = (_.isFunction(constructor) && constructor.prototype) || ObjProto; - - // Constructor is a special case. - var prop = 'constructor'; - if (_.has(obj, prop) && !_.contains(keys, prop)) keys.push(prop); - - while (nonEnumIdx--) { - prop = nonEnumerableProps[nonEnumIdx]; - if (prop in obj && obj[prop] !== proto[prop] && !_.contains(keys, prop)) { - keys.push(prop); - } - } - } - - // Retrieve the names of an object's own properties. - // Delegates to **ECMAScript 5**'s native `Object.keys` - _.keys = function(obj) { - if (!_.isObject(obj)) return []; - if (nativeKeys) return nativeKeys(obj); - var keys = []; - for (var key in obj) if (_.has(obj, key)) keys.push(key); - // Ahem, IE < 9. - if (hasEnumBug) collectNonEnumProps(obj, keys); - return keys; - }; - - // Retrieve all the property names of an object. - _.allKeys = function(obj) { - if (!_.isObject(obj)) return []; - var keys = []; - for (var key in obj) keys.push(key); - // Ahem, IE < 9. - if (hasEnumBug) collectNonEnumProps(obj, keys); - return keys; - }; - - // Retrieve the values of an object's properties. - _.values = function(obj) { - var keys = _.keys(obj); - var length = keys.length; - var values = Array(length); - for (var i = 0; i < length; i++) { - values[i] = obj[keys[i]]; - } - return values; - }; - - // Returns the results of applying the iteratee to each element of the object - // In contrast to _.map it returns an object - _.mapObject = function(obj, iteratee, context) { - iteratee = cb(iteratee, context); - var keys = _.keys(obj), - length = keys.length, - results = {}, - currentKey; - for (var index = 0; index < length; index++) { - currentKey = keys[index]; - results[currentKey] = iteratee(obj[currentKey], currentKey, obj); - } - return results; - }; - - // Convert an object into a list of `[key, value]` pairs. - _.pairs = function(obj) { - var keys = _.keys(obj); - var length = keys.length; - var pairs = Array(length); - for (var i = 0; i < length; i++) { - pairs[i] = [keys[i], obj[keys[i]]]; - } - return pairs; - }; - - // Invert the keys and values of an object. The values must be serializable. - _.invert = function(obj) { - var result = {}; - var keys = _.keys(obj); - for (var i = 0, length = keys.length; i < length; i++) { - result[obj[keys[i]]] = keys[i]; - } - return result; - }; - - // Return a sorted list of the function names available on the object. - // Aliased as `methods` - _.functions = _.methods = function(obj) { - var names = []; - for (var key in obj) { - if (_.isFunction(obj[key])) names.push(key); - } - return names.sort(); - }; - - // Extend a given object with all the properties in passed-in object(s). - _.extend = createAssigner(_.allKeys); - - // Assigns a given object with all the own properties in the passed-in object(s) - // (https://developer.mozilla.org/docs/Web/JavaScript/Reference/Global_Objects/Object/assign) - _.extendOwn = _.assign = createAssigner(_.keys); - - // Returns the first key on an object that passes a predicate test - _.findKey = function(obj, predicate, context) { - predicate = cb(predicate, context); - var keys = _.keys(obj), key; - for (var i = 0, length = keys.length; i < length; i++) { - key = keys[i]; - if (predicate(obj[key], key, obj)) return key; - } - }; - - // Return a copy of the object only containing the whitelisted properties. - _.pick = function(object, oiteratee, context) { - var result = {}, obj = object, iteratee, keys; - if (obj == null) return result; - if (_.isFunction(oiteratee)) { - keys = _.allKeys(obj); - iteratee = optimizeCb(oiteratee, context); - } else { - keys = flatten(arguments, false, false, 1); - iteratee = function(value, key, obj) { return key in obj; }; - obj = Object(obj); - } - for (var i = 0, length = keys.length; i < length; i++) { - var key = keys[i]; - var value = obj[key]; - if (iteratee(value, key, obj)) result[key] = value; - } - return result; - }; - - // Return a copy of the object without the blacklisted properties. - _.omit = function(obj, iteratee, context) { - if (_.isFunction(iteratee)) { - iteratee = _.negate(iteratee); - } else { - var keys = _.map(flatten(arguments, false, false, 1), String); - iteratee = function(value, key) { - return !_.contains(keys, key); - }; - } - return _.pick(obj, iteratee, context); - }; - - // Fill in a given object with default properties. - _.defaults = createAssigner(_.allKeys, true); - - // Creates an object that inherits from the given prototype object. - // If additional properties are provided then they will be added to the - // created object. - _.create = function(prototype, props) { - var result = baseCreate(prototype); - if (props) _.extendOwn(result, props); - return result; - }; - - // Create a (shallow-cloned) duplicate of an object. - _.clone = function(obj) { - if (!_.isObject(obj)) return obj; - return _.isArray(obj) ? obj.slice() : _.extend({}, obj); - }; - - // Invokes interceptor with the obj, and then returns obj. - // The primary purpose of this method is to "tap into" a method chain, in - // order to perform operations on intermediate results within the chain. - _.tap = function(obj, interceptor) { - interceptor(obj); - return obj; - }; - - // Returns whether an object has a given set of `key:value` pairs. - _.isMatch = function(object, attrs) { - var keys = _.keys(attrs), length = keys.length; - if (object == null) return !length; - var obj = Object(object); - for (var i = 0; i < length; i++) { - var key = keys[i]; - if (attrs[key] !== obj[key] || !(key in obj)) return false; - } - return true; - }; - - - // Internal recursive comparison function for `isEqual`. - var eq = function(a, b, aStack, bStack) { - // Identical objects are equal. `0 === -0`, but they aren't identical. - // See the [Harmony `egal` proposal](http://wiki.ecmascript.org/doku.php?id=harmony:egal). - if (a === b) return a !== 0 || 1 / a === 1 / b; - // A strict comparison is necessary because `null == undefined`. - if (a == null || b == null) return a === b; - // Unwrap any wrapped objects. - if (a instanceof _) a = a._wrapped; - if (b instanceof _) b = b._wrapped; - // Compare `[[Class]]` names. - var className = toString.call(a); - if (className !== toString.call(b)) return false; - switch (className) { - // Strings, numbers, regular expressions, dates, and booleans are compared by value. - case '[object RegExp]': - // RegExps are coerced to strings for comparison (Note: '' + /a/i === '/a/i') - case '[object String]': - // Primitives and their corresponding object wrappers are equivalent; thus, `"5"` is - // equivalent to `new String("5")`. - return '' + a === '' + b; - case '[object Number]': - // `NaN`s are equivalent, but non-reflexive. - // Object(NaN) is equivalent to NaN - if (+a !== +a) return +b !== +b; - // An `egal` comparison is performed for other numeric values. - return +a === 0 ? 1 / +a === 1 / b : +a === +b; - case '[object Date]': - case '[object Boolean]': - // Coerce dates and booleans to numeric primitive values. Dates are compared by their - // millisecond representations. Note that invalid dates with millisecond representations - // of `NaN` are not equivalent. - return +a === +b; - } - - var areArrays = className === '[object Array]'; - if (!areArrays) { - if (typeof a != 'object' || typeof b != 'object') return false; - - // Objects with different constructors are not equivalent, but `Object`s or `Array`s - // from different frames are. - var aCtor = a.constructor, bCtor = b.constructor; - if (aCtor !== bCtor && !(_.isFunction(aCtor) && aCtor instanceof aCtor && - _.isFunction(bCtor) && bCtor instanceof bCtor) - && ('constructor' in a && 'constructor' in b)) { - return false; - } - } - // Assume equality for cyclic structures. The algorithm for detecting cyclic - // structures is adapted from ES 5.1 section 15.12.3, abstract operation `JO`. - - // Initializing stack of traversed objects. - // It's done here since we only need them for objects and arrays comparison. - aStack = aStack || []; - bStack = bStack || []; - var length = aStack.length; - while (length--) { - // Linear search. Performance is inversely proportional to the number of - // unique nested structures. - if (aStack[length] === a) return bStack[length] === b; - } - - // Add the first object to the stack of traversed objects. - aStack.push(a); - bStack.push(b); - - // Recursively compare objects and arrays. - if (areArrays) { - // Compare array lengths to determine if a deep comparison is necessary. - length = a.length; - if (length !== b.length) return false; - // Deep compare the contents, ignoring non-numeric properties. - while (length--) { - if (!eq(a[length], b[length], aStack, bStack)) return false; - } - } else { - // Deep compare objects. - var keys = _.keys(a), key; - length = keys.length; - // Ensure that both objects contain the same number of properties before comparing deep equality. - if (_.keys(b).length !== length) return false; - while (length--) { - // Deep compare each member - key = keys[length]; - if (!(_.has(b, key) && eq(a[key], b[key], aStack, bStack))) return false; - } - } - // Remove the first object from the stack of traversed objects. - aStack.pop(); - bStack.pop(); - return true; - }; - - // Perform a deep comparison to check if two objects are equal. - _.isEqual = function(a, b) { - return eq(a, b); - }; - - // Is a given array, string, or object empty? - // An "empty" object has no enumerable own-properties. - _.isEmpty = function(obj) { - if (obj == null) return true; - if (isArrayLike(obj) && (_.isArray(obj) || _.isString(obj) || _.isArguments(obj))) return obj.length === 0; - return _.keys(obj).length === 0; - }; - - // Is a given value a DOM element? - _.isElement = function(obj) { - return !!(obj && obj.nodeType === 1); - }; - - // Is a given value an array? - // Delegates to ECMA5's native Array.isArray - _.isArray = nativeIsArray || function(obj) { - return toString.call(obj) === '[object Array]'; - }; - - // Is a given variable an object? - _.isObject = function(obj) { - var type = typeof obj; - return type === 'function' || type === 'object' && !!obj; - }; - - // Add some isType methods: isArguments, isFunction, isString, isNumber, isDate, isRegExp, isError. - _.each(['Arguments', 'Function', 'String', 'Number', 'Date', 'RegExp', 'Error'], function(name) { - _['is' + name] = function(obj) { - return toString.call(obj) === '[object ' + name + ']'; - }; - }); - - // Define a fallback version of the method in browsers (ahem, IE < 9), where - // there isn't any inspectable "Arguments" type. - if (!_.isArguments(arguments)) { - _.isArguments = function(obj) { - return _.has(obj, 'callee'); - }; - } - - // Optimize `isFunction` if appropriate. Work around some typeof bugs in old v8, - // IE 11 (#1621), and in Safari 8 (#1929). - if (typeof /./ != 'function' && typeof Int8Array != 'object') { - _.isFunction = function(obj) { - return typeof obj == 'function' || false; - }; - } - - // Is a given object a finite number? - _.isFinite = function(obj) { - return isFinite(obj) && !isNaN(parseFloat(obj)); - }; - - // Is the given value `NaN`? (NaN is the only number which does not equal itself). - _.isNaN = function(obj) { - return _.isNumber(obj) && obj !== +obj; - }; - - // Is a given value a boolean? - _.isBoolean = function(obj) { - return obj === true || obj === false || toString.call(obj) === '[object Boolean]'; - }; - - // Is a given value equal to null? - _.isNull = function(obj) { - return obj === null; - }; - - // Is a given variable undefined? - _.isUndefined = function(obj) { - return obj === void 0; - }; - - // Shortcut function for checking if an object has a given property directly - // on itself (in other words, not on a prototype). - _.has = function(obj, key) { - return obj != null && hasOwnProperty.call(obj, key); - }; - - // Utility Functions - // ----------------- - - // Run Underscore.js in *noConflict* mode, returning the `_` variable to its - // previous owner. Returns a reference to the Underscore object. - _.noConflict = function() { - root._ = previousUnderscore; - return this; - }; - - // Keep the identity function around for default iteratees. - _.identity = function(value) { - return value; - }; - - // Predicate-generating functions. Often useful outside of Underscore. - _.constant = function(value) { - return function() { - return value; - }; - }; - - _.noop = function(){}; - - _.property = property; - - // Generates a function for a given object that returns a given property. - _.propertyOf = function(obj) { - return obj == null ? function(){} : function(key) { - return obj[key]; - }; - }; - - // Returns a predicate for checking whether an object has a given set of - // `key:value` pairs. - _.matcher = _.matches = function(attrs) { - attrs = _.extendOwn({}, attrs); - return function(obj) { - return _.isMatch(obj, attrs); - }; - }; - - // Run a function **n** times. - _.times = function(n, iteratee, context) { - var accum = Array(Math.max(0, n)); - iteratee = optimizeCb(iteratee, context, 1); - for (var i = 0; i < n; i++) accum[i] = iteratee(i); - return accum; - }; - - // Return a random integer between min and max (inclusive). - _.random = function(min, max) { - if (max == null) { - max = min; - min = 0; - } - return min + Math.floor(Math.random() * (max - min + 1)); - }; - - // A (possibly faster) way to get the current timestamp as an integer. - _.now = Date.now || function() { - return new Date().getTime(); - }; - - // List of HTML entities for escaping. - var escapeMap = { - '&': '&', - '<': '<', - '>': '>', - '"': '"', - "'": ''', - '`': '`' - }; - var unescapeMap = _.invert(escapeMap); - - // Functions for escaping and unescaping strings to/from HTML interpolation. - var createEscaper = function(map) { - var escaper = function(match) { - return map[match]; - }; - // Regexes for identifying a key that needs to be escaped - var source = '(?:' + _.keys(map).join('|') + ')'; - var testRegexp = RegExp(source); - var replaceRegexp = RegExp(source, 'g'); - return function(string) { - string = string == null ? '' : '' + string; - return testRegexp.test(string) ? string.replace(replaceRegexp, escaper) : string; - }; - }; - _.escape = createEscaper(escapeMap); - _.unescape = createEscaper(unescapeMap); - - // If the value of the named `property` is a function then invoke it with the - // `object` as context; otherwise, return it. - _.result = function(object, property, fallback) { - var value = object == null ? void 0 : object[property]; - if (value === void 0) { - value = fallback; - } - return _.isFunction(value) ? value.call(object) : value; - }; - - // Generate a unique integer id (unique within the entire client session). - // Useful for temporary DOM ids. - var idCounter = 0; - _.uniqueId = function(prefix) { - var id = ++idCounter + ''; - return prefix ? prefix + id : id; - }; - - // By default, Underscore uses ERB-style template delimiters, change the - // following template settings to use alternative delimiters. - _.templateSettings = { - evaluate : /<%([\s\S]+?)%>/g, - interpolate : /<%=([\s\S]+?)%>/g, - escape : /<%-([\s\S]+?)%>/g - }; - - // When customizing `templateSettings`, if you don't want to define an - // interpolation, evaluation or escaping regex, we need one that is - // guaranteed not to match. - var noMatch = /(.)^/; - - // Certain characters need to be escaped so that they can be put into a - // string literal. - var escapes = { - "'": "'", - '\\': '\\', - '\r': 'r', - '\n': 'n', - '\u2028': 'u2028', - '\u2029': 'u2029' - }; - - var escaper = /\\|'|\r|\n|\u2028|\u2029/g; - - var escapeChar = function(match) { - return '\\' + escapes[match]; - }; - - // JavaScript micro-templating, similar to John Resig's implementation. - // Underscore templating handles arbitrary delimiters, preserves whitespace, - // and correctly escapes quotes within interpolated code. - // NB: `oldSettings` only exists for backwards compatibility. - _.template = function(text, settings, oldSettings) { - if (!settings && oldSettings) settings = oldSettings; - settings = _.defaults({}, settings, _.templateSettings); - - // Combine delimiters into one regular expression via alternation. - var matcher = RegExp([ - (settings.escape || noMatch).source, - (settings.interpolate || noMatch).source, - (settings.evaluate || noMatch).source - ].join('|') + '|$', 'g'); - - // Compile the template source, escaping string literals appropriately. - var index = 0; - var source = "__p+='"; - text.replace(matcher, function(match, escape, interpolate, evaluate, offset) { - source += text.slice(index, offset).replace(escaper, escapeChar); - index = offset + match.length; - - if (escape) { - source += "'+\n((__t=(" + escape + "))==null?'':_.escape(__t))+\n'"; - } else if (interpolate) { - source += "'+\n((__t=(" + interpolate + "))==null?'':__t)+\n'"; - } else if (evaluate) { - source += "';\n" + evaluate + "\n__p+='"; - } - - // Adobe VMs need the match returned to produce the correct offest. - return match; - }); - source += "';\n"; - - // If a variable is not specified, place data values in local scope. - if (!settings.variable) source = 'with(obj||{}){\n' + source + '}\n'; - - source = "var __t,__p='',__j=Array.prototype.join," + - "print=function(){__p+=__j.call(arguments,'');};\n" + - source + 'return __p;\n'; - - try { - var render = new Function(settings.variable || 'obj', '_', source); - } catch (e) { - e.source = source; - throw e; - } - - var template = function(data) { - return render.call(this, data, _); - }; - - // Provide the compiled source as a convenience for precompilation. - var argument = settings.variable || 'obj'; - template.source = 'function(' + argument + '){\n' + source + '}'; - - return template; - }; - - // Add a "chain" function. Start chaining a wrapped Underscore object. - _.chain = function(obj) { - var instance = _(obj); - instance._chain = true; - return instance; - }; - - // OOP - // --------------- - // If Underscore is called as a function, it returns a wrapped object that - // can be used OO-style. This wrapper holds altered versions of all the - // underscore functions. Wrapped objects may be chained. - - // Helper function to continue chaining intermediate results. - var result = function(instance, obj) { - return instance._chain ? _(obj).chain() : obj; - }; - - // Add your own custom functions to the Underscore object. - _.mixin = function(obj) { - _.each(_.functions(obj), function(name) { - var func = _[name] = obj[name]; - _.prototype[name] = function() { - var args = [this._wrapped]; - push.apply(args, arguments); - return result(this, func.apply(_, args)); - }; - }); - }; - - // Add all of the Underscore functions to the wrapper object. - _.mixin(_); - - // Add all mutator Array functions to the wrapper. - _.each(['pop', 'push', 'reverse', 'shift', 'sort', 'splice', 'unshift'], function(name) { - var method = ArrayProto[name]; - _.prototype[name] = function() { - var obj = this._wrapped; - method.apply(obj, arguments); - if ((name === 'shift' || name === 'splice') && obj.length === 0) delete obj[0]; - return result(this, obj); - }; - }); - - // Add all accessor Array functions to the wrapper. - _.each(['concat', 'join', 'slice'], function(name) { - var method = ArrayProto[name]; - _.prototype[name] = function() { - return result(this, method.apply(this._wrapped, arguments)); - }; - }); - - // Extracts the result from a wrapped and chained object. - _.prototype.value = function() { - return this._wrapped; - }; - - // Provide unwrapping proxy for some methods used in engine operations - // such as arithmetic and JSON stringification. - _.prototype.valueOf = _.prototype.toJSON = _.prototype.value; - - _.prototype.toString = function() { - return '' + this._wrapped; - }; - - // AMD registration happens at the end for compatibility with AMD loaders - // that may not enforce next-turn semantics on modules. Even though general - // practice for AMD registration is to be anonymous, underscore registers - // as a named module because, like jQuery, it is a base library that is - // popular enough to be bundled in a third party lib, but not be part of - // an AMD load request. Those cases could generate an error when an - // anonymous define() is called outside of a loader request. - if (typeof define === 'function' && define.amd) { - define('underscore', [], function() { - return _; - }); - } -}.call(this)); - -},{}],26:[function(require,module,exports){ -arguments[4][19][0].apply(exports,arguments) -},{"dup":19}],27:[function(require,module,exports){ -module.exports = function isBuffer(arg) { - return arg && typeof arg === 'object' - && typeof arg.copy === 'function' - && typeof arg.fill === 'function' - && typeof arg.readUInt8 === 'function'; -} -},{}],28:[function(require,module,exports){ -(function (process,global){ -// Copyright Joyent, Inc. and other Node contributors. -// -// Permission is hereby granted, free of charge, to any person obtaining a -// copy of this software and associated documentation files (the -// "Software"), to deal in the Software without restriction, including -// without limitation the rights to use, copy, modify, merge, publish, -// distribute, sublicense, and/or sell copies of the Software, and to permit -// persons to whom the Software is furnished to do so, subject to the -// following conditions: -// -// The above copyright notice and this permission notice shall be included -// in all copies or substantial portions of the Software. -// -// THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS -// OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF -// MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN -// NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, -// DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR -// OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE -// USE OR OTHER DEALINGS IN THE SOFTWARE. - -var formatRegExp = /%[sdj%]/g; -exports.format = function(f) { - if (!isString(f)) { - var objects = []; - for (var i = 0; i < arguments.length; i++) { - objects.push(inspect(arguments[i])); - } - return objects.join(' '); - } - - var i = 1; - var args = arguments; - var len = args.length; - var str = String(f).replace(formatRegExp, function(x) { - if (x === '%%') return '%'; - if (i >= len) return x; - switch (x) { - case '%s': return String(args[i++]); - case '%d': return Number(args[i++]); - case '%j': - try { - return JSON.stringify(args[i++]); - } catch (_) { - return '[Circular]'; - } - default: - return x; - } - }); - for (var x = args[i]; i < len; x = args[++i]) { - if (isNull(x) || !isObject(x)) { - str += ' ' + x; - } else { - str += ' ' + inspect(x); - } - } - return str; -}; - - -// Mark that a method should not be used. -// Returns a modified function which warns once by default. -// If --no-deprecation is set, then it is a no-op. -exports.deprecate = function(fn, msg) { - // Allow for deprecating things in the process of starting up. - if (isUndefined(global.process)) { - return function() { - return exports.deprecate(fn, msg).apply(this, arguments); - }; - } - - if (process.noDeprecation === true) { - return fn; - } - - var warned = false; - function deprecated() { - if (!warned) { - if (process.throwDeprecation) { - throw new Error(msg); - } else if (process.traceDeprecation) { - console.trace(msg); - } else { - console.error(msg); - } - warned = true; - } - return fn.apply(this, arguments); - } - - return deprecated; -}; - - -var debugs = {}; -var debugEnviron; -exports.debuglog = function(set) { - if (isUndefined(debugEnviron)) - debugEnviron = process.env.NODE_DEBUG || ''; - set = set.toUpperCase(); - if (!debugs[set]) { - if (new RegExp('\\b' + set + '\\b', 'i').test(debugEnviron)) { - var pid = process.pid; - debugs[set] = function() { - var msg = exports.format.apply(exports, arguments); - console.error('%s %d: %s', set, pid, msg); - }; - } else { - debugs[set] = function() {}; - } - } - return debugs[set]; -}; - - -/** - * Echos the value of a value. Trys to print the value out - * in the best way possible given the different types. - * - * @param {Object} obj The object to print out. - * @param {Object} opts Optional options object that alters the output. - */ -/* legacy: obj, showHidden, depth, colors*/ -function inspect(obj, opts) { - // default options - var ctx = { - seen: [], - stylize: stylizeNoColor - }; - // legacy... - if (arguments.length >= 3) ctx.depth = arguments[2]; - if (arguments.length >= 4) ctx.colors = arguments[3]; - if (isBoolean(opts)) { - // legacy... - ctx.showHidden = opts; - } else if (opts) { - // got an "options" object - exports._extend(ctx, opts); - } - // set default options - if (isUndefined(ctx.showHidden)) ctx.showHidden = false; - if (isUndefined(ctx.depth)) ctx.depth = 2; - if (isUndefined(ctx.colors)) ctx.colors = false; - if (isUndefined(ctx.customInspect)) ctx.customInspect = true; - if (ctx.colors) ctx.stylize = stylizeWithColor; - return formatValue(ctx, obj, ctx.depth); -} -exports.inspect = inspect; - - -// http://en.wikipedia.org/wiki/ANSI_escape_code#graphics -inspect.colors = { - 'bold' : [1, 22], - 'italic' : [3, 23], - 'underline' : [4, 24], - 'inverse' : [7, 27], - 'white' : [37, 39], - 'grey' : [90, 39], - 'black' : [30, 39], - 'blue' : [34, 39], - 'cyan' : [36, 39], - 'green' : [32, 39], - 'magenta' : [35, 39], - 'red' : [31, 39], - 'yellow' : [33, 39] -}; - -// Don't use 'blue' not visible on cmd.exe -inspect.styles = { - 'special': 'cyan', - 'number': 'yellow', - 'boolean': 'yellow', - 'undefined': 'grey', - 'null': 'bold', - 'string': 'green', - 'date': 'magenta', - // "name": intentionally not styling - 'regexp': 'red' -}; - - -function stylizeWithColor(str, styleType) { - var style = inspect.styles[styleType]; - - if (style) { - return '\u001b[' + inspect.colors[style][0] + 'm' + str + - '\u001b[' + inspect.colors[style][1] + 'm'; - } else { - return str; - } -} - - -function stylizeNoColor(str, styleType) { - return str; -} - - -function arrayToHash(array) { - var hash = {}; - - array.forEach(function(val, idx) { - hash[val] = true; - }); - - return hash; -} - - -function formatValue(ctx, value, recurseTimes) { - // Provide a hook for user-specified inspect functions. - // Check that value is an object with an inspect function on it - if (ctx.customInspect && - value && - isFunction(value.inspect) && - // Filter out the util module, it's inspect function is special - value.inspect !== exports.inspect && - // Also filter out any prototype objects using the circular check. - !(value.constructor && value.constructor.prototype === value)) { - var ret = value.inspect(recurseTimes, ctx); - if (!isString(ret)) { - ret = formatValue(ctx, ret, recurseTimes); - } - return ret; - } - - // Primitive types cannot have properties - var primitive = formatPrimitive(ctx, value); - if (primitive) { - return primitive; - } - - // Look up the keys of the object. - var keys = Object.keys(value); - var visibleKeys = arrayToHash(keys); - - if (ctx.showHidden) { - keys = Object.getOwnPropertyNames(value); - } - - // IE doesn't make error fields non-enumerable - // http://msdn.microsoft.com/en-us/library/ie/dww52sbt(v=vs.94).aspx - if (isError(value) - && (keys.indexOf('message') >= 0 || keys.indexOf('description') >= 0)) { - return formatError(value); - } - - // Some type of object without properties can be shortcutted. - if (keys.length === 0) { - if (isFunction(value)) { - var name = value.name ? ': ' + value.name : ''; - return ctx.stylize('[Function' + name + ']', 'special'); - } - if (isRegExp(value)) { - return ctx.stylize(RegExp.prototype.toString.call(value), 'regexp'); - } - if (isDate(value)) { - return ctx.stylize(Date.prototype.toString.call(value), 'date'); - } - if (isError(value)) { - return formatError(value); - } - } - - var base = '', array = false, braces = ['{', '}']; - - // Make Array say that they are Array - if (isArray(value)) { - array = true; - braces = ['[', ']']; - } - - // Make functions say that they are functions - if (isFunction(value)) { - var n = value.name ? ': ' + value.name : ''; - base = ' [Function' + n + ']'; - } - - // Make RegExps say that they are RegExps - if (isRegExp(value)) { - base = ' ' + RegExp.prototype.toString.call(value); - } - - // Make dates with properties first say the date - if (isDate(value)) { - base = ' ' + Date.prototype.toUTCString.call(value); - } - - // Make error with message first say the error - if (isError(value)) { - base = ' ' + formatError(value); - } - - if (keys.length === 0 && (!array || value.length == 0)) { - return braces[0] + base + braces[1]; - } - - if (recurseTimes < 0) { - if (isRegExp(value)) { - return ctx.stylize(RegExp.prototype.toString.call(value), 'regexp'); - } else { - return ctx.stylize('[Object]', 'special'); - } - } - - ctx.seen.push(value); - - var output; - if (array) { - output = formatArray(ctx, value, recurseTimes, visibleKeys, keys); - } else { - output = keys.map(function(key) { - return formatProperty(ctx, value, recurseTimes, visibleKeys, key, array); - }); - } - - ctx.seen.pop(); - - return reduceToSingleString(output, base, braces); -} - - -function formatPrimitive(ctx, value) { - if (isUndefined(value)) - return ctx.stylize('undefined', 'undefined'); - if (isString(value)) { - var simple = '\'' + JSON.stringify(value).replace(/^"|"$/g, '') - .replace(/'/g, "\\'") - .replace(/\\"/g, '"') + '\''; - return ctx.stylize(simple, 'string'); - } - if (isNumber(value)) - return ctx.stylize('' + value, 'number'); - if (isBoolean(value)) - return ctx.stylize('' + value, 'boolean'); - // For some reason typeof null is "object", so special case here. - if (isNull(value)) - return ctx.stylize('null', 'null'); -} - - -function formatError(value) { - return '[' + Error.prototype.toString.call(value) + ']'; -} - - -function formatArray(ctx, value, recurseTimes, visibleKeys, keys) { - var output = []; - for (var i = 0, l = value.length; i < l; ++i) { - if (hasOwnProperty(value, String(i))) { - output.push(formatProperty(ctx, value, recurseTimes, visibleKeys, - String(i), true)); - } else { - output.push(''); - } - } - keys.forEach(function(key) { - if (!key.match(/^\d+$/)) { - output.push(formatProperty(ctx, value, recurseTimes, visibleKeys, - key, true)); - } - }); - return output; -} - - -function formatProperty(ctx, value, recurseTimes, visibleKeys, key, array) { - var name, str, desc; - desc = Object.getOwnPropertyDescriptor(value, key) || { value: value[key] }; - if (desc.get) { - if (desc.set) { - str = ctx.stylize('[Getter/Setter]', 'special'); - } else { - str = ctx.stylize('[Getter]', 'special'); - } - } else { - if (desc.set) { - str = ctx.stylize('[Setter]', 'special'); - } - } - if (!hasOwnProperty(visibleKeys, key)) { - name = '[' + key + ']'; - } - if (!str) { - if (ctx.seen.indexOf(desc.value) < 0) { - if (isNull(recurseTimes)) { - str = formatValue(ctx, desc.value, null); - } else { - str = formatValue(ctx, desc.value, recurseTimes - 1); - } - if (str.indexOf('\n') > -1) { - if (array) { - str = str.split('\n').map(function(line) { - return ' ' + line; - }).join('\n').substr(2); - } else { - str = '\n' + str.split('\n').map(function(line) { - return ' ' + line; - }).join('\n'); - } - } - } else { - str = ctx.stylize('[Circular]', 'special'); - } - } - if (isUndefined(name)) { - if (array && key.match(/^\d+$/)) { - return str; - } - name = JSON.stringify('' + key); - if (name.match(/^"([a-zA-Z_][a-zA-Z_0-9]*)"$/)) { - name = name.substr(1, name.length - 2); - name = ctx.stylize(name, 'name'); - } else { - name = name.replace(/'/g, "\\'") - .replace(/\\"/g, '"') - .replace(/(^"|"$)/g, "'"); - name = ctx.stylize(name, 'string'); - } - } - - return name + ': ' + str; -} - - -function reduceToSingleString(output, base, braces) { - var numLinesEst = 0; - var length = output.reduce(function(prev, cur) { - numLinesEst++; - if (cur.indexOf('\n') >= 0) numLinesEst++; - return prev + cur.replace(/\u001b\[\d\d?m/g, '').length + 1; - }, 0); - - if (length > 60) { - return braces[0] + - (base === '' ? '' : base + '\n ') + - ' ' + - output.join(',\n ') + - ' ' + - braces[1]; - } - - return braces[0] + base + ' ' + output.join(', ') + ' ' + braces[1]; -} - - -// NOTE: These type checking functions intentionally don't use `instanceof` -// because it is fragile and can be easily faked with `Object.create()`. -function isArray(ar) { - return Array.isArray(ar); -} -exports.isArray = isArray; - -function isBoolean(arg) { - return typeof arg === 'boolean'; -} -exports.isBoolean = isBoolean; - -function isNull(arg) { - return arg === null; -} -exports.isNull = isNull; - -function isNullOrUndefined(arg) { - return arg == null; -} -exports.isNullOrUndefined = isNullOrUndefined; - -function isNumber(arg) { - return typeof arg === 'number'; -} -exports.isNumber = isNumber; - -function isString(arg) { - return typeof arg === 'string'; -} -exports.isString = isString; - -function isSymbol(arg) { - return typeof arg === 'symbol'; -} -exports.isSymbol = isSymbol; - -function isUndefined(arg) { - return arg === void 0; -} -exports.isUndefined = isUndefined; - -function isRegExp(re) { - return isObject(re) && objectToString(re) === '[object RegExp]'; -} -exports.isRegExp = isRegExp; - -function isObject(arg) { - return typeof arg === 'object' && arg !== null; -} -exports.isObject = isObject; - -function isDate(d) { - return isObject(d) && objectToString(d) === '[object Date]'; -} -exports.isDate = isDate; - -function isError(e) { - return isObject(e) && - (objectToString(e) === '[object Error]' || e instanceof Error); -} -exports.isError = isError; - -function isFunction(arg) { - return typeof arg === 'function'; -} -exports.isFunction = isFunction; - -function isPrimitive(arg) { - return arg === null || - typeof arg === 'boolean' || - typeof arg === 'number' || - typeof arg === 'string' || - typeof arg === 'symbol' || // ES6 symbol - typeof arg === 'undefined'; -} -exports.isPrimitive = isPrimitive; - -exports.isBuffer = require('./support/isBuffer'); - -function objectToString(o) { - return Object.prototype.toString.call(o); -} - - -function pad(n) { - return n < 10 ? '0' + n.toString(10) : n.toString(10); -} - - -var months = ['Jan', 'Feb', 'Mar', 'Apr', 'May', 'Jun', 'Jul', 'Aug', 'Sep', - 'Oct', 'Nov', 'Dec']; - -// 26 Feb 16:19:34 -function timestamp() { - var d = new Date(); - var time = [pad(d.getHours()), - pad(d.getMinutes()), - pad(d.getSeconds())].join(':'); - return [d.getDate(), months[d.getMonth()], time].join(' '); -} - - -// log is just a thin wrapper to console.log that prepends a timestamp -exports.log = function() { - console.log('%s - %s', timestamp(), exports.format.apply(exports, arguments)); -}; - - -/** - * Inherit the prototype methods from one constructor into another. - * - * The Function.prototype.inherits from lang.js rewritten as a standalone - * function (not on Function.prototype). 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this.pos1&&(e.backup(),e.emit(t.QueryLexer.TERM)),e.ignore(),e.more())return t.QueryLexer.lexText},t.QueryLexer.lexEditDistance=function(e){return e.ignore(),e.acceptDigitRun(),e.emit(t.QueryLexer.EDIT_DISTANCE),t.QueryLexer.lexText},t.QueryLexer.lexBoost=function(e){return e.ignore(),e.acceptDigitRun(),e.emit(t.QueryLexer.BOOST),t.QueryLexer.lexText},t.QueryLexer.lexEOS=function(e){e.width()>0&&e.emit(t.QueryLexer.TERM)},t.QueryLexer.termSeparator=t.tokenizer.separator,t.QueryLexer.lexText=function(e){for(;;){var r=e.next();if(r==t.QueryLexer.EOS)return t.QueryLexer.lexEOS;if(r.charCodeAt(0)==92){e.escapeCharacter();continue}if(r==":")return t.QueryLexer.lexField;if(r=="~")return e.backup(),e.width()>0&&e.emit(t.QueryLexer.TERM),t.QueryLexer.lexEditDistance;if(r=="^")return e.backup(),e.width()>0&&e.emit(t.QueryLexer.TERM),t.QueryLexer.lexBoost;if(r=="+"&&e.width()===1||r=="-"&&e.width()===1)return e.emit(t.QueryLexer.PRESENCE),t.QueryLexer.lexText;if(r.match(t.QueryLexer.termSeparator))return t.QueryLexer.lexTerm}},t.QueryParser=function(e,r){this.lexer=new t.QueryLexer(e),this.query=r,this.currentClause={},this.lexemeIdx=0},t.QueryParser.prototype.parse=function(){this.lexer.run(),this.lexemes=this.lexer.lexemes;for(var e=t.QueryParser.parseClause;e;)e=e(this);return this.query},t.QueryParser.prototype.peekLexeme=function(){return this.lexemes[this.lexemeIdx]},t.QueryParser.prototype.consumeLexeme=function(){var e=this.peekLexeme();return this.lexemeIdx+=1,e},t.QueryParser.prototype.nextClause=function(){var e=this.currentClause;this.query.clause(e),this.currentClause={}},t.QueryParser.parseClause=function(e){var r=e.peekLexeme();if(r!=null)switch(r.type){case t.QueryLexer.PRESENCE:return t.QueryParser.parsePresence;case t.QueryLexer.FIELD:return t.QueryParser.parseField;case t.QueryLexer.TERM:return t.QueryParser.parseTerm;default:var n="expected either a field or a term, found "+r.type;throw r.str.length>=1&&(n+=" with value '"+r.str+"'"),new t.QueryParseError(n,r.start,r.end)}},t.QueryParser.parsePresence=function(e){var r=e.consumeLexeme();if(r!=null){switch(r.str){case"-":e.currentClause.presence=t.Query.presence.PROHIBITED;break;case"+":e.currentClause.presence=t.Query.presence.REQUIRED;break;default:var n="unrecognised presence operator'"+r.str+"'";throw new t.QueryParseError(n,r.start,r.end)}var i=e.peekLexeme();if(i==null){var n="expecting term or field, found nothing";throw new t.QueryParseError(n,r.start,r.end)}switch(i.type){case t.QueryLexer.FIELD:return t.QueryParser.parseField;case t.QueryLexer.TERM:return t.QueryParser.parseTerm;default:var n="expecting term or field, found '"+i.type+"'";throw new t.QueryParseError(n,i.start,i.end)}}},t.QueryParser.parseField=function(e){var r=e.consumeLexeme();if(r!=null){if(e.query.allFields.indexOf(r.str)==-1){var n=e.query.allFields.map(function(o){return"'"+o+"'"}).join(", "),i="unrecognised field '"+r.str+"', possible fields: "+n;throw new t.QueryParseError(i,r.start,r.end)}e.currentClause.fields=[r.str];var s=e.peekLexeme();if(s==null){var i="expecting term, found nothing";throw new t.QueryParseError(i,r.start,r.end)}switch(s.type){case t.QueryLexer.TERM:return t.QueryParser.parseTerm;default:var i="expecting term, found '"+s.type+"'";throw new t.QueryParseError(i,s.start,s.end)}}},t.QueryParser.parseTerm=function(e){var r=e.consumeLexeme();if(r!=null){e.currentClause.term=r.str.toLowerCase(),r.str.indexOf("*")!=-1&&(e.currentClause.usePipeline=!1);var n=e.peekLexeme();if(n==null){e.nextClause();return}switch(n.type){case t.QueryLexer.TERM:return e.nextClause(),t.QueryParser.parseTerm;case t.QueryLexer.FIELD:return e.nextClause(),t.QueryParser.parseField;case t.QueryLexer.EDIT_DISTANCE:return t.QueryParser.parseEditDistance;case t.QueryLexer.BOOST:return t.QueryParser.parseBoost;case t.QueryLexer.PRESENCE:return e.nextClause(),t.QueryParser.parsePresence;default:var i="Unexpected lexeme type '"+n.type+"'";throw new t.QueryParseError(i,n.start,n.end)}}},t.QueryParser.parseEditDistance=function(e){var r=e.consumeLexeme();if(r!=null){var n=parseInt(r.str,10);if(isNaN(n)){var i="edit distance must be numeric";throw new t.QueryParseError(i,r.start,r.end)}e.currentClause.editDistance=n;var s=e.peekLexeme();if(s==null){e.nextClause();return}switch(s.type){case t.QueryLexer.TERM:return e.nextClause(),t.QueryParser.parseTerm;case t.QueryLexer.FIELD:return e.nextClause(),t.QueryParser.parseField;case t.QueryLexer.EDIT_DISTANCE:return t.QueryParser.parseEditDistance;case t.QueryLexer.BOOST:return t.QueryParser.parseBoost;case t.QueryLexer.PRESENCE:return e.nextClause(),t.QueryParser.parsePresence;default:var i="Unexpected lexeme type '"+s.type+"'";throw new t.QueryParseError(i,s.start,s.end)}}},t.QueryParser.parseBoost=function(e){var r=e.consumeLexeme();if(r!=null){var n=parseInt(r.str,10);if(isNaN(n)){var i="boost must be numeric";throw new t.QueryParseError(i,r.start,r.end)}e.currentClause.boost=n;var s=e.peekLexeme();if(s==null){e.nextClause();return}switch(s.type){case t.QueryLexer.TERM:return e.nextClause(),t.QueryParser.parseTerm;case t.QueryLexer.FIELD:return e.nextClause(),t.QueryParser.parseField;case t.QueryLexer.EDIT_DISTANCE:return t.QueryParser.parseEditDistance;case t.QueryLexer.BOOST:return t.QueryParser.parseBoost;case t.QueryLexer.PRESENCE:return e.nextClause(),t.QueryParser.parsePresence;default:var i="Unexpected lexeme type '"+s.type+"'";throw new t.QueryParseError(i,s.start,s.end)}}},function(e,r){typeof define=="function"&&define.amd?define(r):typeof ee=="object"?te.exports=r():e.lunr=r()}(this,function(){return t})})()});var q=K((Re,ne)=>{"use strict";/*! - * escape-html - * Copyright(c) 2012-2013 TJ Holowaychuk - * Copyright(c) 2015 Andreas Lubbe - * Copyright(c) 2015 Tiancheng "Timothy" Gu - * MIT Licensed - */var Le=/["'&<>]/;ne.exports=we;function we(t){var e=""+t,r=Le.exec(e);if(!r)return e;var 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lunr.QueryParser(t,e).parse(),e.clauses}function ce(t,e){var i;let r=new Set(t),n={};for(let s=0;s!n.has(i)))]}var U=class{constructor({config:e,docs:r,options:n}){this.options=n,this.documents=se(r),this.highlight=ae(e,!1),lunr.tokenizer.separator=new RegExp(e.separator),this.index=lunr(function(){e.lang.length===1&&e.lang[0]!=="en"?this.use(lunr[e.lang[0]]):e.lang.length>1&&this.use(lunr.multiLanguage(...e.lang));let i=Ee(["trimmer","stopWordFilter","stemmer"],n.pipeline);for(let s of e.lang.map(o=>o==="en"?lunr:lunr[o]))for(let o of i)this.pipeline.remove(s[o]),this.searchPipeline.remove(s[o]);this.ref("location"),this.field("title",{boost:1e3}),this.field("text"),this.field("tags",{boost:1e6,extractor:s=>{let{tags:o=[]}=s;return o.reduce((a,u)=>[...a,...lunr.tokenizer(u)],[])}});for(let s of r)this.add(s,{boost:s.boost})})}search(e){if(e)try{let r=this.highlight(e),n=ue(e).filter(o=>o.presence!==lunr.Query.presence.PROHIBITED),i=this.index.search(`${e}*`).reduce((o,{ref:a,score:u,matchData:c})=>{let h=this.documents.get(a);if(typeof h!="undefined"){let{location:y,title:g,text:b,tags:m,parent:Q}=h,p=ce(n,Object.keys(c.metadata)),d=+!Q+ +Object.values(p).every(w=>w);o.push(Z(M({location:y,title:r(g),text:r(b)},m&&{tags:m.map(r)}),{score:u*(1+d),terms:p}))}return o},[]).sort((o,a)=>a.score-o.score).reduce((o,a)=>{let u=this.documents.get(a.location);if(typeof u!="undefined"){let c="parent"in u?u.parent.location:u.location;o.set(c,[...o.get(c)||[],a])}return o},new Map),s;if(this.options.suggestions){let o=this.index.query(a=>{for(let u of n)a.term(u.term,{fields:["title"],presence:lunr.Query.presence.REQUIRED,wildcard:lunr.Query.wildcard.TRAILING})});s=o.length?Object.keys(o[0].matchData.metadata):[]}return M({items:[...i.values()]},typeof s!="undefined"&&{suggestions:s})}catch(r){console.warn(`Invalid query: ${e} \u2013 see https://bit.ly/2s3ChXG`)}return{items:[]}}};var Y;function ke(t){return z(this,null,function*(){let e="../lunr";if(typeof parent!="undefined"&&"IFrameWorker"in parent){let n=document.querySelector("script[src]"),[i]=n.src.split("/worker");e=e.replace("..",i)}let r=[];for(let n of t.lang){switch(n){case"ja":r.push(`${e}/tinyseg.js`);break;case"hi":case"th":r.push(`${e}/wordcut.js`);break}n!=="en"&&r.push(`${e}/min/lunr.${n}.min.js`)}t.lang.length>1&&r.push(`${e}/min/lunr.multi.min.js`),r.length&&(yield importScripts(`${e}/min/lunr.stemmer.support.min.js`,...r))})}function Te(t){return z(this,null,function*(){switch(t.type){case 0:return yield ke(t.data.config),Y=new U(t.data),{type:1};case 2:return{type:3,data:Y?Y.search(t.data):{items:[]}};default:throw new TypeError("Invalid message type")}})}self.lunr=le.default;addEventListener("message",t=>z(void 0,null,function*(){postMessage(yield Te(t.data))}));})(); -//# sourceMappingURL=search.16e2a7d4.min.js.map - diff --git a/pr-preview/pr-10/assets/javascripts/workers/search.16e2a7d4.min.js.map b/pr-preview/pr-10/assets/javascripts/workers/search.16e2a7d4.min.js.map deleted file mode 100644 index fa01f37..0000000 --- a/pr-preview/pr-10/assets/javascripts/workers/search.16e2a7d4.min.js.map +++ /dev/null @@ -1,8 +0,0 @@ -{ - "version": 3, - "sources": ["node_modules/lunr/lunr.js", "node_modules/escape-html/index.js", "src/assets/javascripts/integrations/search/worker/main/index.ts", "src/assets/javascripts/polyfills/index.ts", "src/assets/javascripts/integrations/search/document/index.ts", "src/assets/javascripts/integrations/search/highlighter/index.ts", "src/assets/javascripts/integrations/search/query/_/index.ts", "src/assets/javascripts/integrations/search/_/index.ts"], - "sourceRoot": "../../../..", - "sourcesContent": ["/**\n * lunr - http://lunrjs.com - A bit like Solr, but much smaller and not as bright - 2.3.9\n * Copyright (C) 2020 Oliver Nightingale\n * @license MIT\n */\n\n;(function(){\n\n/**\n * A convenience function for configuring and constructing\n * a new lunr Index.\n *\n * A lunr.Builder instance is created and the pipeline setup\n * with a trimmer, stop word filter and stemmer.\n *\n * This builder object is yielded to the configuration function\n * that is passed as a parameter, allowing the list of fields\n * and other builder parameters to be customised.\n *\n * All documents _must_ be added within the passed config function.\n *\n * @example\n * var idx = lunr(function () {\n * this.field('title')\n * this.field('body')\n * this.ref('id')\n *\n * documents.forEach(function (doc) {\n * this.add(doc)\n * }, this)\n * })\n *\n * @see {@link lunr.Builder}\n * @see {@link lunr.Pipeline}\n * @see {@link lunr.trimmer}\n * @see {@link lunr.stopWordFilter}\n * @see {@link lunr.stemmer}\n * @namespace {function} lunr\n */\nvar lunr = function (config) {\n var builder = new lunr.Builder\n\n builder.pipeline.add(\n lunr.trimmer,\n lunr.stopWordFilter,\n lunr.stemmer\n )\n\n builder.searchPipeline.add(\n lunr.stemmer\n )\n\n config.call(builder, builder)\n return builder.build()\n}\n\nlunr.version = \"2.3.9\"\n/*!\n * lunr.utils\n * Copyright (C) 2020 Oliver Nightingale\n */\n\n/**\n * A namespace containing utils for the rest of the lunr library\n * @namespace lunr.utils\n */\nlunr.utils = {}\n\n/**\n * Print a warning message to the console.\n *\n * @param {String} message The message to be printed.\n * @memberOf lunr.utils\n * @function\n */\nlunr.utils.warn = (function (global) {\n /* eslint-disable no-console */\n return function (message) {\n if (global.console && console.warn) {\n console.warn(message)\n }\n }\n /* eslint-enable no-console */\n})(this)\n\n/**\n * Convert an object to a string.\n *\n * In the case of `null` and `undefined` the function returns\n * the empty string, in all other cases the result of calling\n * `toString` on the passed object is returned.\n *\n * @param {Any} obj The object to convert to a string.\n * @return {String} string representation of the passed object.\n * @memberOf lunr.utils\n */\nlunr.utils.asString = function (obj) {\n if (obj === void 0 || obj === null) {\n return \"\"\n } else {\n return obj.toString()\n }\n}\n\n/**\n * Clones an object.\n *\n * Will create a copy of an existing object such that any mutations\n * on the copy cannot affect the original.\n *\n * Only shallow objects are supported, passing a nested object to this\n * function will cause a TypeError.\n *\n * Objects with primitives, and arrays of primitives are supported.\n *\n * @param {Object} obj The object to clone.\n * @return {Object} a clone of the passed object.\n * @throws {TypeError} when a nested object is passed.\n * @memberOf Utils\n */\nlunr.utils.clone = function (obj) {\n if (obj === null || obj === undefined) {\n return obj\n }\n\n var clone = Object.create(null),\n keys = Object.keys(obj)\n\n for (var i = 0; i < keys.length; i++) {\n var key = keys[i],\n val = obj[key]\n\n if (Array.isArray(val)) {\n clone[key] = val.slice()\n continue\n }\n\n if (typeof val === 'string' ||\n typeof val === 'number' ||\n typeof val === 'boolean') {\n clone[key] = val\n continue\n }\n\n throw new TypeError(\"clone is not deep and does not support nested objects\")\n }\n\n return clone\n}\nlunr.FieldRef = function (docRef, fieldName, stringValue) {\n this.docRef = docRef\n this.fieldName = fieldName\n this._stringValue = stringValue\n}\n\nlunr.FieldRef.joiner = \"/\"\n\nlunr.FieldRef.fromString = function (s) {\n var n = s.indexOf(lunr.FieldRef.joiner)\n\n if (n === -1) {\n throw \"malformed field ref string\"\n }\n\n var fieldRef = s.slice(0, n),\n docRef = s.slice(n + 1)\n\n return new lunr.FieldRef (docRef, fieldRef, s)\n}\n\nlunr.FieldRef.prototype.toString = function () {\n if (this._stringValue == undefined) {\n this._stringValue = this.fieldName + lunr.FieldRef.joiner + this.docRef\n }\n\n return this._stringValue\n}\n/*!\n * lunr.Set\n * Copyright (C) 2020 Oliver Nightingale\n */\n\n/**\n * A lunr set.\n *\n * @constructor\n */\nlunr.Set = function (elements) {\n this.elements = Object.create(null)\n\n if (elements) {\n this.length = elements.length\n\n for (var i = 0; i < this.length; i++) {\n this.elements[elements[i]] = true\n }\n } else {\n this.length = 0\n }\n}\n\n/**\n * A complete set that contains all elements.\n *\n * @static\n * @readonly\n * @type {lunr.Set}\n */\nlunr.Set.complete = {\n intersect: function (other) {\n return other\n },\n\n union: function () {\n return this\n },\n\n contains: function () {\n return true\n }\n}\n\n/**\n * An empty set that contains no elements.\n *\n * @static\n * @readonly\n * @type {lunr.Set}\n */\nlunr.Set.empty = {\n intersect: function () {\n return this\n },\n\n union: function (other) {\n return other\n },\n\n contains: function () {\n return false\n }\n}\n\n/**\n * Returns true if this set contains the specified object.\n *\n * @param {object} object - Object whose presence in this set is to be tested.\n * @returns {boolean} - True if this set contains the specified object.\n */\nlunr.Set.prototype.contains = function (object) {\n return !!this.elements[object]\n}\n\n/**\n * Returns a new set containing only the elements that are present in both\n * this set and the specified set.\n *\n * @param {lunr.Set} other - set to intersect with this set.\n * @returns {lunr.Set} a new set that is the intersection of this and the specified set.\n */\n\nlunr.Set.prototype.intersect = function (other) {\n var a, b, elements, intersection = []\n\n if (other === lunr.Set.complete) {\n return this\n }\n\n if (other === lunr.Set.empty) {\n return other\n }\n\n if (this.length < other.length) {\n a = this\n b = other\n } else {\n a = other\n b = this\n }\n\n elements = Object.keys(a.elements)\n\n for (var i = 0; i < elements.length; i++) {\n var element = elements[i]\n if (element in b.elements) {\n intersection.push(element)\n }\n }\n\n return new lunr.Set (intersection)\n}\n\n/**\n * Returns a new set combining the elements of this and the specified set.\n *\n * @param {lunr.Set} other - set to union with this set.\n * @return {lunr.Set} a new set that is the union of this and the specified set.\n */\n\nlunr.Set.prototype.union = function (other) {\n if (other === lunr.Set.complete) {\n return lunr.Set.complete\n }\n\n if (other === lunr.Set.empty) {\n return this\n }\n\n return new lunr.Set(Object.keys(this.elements).concat(Object.keys(other.elements)))\n}\n/**\n * A function to calculate the inverse document frequency for\n * a posting. This is shared between the builder and the index\n *\n * @private\n * @param {object} posting - The posting for a given term\n * @param {number} documentCount - The total number of documents.\n */\nlunr.idf = function (posting, documentCount) {\n var documentsWithTerm = 0\n\n for (var fieldName in posting) {\n if (fieldName == '_index') continue // Ignore the term index, its not a field\n documentsWithTerm += Object.keys(posting[fieldName]).length\n }\n\n var x = (documentCount - documentsWithTerm + 0.5) / (documentsWithTerm + 0.5)\n\n return Math.log(1 + Math.abs(x))\n}\n\n/**\n * A token wraps a string representation of a token\n * as it is passed through the text processing pipeline.\n *\n * @constructor\n * @param {string} [str=''] - The string token being wrapped.\n * @param {object} [metadata={}] - Metadata associated with this token.\n */\nlunr.Token = function (str, metadata) {\n this.str = str || \"\"\n this.metadata = metadata || {}\n}\n\n/**\n * Returns the token string that is being wrapped by this object.\n *\n * @returns {string}\n */\nlunr.Token.prototype.toString = function () {\n return this.str\n}\n\n/**\n * A token update function is used when updating or optionally\n * when cloning a token.\n *\n * @callback lunr.Token~updateFunction\n * @param {string} str - The string representation of the token.\n * @param {Object} metadata - All metadata associated with this token.\n */\n\n/**\n * Applies the given function to the wrapped string token.\n *\n * @example\n * token.update(function (str, metadata) {\n * return str.toUpperCase()\n * })\n *\n * @param {lunr.Token~updateFunction} fn - A function to apply to the token string.\n * @returns {lunr.Token}\n */\nlunr.Token.prototype.update = function (fn) {\n this.str = fn(this.str, this.metadata)\n return this\n}\n\n/**\n * Creates a clone of this token. Optionally a function can be\n * applied to the cloned token.\n *\n * @param {lunr.Token~updateFunction} [fn] - An optional function to apply to the cloned token.\n * @returns {lunr.Token}\n */\nlunr.Token.prototype.clone = function (fn) {\n fn = fn || function (s) { return s }\n return new lunr.Token (fn(this.str, this.metadata), this.metadata)\n}\n/*!\n * lunr.tokenizer\n * Copyright (C) 2020 Oliver Nightingale\n */\n\n/**\n * A function for splitting a string into tokens ready to be inserted into\n * the search index. Uses `lunr.tokenizer.separator` to split strings, change\n * the value of this property to change how strings are split into tokens.\n *\n * This tokenizer will convert its parameter to a string by calling `toString` and\n * then will split this string on the character in `lunr.tokenizer.separator`.\n * Arrays will have their elements converted to strings and wrapped in a lunr.Token.\n *\n * Optional metadata can be passed to the tokenizer, this metadata will be cloned and\n * added as metadata to every token that is created from the object to be tokenized.\n *\n * @static\n * @param {?(string|object|object[])} obj - The object to convert into tokens\n * @param {?object} metadata - Optional metadata to associate with every token\n * @returns {lunr.Token[]}\n * @see {@link lunr.Pipeline}\n */\nlunr.tokenizer = function (obj, metadata) {\n if (obj == null || obj == undefined) {\n return []\n }\n\n if (Array.isArray(obj)) {\n return obj.map(function (t) {\n return new lunr.Token(\n lunr.utils.asString(t).toLowerCase(),\n lunr.utils.clone(metadata)\n )\n })\n }\n\n var str = obj.toString().toLowerCase(),\n len = str.length,\n tokens = []\n\n for (var sliceEnd = 0, sliceStart = 0; sliceEnd <= len; sliceEnd++) {\n var char = str.charAt(sliceEnd),\n sliceLength = sliceEnd - sliceStart\n\n if ((char.match(lunr.tokenizer.separator) || sliceEnd == len)) {\n\n if (sliceLength > 0) {\n var tokenMetadata = lunr.utils.clone(metadata) || {}\n tokenMetadata[\"position\"] = [sliceStart, sliceLength]\n tokenMetadata[\"index\"] = tokens.length\n\n tokens.push(\n new lunr.Token (\n str.slice(sliceStart, sliceEnd),\n tokenMetadata\n )\n )\n }\n\n sliceStart = sliceEnd + 1\n }\n\n }\n\n return tokens\n}\n\n/**\n * The separator used to split a string into tokens. Override this property to change the behaviour of\n * `lunr.tokenizer` behaviour when tokenizing strings. By default this splits on whitespace and hyphens.\n *\n * @static\n * @see lunr.tokenizer\n */\nlunr.tokenizer.separator = /[\\s\\-]+/\n/*!\n * lunr.Pipeline\n * Copyright (C) 2020 Oliver Nightingale\n */\n\n/**\n * lunr.Pipelines maintain an ordered list of functions to be applied to all\n * tokens in documents entering the search index and queries being ran against\n * the index.\n *\n * An instance of lunr.Index created with the lunr shortcut will contain a\n * pipeline with a stop word filter and an English language stemmer. Extra\n * functions can be added before or after either of these functions or these\n * default functions can be removed.\n *\n * When run the pipeline will call each function in turn, passing a token, the\n * index of that token in the original list of all tokens and finally a list of\n * all the original tokens.\n *\n * The output of functions in the pipeline will be passed to the next function\n * in the pipeline. To exclude a token from entering the index the function\n * should return undefined, the rest of the pipeline will not be called with\n * this token.\n *\n * For serialisation of pipelines to work, all functions used in an instance of\n * a pipeline should be registered with lunr.Pipeline. Registered functions can\n * then be loaded. If trying to load a serialised pipeline that uses functions\n * that are not registered an error will be thrown.\n *\n * If not planning on serialising the pipeline then registering pipeline functions\n * is not necessary.\n *\n * @constructor\n */\nlunr.Pipeline = function () {\n this._stack = []\n}\n\nlunr.Pipeline.registeredFunctions = Object.create(null)\n\n/**\n * A pipeline function maps lunr.Token to lunr.Token. A lunr.Token contains the token\n * string as well as all known metadata. A pipeline function can mutate the token string\n * or mutate (or add) metadata for a given token.\n *\n * A pipeline function can indicate that the passed token should be discarded by returning\n * null, undefined or an empty string. This token will not be passed to any downstream pipeline\n * functions and will not be added to the index.\n *\n * Multiple tokens can be returned by returning an array of tokens. Each token will be passed\n * to any downstream pipeline functions and all will returned tokens will be added to the index.\n *\n * Any number of pipeline functions may be chained together using a lunr.Pipeline.\n *\n * @interface lunr.PipelineFunction\n * @param {lunr.Token} token - A token from the document being processed.\n * @param {number} i - The index of this token in the complete list of tokens for this document/field.\n * @param {lunr.Token[]} tokens - All tokens for this document/field.\n * @returns {(?lunr.Token|lunr.Token[])}\n */\n\n/**\n * Register a function with the pipeline.\n *\n * Functions that are used in the pipeline should be registered if the pipeline\n * needs to be serialised, or a serialised pipeline needs to be loaded.\n *\n * Registering a function does not add it to a pipeline, functions must still be\n * added to instances of the pipeline for them to be used when running a pipeline.\n *\n * @param {lunr.PipelineFunction} fn - The function to check for.\n * @param {String} label - The label to register this function with\n */\nlunr.Pipeline.registerFunction = function (fn, label) {\n if (label in this.registeredFunctions) {\n lunr.utils.warn('Overwriting existing registered function: ' + label)\n }\n\n fn.label = label\n lunr.Pipeline.registeredFunctions[fn.label] = fn\n}\n\n/**\n * Warns if the function is not registered as a Pipeline function.\n *\n * @param {lunr.PipelineFunction} fn - The function to check for.\n * @private\n */\nlunr.Pipeline.warnIfFunctionNotRegistered = function (fn) {\n var isRegistered = fn.label && (fn.label in this.registeredFunctions)\n\n if (!isRegistered) {\n lunr.utils.warn('Function is not registered with pipeline. This may cause problems when serialising the index.\\n', fn)\n }\n}\n\n/**\n * Loads a previously serialised pipeline.\n *\n * All functions to be loaded must already be registered with lunr.Pipeline.\n * If any function from the serialised data has not been registered then an\n * error will be thrown.\n *\n * @param {Object} serialised - The serialised pipeline to load.\n * @returns {lunr.Pipeline}\n */\nlunr.Pipeline.load = function (serialised) {\n var pipeline = new lunr.Pipeline\n\n serialised.forEach(function (fnName) {\n var fn = lunr.Pipeline.registeredFunctions[fnName]\n\n if (fn) {\n pipeline.add(fn)\n } else {\n throw new Error('Cannot load unregistered function: ' + fnName)\n }\n })\n\n return pipeline\n}\n\n/**\n * Adds new functions to the end of the pipeline.\n *\n * Logs a warning if the function has not been registered.\n *\n * @param {lunr.PipelineFunction[]} functions - Any number of functions to add to the pipeline.\n */\nlunr.Pipeline.prototype.add = function () {\n var fns = Array.prototype.slice.call(arguments)\n\n fns.forEach(function (fn) {\n lunr.Pipeline.warnIfFunctionNotRegistered(fn)\n this._stack.push(fn)\n }, this)\n}\n\n/**\n * Adds a single function after a function that already exists in the\n * pipeline.\n *\n * Logs a warning if the function has not been registered.\n *\n * @param {lunr.PipelineFunction} existingFn - A function that already exists in the pipeline.\n * @param {lunr.PipelineFunction} newFn - The new function to add to the pipeline.\n */\nlunr.Pipeline.prototype.after = function (existingFn, newFn) {\n lunr.Pipeline.warnIfFunctionNotRegistered(newFn)\n\n var pos = this._stack.indexOf(existingFn)\n if (pos == -1) {\n throw new Error('Cannot find existingFn')\n }\n\n pos = pos + 1\n this._stack.splice(pos, 0, newFn)\n}\n\n/**\n * Adds a single function before a function that already exists in the\n * pipeline.\n *\n * Logs a warning if the function has not been registered.\n *\n * @param {lunr.PipelineFunction} existingFn - A function that already exists in the pipeline.\n * @param {lunr.PipelineFunction} newFn - The new function to add to the pipeline.\n */\nlunr.Pipeline.prototype.before = function (existingFn, newFn) {\n lunr.Pipeline.warnIfFunctionNotRegistered(newFn)\n\n var pos = this._stack.indexOf(existingFn)\n if (pos == -1) {\n throw new Error('Cannot find existingFn')\n }\n\n this._stack.splice(pos, 0, newFn)\n}\n\n/**\n * Removes a function from the pipeline.\n *\n * @param {lunr.PipelineFunction} fn The function to remove from the pipeline.\n */\nlunr.Pipeline.prototype.remove = function (fn) {\n var pos = this._stack.indexOf(fn)\n if (pos == -1) {\n return\n }\n\n this._stack.splice(pos, 1)\n}\n\n/**\n * Runs the current list of functions that make up the pipeline against the\n * passed tokens.\n *\n * @param {Array} tokens The tokens to run through the pipeline.\n * @returns {Array}\n */\nlunr.Pipeline.prototype.run = function (tokens) {\n var stackLength = this._stack.length\n\n for (var i = 0; i < stackLength; i++) {\n var fn = this._stack[i]\n var memo = []\n\n for (var j = 0; j < tokens.length; j++) {\n var result = fn(tokens[j], j, tokens)\n\n if (result === null || result === void 0 || result === '') continue\n\n if (Array.isArray(result)) {\n for (var k = 0; k < result.length; k++) {\n memo.push(result[k])\n }\n } else {\n memo.push(result)\n }\n }\n\n tokens = memo\n }\n\n return tokens\n}\n\n/**\n * Convenience method for passing a string through a pipeline and getting\n * strings out. This method takes care of wrapping the passed string in a\n * token and mapping the resulting tokens back to strings.\n *\n * @param {string} str - The string to pass through the pipeline.\n * @param {?object} metadata - Optional metadata to associate with the token\n * passed to the pipeline.\n * @returns {string[]}\n */\nlunr.Pipeline.prototype.runString = function (str, metadata) {\n var token = new lunr.Token (str, metadata)\n\n return this.run([token]).map(function (t) {\n return t.toString()\n })\n}\n\n/**\n * Resets the pipeline by removing any existing processors.\n *\n */\nlunr.Pipeline.prototype.reset = function () {\n this._stack = []\n}\n\n/**\n * Returns a representation of the pipeline ready for serialisation.\n *\n * Logs a warning if the function has not been registered.\n *\n * @returns {Array}\n */\nlunr.Pipeline.prototype.toJSON = function () {\n return this._stack.map(function (fn) {\n lunr.Pipeline.warnIfFunctionNotRegistered(fn)\n\n return fn.label\n })\n}\n/*!\n * lunr.Vector\n * Copyright (C) 2020 Oliver Nightingale\n */\n\n/**\n * A vector is used to construct the vector space of documents and queries. These\n * vectors support operations to determine the similarity between two documents or\n * a document and a query.\n *\n * Normally no parameters are required for initializing a vector, but in the case of\n * loading a previously dumped vector the raw elements can be provided to the constructor.\n *\n * For performance reasons vectors are implemented with a flat array, where an elements\n * index is immediately followed by its value. E.g. [index, value, index, value]. This\n * allows the underlying array to be as sparse as possible and still offer decent\n * performance when being used for vector calculations.\n *\n * @constructor\n * @param {Number[]} [elements] - The flat list of element index and element value pairs.\n */\nlunr.Vector = function (elements) {\n this._magnitude = 0\n this.elements = elements || []\n}\n\n\n/**\n * Calculates the position within the vector to insert a given index.\n *\n * This is used internally by insert and upsert. If there are duplicate indexes then\n * the position is returned as if the value for that index were to be updated, but it\n * is the callers responsibility to check whether there is a duplicate at that index\n *\n * @param {Number} insertIdx - The index at which the element should be inserted.\n * @returns {Number}\n */\nlunr.Vector.prototype.positionForIndex = function (index) {\n // For an empty vector the tuple can be inserted at the beginning\n if (this.elements.length == 0) {\n return 0\n }\n\n var start = 0,\n end = this.elements.length / 2,\n sliceLength = end - start,\n pivotPoint = Math.floor(sliceLength / 2),\n pivotIndex = this.elements[pivotPoint * 2]\n\n while (sliceLength > 1) {\n if (pivotIndex < index) {\n start = pivotPoint\n }\n\n if (pivotIndex > index) {\n end = pivotPoint\n }\n\n if (pivotIndex == index) {\n break\n }\n\n sliceLength = end - start\n pivotPoint = start + Math.floor(sliceLength / 2)\n pivotIndex = this.elements[pivotPoint * 2]\n }\n\n if (pivotIndex == index) {\n return pivotPoint * 2\n }\n\n if (pivotIndex > index) {\n return pivotPoint * 2\n }\n\n if (pivotIndex < index) {\n return (pivotPoint + 1) * 2\n }\n}\n\n/**\n * Inserts an element at an index within the vector.\n *\n * Does not allow duplicates, will throw an error if there is already an entry\n * for this index.\n *\n * @param {Number} insertIdx - The index at which the element should be inserted.\n * @param {Number} val - The value to be inserted into the vector.\n */\nlunr.Vector.prototype.insert = function (insertIdx, val) {\n this.upsert(insertIdx, val, function () {\n throw \"duplicate index\"\n })\n}\n\n/**\n * Inserts or updates an existing index within the vector.\n *\n * @param {Number} insertIdx - The index at which the element should be inserted.\n * @param {Number} val - The value to be inserted into the vector.\n * @param {function} fn - A function that is called for updates, the existing value and the\n * requested value are passed as arguments\n */\nlunr.Vector.prototype.upsert = function (insertIdx, val, fn) {\n this._magnitude = 0\n var position = this.positionForIndex(insertIdx)\n\n if (this.elements[position] == insertIdx) {\n this.elements[position + 1] = fn(this.elements[position + 1], val)\n } else {\n this.elements.splice(position, 0, insertIdx, val)\n }\n}\n\n/**\n * Calculates the magnitude of this vector.\n *\n * @returns {Number}\n */\nlunr.Vector.prototype.magnitude = function () {\n if (this._magnitude) return this._magnitude\n\n var sumOfSquares = 0,\n elementsLength = this.elements.length\n\n for (var i = 1; i < elementsLength; i += 2) {\n var val = this.elements[i]\n sumOfSquares += val * val\n }\n\n return this._magnitude = Math.sqrt(sumOfSquares)\n}\n\n/**\n * Calculates the dot product of this vector and another vector.\n *\n * @param {lunr.Vector} otherVector - The vector to compute the dot product with.\n * @returns {Number}\n */\nlunr.Vector.prototype.dot = function (otherVector) {\n var dotProduct = 0,\n a = this.elements, b = otherVector.elements,\n aLen = a.length, bLen = b.length,\n aVal = 0, bVal = 0,\n i = 0, j = 0\n\n while (i < aLen && j < bLen) {\n aVal = a[i], bVal = b[j]\n if (aVal < bVal) {\n i += 2\n } else if (aVal > bVal) {\n j += 2\n } else if (aVal == bVal) {\n dotProduct += a[i + 1] * b[j + 1]\n i += 2\n j += 2\n }\n }\n\n return dotProduct\n}\n\n/**\n * Calculates the similarity between this vector and another vector.\n *\n * @param {lunr.Vector} otherVector - The other vector to calculate the\n * similarity with.\n * @returns {Number}\n */\nlunr.Vector.prototype.similarity = function (otherVector) {\n return this.dot(otherVector) / this.magnitude() || 0\n}\n\n/**\n * Converts the vector to an array of the elements within the vector.\n *\n * @returns {Number[]}\n */\nlunr.Vector.prototype.toArray = function () {\n var output = new Array (this.elements.length / 2)\n\n for (var i = 1, j = 0; i < this.elements.length; i += 2, j++) {\n output[j] = this.elements[i]\n }\n\n return output\n}\n\n/**\n * A JSON serializable representation of the vector.\n *\n * @returns {Number[]}\n */\nlunr.Vector.prototype.toJSON = function () {\n return this.elements\n}\n/* eslint-disable */\n/*!\n * lunr.stemmer\n * Copyright (C) 2020 Oliver Nightingale\n * Includes code from - http://tartarus.org/~martin/PorterStemmer/js.txt\n */\n\n/**\n * lunr.stemmer is an english language stemmer, this is a JavaScript\n * implementation of the PorterStemmer taken from http://tartarus.org/~martin\n *\n * @static\n * @implements {lunr.PipelineFunction}\n * @param {lunr.Token} token - The string to stem\n * @returns {lunr.Token}\n * @see {@link lunr.Pipeline}\n * @function\n */\nlunr.stemmer = (function(){\n var step2list = {\n \"ational\" : \"ate\",\n \"tional\" : \"tion\",\n \"enci\" : \"ence\",\n \"anci\" : \"ance\",\n \"izer\" : \"ize\",\n \"bli\" : \"ble\",\n \"alli\" : \"al\",\n \"entli\" : \"ent\",\n \"eli\" : \"e\",\n \"ousli\" : \"ous\",\n \"ization\" : \"ize\",\n \"ation\" : \"ate\",\n \"ator\" : \"ate\",\n \"alism\" : \"al\",\n \"iveness\" : \"ive\",\n \"fulness\" : \"ful\",\n \"ousness\" : \"ous\",\n \"aliti\" : \"al\",\n \"iviti\" : \"ive\",\n \"biliti\" : \"ble\",\n \"logi\" : \"log\"\n },\n\n step3list = {\n \"icate\" : \"ic\",\n \"ative\" : \"\",\n \"alize\" : \"al\",\n \"iciti\" : \"ic\",\n \"ical\" : \"ic\",\n \"ful\" : \"\",\n \"ness\" : \"\"\n },\n\n c = \"[^aeiou]\", // consonant\n v = \"[aeiouy]\", // vowel\n C = c + \"[^aeiouy]*\", // consonant sequence\n V = v + \"[aeiou]*\", // vowel sequence\n\n mgr0 = \"^(\" + C + \")?\" + V + C, // [C]VC... is m>0\n meq1 = \"^(\" + C + \")?\" + V + C + \"(\" + V + \")?$\", // [C]VC[V] is m=1\n mgr1 = \"^(\" + C + \")?\" + V + C + V + C, // [C]VCVC... is m>1\n s_v = \"^(\" + C + \")?\" + v; // vowel in stem\n\n var re_mgr0 = new RegExp(mgr0);\n var re_mgr1 = new RegExp(mgr1);\n var re_meq1 = new RegExp(meq1);\n var re_s_v = new RegExp(s_v);\n\n var re_1a = /^(.+?)(ss|i)es$/;\n var re2_1a = /^(.+?)([^s])s$/;\n var re_1b = /^(.+?)eed$/;\n var re2_1b = /^(.+?)(ed|ing)$/;\n var re_1b_2 = /.$/;\n var re2_1b_2 = /(at|bl|iz)$/;\n var re3_1b_2 = new RegExp(\"([^aeiouylsz])\\\\1$\");\n var re4_1b_2 = new RegExp(\"^\" + C + v + \"[^aeiouwxy]$\");\n\n var re_1c = /^(.+?[^aeiou])y$/;\n var re_2 = /^(.+?)(ational|tional|enci|anci|izer|bli|alli|entli|eli|ousli|ization|ation|ator|alism|iveness|fulness|ousness|aliti|iviti|biliti|logi)$/;\n\n var re_3 = /^(.+?)(icate|ative|alize|iciti|ical|ful|ness)$/;\n\n var re_4 = /^(.+?)(al|ance|ence|er|ic|able|ible|ant|ement|ment|ent|ou|ism|ate|iti|ous|ive|ize)$/;\n var re2_4 = /^(.+?)(s|t)(ion)$/;\n\n var re_5 = /^(.+?)e$/;\n var re_5_1 = /ll$/;\n var re3_5 = new RegExp(\"^\" + C + v + \"[^aeiouwxy]$\");\n\n var porterStemmer = function porterStemmer(w) {\n var stem,\n suffix,\n firstch,\n re,\n re2,\n re3,\n re4;\n\n if (w.length < 3) { return w; }\n\n firstch = w.substr(0,1);\n if (firstch == \"y\") {\n w = firstch.toUpperCase() + w.substr(1);\n }\n\n // Step 1a\n re = re_1a\n re2 = re2_1a;\n\n if (re.test(w)) { w = w.replace(re,\"$1$2\"); }\n else if (re2.test(w)) { w = w.replace(re2,\"$1$2\"); }\n\n // Step 1b\n re = re_1b;\n re2 = re2_1b;\n if (re.test(w)) {\n var fp = re.exec(w);\n re = re_mgr0;\n if (re.test(fp[1])) {\n re = re_1b_2;\n w = w.replace(re,\"\");\n }\n } else if (re2.test(w)) {\n var fp = re2.exec(w);\n stem = fp[1];\n re2 = re_s_v;\n if (re2.test(stem)) {\n w = stem;\n re2 = re2_1b_2;\n re3 = re3_1b_2;\n re4 = re4_1b_2;\n if (re2.test(w)) { w = w + \"e\"; }\n else if (re3.test(w)) { re = re_1b_2; w = w.replace(re,\"\"); }\n else if (re4.test(w)) { w = w + \"e\"; }\n }\n }\n\n // Step 1c - replace suffix y or Y by i if preceded by a non-vowel which is not the first letter of the word (so cry -> cri, by -> by, say -> say)\n re = re_1c;\n if (re.test(w)) {\n var fp = re.exec(w);\n stem = fp[1];\n w = stem + \"i\";\n }\n\n // Step 2\n re = re_2;\n if (re.test(w)) {\n var fp = re.exec(w);\n stem = fp[1];\n suffix = fp[2];\n re = re_mgr0;\n if (re.test(stem)) {\n w = stem + step2list[suffix];\n }\n }\n\n // Step 3\n re = re_3;\n if (re.test(w)) {\n var fp = re.exec(w);\n stem = fp[1];\n suffix = fp[2];\n re = re_mgr0;\n if (re.test(stem)) {\n w = stem + step3list[suffix];\n }\n }\n\n // Step 4\n re = re_4;\n re2 = re2_4;\n if (re.test(w)) {\n var fp = re.exec(w);\n stem = fp[1];\n re = re_mgr1;\n if (re.test(stem)) {\n w = stem;\n }\n } else if (re2.test(w)) {\n var fp = re2.exec(w);\n stem = fp[1] + fp[2];\n re2 = re_mgr1;\n if (re2.test(stem)) {\n w = stem;\n }\n }\n\n // Step 5\n re = re_5;\n if (re.test(w)) {\n var fp = re.exec(w);\n stem = fp[1];\n re = re_mgr1;\n re2 = re_meq1;\n re3 = re3_5;\n if (re.test(stem) || (re2.test(stem) && !(re3.test(stem)))) {\n w = stem;\n }\n }\n\n re = re_5_1;\n re2 = re_mgr1;\n if (re.test(w) && re2.test(w)) {\n re = re_1b_2;\n w = w.replace(re,\"\");\n }\n\n // and turn initial Y back to y\n\n if (firstch == \"y\") {\n w = firstch.toLowerCase() + w.substr(1);\n }\n\n return w;\n };\n\n return function (token) {\n return token.update(porterStemmer);\n }\n})();\n\nlunr.Pipeline.registerFunction(lunr.stemmer, 'stemmer')\n/*!\n * lunr.stopWordFilter\n * Copyright (C) 2020 Oliver Nightingale\n */\n\n/**\n * lunr.generateStopWordFilter builds a stopWordFilter function from the provided\n * list of stop words.\n *\n * The built in lunr.stopWordFilter is built using this generator and can be used\n * to generate custom stopWordFilters for applications or non English languages.\n *\n * @function\n * @param {Array} token The token to pass through the filter\n * @returns {lunr.PipelineFunction}\n * @see lunr.Pipeline\n * @see lunr.stopWordFilter\n */\nlunr.generateStopWordFilter = function (stopWords) {\n var words = stopWords.reduce(function (memo, stopWord) {\n memo[stopWord] = stopWord\n return memo\n }, {})\n\n return function (token) {\n if (token && words[token.toString()] !== token.toString()) return token\n }\n}\n\n/**\n * lunr.stopWordFilter is an English language stop word list filter, any words\n * contained in the list will not be passed through the filter.\n *\n * This is intended to be used in the Pipeline. If the token does not pass the\n * filter then undefined will be returned.\n *\n * @function\n * @implements {lunr.PipelineFunction}\n * @params {lunr.Token} token - A token to check for being a stop word.\n * @returns {lunr.Token}\n * @see {@link lunr.Pipeline}\n */\nlunr.stopWordFilter = lunr.generateStopWordFilter([\n 'a',\n 'able',\n 'about',\n 'across',\n 'after',\n 'all',\n 'almost',\n 'also',\n 'am',\n 'among',\n 'an',\n 'and',\n 'any',\n 'are',\n 'as',\n 'at',\n 'be',\n 'because',\n 'been',\n 'but',\n 'by',\n 'can',\n 'cannot',\n 'could',\n 'dear',\n 'did',\n 'do',\n 'does',\n 'either',\n 'else',\n 'ever',\n 'every',\n 'for',\n 'from',\n 'get',\n 'got',\n 'had',\n 'has',\n 'have',\n 'he',\n 'her',\n 'hers',\n 'him',\n 'his',\n 'how',\n 'however',\n 'i',\n 'if',\n 'in',\n 'into',\n 'is',\n 'it',\n 'its',\n 'just',\n 'least',\n 'let',\n 'like',\n 'likely',\n 'may',\n 'me',\n 'might',\n 'most',\n 'must',\n 'my',\n 'neither',\n 'no',\n 'nor',\n 'not',\n 'of',\n 'off',\n 'often',\n 'on',\n 'only',\n 'or',\n 'other',\n 'our',\n 'own',\n 'rather',\n 'said',\n 'say',\n 'says',\n 'she',\n 'should',\n 'since',\n 'so',\n 'some',\n 'than',\n 'that',\n 'the',\n 'their',\n 'them',\n 'then',\n 'there',\n 'these',\n 'they',\n 'this',\n 'tis',\n 'to',\n 'too',\n 'twas',\n 'us',\n 'wants',\n 'was',\n 'we',\n 'were',\n 'what',\n 'when',\n 'where',\n 'which',\n 'while',\n 'who',\n 'whom',\n 'why',\n 'will',\n 'with',\n 'would',\n 'yet',\n 'you',\n 'your'\n])\n\nlunr.Pipeline.registerFunction(lunr.stopWordFilter, 'stopWordFilter')\n/*!\n * lunr.trimmer\n * Copyright (C) 2020 Oliver Nightingale\n */\n\n/**\n * lunr.trimmer is a pipeline function for trimming non word\n * characters from the beginning and end of tokens before they\n * enter the index.\n *\n * This implementation may not work correctly for non latin\n * characters and should either be removed or adapted for use\n * with languages with non-latin characters.\n *\n * @static\n * @implements {lunr.PipelineFunction}\n * @param {lunr.Token} token The token to pass through the filter\n * @returns {lunr.Token}\n * @see lunr.Pipeline\n */\nlunr.trimmer = function (token) {\n return token.update(function (s) {\n return s.replace(/^\\W+/, '').replace(/\\W+$/, '')\n })\n}\n\nlunr.Pipeline.registerFunction(lunr.trimmer, 'trimmer')\n/*!\n * lunr.TokenSet\n * Copyright (C) 2020 Oliver Nightingale\n */\n\n/**\n * A token set is used to store the unique list of all tokens\n * within an index. Token sets are also used to represent an\n * incoming query to the index, this query token set and index\n * token set are then intersected to find which tokens to look\n * up in the inverted index.\n *\n * A token set can hold multiple tokens, as in the case of the\n * index token set, or it can hold a single token as in the\n * case of a simple query token set.\n *\n * Additionally token sets are used to perform wildcard matching.\n * Leading, contained and trailing wildcards are supported, and\n * from this edit distance matching can also be provided.\n *\n * Token sets are implemented as a minimal finite state automata,\n * where both common prefixes and suffixes are shared between tokens.\n * This helps to reduce the space used for storing the token set.\n *\n * @constructor\n */\nlunr.TokenSet = function () {\n this.final = false\n this.edges = {}\n this.id = lunr.TokenSet._nextId\n lunr.TokenSet._nextId += 1\n}\n\n/**\n * Keeps track of the next, auto increment, identifier to assign\n * to a new tokenSet.\n *\n * TokenSets require a unique identifier to be correctly minimised.\n *\n * @private\n */\nlunr.TokenSet._nextId = 1\n\n/**\n * Creates a TokenSet instance from the given sorted array of words.\n *\n * @param {String[]} arr - A sorted array of strings to create the set from.\n * @returns {lunr.TokenSet}\n * @throws Will throw an error if the input array is not sorted.\n */\nlunr.TokenSet.fromArray = function (arr) {\n var builder = new lunr.TokenSet.Builder\n\n for (var i = 0, len = arr.length; i < len; i++) {\n builder.insert(arr[i])\n }\n\n builder.finish()\n return builder.root\n}\n\n/**\n * Creates a token set from a query clause.\n *\n * @private\n * @param {Object} clause - A single clause from lunr.Query.\n * @param {string} clause.term - The query clause term.\n * @param {number} [clause.editDistance] - The optional edit distance for the term.\n * @returns {lunr.TokenSet}\n */\nlunr.TokenSet.fromClause = function (clause) {\n if ('editDistance' in clause) {\n return lunr.TokenSet.fromFuzzyString(clause.term, clause.editDistance)\n } else {\n return lunr.TokenSet.fromString(clause.term)\n }\n}\n\n/**\n * Creates a token set representing a single string with a specified\n * edit distance.\n *\n * Insertions, deletions, substitutions and transpositions are each\n * treated as an edit distance of 1.\n *\n * Increasing the allowed edit distance will have a dramatic impact\n * on the performance of both creating and intersecting these TokenSets.\n * It is advised to keep the edit distance less than 3.\n *\n * @param {string} str - The string to create the token set from.\n * @param {number} editDistance - The allowed edit distance to match.\n * @returns {lunr.Vector}\n */\nlunr.TokenSet.fromFuzzyString = function (str, editDistance) {\n var root = new lunr.TokenSet\n\n var stack = [{\n node: root,\n editsRemaining: editDistance,\n str: str\n }]\n\n while (stack.length) {\n var frame = stack.pop()\n\n // no edit\n if (frame.str.length > 0) {\n var char = frame.str.charAt(0),\n noEditNode\n\n if (char in frame.node.edges) {\n noEditNode = frame.node.edges[char]\n } else {\n noEditNode = new lunr.TokenSet\n frame.node.edges[char] = noEditNode\n }\n\n if (frame.str.length == 1) {\n noEditNode.final = true\n }\n\n stack.push({\n node: noEditNode,\n editsRemaining: frame.editsRemaining,\n str: frame.str.slice(1)\n })\n }\n\n if (frame.editsRemaining == 0) {\n continue\n }\n\n // insertion\n if (\"*\" in frame.node.edges) {\n var insertionNode = frame.node.edges[\"*\"]\n } else {\n var insertionNode = new lunr.TokenSet\n frame.node.edges[\"*\"] = insertionNode\n }\n\n if (frame.str.length == 0) {\n insertionNode.final = true\n }\n\n stack.push({\n node: insertionNode,\n editsRemaining: frame.editsRemaining - 1,\n str: frame.str\n })\n\n // deletion\n // can only do a deletion if we have enough edits remaining\n // and if there are characters left to delete in the string\n if (frame.str.length > 1) {\n stack.push({\n node: frame.node,\n editsRemaining: frame.editsRemaining - 1,\n str: frame.str.slice(1)\n })\n }\n\n // deletion\n // just removing the last character from the str\n if (frame.str.length == 1) {\n frame.node.final = true\n }\n\n // substitution\n // can only do a substitution if we have enough edits remaining\n // and if there are characters left to substitute\n if (frame.str.length >= 1) {\n if (\"*\" in frame.node.edges) {\n var substitutionNode = frame.node.edges[\"*\"]\n } else {\n var substitutionNode = new lunr.TokenSet\n frame.node.edges[\"*\"] = substitutionNode\n }\n\n if (frame.str.length == 1) {\n substitutionNode.final = true\n }\n\n stack.push({\n node: substitutionNode,\n editsRemaining: frame.editsRemaining - 1,\n str: frame.str.slice(1)\n })\n }\n\n // transposition\n // can only do a transposition if there are edits remaining\n // and there are enough characters to transpose\n if (frame.str.length > 1) {\n var charA = frame.str.charAt(0),\n charB = frame.str.charAt(1),\n transposeNode\n\n if (charB in frame.node.edges) {\n transposeNode = frame.node.edges[charB]\n } else {\n transposeNode = new lunr.TokenSet\n frame.node.edges[charB] = transposeNode\n }\n\n if (frame.str.length == 1) {\n transposeNode.final = true\n }\n\n stack.push({\n node: transposeNode,\n editsRemaining: frame.editsRemaining - 1,\n str: charA + frame.str.slice(2)\n })\n }\n }\n\n return root\n}\n\n/**\n * Creates a TokenSet from a string.\n *\n * The string may contain one or more wildcard characters (*)\n * that will allow wildcard matching when intersecting with\n * another TokenSet.\n *\n * @param {string} str - The string to create a TokenSet from.\n * @returns {lunr.TokenSet}\n */\nlunr.TokenSet.fromString = function (str) {\n var node = new lunr.TokenSet,\n root = node\n\n /*\n * Iterates through all characters within the passed string\n * appending a node for each character.\n *\n * When a wildcard character is found then a self\n * referencing edge is introduced to continually match\n * any number of any characters.\n */\n for (var i = 0, len = str.length; i < len; i++) {\n var char = str[i],\n final = (i == len - 1)\n\n if (char == \"*\") {\n node.edges[char] = node\n node.final = final\n\n } else {\n var next = new lunr.TokenSet\n next.final = final\n\n node.edges[char] = next\n node = next\n }\n }\n\n return root\n}\n\n/**\n * Converts this TokenSet into an array of strings\n * contained within the TokenSet.\n *\n * This is not intended to be used on a TokenSet that\n * contains wildcards, in these cases the results are\n * undefined and are likely to cause an infinite loop.\n *\n * @returns {string[]}\n */\nlunr.TokenSet.prototype.toArray = function () {\n var words = []\n\n var stack = [{\n prefix: \"\",\n node: this\n }]\n\n while (stack.length) {\n var frame = stack.pop(),\n edges = Object.keys(frame.node.edges),\n len = edges.length\n\n if (frame.node.final) {\n /* In Safari, at this point the prefix is sometimes corrupted, see:\n * https://github.com/olivernn/lunr.js/issues/279 Calling any\n * String.prototype method forces Safari to \"cast\" this string to what\n * it's supposed to be, fixing the bug. */\n frame.prefix.charAt(0)\n words.push(frame.prefix)\n }\n\n for (var i = 0; i < len; i++) {\n var edge = edges[i]\n\n stack.push({\n prefix: frame.prefix.concat(edge),\n node: frame.node.edges[edge]\n })\n }\n }\n\n return words\n}\n\n/**\n * Generates a string representation of a TokenSet.\n *\n * This is intended to allow TokenSets to be used as keys\n * in objects, largely to aid the construction and minimisation\n * of a TokenSet. As such it is not designed to be a human\n * friendly representation of the TokenSet.\n *\n * @returns {string}\n */\nlunr.TokenSet.prototype.toString = function () {\n // NOTE: Using Object.keys here as this.edges is very likely\n // to enter 'hash-mode' with many keys being added\n //\n // avoiding a for-in loop here as it leads to the function\n // being de-optimised (at least in V8). From some simple\n // benchmarks the performance is comparable, but allowing\n // V8 to optimize may mean easy performance wins in the future.\n\n if (this._str) {\n return this._str\n }\n\n var str = this.final ? '1' : '0',\n labels = Object.keys(this.edges).sort(),\n len = labels.length\n\n for (var i = 0; i < len; i++) {\n var label = labels[i],\n node = this.edges[label]\n\n str = str + label + node.id\n }\n\n return str\n}\n\n/**\n * Returns a new TokenSet that is the intersection of\n * this TokenSet and the passed TokenSet.\n *\n * This intersection will take into account any wildcards\n * contained within the TokenSet.\n *\n * @param {lunr.TokenSet} b - An other TokenSet to intersect with.\n * @returns {lunr.TokenSet}\n */\nlunr.TokenSet.prototype.intersect = function (b) {\n var output = new lunr.TokenSet,\n frame = undefined\n\n var stack = [{\n qNode: b,\n output: output,\n node: this\n }]\n\n while (stack.length) {\n frame = stack.pop()\n\n // NOTE: As with the #toString method, we are using\n // Object.keys and a for loop instead of a for-in loop\n // as both of these objects enter 'hash' mode, causing\n // the function to be de-optimised in V8\n var qEdges = Object.keys(frame.qNode.edges),\n qLen = qEdges.length,\n nEdges = Object.keys(frame.node.edges),\n nLen = nEdges.length\n\n for (var q = 0; q < qLen; q++) {\n var qEdge = qEdges[q]\n\n for (var n = 0; n < nLen; n++) {\n var nEdge = nEdges[n]\n\n if (nEdge == qEdge || qEdge == '*') {\n var node = frame.node.edges[nEdge],\n qNode = frame.qNode.edges[qEdge],\n final = node.final && qNode.final,\n next = undefined\n\n if (nEdge in frame.output.edges) {\n // an edge already exists for this character\n // no need to create a new node, just set the finality\n // bit unless this node is already final\n next = frame.output.edges[nEdge]\n next.final = next.final || final\n\n } else {\n // no edge exists yet, must create one\n // set the finality bit and insert it\n // into the output\n next = new lunr.TokenSet\n next.final = final\n frame.output.edges[nEdge] = next\n }\n\n stack.push({\n qNode: qNode,\n output: next,\n node: node\n })\n }\n }\n }\n }\n\n return output\n}\nlunr.TokenSet.Builder = function () {\n this.previousWord = \"\"\n this.root = new lunr.TokenSet\n this.uncheckedNodes = []\n this.minimizedNodes = {}\n}\n\nlunr.TokenSet.Builder.prototype.insert = function (word) {\n var node,\n commonPrefix = 0\n\n if (word < this.previousWord) {\n throw new Error (\"Out of order word insertion\")\n }\n\n for (var i = 0; i < word.length && i < this.previousWord.length; i++) {\n if (word[i] != this.previousWord[i]) break\n commonPrefix++\n }\n\n this.minimize(commonPrefix)\n\n if (this.uncheckedNodes.length == 0) {\n node = this.root\n } else {\n node = this.uncheckedNodes[this.uncheckedNodes.length - 1].child\n }\n\n for (var i = commonPrefix; i < word.length; i++) {\n var nextNode = new lunr.TokenSet,\n char = word[i]\n\n node.edges[char] = nextNode\n\n this.uncheckedNodes.push({\n parent: node,\n char: char,\n child: nextNode\n })\n\n node = nextNode\n }\n\n node.final = true\n this.previousWord = word\n}\n\nlunr.TokenSet.Builder.prototype.finish = function () {\n this.minimize(0)\n}\n\nlunr.TokenSet.Builder.prototype.minimize = function (downTo) {\n for (var i = this.uncheckedNodes.length - 1; i >= downTo; i--) {\n var node = this.uncheckedNodes[i],\n childKey = node.child.toString()\n\n if (childKey in this.minimizedNodes) {\n node.parent.edges[node.char] = this.minimizedNodes[childKey]\n } else {\n // Cache the key for this node since\n // we know it can't change anymore\n node.child._str = childKey\n\n this.minimizedNodes[childKey] = node.child\n }\n\n this.uncheckedNodes.pop()\n }\n}\n/*!\n * lunr.Index\n * Copyright (C) 2020 Oliver Nightingale\n */\n\n/**\n * An index contains the built index of all documents and provides a query interface\n * to the index.\n *\n * Usually instances of lunr.Index will not be created using this constructor, instead\n * lunr.Builder should be used to construct new indexes, or lunr.Index.load should be\n * used to load previously built and serialized indexes.\n *\n * @constructor\n * @param {Object} attrs - The attributes of the built search index.\n * @param {Object} attrs.invertedIndex - An index of term/field to document reference.\n * @param {Object} attrs.fieldVectors - Field vectors\n * @param {lunr.TokenSet} attrs.tokenSet - An set of all corpus tokens.\n * @param {string[]} attrs.fields - The names of indexed document fields.\n * @param {lunr.Pipeline} attrs.pipeline - The pipeline to use for search terms.\n */\nlunr.Index = function (attrs) {\n this.invertedIndex = attrs.invertedIndex\n this.fieldVectors = attrs.fieldVectors\n this.tokenSet = attrs.tokenSet\n this.fields = attrs.fields\n this.pipeline = attrs.pipeline\n}\n\n/**\n * A result contains details of a document matching a search query.\n * @typedef {Object} lunr.Index~Result\n * @property {string} ref - The reference of the document this result represents.\n * @property {number} score - A number between 0 and 1 representing how similar this document is to the query.\n * @property {lunr.MatchData} matchData - Contains metadata about this match including which term(s) caused the match.\n */\n\n/**\n * Although lunr provides the ability to create queries using lunr.Query, it also provides a simple\n * query language which itself is parsed into an instance of lunr.Query.\n *\n * For programmatically building queries it is advised to directly use lunr.Query, the query language\n * is best used for human entered text rather than program generated text.\n *\n * At its simplest queries can just be a single term, e.g. `hello`, multiple terms are also supported\n * and will be combined with OR, e.g `hello world` will match documents that contain either 'hello'\n * or 'world', though those that contain both will rank higher in the results.\n *\n * Wildcards can be included in terms to match one or more unspecified characters, these wildcards can\n * be inserted anywhere within the term, and more than one wildcard can exist in a single term. Adding\n * wildcards will increase the number of documents that will be found but can also have a negative\n * impact on query performance, especially with wildcards at the beginning of a term.\n *\n * Terms can be restricted to specific fields, e.g. `title:hello`, only documents with the term\n * hello in the title field will match this query. Using a field not present in the index will lead\n * to an error being thrown.\n *\n * Modifiers can also be added to terms, lunr supports edit distance and boost modifiers on terms. A term\n * boost will make documents matching that term score higher, e.g. `foo^5`. Edit distance is also supported\n * to provide fuzzy matching, e.g. 'hello~2' will match documents with hello with an edit distance of 2.\n * Avoid large values for edit distance to improve query performance.\n *\n * Each term also supports a presence modifier. By default a term's presence in document is optional, however\n * this can be changed to either required or prohibited. For a term's presence to be required in a document the\n * term should be prefixed with a '+', e.g. `+foo bar` is a search for documents that must contain 'foo' and\n * optionally contain 'bar'. Conversely a leading '-' sets the terms presence to prohibited, i.e. it must not\n * appear in a document, e.g. `-foo bar` is a search for documents that do not contain 'foo' but may contain 'bar'.\n *\n * To escape special characters the backslash character '\\' can be used, this allows searches to include\n * characters that would normally be considered modifiers, e.g. `foo\\~2` will search for a term \"foo~2\" instead\n * of attempting to apply a boost of 2 to the search term \"foo\".\n *\n * @typedef {string} lunr.Index~QueryString\n * @example Simple single term query\n * hello\n * @example Multiple term query\n * hello world\n * @example term scoped to a field\n * title:hello\n * @example term with a boost of 10\n * hello^10\n * @example term with an edit distance of 2\n * hello~2\n * @example terms with presence modifiers\n * -foo +bar baz\n */\n\n/**\n * Performs a search against the index using lunr query syntax.\n *\n * Results will be returned sorted by their score, the most relevant results\n * will be returned first. For details on how the score is calculated, please see\n * the {@link https://lunrjs.com/guides/searching.html#scoring|guide}.\n *\n * For more programmatic querying use lunr.Index#query.\n *\n * @param {lunr.Index~QueryString} queryString - A string containing a lunr query.\n * @throws {lunr.QueryParseError} If the passed query string cannot be parsed.\n * @returns {lunr.Index~Result[]}\n */\nlunr.Index.prototype.search = function (queryString) {\n return this.query(function (query) {\n var parser = new lunr.QueryParser(queryString, query)\n parser.parse()\n })\n}\n\n/**\n * A query builder callback provides a query object to be used to express\n * the query to perform on the index.\n *\n * @callback lunr.Index~queryBuilder\n * @param {lunr.Query} query - The query object to build up.\n * @this lunr.Query\n */\n\n/**\n * Performs a query against the index using the yielded lunr.Query object.\n *\n * If performing programmatic queries against the index, this method is preferred\n * over lunr.Index#search so as to avoid the additional query parsing overhead.\n *\n * A query object is yielded to the supplied function which should be used to\n * express the query to be run against the index.\n *\n * Note that although this function takes a callback parameter it is _not_ an\n * asynchronous operation, the callback is just yielded a query object to be\n * customized.\n *\n * @param {lunr.Index~queryBuilder} fn - A function that is used to build the query.\n * @returns {lunr.Index~Result[]}\n */\nlunr.Index.prototype.query = function (fn) {\n // for each query clause\n // * process terms\n // * expand terms from token set\n // * find matching documents and metadata\n // * get document vectors\n // * score documents\n\n var query = new lunr.Query(this.fields),\n matchingFields = Object.create(null),\n queryVectors = Object.create(null),\n termFieldCache = Object.create(null),\n requiredMatches = Object.create(null),\n prohibitedMatches = Object.create(null)\n\n /*\n * To support field level boosts a query vector is created per\n * field. An empty vector is eagerly created to support negated\n * queries.\n */\n for (var i = 0; i < this.fields.length; i++) {\n queryVectors[this.fields[i]] = new lunr.Vector\n }\n\n fn.call(query, query)\n\n for (var i = 0; i < query.clauses.length; i++) {\n /*\n * Unless the pipeline has been disabled for this term, which is\n * the case for terms with wildcards, we need to pass the clause\n * term through the search pipeline. A pipeline returns an array\n * of processed terms. Pipeline functions may expand the passed\n * term, which means we may end up performing multiple index lookups\n * for a single query term.\n */\n var clause = query.clauses[i],\n terms = null,\n clauseMatches = lunr.Set.empty\n\n if (clause.usePipeline) {\n terms = this.pipeline.runString(clause.term, {\n fields: clause.fields\n })\n } else {\n terms = [clause.term]\n }\n\n for (var m = 0; m < terms.length; m++) {\n var term = terms[m]\n\n /*\n * Each term returned from the pipeline needs to use the same query\n * clause object, e.g. the same boost and or edit distance. The\n * simplest way to do this is to re-use the clause object but mutate\n * its term property.\n */\n clause.term = term\n\n /*\n * From the term in the clause we create a token set which will then\n * be used to intersect the indexes token set to get a list of terms\n * to lookup in the inverted index\n */\n var termTokenSet = lunr.TokenSet.fromClause(clause),\n expandedTerms = this.tokenSet.intersect(termTokenSet).toArray()\n\n /*\n * If a term marked as required does not exist in the tokenSet it is\n * impossible for the search to return any matches. We set all the field\n * scoped required matches set to empty and stop examining any further\n * clauses.\n */\n if (expandedTerms.length === 0 && clause.presence === lunr.Query.presence.REQUIRED) {\n for (var k = 0; k < clause.fields.length; k++) {\n var field = clause.fields[k]\n requiredMatches[field] = lunr.Set.empty\n }\n\n break\n }\n\n for (var j = 0; j < expandedTerms.length; j++) {\n /*\n * For each term get the posting and termIndex, this is required for\n * building the query vector.\n */\n var expandedTerm = expandedTerms[j],\n posting = this.invertedIndex[expandedTerm],\n termIndex = posting._index\n\n for (var k = 0; k < clause.fields.length; k++) {\n /*\n * For each field that this query term is scoped by (by default\n * all fields are in scope) we need to get all the document refs\n * that have this term in that field.\n *\n * The posting is the entry in the invertedIndex for the matching\n * term from above.\n */\n var field = clause.fields[k],\n fieldPosting = posting[field],\n matchingDocumentRefs = Object.keys(fieldPosting),\n termField = expandedTerm + \"/\" + field,\n matchingDocumentsSet = new lunr.Set(matchingDocumentRefs)\n\n /*\n * if the presence of this term is required ensure that the matching\n * documents are added to the set of required matches for this clause.\n *\n */\n if (clause.presence == lunr.Query.presence.REQUIRED) {\n clauseMatches = clauseMatches.union(matchingDocumentsSet)\n\n if (requiredMatches[field] === undefined) {\n requiredMatches[field] = lunr.Set.complete\n }\n }\n\n /*\n * if the presence of this term is prohibited ensure that the matching\n * documents are added to the set of prohibited matches for this field,\n * creating that set if it does not yet exist.\n */\n if (clause.presence == lunr.Query.presence.PROHIBITED) {\n if (prohibitedMatches[field] === undefined) {\n prohibitedMatches[field] = lunr.Set.empty\n }\n\n prohibitedMatches[field] = prohibitedMatches[field].union(matchingDocumentsSet)\n\n /*\n * Prohibited matches should not be part of the query vector used for\n * similarity scoring and no metadata should be extracted so we continue\n * to the next field\n */\n continue\n }\n\n /*\n * The query field vector is populated using the termIndex found for\n * the term and a unit value with the appropriate boost applied.\n * Using upsert because there could already be an entry in the vector\n * for the term we are working with. In that case we just add the scores\n * together.\n */\n queryVectors[field].upsert(termIndex, clause.boost, function (a, b) { return a + b })\n\n /**\n * If we've already seen this term, field combo then we've already collected\n * the matching documents and metadata, no need to go through all that again\n */\n if (termFieldCache[termField]) {\n continue\n }\n\n for (var l = 0; l < matchingDocumentRefs.length; l++) {\n /*\n * All metadata for this term/field/document triple\n * are then extracted and collected into an instance\n * of lunr.MatchData ready to be returned in the query\n * results\n */\n var matchingDocumentRef = matchingDocumentRefs[l],\n matchingFieldRef = new lunr.FieldRef (matchingDocumentRef, field),\n metadata = fieldPosting[matchingDocumentRef],\n fieldMatch\n\n if ((fieldMatch = matchingFields[matchingFieldRef]) === undefined) {\n matchingFields[matchingFieldRef] = new lunr.MatchData (expandedTerm, field, metadata)\n } else {\n fieldMatch.add(expandedTerm, field, metadata)\n }\n\n }\n\n termFieldCache[termField] = true\n }\n }\n }\n\n /**\n * If the presence was required we need to update the requiredMatches field sets.\n * We do this after all fields for the term have collected their matches because\n * the clause terms presence is required in _any_ of the fields not _all_ of the\n * fields.\n */\n if (clause.presence === lunr.Query.presence.REQUIRED) {\n for (var k = 0; k < clause.fields.length; k++) {\n var field = clause.fields[k]\n requiredMatches[field] = requiredMatches[field].intersect(clauseMatches)\n }\n }\n }\n\n /**\n * Need to combine the field scoped required and prohibited\n * matching documents into a global set of required and prohibited\n * matches\n */\n var allRequiredMatches = lunr.Set.complete,\n allProhibitedMatches = lunr.Set.empty\n\n for (var i = 0; i < this.fields.length; i++) {\n var field = this.fields[i]\n\n if (requiredMatches[field]) {\n allRequiredMatches = allRequiredMatches.intersect(requiredMatches[field])\n }\n\n if (prohibitedMatches[field]) {\n allProhibitedMatches = allProhibitedMatches.union(prohibitedMatches[field])\n }\n }\n\n var matchingFieldRefs = Object.keys(matchingFields),\n results = [],\n matches = Object.create(null)\n\n /*\n * If the query is negated (contains only prohibited terms)\n * we need to get _all_ fieldRefs currently existing in the\n * index. This is only done when we know that the query is\n * entirely prohibited terms to avoid any cost of getting all\n * fieldRefs unnecessarily.\n *\n * Additionally, blank MatchData must be created to correctly\n * populate the results.\n */\n if (query.isNegated()) {\n matchingFieldRefs = Object.keys(this.fieldVectors)\n\n for (var i = 0; i < matchingFieldRefs.length; i++) {\n var matchingFieldRef = matchingFieldRefs[i]\n var fieldRef = lunr.FieldRef.fromString(matchingFieldRef)\n matchingFields[matchingFieldRef] = new lunr.MatchData\n }\n }\n\n for (var i = 0; i < matchingFieldRefs.length; i++) {\n /*\n * Currently we have document fields that match the query, but we\n * need to return documents. The matchData and scores are combined\n * from multiple fields belonging to the same document.\n *\n * Scores are calculated by field, using the query vectors created\n * above, and combined into a final document score using addition.\n */\n var fieldRef = lunr.FieldRef.fromString(matchingFieldRefs[i]),\n docRef = fieldRef.docRef\n\n if (!allRequiredMatches.contains(docRef)) {\n continue\n }\n\n if (allProhibitedMatches.contains(docRef)) {\n continue\n }\n\n var fieldVector = this.fieldVectors[fieldRef],\n score = queryVectors[fieldRef.fieldName].similarity(fieldVector),\n docMatch\n\n if ((docMatch = matches[docRef]) !== undefined) {\n docMatch.score += score\n docMatch.matchData.combine(matchingFields[fieldRef])\n } else {\n var match = {\n ref: docRef,\n score: score,\n matchData: matchingFields[fieldRef]\n }\n matches[docRef] = match\n results.push(match)\n }\n }\n\n /*\n * Sort the results objects by score, highest first.\n */\n return results.sort(function (a, b) {\n return b.score - a.score\n })\n}\n\n/**\n * Prepares the index for JSON serialization.\n *\n * The schema for this JSON blob will be described in a\n * separate JSON schema file.\n *\n * @returns {Object}\n */\nlunr.Index.prototype.toJSON = function () {\n var invertedIndex = Object.keys(this.invertedIndex)\n .sort()\n .map(function (term) {\n return [term, this.invertedIndex[term]]\n }, this)\n\n var fieldVectors = Object.keys(this.fieldVectors)\n .map(function (ref) {\n return [ref, this.fieldVectors[ref].toJSON()]\n }, this)\n\n return {\n version: lunr.version,\n fields: this.fields,\n fieldVectors: fieldVectors,\n invertedIndex: invertedIndex,\n pipeline: this.pipeline.toJSON()\n }\n}\n\n/**\n * Loads a previously serialized lunr.Index\n *\n * @param {Object} serializedIndex - A previously serialized lunr.Index\n * @returns {lunr.Index}\n */\nlunr.Index.load = function (serializedIndex) {\n var attrs = {},\n fieldVectors = {},\n serializedVectors = serializedIndex.fieldVectors,\n invertedIndex = Object.create(null),\n serializedInvertedIndex = serializedIndex.invertedIndex,\n tokenSetBuilder = new lunr.TokenSet.Builder,\n pipeline = lunr.Pipeline.load(serializedIndex.pipeline)\n\n if (serializedIndex.version != lunr.version) {\n lunr.utils.warn(\"Version mismatch when loading serialised index. Current version of lunr '\" + lunr.version + \"' does not match serialized index '\" + serializedIndex.version + \"'\")\n }\n\n for (var i = 0; i < serializedVectors.length; i++) {\n var tuple = serializedVectors[i],\n ref = tuple[0],\n elements = tuple[1]\n\n fieldVectors[ref] = new lunr.Vector(elements)\n }\n\n for (var i = 0; i < serializedInvertedIndex.length; i++) {\n var tuple = serializedInvertedIndex[i],\n term = tuple[0],\n posting = tuple[1]\n\n tokenSetBuilder.insert(term)\n invertedIndex[term] = posting\n }\n\n tokenSetBuilder.finish()\n\n attrs.fields = serializedIndex.fields\n\n attrs.fieldVectors = fieldVectors\n attrs.invertedIndex = invertedIndex\n attrs.tokenSet = tokenSetBuilder.root\n attrs.pipeline = pipeline\n\n return new lunr.Index(attrs)\n}\n/*!\n * lunr.Builder\n * Copyright (C) 2020 Oliver Nightingale\n */\n\n/**\n * lunr.Builder performs indexing on a set of documents and\n * returns instances of lunr.Index ready for querying.\n *\n * All configuration of the index is done via the builder, the\n * fields to index, the document reference, the text processing\n * pipeline and document scoring parameters are all set on the\n * builder before indexing.\n *\n * @constructor\n * @property {string} _ref - Internal reference to the document reference field.\n * @property {string[]} _fields - Internal reference to the document fields to index.\n * @property {object} invertedIndex - The inverted index maps terms to document fields.\n * @property {object} documentTermFrequencies - Keeps track of document term frequencies.\n * @property {object} documentLengths - Keeps track of the length of documents added to the index.\n * @property {lunr.tokenizer} tokenizer - Function for splitting strings into tokens for indexing.\n * @property {lunr.Pipeline} pipeline - The pipeline performs text processing on tokens before indexing.\n * @property {lunr.Pipeline} searchPipeline - A pipeline for processing search terms before querying the index.\n * @property {number} documentCount - Keeps track of the total number of documents indexed.\n * @property {number} _b - A parameter to control field length normalization, setting this to 0 disabled normalization, 1 fully normalizes field lengths, the default value is 0.75.\n * @property {number} _k1 - A parameter to control how quickly an increase in term frequency results in term frequency saturation, the default value is 1.2.\n * @property {number} termIndex - A counter incremented for each unique term, used to identify a terms position in the vector space.\n * @property {array} metadataWhitelist - A list of metadata keys that have been whitelisted for entry in the index.\n */\nlunr.Builder = function () {\n this._ref = \"id\"\n this._fields = Object.create(null)\n this._documents = Object.create(null)\n this.invertedIndex = Object.create(null)\n this.fieldTermFrequencies = {}\n this.fieldLengths = {}\n this.tokenizer = lunr.tokenizer\n this.pipeline = new lunr.Pipeline\n this.searchPipeline = new lunr.Pipeline\n this.documentCount = 0\n this._b = 0.75\n this._k1 = 1.2\n this.termIndex = 0\n this.metadataWhitelist = []\n}\n\n/**\n * Sets the document field used as the document reference. Every document must have this field.\n * The type of this field in the document should be a string, if it is not a string it will be\n * coerced into a string by calling toString.\n *\n * The default ref is 'id'.\n *\n * The ref should _not_ be changed during indexing, it should be set before any documents are\n * added to the index. Changing it during indexing can lead to inconsistent results.\n *\n * @param {string} ref - The name of the reference field in the document.\n */\nlunr.Builder.prototype.ref = function (ref) {\n this._ref = ref\n}\n\n/**\n * A function that is used to extract a field from a document.\n *\n * Lunr expects a field to be at the top level of a document, if however the field\n * is deeply nested within a document an extractor function can be used to extract\n * the right field for indexing.\n *\n * @callback fieldExtractor\n * @param {object} doc - The document being added to the index.\n * @returns {?(string|object|object[])} obj - The object that will be indexed for this field.\n * @example Extracting a nested field\n * function (doc) { return doc.nested.field }\n */\n\n/**\n * Adds a field to the list of document fields that will be indexed. Every document being\n * indexed should have this field. Null values for this field in indexed documents will\n * not cause errors but will limit the chance of that document being retrieved by searches.\n *\n * All fields should be added before adding documents to the index. Adding fields after\n * a document has been indexed will have no effect on already indexed documents.\n *\n * Fields can be boosted at build time. This allows terms within that field to have more\n * importance when ranking search results. Use a field boost to specify that matches within\n * one field are more important than other fields.\n *\n * @param {string} fieldName - The name of a field to index in all documents.\n * @param {object} attributes - Optional attributes associated with this field.\n * @param {number} [attributes.boost=1] - Boost applied to all terms within this field.\n * @param {fieldExtractor} [attributes.extractor] - Function to extract a field from a document.\n * @throws {RangeError} fieldName cannot contain unsupported characters '/'\n */\nlunr.Builder.prototype.field = function (fieldName, attributes) {\n if (/\\//.test(fieldName)) {\n throw new RangeError (\"Field '\" + fieldName + \"' contains illegal character '/'\")\n }\n\n this._fields[fieldName] = attributes || {}\n}\n\n/**\n * A parameter to tune the amount of field length normalisation that is applied when\n * calculating relevance scores. A value of 0 will completely disable any normalisation\n * and a value of 1 will fully normalise field lengths. The default is 0.75. Values of b\n * will be clamped to the range 0 - 1.\n *\n * @param {number} number - The value to set for this tuning parameter.\n */\nlunr.Builder.prototype.b = function (number) {\n if (number < 0) {\n this._b = 0\n } else if (number > 1) {\n this._b = 1\n } else {\n this._b = number\n }\n}\n\n/**\n * A parameter that controls the speed at which a rise in term frequency results in term\n * frequency saturation. The default value is 1.2. Setting this to a higher value will give\n * slower saturation levels, a lower value will result in quicker saturation.\n *\n * @param {number} number - The value to set for this tuning parameter.\n */\nlunr.Builder.prototype.k1 = function (number) {\n this._k1 = number\n}\n\n/**\n * Adds a document to the index.\n *\n * Before adding fields to the index the index should have been fully setup, with the document\n * ref and all fields to index already having been specified.\n *\n * The document must have a field name as specified by the ref (by default this is 'id') and\n * it should have all fields defined for indexing, though null or undefined values will not\n * cause errors.\n *\n * Entire documents can be boosted at build time. Applying a boost to a document indicates that\n * this document should rank higher in search results than other documents.\n *\n * @param {object} doc - The document to add to the index.\n * @param {object} attributes - Optional attributes associated with this document.\n * @param {number} [attributes.boost=1] - Boost applied to all terms within this document.\n */\nlunr.Builder.prototype.add = function (doc, attributes) {\n var docRef = doc[this._ref],\n fields = Object.keys(this._fields)\n\n this._documents[docRef] = attributes || {}\n this.documentCount += 1\n\n for (var i = 0; i < fields.length; i++) {\n var fieldName = fields[i],\n extractor = this._fields[fieldName].extractor,\n field = extractor ? extractor(doc) : doc[fieldName],\n tokens = this.tokenizer(field, {\n fields: [fieldName]\n }),\n terms = this.pipeline.run(tokens),\n fieldRef = new lunr.FieldRef (docRef, fieldName),\n fieldTerms = Object.create(null)\n\n this.fieldTermFrequencies[fieldRef] = fieldTerms\n this.fieldLengths[fieldRef] = 0\n\n // store the length of this field for this document\n this.fieldLengths[fieldRef] += terms.length\n\n // calculate term frequencies for this field\n for (var j = 0; j < terms.length; j++) {\n var term = terms[j]\n\n if (fieldTerms[term] == undefined) {\n fieldTerms[term] = 0\n }\n\n fieldTerms[term] += 1\n\n // add to inverted index\n // create an initial posting if one doesn't exist\n if (this.invertedIndex[term] == undefined) {\n var posting = Object.create(null)\n posting[\"_index\"] = this.termIndex\n this.termIndex += 1\n\n for (var k = 0; k < fields.length; k++) {\n posting[fields[k]] = Object.create(null)\n }\n\n this.invertedIndex[term] = posting\n }\n\n // add an entry for this term/fieldName/docRef to the invertedIndex\n if (this.invertedIndex[term][fieldName][docRef] == undefined) {\n this.invertedIndex[term][fieldName][docRef] = Object.create(null)\n }\n\n // store all whitelisted metadata about this token in the\n // inverted index\n for (var l = 0; l < this.metadataWhitelist.length; l++) {\n var metadataKey = this.metadataWhitelist[l],\n metadata = term.metadata[metadataKey]\n\n if (this.invertedIndex[term][fieldName][docRef][metadataKey] == undefined) {\n this.invertedIndex[term][fieldName][docRef][metadataKey] = []\n }\n\n this.invertedIndex[term][fieldName][docRef][metadataKey].push(metadata)\n }\n }\n\n }\n}\n\n/**\n * Calculates the average document length for this index\n *\n * @private\n */\nlunr.Builder.prototype.calculateAverageFieldLengths = function () {\n\n var fieldRefs = Object.keys(this.fieldLengths),\n numberOfFields = fieldRefs.length,\n accumulator = {},\n documentsWithField = {}\n\n for (var i = 0; i < numberOfFields; i++) {\n var fieldRef = lunr.FieldRef.fromString(fieldRefs[i]),\n field = fieldRef.fieldName\n\n documentsWithField[field] || (documentsWithField[field] = 0)\n documentsWithField[field] += 1\n\n accumulator[field] || (accumulator[field] = 0)\n accumulator[field] += this.fieldLengths[fieldRef]\n }\n\n var fields = Object.keys(this._fields)\n\n for (var i = 0; i < fields.length; i++) {\n var fieldName = fields[i]\n accumulator[fieldName] = accumulator[fieldName] / documentsWithField[fieldName]\n }\n\n this.averageFieldLength = accumulator\n}\n\n/**\n * Builds a vector space model of every document using lunr.Vector\n *\n * @private\n */\nlunr.Builder.prototype.createFieldVectors = function () {\n var fieldVectors = {},\n fieldRefs = Object.keys(this.fieldTermFrequencies),\n fieldRefsLength = fieldRefs.length,\n termIdfCache = Object.create(null)\n\n for (var i = 0; i < fieldRefsLength; i++) {\n var fieldRef = lunr.FieldRef.fromString(fieldRefs[i]),\n fieldName = fieldRef.fieldName,\n fieldLength = this.fieldLengths[fieldRef],\n fieldVector = new lunr.Vector,\n termFrequencies = this.fieldTermFrequencies[fieldRef],\n terms = Object.keys(termFrequencies),\n termsLength = terms.length\n\n\n var fieldBoost = this._fields[fieldName].boost || 1,\n docBoost = this._documents[fieldRef.docRef].boost || 1\n\n for (var j = 0; j < termsLength; j++) {\n var term = terms[j],\n tf = termFrequencies[term],\n termIndex = this.invertedIndex[term]._index,\n idf, score, scoreWithPrecision\n\n if (termIdfCache[term] === undefined) {\n idf = lunr.idf(this.invertedIndex[term], this.documentCount)\n termIdfCache[term] = idf\n } else {\n idf = termIdfCache[term]\n }\n\n score = idf * ((this._k1 + 1) * tf) / (this._k1 * (1 - this._b + this._b * (fieldLength / this.averageFieldLength[fieldName])) + tf)\n score *= fieldBoost\n score *= docBoost\n scoreWithPrecision = Math.round(score * 1000) / 1000\n // Converts 1.23456789 to 1.234.\n // Reducing the precision so that the vectors take up less\n // space when serialised. Doing it now so that they behave\n // the same before and after serialisation. Also, this is\n // the fastest approach to reducing a number's precision in\n // JavaScript.\n\n fieldVector.insert(termIndex, scoreWithPrecision)\n }\n\n fieldVectors[fieldRef] = fieldVector\n }\n\n this.fieldVectors = fieldVectors\n}\n\n/**\n * Creates a token set of all tokens in the index using lunr.TokenSet\n *\n * @private\n */\nlunr.Builder.prototype.createTokenSet = function () {\n this.tokenSet = lunr.TokenSet.fromArray(\n Object.keys(this.invertedIndex).sort()\n )\n}\n\n/**\n * Builds the index, creating an instance of lunr.Index.\n *\n * This completes the indexing process and should only be called\n * once all documents have been added to the index.\n *\n * @returns {lunr.Index}\n */\nlunr.Builder.prototype.build = function () {\n this.calculateAverageFieldLengths()\n this.createFieldVectors()\n this.createTokenSet()\n\n return new lunr.Index({\n invertedIndex: this.invertedIndex,\n fieldVectors: this.fieldVectors,\n tokenSet: this.tokenSet,\n fields: Object.keys(this._fields),\n pipeline: this.searchPipeline\n })\n}\n\n/**\n * Applies a plugin to the index builder.\n *\n * A plugin is a function that is called with the index builder as its context.\n * Plugins can be used to customise or extend the behaviour of the index\n * in some way. A plugin is just a function, that encapsulated the custom\n * behaviour that should be applied when building the index.\n *\n * The plugin function will be called with the index builder as its argument, additional\n * arguments can also be passed when calling use. The function will be called\n * with the index builder as its context.\n *\n * @param {Function} plugin The plugin to apply.\n */\nlunr.Builder.prototype.use = function (fn) {\n var args = Array.prototype.slice.call(arguments, 1)\n args.unshift(this)\n fn.apply(this, args)\n}\n/**\n * Contains and collects metadata about a matching document.\n * A single instance of lunr.MatchData is returned as part of every\n * lunr.Index~Result.\n *\n * @constructor\n * @param {string} term - The term this match data is associated with\n * @param {string} field - The field in which the term was found\n * @param {object} metadata - The metadata recorded about this term in this field\n * @property {object} metadata - A cloned collection of metadata associated with this document.\n * @see {@link lunr.Index~Result}\n */\nlunr.MatchData = function (term, field, metadata) {\n var clonedMetadata = Object.create(null),\n metadataKeys = Object.keys(metadata || {})\n\n // Cloning the metadata to prevent the original\n // being mutated during match data combination.\n // Metadata is kept in an array within the inverted\n // index so cloning the data can be done with\n // Array#slice\n for (var i = 0; i < metadataKeys.length; i++) {\n var key = metadataKeys[i]\n clonedMetadata[key] = metadata[key].slice()\n }\n\n this.metadata = Object.create(null)\n\n if (term !== undefined) {\n this.metadata[term] = Object.create(null)\n this.metadata[term][field] = clonedMetadata\n }\n}\n\n/**\n * An instance of lunr.MatchData will be created for every term that matches a\n * document. However only one instance is required in a lunr.Index~Result. This\n * method combines metadata from another instance of lunr.MatchData with this\n * objects metadata.\n *\n * @param {lunr.MatchData} otherMatchData - Another instance of match data to merge with this one.\n * @see {@link lunr.Index~Result}\n */\nlunr.MatchData.prototype.combine = function (otherMatchData) {\n var terms = Object.keys(otherMatchData.metadata)\n\n for (var i = 0; i < terms.length; i++) {\n var term = terms[i],\n fields = Object.keys(otherMatchData.metadata[term])\n\n if (this.metadata[term] == undefined) {\n this.metadata[term] = Object.create(null)\n }\n\n for (var j = 0; j < fields.length; j++) {\n var field = fields[j],\n keys = Object.keys(otherMatchData.metadata[term][field])\n\n if (this.metadata[term][field] == undefined) {\n this.metadata[term][field] = Object.create(null)\n }\n\n for (var k = 0; k < keys.length; k++) {\n var key = keys[k]\n\n if (this.metadata[term][field][key] == undefined) {\n this.metadata[term][field][key] = otherMatchData.metadata[term][field][key]\n } else {\n this.metadata[term][field][key] = this.metadata[term][field][key].concat(otherMatchData.metadata[term][field][key])\n }\n\n }\n }\n }\n}\n\n/**\n * Add metadata for a term/field pair to this instance of match data.\n *\n * @param {string} term - The term this match data is associated with\n * @param {string} field - The field in which the term was found\n * @param {object} metadata - The metadata recorded about this term in this field\n */\nlunr.MatchData.prototype.add = function (term, field, metadata) {\n if (!(term in this.metadata)) {\n this.metadata[term] = Object.create(null)\n this.metadata[term][field] = metadata\n return\n }\n\n if (!(field in this.metadata[term])) {\n this.metadata[term][field] = metadata\n return\n }\n\n var metadataKeys = Object.keys(metadata)\n\n for (var i = 0; i < metadataKeys.length; i++) {\n var key = metadataKeys[i]\n\n if (key in this.metadata[term][field]) {\n this.metadata[term][field][key] = this.metadata[term][field][key].concat(metadata[key])\n } else {\n this.metadata[term][field][key] = metadata[key]\n }\n }\n}\n/**\n * A lunr.Query provides a programmatic way of defining queries to be performed\n * against a {@link lunr.Index}.\n *\n * Prefer constructing a lunr.Query using the {@link lunr.Index#query} method\n * so the query object is pre-initialized with the right index fields.\n *\n * @constructor\n * @property {lunr.Query~Clause[]} clauses - An array of query clauses.\n * @property {string[]} allFields - An array of all available fields in a lunr.Index.\n */\nlunr.Query = function (allFields) {\n this.clauses = []\n this.allFields = allFields\n}\n\n/**\n * Constants for indicating what kind of automatic wildcard insertion will be used when constructing a query clause.\n *\n * This allows wildcards to be added to the beginning and end of a term without having to manually do any string\n * concatenation.\n *\n * The wildcard constants can be bitwise combined to select both leading and trailing wildcards.\n *\n * @constant\n * @default\n * @property {number} wildcard.NONE - The term will have no wildcards inserted, this is the default behaviour\n * @property {number} wildcard.LEADING - Prepend the term with a wildcard, unless a leading wildcard already exists\n * @property {number} wildcard.TRAILING - Append a wildcard to the term, unless a trailing wildcard already exists\n * @see lunr.Query~Clause\n * @see lunr.Query#clause\n * @see lunr.Query#term\n * @example query term with trailing wildcard\n * query.term('foo', { wildcard: lunr.Query.wildcard.TRAILING })\n * @example query term with leading and trailing wildcard\n * query.term('foo', {\n * wildcard: lunr.Query.wildcard.LEADING | lunr.Query.wildcard.TRAILING\n * })\n */\n\nlunr.Query.wildcard = new String (\"*\")\nlunr.Query.wildcard.NONE = 0\nlunr.Query.wildcard.LEADING = 1\nlunr.Query.wildcard.TRAILING = 2\n\n/**\n * Constants for indicating what kind of presence a term must have in matching documents.\n *\n * @constant\n * @enum {number}\n * @see lunr.Query~Clause\n * @see lunr.Query#clause\n * @see lunr.Query#term\n * @example query term with required presence\n * query.term('foo', { presence: lunr.Query.presence.REQUIRED })\n */\nlunr.Query.presence = {\n /**\n * Term's presence in a document is optional, this is the default value.\n */\n OPTIONAL: 1,\n\n /**\n * Term's presence in a document is required, documents that do not contain\n * this term will not be returned.\n */\n REQUIRED: 2,\n\n /**\n * Term's presence in a document is prohibited, documents that do contain\n * this term will not be returned.\n */\n PROHIBITED: 3\n}\n\n/**\n * A single clause in a {@link lunr.Query} contains a term and details on how to\n * match that term against a {@link lunr.Index}.\n *\n * @typedef {Object} lunr.Query~Clause\n * @property {string[]} fields - The fields in an index this clause should be matched against.\n * @property {number} [boost=1] - Any boost that should be applied when matching this clause.\n * @property {number} [editDistance] - Whether the term should have fuzzy matching applied, and how fuzzy the match should be.\n * @property {boolean} [usePipeline] - Whether the term should be passed through the search pipeline.\n * @property {number} [wildcard=lunr.Query.wildcard.NONE] - Whether the term should have wildcards appended or prepended.\n * @property {number} [presence=lunr.Query.presence.OPTIONAL] - The terms presence in any matching documents.\n */\n\n/**\n * Adds a {@link lunr.Query~Clause} to this query.\n *\n * Unless the clause contains the fields to be matched all fields will be matched. In addition\n * a default boost of 1 is applied to the clause.\n *\n * @param {lunr.Query~Clause} clause - The clause to add to this query.\n * @see lunr.Query~Clause\n * @returns {lunr.Query}\n */\nlunr.Query.prototype.clause = function (clause) {\n if (!('fields' in clause)) {\n clause.fields = this.allFields\n }\n\n if (!('boost' in clause)) {\n clause.boost = 1\n }\n\n if (!('usePipeline' in clause)) {\n clause.usePipeline = true\n }\n\n if (!('wildcard' in clause)) {\n clause.wildcard = lunr.Query.wildcard.NONE\n }\n\n if ((clause.wildcard & lunr.Query.wildcard.LEADING) && (clause.term.charAt(0) != lunr.Query.wildcard)) {\n clause.term = \"*\" + clause.term\n }\n\n if ((clause.wildcard & lunr.Query.wildcard.TRAILING) && (clause.term.slice(-1) != lunr.Query.wildcard)) {\n clause.term = \"\" + clause.term + \"*\"\n }\n\n if (!('presence' in clause)) {\n clause.presence = lunr.Query.presence.OPTIONAL\n }\n\n this.clauses.push(clause)\n\n return this\n}\n\n/**\n * A negated query is one in which every clause has a presence of\n * prohibited. These queries require some special processing to return\n * the expected results.\n *\n * @returns boolean\n */\nlunr.Query.prototype.isNegated = function () {\n for (var i = 0; i < this.clauses.length; i++) {\n if (this.clauses[i].presence != lunr.Query.presence.PROHIBITED) {\n return false\n }\n }\n\n return true\n}\n\n/**\n * Adds a term to the current query, under the covers this will create a {@link lunr.Query~Clause}\n * to the list of clauses that make up this query.\n *\n * The term is used as is, i.e. no tokenization will be performed by this method. Instead conversion\n * to a token or token-like string should be done before calling this method.\n *\n * The term will be converted to a string by calling `toString`. Multiple terms can be passed as an\n * array, each term in the array will share the same options.\n *\n * @param {object|object[]} term - The term(s) to add to the query.\n * @param {object} [options] - Any additional properties to add to the query clause.\n * @returns {lunr.Query}\n * @see lunr.Query#clause\n * @see lunr.Query~Clause\n * @example adding a single term to a query\n * query.term(\"foo\")\n * @example adding a single term to a query and specifying search fields, term boost and automatic trailing wildcard\n * query.term(\"foo\", {\n * fields: [\"title\"],\n * boost: 10,\n * wildcard: lunr.Query.wildcard.TRAILING\n * })\n * @example using lunr.tokenizer to convert a string to tokens before using them as terms\n * query.term(lunr.tokenizer(\"foo bar\"))\n */\nlunr.Query.prototype.term = function (term, options) {\n if (Array.isArray(term)) {\n term.forEach(function (t) { this.term(t, lunr.utils.clone(options)) }, this)\n return this\n }\n\n var clause = options || {}\n clause.term = term.toString()\n\n this.clause(clause)\n\n return this\n}\nlunr.QueryParseError = function (message, start, end) {\n this.name = \"QueryParseError\"\n this.message = message\n this.start = start\n this.end = end\n}\n\nlunr.QueryParseError.prototype = new Error\nlunr.QueryLexer = function (str) {\n this.lexemes = []\n this.str = str\n this.length = str.length\n this.pos = 0\n this.start = 0\n this.escapeCharPositions = []\n}\n\nlunr.QueryLexer.prototype.run = function () {\n var state = lunr.QueryLexer.lexText\n\n while (state) {\n state = state(this)\n }\n}\n\nlunr.QueryLexer.prototype.sliceString = function () {\n var subSlices = [],\n sliceStart = this.start,\n sliceEnd = this.pos\n\n for (var i = 0; i < this.escapeCharPositions.length; i++) {\n sliceEnd = this.escapeCharPositions[i]\n subSlices.push(this.str.slice(sliceStart, sliceEnd))\n sliceStart = sliceEnd + 1\n }\n\n subSlices.push(this.str.slice(sliceStart, this.pos))\n this.escapeCharPositions.length = 0\n\n return subSlices.join('')\n}\n\nlunr.QueryLexer.prototype.emit = function (type) {\n this.lexemes.push({\n type: type,\n str: this.sliceString(),\n start: this.start,\n end: this.pos\n })\n\n this.start = this.pos\n}\n\nlunr.QueryLexer.prototype.escapeCharacter = function () {\n this.escapeCharPositions.push(this.pos - 1)\n this.pos += 1\n}\n\nlunr.QueryLexer.prototype.next = function () {\n if (this.pos >= this.length) {\n return lunr.QueryLexer.EOS\n }\n\n var char = this.str.charAt(this.pos)\n this.pos += 1\n return char\n}\n\nlunr.QueryLexer.prototype.width = function () {\n return this.pos - this.start\n}\n\nlunr.QueryLexer.prototype.ignore = function () {\n if (this.start == this.pos) {\n this.pos += 1\n }\n\n this.start = this.pos\n}\n\nlunr.QueryLexer.prototype.backup = function () {\n this.pos -= 1\n}\n\nlunr.QueryLexer.prototype.acceptDigitRun = function () {\n var char, charCode\n\n do {\n char = this.next()\n charCode = char.charCodeAt(0)\n } while (charCode > 47 && charCode < 58)\n\n if (char != lunr.QueryLexer.EOS) {\n this.backup()\n }\n}\n\nlunr.QueryLexer.prototype.more = function () {\n return this.pos < this.length\n}\n\nlunr.QueryLexer.EOS = 'EOS'\nlunr.QueryLexer.FIELD = 'FIELD'\nlunr.QueryLexer.TERM = 'TERM'\nlunr.QueryLexer.EDIT_DISTANCE = 'EDIT_DISTANCE'\nlunr.QueryLexer.BOOST = 'BOOST'\nlunr.QueryLexer.PRESENCE = 'PRESENCE'\n\nlunr.QueryLexer.lexField = function (lexer) {\n lexer.backup()\n lexer.emit(lunr.QueryLexer.FIELD)\n lexer.ignore()\n return lunr.QueryLexer.lexText\n}\n\nlunr.QueryLexer.lexTerm = function (lexer) {\n if (lexer.width() > 1) {\n lexer.backup()\n lexer.emit(lunr.QueryLexer.TERM)\n }\n\n lexer.ignore()\n\n if (lexer.more()) {\n return lunr.QueryLexer.lexText\n }\n}\n\nlunr.QueryLexer.lexEditDistance = function (lexer) {\n lexer.ignore()\n lexer.acceptDigitRun()\n lexer.emit(lunr.QueryLexer.EDIT_DISTANCE)\n return lunr.QueryLexer.lexText\n}\n\nlunr.QueryLexer.lexBoost = function (lexer) {\n lexer.ignore()\n lexer.acceptDigitRun()\n lexer.emit(lunr.QueryLexer.BOOST)\n return lunr.QueryLexer.lexText\n}\n\nlunr.QueryLexer.lexEOS = function (lexer) {\n if (lexer.width() > 0) {\n lexer.emit(lunr.QueryLexer.TERM)\n }\n}\n\n// This matches the separator used when tokenising fields\n// within a document. These should match otherwise it is\n// not possible to search for some tokens within a document.\n//\n// It is possible for the user to change the separator on the\n// tokenizer so it _might_ clash with any other of the special\n// characters already used within the search string, e.g. :.\n//\n// This means that it is possible to change the separator in\n// such a way that makes some words unsearchable using a search\n// string.\nlunr.QueryLexer.termSeparator = lunr.tokenizer.separator\n\nlunr.QueryLexer.lexText = function (lexer) {\n while (true) {\n var char = lexer.next()\n\n if (char == lunr.QueryLexer.EOS) {\n return lunr.QueryLexer.lexEOS\n }\n\n // Escape character is '\\'\n if (char.charCodeAt(0) == 92) {\n lexer.escapeCharacter()\n continue\n }\n\n if (char == \":\") {\n return lunr.QueryLexer.lexField\n }\n\n if (char == \"~\") {\n lexer.backup()\n if (lexer.width() > 0) {\n lexer.emit(lunr.QueryLexer.TERM)\n }\n return lunr.QueryLexer.lexEditDistance\n }\n\n if (char == \"^\") {\n lexer.backup()\n if (lexer.width() > 0) {\n lexer.emit(lunr.QueryLexer.TERM)\n }\n return lunr.QueryLexer.lexBoost\n }\n\n // \"+\" indicates term presence is required\n // checking for length to ensure that only\n // leading \"+\" are considered\n if (char == \"+\" && lexer.width() === 1) {\n lexer.emit(lunr.QueryLexer.PRESENCE)\n return lunr.QueryLexer.lexText\n }\n\n // \"-\" indicates term presence is prohibited\n // checking for length to ensure that only\n // leading \"-\" are considered\n if (char == \"-\" && lexer.width() === 1) {\n lexer.emit(lunr.QueryLexer.PRESENCE)\n return lunr.QueryLexer.lexText\n }\n\n if (char.match(lunr.QueryLexer.termSeparator)) {\n return lunr.QueryLexer.lexTerm\n }\n }\n}\n\nlunr.QueryParser = function (str, query) {\n this.lexer = new lunr.QueryLexer (str)\n this.query = query\n this.currentClause = {}\n this.lexemeIdx = 0\n}\n\nlunr.QueryParser.prototype.parse = function () {\n this.lexer.run()\n this.lexemes = this.lexer.lexemes\n\n var state = lunr.QueryParser.parseClause\n\n while (state) {\n state = state(this)\n }\n\n return this.query\n}\n\nlunr.QueryParser.prototype.peekLexeme = function () {\n return this.lexemes[this.lexemeIdx]\n}\n\nlunr.QueryParser.prototype.consumeLexeme = function () {\n var lexeme = this.peekLexeme()\n this.lexemeIdx += 1\n return lexeme\n}\n\nlunr.QueryParser.prototype.nextClause = function () {\n var completedClause = this.currentClause\n this.query.clause(completedClause)\n this.currentClause = {}\n}\n\nlunr.QueryParser.parseClause = function (parser) {\n var lexeme = parser.peekLexeme()\n\n if (lexeme == undefined) {\n return\n }\n\n switch (lexeme.type) {\n case lunr.QueryLexer.PRESENCE:\n return lunr.QueryParser.parsePresence\n case lunr.QueryLexer.FIELD:\n return lunr.QueryParser.parseField\n case lunr.QueryLexer.TERM:\n return lunr.QueryParser.parseTerm\n default:\n var errorMessage = \"expected either a field or a term, found \" + lexeme.type\n\n if (lexeme.str.length >= 1) {\n errorMessage += \" with value '\" + lexeme.str + \"'\"\n }\n\n throw new lunr.QueryParseError (errorMessage, lexeme.start, lexeme.end)\n }\n}\n\nlunr.QueryParser.parsePresence = function (parser) {\n var lexeme = parser.consumeLexeme()\n\n if (lexeme == undefined) {\n return\n }\n\n switch (lexeme.str) {\n case \"-\":\n parser.currentClause.presence = lunr.Query.presence.PROHIBITED\n break\n case \"+\":\n parser.currentClause.presence = lunr.Query.presence.REQUIRED\n break\n default:\n var errorMessage = \"unrecognised presence operator'\" + lexeme.str + \"'\"\n throw new lunr.QueryParseError (errorMessage, lexeme.start, lexeme.end)\n }\n\n var nextLexeme = parser.peekLexeme()\n\n if (nextLexeme == undefined) {\n var errorMessage = \"expecting term or field, found nothing\"\n throw new lunr.QueryParseError (errorMessage, lexeme.start, lexeme.end)\n }\n\n switch (nextLexeme.type) {\n case lunr.QueryLexer.FIELD:\n return lunr.QueryParser.parseField\n case lunr.QueryLexer.TERM:\n return lunr.QueryParser.parseTerm\n default:\n var errorMessage = \"expecting term or field, found '\" + nextLexeme.type + \"'\"\n throw new lunr.QueryParseError (errorMessage, nextLexeme.start, nextLexeme.end)\n }\n}\n\nlunr.QueryParser.parseField = function (parser) {\n var lexeme = parser.consumeLexeme()\n\n if (lexeme == undefined) {\n return\n }\n\n if (parser.query.allFields.indexOf(lexeme.str) == -1) {\n var possibleFields = parser.query.allFields.map(function (f) { return \"'\" + f + \"'\" }).join(', '),\n errorMessage = \"unrecognised field '\" + lexeme.str + \"', possible fields: \" + possibleFields\n\n throw new lunr.QueryParseError (errorMessage, lexeme.start, lexeme.end)\n }\n\n parser.currentClause.fields = [lexeme.str]\n\n var nextLexeme = parser.peekLexeme()\n\n if (nextLexeme == undefined) {\n var errorMessage = \"expecting term, found nothing\"\n throw new lunr.QueryParseError (errorMessage, lexeme.start, lexeme.end)\n }\n\n switch (nextLexeme.type) {\n case lunr.QueryLexer.TERM:\n return lunr.QueryParser.parseTerm\n default:\n var errorMessage = \"expecting term, found '\" + nextLexeme.type + \"'\"\n throw new lunr.QueryParseError (errorMessage, nextLexeme.start, nextLexeme.end)\n }\n}\n\nlunr.QueryParser.parseTerm = function (parser) {\n var lexeme = parser.consumeLexeme()\n\n if (lexeme == undefined) {\n return\n }\n\n parser.currentClause.term = lexeme.str.toLowerCase()\n\n if (lexeme.str.indexOf(\"*\") != -1) {\n parser.currentClause.usePipeline = false\n }\n\n var nextLexeme = parser.peekLexeme()\n\n if (nextLexeme == undefined) {\n parser.nextClause()\n return\n }\n\n switch (nextLexeme.type) {\n case lunr.QueryLexer.TERM:\n parser.nextClause()\n return lunr.QueryParser.parseTerm\n case lunr.QueryLexer.FIELD:\n parser.nextClause()\n return lunr.QueryParser.parseField\n case lunr.QueryLexer.EDIT_DISTANCE:\n return lunr.QueryParser.parseEditDistance\n case lunr.QueryLexer.BOOST:\n return lunr.QueryParser.parseBoost\n case lunr.QueryLexer.PRESENCE:\n parser.nextClause()\n return lunr.QueryParser.parsePresence\n default:\n var errorMessage = \"Unexpected lexeme type '\" + nextLexeme.type + \"'\"\n throw new lunr.QueryParseError (errorMessage, nextLexeme.start, nextLexeme.end)\n }\n}\n\nlunr.QueryParser.parseEditDistance = function (parser) {\n var lexeme = parser.consumeLexeme()\n\n if (lexeme == undefined) {\n return\n }\n\n var editDistance = parseInt(lexeme.str, 10)\n\n if (isNaN(editDistance)) {\n var errorMessage = \"edit distance must be numeric\"\n throw new lunr.QueryParseError (errorMessage, lexeme.start, lexeme.end)\n }\n\n parser.currentClause.editDistance = editDistance\n\n var nextLexeme = parser.peekLexeme()\n\n if (nextLexeme == undefined) {\n parser.nextClause()\n return\n }\n\n switch (nextLexeme.type) {\n case lunr.QueryLexer.TERM:\n parser.nextClause()\n return lunr.QueryParser.parseTerm\n case lunr.QueryLexer.FIELD:\n parser.nextClause()\n return lunr.QueryParser.parseField\n case lunr.QueryLexer.EDIT_DISTANCE:\n return lunr.QueryParser.parseEditDistance\n case lunr.QueryLexer.BOOST:\n return lunr.QueryParser.parseBoost\n case lunr.QueryLexer.PRESENCE:\n parser.nextClause()\n return lunr.QueryParser.parsePresence\n default:\n var errorMessage = \"Unexpected lexeme type '\" + nextLexeme.type + \"'\"\n throw new lunr.QueryParseError (errorMessage, nextLexeme.start, nextLexeme.end)\n }\n}\n\nlunr.QueryParser.parseBoost = function (parser) {\n var lexeme = parser.consumeLexeme()\n\n if (lexeme == undefined) {\n return\n }\n\n var boost = parseInt(lexeme.str, 10)\n\n if (isNaN(boost)) {\n var errorMessage = \"boost must be numeric\"\n throw new lunr.QueryParseError (errorMessage, lexeme.start, lexeme.end)\n }\n\n parser.currentClause.boost = boost\n\n var nextLexeme = parser.peekLexeme()\n\n if (nextLexeme == undefined) {\n parser.nextClause()\n return\n }\n\n switch (nextLexeme.type) {\n case lunr.QueryLexer.TERM:\n parser.nextClause()\n return lunr.QueryParser.parseTerm\n case lunr.QueryLexer.FIELD:\n parser.nextClause()\n return lunr.QueryParser.parseField\n case lunr.QueryLexer.EDIT_DISTANCE:\n return lunr.QueryParser.parseEditDistance\n case lunr.QueryLexer.BOOST:\n return lunr.QueryParser.parseBoost\n case lunr.QueryLexer.PRESENCE:\n parser.nextClause()\n return lunr.QueryParser.parsePresence\n default:\n var errorMessage = \"Unexpected lexeme type '\" + nextLexeme.type + \"'\"\n throw new lunr.QueryParseError (errorMessage, nextLexeme.start, nextLexeme.end)\n }\n}\n\n /**\n * export the module via AMD, CommonJS or as a browser global\n * Export code from https://github.com/umdjs/umd/blob/master/returnExports.js\n */\n ;(function (root, factory) {\n if (typeof define === 'function' && define.amd) {\n // AMD. Register as an anonymous module.\n define(factory)\n } else if (typeof exports === 'object') {\n /**\n * Node. Does not work with strict CommonJS, but\n * only CommonJS-like enviroments that support module.exports,\n * like Node.\n */\n module.exports = factory()\n } else {\n // Browser globals (root is window)\n root.lunr = factory()\n }\n }(this, function () {\n /**\n * Just return a value to define the module export.\n * This example returns an object, but the module\n * can return a function as the exported value.\n */\n return lunr\n }))\n})();\n", "/*!\n * escape-html\n * Copyright(c) 2012-2013 TJ Holowaychuk\n * Copyright(c) 2015 Andreas Lubbe\n * Copyright(c) 2015 Tiancheng \"Timothy\" Gu\n * MIT Licensed\n */\n\n'use strict';\n\n/**\n * Module variables.\n * @private\n */\n\nvar matchHtmlRegExp = /[\"'&<>]/;\n\n/**\n * Module exports.\n * @public\n */\n\nmodule.exports = escapeHtml;\n\n/**\n * Escape special characters in the given string of html.\n *\n * @param {string} string The string to escape for inserting into HTML\n * @return {string}\n * @public\n */\n\nfunction escapeHtml(string) {\n var str = '' + string;\n var match = matchHtmlRegExp.exec(str);\n\n if (!match) {\n return str;\n }\n\n var escape;\n var html = '';\n var index = 0;\n var lastIndex = 0;\n\n for (index = match.index; index < str.length; index++) {\n switch (str.charCodeAt(index)) {\n case 34: // \"\n escape = '"';\n break;\n case 38: // &\n escape = '&';\n break;\n case 39: // '\n escape = ''';\n break;\n case 60: // <\n escape = '<';\n break;\n case 62: // >\n escape = '>';\n break;\n default:\n continue;\n }\n\n if (lastIndex !== index) {\n html += str.substring(lastIndex, index);\n }\n\n lastIndex = index + 1;\n html += escape;\n }\n\n return lastIndex !== index\n ? html + str.substring(lastIndex, index)\n : html;\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A RTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport lunr from \"lunr\"\n\nimport \"~/polyfills\"\n\nimport { Search, SearchIndexConfig } from \"../../_\"\nimport {\n SearchMessage,\n SearchMessageType\n} from \"../message\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Add support for usage with `iframe-worker` polyfill\n *\n * While `importScripts` is synchronous when executed inside of a web worker,\n * it's not possible to provide a synchronous polyfilled implementation. The\n * cool thing is that awaiting a non-Promise is a noop, so extending the type\n * definition to return a `Promise` shouldn't break anything.\n *\n * @see https://bit.ly/2PjDnXi - GitHub comment\n */\ndeclare global {\n function importScripts(...urls: string[]): Promise | void\n}\n\n/* ----------------------------------------------------------------------------\n * Data\n * ------------------------------------------------------------------------- */\n\n/**\n * Search index\n */\nlet index: Search\n\n/* ----------------------------------------------------------------------------\n * Helper functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Fetch (= import) multi-language support through `lunr-languages`\n *\n * This function automatically imports the stemmers necessary to process the\n * languages, which are defined through the search index configuration.\n *\n * If the worker runs inside of an `iframe` (when using `iframe-worker` as\n * a shim), the base URL for the stemmers to be loaded must be determined by\n * searching for the first `script` element with a `src` attribute, which will\n * contain the contents of this script.\n *\n * @param config - Search index configuration\n *\n * @returns Promise resolving with no result\n */\nasync function setupSearchLanguages(\n config: SearchIndexConfig\n): Promise {\n let base = \"../lunr\"\n\n /* Detect `iframe-worker` and fix base URL */\n if (typeof parent !== \"undefined\" && \"IFrameWorker\" in parent) {\n const worker = document.querySelector(\"script[src]\")!\n const [path] = worker.src.split(\"/worker\")\n\n /* Prefix base with path */\n base = base.replace(\"..\", path)\n }\n\n /* Add scripts for languages */\n const scripts = []\n for (const lang of config.lang) {\n switch (lang) {\n\n /* Add segmenter for Japanese */\n case \"ja\":\n scripts.push(`${base}/tinyseg.js`)\n break\n\n /* Add segmenter for Hindi and Thai */\n case \"hi\":\n case \"th\":\n scripts.push(`${base}/wordcut.js`)\n break\n }\n\n /* Add language support */\n if (lang !== \"en\")\n scripts.push(`${base}/min/lunr.${lang}.min.js`)\n }\n\n /* Add multi-language support */\n if (config.lang.length > 1)\n scripts.push(`${base}/min/lunr.multi.min.js`)\n\n /* Load scripts synchronously */\n if (scripts.length)\n await importScripts(\n `${base}/min/lunr.stemmer.support.min.js`,\n ...scripts\n )\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Message handler\n *\n * @param message - Source message\n *\n * @returns Target message\n */\nexport async function handler(\n message: SearchMessage\n): Promise {\n switch (message.type) {\n\n /* Search setup message */\n case SearchMessageType.SETUP:\n await setupSearchLanguages(message.data.config)\n index = new Search(message.data)\n return {\n type: SearchMessageType.READY\n }\n\n /* Search query message */\n case SearchMessageType.QUERY:\n return {\n type: SearchMessageType.RESULT,\n data: index ? index.search(message.data) : { items: [] }\n }\n\n /* All other messages */\n default:\n throw new TypeError(\"Invalid message type\")\n }\n}\n\n/* ----------------------------------------------------------------------------\n * Worker\n * ------------------------------------------------------------------------- */\n\n/* @ts-expect-error - expose Lunr.js in global scope, or stemmers won't work */\nself.lunr = lunr\n\n/* Handle messages */\naddEventListener(\"message\", async ev => {\n postMessage(await handler(ev.data))\n})\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\n/* ----------------------------------------------------------------------------\n * Polyfills\n * ------------------------------------------------------------------------- */\n\n/* Polyfill `Object.entries` */\nif (!Object.entries)\n Object.entries = function (obj: object) {\n const data: [string, string][] = []\n for (const key of Object.keys(obj))\n // @ts-expect-error - ignore property access warning\n data.push([key, obj[key]])\n\n /* Return entries */\n return data\n }\n\n/* Polyfill `Object.values` */\nif (!Object.values)\n Object.values = function (obj: object) {\n const data: string[] = []\n for (const key of Object.keys(obj))\n // @ts-expect-error - ignore property access warning\n data.push(obj[key])\n\n /* Return values */\n return data\n }\n\n/* ------------------------------------------------------------------------- */\n\n/* Polyfills for `Element` */\nif (typeof Element !== \"undefined\") {\n\n /* Polyfill `Element.scrollTo` */\n if (!Element.prototype.scrollTo)\n Element.prototype.scrollTo = function (\n x?: ScrollToOptions | number, y?: number\n ): void {\n if (typeof x === \"object\") {\n this.scrollLeft = x.left!\n this.scrollTop = x.top!\n } else {\n this.scrollLeft = x!\n this.scrollTop = y!\n }\n }\n\n /* Polyfill `Element.replaceWith` */\n if (!Element.prototype.replaceWith)\n Element.prototype.replaceWith = function (\n ...nodes: Array\n ): void {\n const parent = this.parentNode\n if (parent) {\n if (nodes.length === 0)\n parent.removeChild(this)\n\n /* Replace children and create text nodes */\n for (let i = nodes.length - 1; i >= 0; i--) {\n let node = nodes[i]\n if (typeof node === \"string\")\n node = document.createTextNode(node)\n else if (node.parentNode)\n node.parentNode.removeChild(node)\n\n /* Replace child or insert before previous sibling */\n if (!i)\n parent.replaceChild(node, this)\n else\n parent.insertBefore(this.previousSibling!, node)\n }\n }\n }\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport escapeHTML from \"escape-html\"\n\nimport { SearchIndexDocument } from \"../_\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Search document\n */\nexport interface SearchDocument extends SearchIndexDocument {\n parent?: SearchIndexDocument /* Parent article */\n}\n\n/* ------------------------------------------------------------------------- */\n\n/**\n * Search document mapping\n */\nexport type SearchDocumentMap = Map\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Create a search document mapping\n *\n * @param docs - Search index documents\n *\n * @returns Search document map\n */\nexport function setupSearchDocumentMap(\n docs: SearchIndexDocument[]\n): SearchDocumentMap {\n const documents = new Map()\n const parents = new Set()\n for (const doc of docs) {\n const [path, hash] = doc.location.split(\"#\")\n\n /* Extract location, title and tags */\n const location = doc.location\n const title = doc.title\n const tags = doc.tags\n\n /* Escape and cleanup text */\n const text = escapeHTML(doc.text)\n .replace(/\\s+(?=[,.:;!?])/g, \"\")\n .replace(/\\s+/g, \" \")\n\n /* Handle section */\n if (hash) {\n const parent = documents.get(path)!\n\n /* Ignore first section, override article */\n if (!parents.has(parent)) {\n parent.title = doc.title\n parent.text = text\n\n /* Remember that we processed the article */\n parents.add(parent)\n\n /* Add subsequent section */\n } else {\n documents.set(location, {\n location,\n title,\n text,\n parent\n })\n }\n\n /* Add article */\n } else {\n documents.set(location, {\n location,\n title,\n text,\n ...tags && { tags }\n })\n }\n }\n return documents\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport escapeHTML from \"escape-html\"\n\nimport { SearchIndexConfig } from \"../_\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Search highlight function\n *\n * @param value - Value\n *\n * @returns Highlighted value\n */\nexport type SearchHighlightFn = (value: string) => string\n\n/**\n * Search highlight factory function\n *\n * @param query - Query value\n *\n * @returns Search highlight function\n */\nexport type SearchHighlightFactoryFn = (query: string) => SearchHighlightFn\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Create a search highlighter\n *\n * @param config - Search index configuration\n * @param escape - Whether to escape HTML\n *\n * @returns Search highlight factory function\n */\nexport function setupSearchHighlighter(\n config: SearchIndexConfig, escape: boolean\n): SearchHighlightFactoryFn {\n const separator = new RegExp(config.separator, \"img\")\n const highlight = (_: unknown, data: string, term: string) => {\n return `${data}${term}`\n }\n\n /* Return factory function */\n return (query: string) => {\n query = query\n .replace(/[\\s*+\\-:~^]+/g, \" \")\n .trim()\n\n /* Create search term match expression */\n const match = new RegExp(`(^|${config.separator})(${\n query\n .replace(/[|\\\\{}()[\\]^$+*?.-]/g, \"\\\\$&\")\n .replace(separator, \"|\")\n })`, \"img\")\n\n /* Highlight string value */\n return value => (\n escape\n ? escapeHTML(value)\n : value\n )\n .replace(match, highlight)\n .replace(/<\\/mark>(\\s+)]*>/img, \"$1\")\n }\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Search query clause\n */\nexport interface SearchQueryClause {\n presence: lunr.Query.presence /* Clause presence */\n term: string /* Clause term */\n}\n\n/* ------------------------------------------------------------------------- */\n\n/**\n * Search query terms\n */\nexport type SearchQueryTerms = Record\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Parse a search query for analysis\n *\n * @param value - Query value\n *\n * @returns Search query clauses\n */\nexport function parseSearchQuery(\n value: string\n): SearchQueryClause[] {\n const query = new (lunr as any).Query([\"title\", \"text\"])\n const parser = new (lunr as any).QueryParser(value, query)\n\n /* Parse and return query clauses */\n parser.parse()\n return query.clauses\n}\n\n/**\n * Analyze the search query clauses in regard to the search terms found\n *\n * @param query - Search query clauses\n * @param terms - Search terms\n *\n * @returns Search query terms\n */\nexport function getSearchQueryTerms(\n query: SearchQueryClause[], terms: string[]\n): SearchQueryTerms {\n const clauses = new Set(query)\n\n /* Match query clauses against terms */\n const result: SearchQueryTerms = {}\n for (let t = 0; t < terms.length; t++)\n for (const clause of clauses)\n if (terms[t].startsWith(clause.term)) {\n result[clause.term] = true\n clauses.delete(clause)\n }\n\n /* Annotate unmatched non-stopword query clauses */\n for (const clause of clauses)\n if (lunr.stopWordFilter?.(clause.term as any))\n result[clause.term] = false\n\n /* Return query terms */\n return result\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n SearchDocument,\n SearchDocumentMap,\n setupSearchDocumentMap\n} from \"../document\"\nimport {\n SearchHighlightFactoryFn,\n setupSearchHighlighter\n} from \"../highlighter\"\nimport { SearchOptions } from \"../options\"\nimport {\n SearchQueryTerms,\n getSearchQueryTerms,\n parseSearchQuery\n} from \"../query\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Search index configuration\n */\nexport interface SearchIndexConfig {\n lang: string[] /* Search languages */\n separator: string /* Search separator */\n}\n\n/**\n * Search index document\n */\nexport interface SearchIndexDocument {\n location: string /* Document location */\n title: string /* Document title */\n text: string /* Document text */\n tags?: string[] /* Document tags */\n boost?: number /* Document boost */\n}\n\n/* ------------------------------------------------------------------------- */\n\n/**\n * Search index\n *\n * This interfaces describes the format of the `search_index.json` file which\n * is automatically built by the MkDocs search plugin.\n */\nexport interface SearchIndex {\n config: SearchIndexConfig /* Search index configuration */\n docs: SearchIndexDocument[] /* Search index documents */\n options: SearchOptions /* Search options */\n}\n\n/* ------------------------------------------------------------------------- */\n\n/**\n * Search metadata\n */\nexport interface SearchMetadata {\n score: number /* Score (relevance) */\n terms: SearchQueryTerms /* Search query terms */\n}\n\n/* ------------------------------------------------------------------------- */\n\n/**\n * Search result document\n */\nexport type SearchResultDocument = SearchDocument & SearchMetadata\n\n/**\n * Search result item\n */\nexport type SearchResultItem = SearchResultDocument[]\n\n/* ------------------------------------------------------------------------- */\n\n/**\n * Search result\n */\nexport interface SearchResult {\n items: SearchResultItem[] /* Search result items */\n suggestions?: string[] /* Search suggestions */\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Compute the difference of two lists of strings\n *\n * @param a - 1st list of strings\n * @param b - 2nd list of strings\n *\n * @returns Difference\n */\nfunction difference(a: string[], b: string[]): string[] {\n const [x, y] = [new Set(a), new Set(b)]\n return [\n ...new Set([...x].filter(value => !y.has(value)))\n ]\n}\n\n/* ----------------------------------------------------------------------------\n * Class\n * ------------------------------------------------------------------------- */\n\n/**\n * Search index\n */\nexport class Search {\n\n /**\n * Search document mapping\n *\n * A mapping of URLs (including hash fragments) to the actual articles and\n * sections of the documentation. The search document mapping must be created\n * regardless of whether the index was prebuilt or not, as Lunr.js itself\n * only stores the actual index.\n */\n protected documents: SearchDocumentMap\n\n /**\n * Search highlight factory function\n */\n protected highlight: SearchHighlightFactoryFn\n\n /**\n * The underlying Lunr.js search index\n */\n protected index: lunr.Index\n\n /**\n * Search options\n */\n protected options: SearchOptions\n\n /**\n * Create the search integration\n *\n * @param data - Search index\n */\n public constructor({ config, docs, options }: SearchIndex) {\n this.options = options\n\n /* Set up document map and highlighter factory */\n this.documents = setupSearchDocumentMap(docs)\n this.highlight = setupSearchHighlighter(config, false)\n\n /* Set separator for tokenizer */\n lunr.tokenizer.separator = new RegExp(config.separator)\n\n /* Create search index */\n this.index = lunr(function () {\n\n /* Set up multi-language support */\n if (config.lang.length === 1 && config.lang[0] !== \"en\") {\n this.use((lunr as any)[config.lang[0]])\n } else if (config.lang.length > 1) {\n this.use((lunr as any).multiLanguage(...config.lang))\n }\n\n /* Compute functions to be removed from the pipeline */\n const fns = difference([\n \"trimmer\", \"stopWordFilter\", \"stemmer\"\n ], options.pipeline)\n\n /* Remove functions from the pipeline for registered languages */\n for (const lang of config.lang.map(language => (\n language === \"en\" ? lunr : (lunr as any)[language]\n ))) {\n for (const fn of fns) {\n this.pipeline.remove(lang[fn])\n this.searchPipeline.remove(lang[fn])\n }\n }\n\n /* Set up reference */\n this.ref(\"location\")\n\n /* Set up fields */\n this.field(\"title\", { boost: 1e3 })\n this.field(\"text\")\n this.field(\"tags\", { boost: 1e6, extractor: doc => {\n const { tags = [] } = doc as SearchDocument\n return tags.reduce((list, tag) => [\n ...list,\n ...lunr.tokenizer(tag)\n ], [] as lunr.Token[])\n } })\n\n /* Index documents */\n for (const doc of docs)\n this.add(doc, { boost: doc.boost })\n })\n }\n\n /**\n * Search for matching documents\n *\n * The search index which MkDocs provides is divided up into articles, which\n * contain the whole content of the individual pages, and sections, which only\n * contain the contents of the subsections obtained by breaking the individual\n * pages up at `h1` ... `h6`. As there may be many sections on different pages\n * with identical titles (for example within this very project, e.g. \"Usage\"\n * or \"Installation\"), they need to be put into the context of the containing\n * page. For this reason, section results are grouped within their respective\n * articles which are the top-level results that are returned.\n *\n * @param query - Query value\n *\n * @returns Search results\n */\n public search(query: string): SearchResult {\n if (query) {\n try {\n const highlight = this.highlight(query)\n\n /* Parse query to extract clauses for analysis */\n const clauses = parseSearchQuery(query)\n .filter(clause => (\n clause.presence !== lunr.Query.presence.PROHIBITED\n ))\n\n /* Perform search and post-process results */\n const groups = this.index.search(`${query}*`)\n\n /* Apply post-query boosts based on title and search query terms */\n .reduce((item, { ref, score, matchData }) => {\n const document = this.documents.get(ref)\n if (typeof document !== \"undefined\") {\n const { location, title, text, tags, parent } = document\n\n /* Compute and analyze search query terms */\n const terms = getSearchQueryTerms(\n clauses,\n Object.keys(matchData.metadata)\n )\n\n /* Highlight title and text and apply post-query boosts */\n const boost = +!parent + +Object.values(terms).every(t => t)\n item.push({\n location,\n title: highlight(title),\n text: highlight(text),\n ...tags && { tags: tags.map(highlight) },\n score: score * (1 + boost),\n terms\n })\n }\n return item\n }, [])\n\n /* Sort search results again after applying boosts */\n .sort((a, b) => b.score - a.score)\n\n /* Group search results by page */\n .reduce((items, result) => {\n const document = this.documents.get(result.location)\n if (typeof document !== \"undefined\") {\n const ref = \"parent\" in document\n ? document.parent!.location\n : document.location\n items.set(ref, [...items.get(ref) || [], result])\n }\n return items\n }, new Map())\n\n /* Generate search suggestions, if desired */\n let suggestions: string[] | undefined\n if (this.options.suggestions) {\n const titles = this.index.query(builder => {\n for (const clause of clauses)\n builder.term(clause.term, {\n fields: [\"title\"],\n presence: lunr.Query.presence.REQUIRED,\n wildcard: lunr.Query.wildcard.TRAILING\n })\n })\n\n /* Retrieve suggestions for best match */\n suggestions = titles.length\n ? Object.keys(titles[0].matchData.metadata)\n : []\n }\n\n /* Return items and suggestions */\n return {\n items: [...groups.values()],\n ...typeof suggestions !== \"undefined\" && { suggestions }\n }\n\n /* Log errors to console (for now) */\n } catch {\n console.warn(`Invalid query: ${query} \u2013 see https://bit.ly/2s3ChXG`)\n }\n }\n\n /* Return nothing in case of error or empty query */\n return { items: [] }\n }\n}\n"], - "mappings": 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\ No newline at end of file diff --git a/pr-preview/pr-10/causal_associations/index.html b/pr-preview/pr-10/causal_associations/index.html deleted file mode 100644 index 75e8cf8..0000000 --- a/pr-preview/pr-10/causal_associations/index.html +++ /dev/null @@ -1,421 +0,0 @@ - - - - - - - - - - - - - - - - - - Slot: causal_associations - gocam - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
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    Slot: causal_associations

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    The causal associations that connect this activity to other activities

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    URI: gocam:causal_associations

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    Applicable Classes

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    NameDescriptionModifies Slot
    ActivityAn individual activity in a causal model, representing the individual molecul...no
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    name: causal_associations
-description: The causal associations that connect this activity to other activities
-from_schema: https://w3id.org/gocam
-rank: 1000
-multivalued: true
-alias: causal_associations
-owner: Activity
-domain_of:
-- Activity
-range: CausalAssociation
-inlined: true
-inlined_as_list: true
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    Comments about the model

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    URI: rdfs:comment

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    ModelA model of a biological program consisting of a set of causally connected act...no
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-description: Comments about the model
-from_schema: https://w3id.org/gocam
-rank: 1000
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-alias: comments
-owner: Model
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-range: string
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    URI: dct:contributor

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    ProvenanceInfoProvenance information for an objectno
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    name: contributor
-from_schema: https://w3id.org/gocam
-rank: 1000
-slot_uri: dct:contributor
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-owner: ProvenanceInfo
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-range: string
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    URI: dct:created

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    NameDescriptionModifies Slot
    ProvenanceInfoProvenance information for an objectno
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-from_schema: https://w3id.org/gocam
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-- ProvenanceInfo
-range: string
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    NameDescriptionModifies Slot
    ProvenanceInfoProvenance information for an objectno
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    name: date
-from_schema: https://w3id.org/gocam
-rank: 1000
-slot_uri: dct:date
-alias: date
-owner: ProvenanceInfo
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-range: string
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    - - - - - - - - - - \ No newline at end of file diff --git a/pr-preview/pr-10/downstream_activity/index.html b/pr-preview/pr-10/downstream_activity/index.html deleted file mode 100644 index 45aa1eb..0000000 --- a/pr-preview/pr-10/downstream_activity/index.html +++ /dev/null @@ -1,426 +0,0 @@ - - - - - - - - - - - - - - - - - - Slot: downstream_activity - gocam - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
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    The activity unit that is downstream of this one

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    URI: gocam:downstream_activity

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    NameDescriptionModifies Slot
    CausalAssociationA causal association between two activitiesno
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    name: downstream_activity
-description: The activity unit that is downstream of this one
-from_schema: https://w3id.org/gocam
-aliases:
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-rank: 1000
-alias: downstream_activity
-owner: CausalAssociation
-domain_of:
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-range: Activity
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    The gene product or complex that carries out the activity

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    URI: gocam:enabled_by

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    NameDescriptionModifies Slot
    ActivityAn individual activity in a causal model, representing the individual molecul...no
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    name: enabled_by
-description: The gene product or complex that carries out the activity
-from_schema: https://w3id.org/gocam
-rank: 1000
-alias: enabled_by
-owner: Activity
-domain_of:
-- Activity
-range: EnabledByAssociation
-inlined: true
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    - - - - - - - - - - \ No newline at end of file diff --git a/pr-preview/pr-10/evidence/index.html b/pr-preview/pr-10/evidence/index.html deleted file mode 100644 index f229fa0..0000000 --- a/pr-preview/pr-10/evidence/index.html +++ /dev/null @@ -1,473 +0,0 @@ - - - - - - - - - - - - - - - - - - Slot: evidence - gocam - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
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    NameDescriptionModifies Slot
    EnabledByProteinComplexAssociationAn association between an activity and a protein complexno
    TermAssociationAn association between an activity and a term, potentially with extensionsno
    CellTypeAssociationAn association between an activity and a cell type termno
    CellularAnatomicalEntityAssociationAn association between an activity and a cellular anatomical entity termno
    EnabledByGeneProductAssociationAn association between an activity and a gene productno
    GrossAnatomyAssociationAn association between an activity and a gross anatomical structure termno
    EnabledByAssociationAn association between an activity and the gene product or complex that carri...no
    AssociationAn abstract grouping for different kinds of evidence-associated provenanceno
    BiologicalProcessAssociationAn association between an activity and a biological process termno
    MolecularFunctionAssociationAn association between an activity and a molecular function termno
    CausalAssociationA causal association between two activitiesno
    MoleculeAssociationAn association between an activity and a molecule termno
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    name: evidence
-from_schema: https://w3id.org/gocam
-rank: 1000
-multivalued: true
-alias: evidence
-owner: Association
-domain_of:
-- Association
-range: EvidenceItem
-inlined: true
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    - - - - - - - - - - \ No newline at end of file diff --git a/pr-preview/pr-10/full_text/index.html b/pr-preview/pr-10/full_text/index.html deleted file mode 100644 index 1f99346..0000000 --- a/pr-preview/pr-10/full_text/index.html +++ /dev/null @@ -1,411 +0,0 @@ - - - - - - - - - - - - - - - - - - Slot: full_text - gocam - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
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    Slot: full_text

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    URI: gocam:full_text

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    NameDescriptionModifies Slot
    PublicationObjectAn object that represents a publication or other kind of referenceno
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    name: full_text
-from_schema: https://w3id.org/gocam
-rank: 1000
-alias: full_text
-owner: PublicationObject
-domain_of:
-- PublicationObject
-range: string
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    - - - - - - - - - - \ No newline at end of file diff --git a/pr-preview/pr-10/gocam/index.html b/pr-preview/pr-10/gocam/index.html deleted file mode 100644 index a678711..0000000 --- a/pr-preview/pr-10/gocam/index.html +++ /dev/null @@ -1,322 +0,0 @@ - - - - - - - - - - - - - - - - - - gocam - gocam - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
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    gocam

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    GO CAM LinkML schema (experimental)

    -

    The central class in this datamodel is a Model. A model consists of a set of -Activity objects.

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    URI: https://w3id.org/gocam

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    Slot: has_direct_input

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    The input molecules that are directly consumed by the activity

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    URI: gocam:has_direct_input

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    Applicable Classes

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    NameDescriptionModifies Slot
    ActivityAn individual activity in a causal model, representing the individual molecul...no
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    name: has_direct_input
-description: The input molecules that are directly consumed by the activity
-from_schema: https://w3id.org/gocam
-rank: 1000
-alias: has_direct_input
-owner: Activity
-domain_of:
-- Activity
-range: MoleculeAssociation
-inlined: true
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    Slot: id

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    URI: gocam:id

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    Applicable Classes

    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
    NameDescriptionModifies Slot
    ObjectAn abstract class for all identified objects in a modelno
    EvidenceTermObjectA term object that represents an evidence term from ECOno
    CellTypeTermObjectA term object that represents a cell type term from CLno
    PhaseTermObjectA term object that represents a phase term from GO or UBERONno
    MolecularFunctionTermObjectA term object that represents a molecular function term from GOno
    InformationBiomacromoleculeTermObjectAn abstract class for all information biomacromolecule term objectsno
    GeneProductTermObjectA term object that represents a gene product term from GO or UniProtKBno
    ProteinComplexTermObjectA term object that represents a protein complex term from GOno
    TaxonTermObjectA term object that represents a taxon term from NCBITaxonno
    PredicateTermObjectA term object that represents a taxon term from NCBITaxonno
    ActivityAn individual activity in a causal model, representing the individual molecul...no
    ModelA model of a biological program consisting of a set of causally connected act...no
    PublicationObjectAn object that represents a publication or other kind of referenceno
    CellularAnatomicalEntityTermObjectA term object that represents a cellular anatomical entity term from GOno
    BiologicalProcessTermObjectA term object that represents a biological process term from GOno
    GrossAnatomicalStructureTermObjectA term object that represents a gross anatomical structure term from UBERONno
    MoleculeTermObjectA term object that represents a molecule term from CHEBI or UniProtKBno
    TermObjectAn abstract class for all ontology term objectsno
    -

    Properties

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    name: id
-alias: id
-domain_of:
-- Model
-- Activity
-- Object
-range: string
-
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    gocam

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    GO CAM LinkML schema (experimental)

    -

    The central class in this datamodel is a Model. A model consists of a set of -Activity objects.

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    URI: https://w3id.org/gocam

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    Name: gocam

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    Classes

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    ClassDescription
    ActivityAn individual activity in a causal model, representing the individual molecular activity of a single gene product or complex in the context of a particular model
    AssociationAn abstract grouping for different kinds of evidence-associated provenance
            CausalAssociationA causal association between two activities
            EnabledByAssociationAn association between an activity and the gene product or complex that carries it out
                    EnabledByGeneProductAssociationAn association between an activity and a gene product
                    EnabledByProteinComplexAssociationAn association between an activity and a protein complex
            TermAssociationAn association between an activity and a term, potentially with extensions
                    BiologicalProcessAssociationAn association between an activity and a biological process term
                    CellTypeAssociationAn association between an activity and a cell type term
                    CellularAnatomicalEntityAssociationAn association between an activity and a cellular anatomical entity term
                    GrossAnatomyAssociationAn association between an activity and a gross anatomical structure term
                    MolecularFunctionAssociationAn association between an activity and a molecular function term
                    MoleculeAssociationAn association between an activity and a molecule term
    EvidenceItemAn individual piece of evidence that is associated with an assertion in a model
    ModelA model of a biological program consisting of a set of causally connected activities
    ObjectAn abstract class for all identified objects in a model
            PublicationObjectAn object that represents a publication or other kind of reference
            TermObjectAn abstract class for all ontology term objects
                    BiologicalProcessTermObjectA term object that represents a biological process term from GO
                    CellTypeTermObjectA term object that represents a cell type term from CL
                    CellularAnatomicalEntityTermObjectA term object that represents a cellular anatomical entity term from GO
                    EvidenceTermObjectA term object that represents an evidence term from ECO
                    GrossAnatomicalStructureTermObjectA term object that represents a gross anatomical structure term from UBERON
                    InformationBiomacromoleculeTermObjectAn abstract class for all information biomacromolecule term objects
                            GeneProductTermObjectA term object that represents a gene product term from GO or UniProtKB
                            ProteinComplexTermObjectA term object that represents a protein complex term from GO
                    MolecularFunctionTermObjectA term object that represents a molecular function term from GO
                    MoleculeTermObjectA term object that represents a molecule term from CHEBI or UniProtKB
                    PhaseTermObjectA term object that represents a phase term from GO or UBERON
                    PredicateTermObjectA term object that represents a taxon term from NCBITaxon
                    TaxonTermObjectA term object that represents a taxon term from NCBITaxon
    ProvenanceInfoProvenance information for an object
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    activitiesAll of the activities that are part of the model
    causal_associationsThe causal associations that connect this activity to other activities
    commentsComments about the model
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    downstream_activityThe activity unit that is downstream of this one
    enabled_byThe gene product or complex that carries out the activity
    evidence
    full_text
    has_direct_inputThe input molecules that are directly consumed by the activity
    idThe identifier of the model
    label
    membersThe gene products that are part of the complex
    molecular_functionThe molecular function that is carried out by the gene product or complex
    objectsAll of the objects that are part of the model
    obsolete
    occurs_inThe cellular location in which the activity occurs
    part_ofThe larger biological process in which the activity is a part
    predicateThe RO relation that represents the type of relationship
    provenancesModel-level provenance information
    provided_by
    referenceThe publication of reference that describes the evidence
    statusThe status of the model
    taxonThe primary taxon that the model is about
    termThe ECO term representing the type of evidence
    titleThe human-readable descriptive title of the model
    type
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    BooleanA binary (true or false) value
    Curiea compact URI
    Datea date (year, month and day) in an idealized calendar
    DateOrDatetimeEither a date or a datetime
    DatetimeThe combination of a date and time
    DecimalA real number with arbitrary precision that conforms to the xsd:decimal speci...
    DoubleA real number that conforms to the xsd:double specification
    FloatA real number that conforms to the xsd:float specification
    IntegerAn integer
    JsonpathA string encoding a JSON Path
    JsonpointerA string encoding a JSON Pointer
    NcnamePrefix part of CURIE
    NodeidentifierA URI, CURIE or BNODE that represents a node in a model
    ObjectidentifierA URI or CURIE that represents an object in the model
    SparqlpathA string encoding a SPARQL Property Path
    StringA character string
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    Uria complete URI
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    EvidenceTermObjectA term object that represents an evidence term from ECOno
    ObjectAn abstract class for all identified objects in a modelno
    CellTypeTermObjectA term object that represents a cell type term from CLno
    PhaseTermObjectA term object that represents a phase term from GO or UBERONno
    MolecularFunctionTermObjectA term object that represents a molecular function term from GOno
    InformationBiomacromoleculeTermObjectAn abstract class for all information biomacromolecule term objectsno
    GeneProductTermObjectA term object that represents a gene product term from GO or UniProtKBno
    ProteinComplexTermObjectA term object that represents a protein complex term from GOno
    TaxonTermObjectA term object that represents a taxon term from NCBITaxonno
    PredicateTermObjectA term object that represents a taxon term from NCBITaxonno
    PublicationObjectAn object that represents a publication or other kind of referenceno
    CellularAnatomicalEntityTermObjectA term object that represents a cellular anatomical entity term from GOno
    BiologicalProcessTermObjectA term object that represents a biological process term from GOno
    GrossAnatomicalStructureTermObjectA term object that represents a gross anatomical structure term from UBERONno
    MoleculeTermObjectA term object that represents a molecule term from CHEBI or UniProtKBno
    TermObjectAn abstract class for all ontology term objectsno
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    EnabledByProteinComplexAssociationAn association between an activity and a protein complexno
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    ActivityAn individual activity in a causal model, representing the individual molecul...no
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    EvidenceTermObjectA term object that represents an evidence term from ECOno
    ObjectAn abstract class for all identified objects in a modelno
    CellTypeTermObjectA term object that represents a cell type term from CLno
    PhaseTermObjectA term object that represents a phase term from GO or UBERONno
    MolecularFunctionTermObjectA term object that represents a molecular function term from GOno
    InformationBiomacromoleculeTermObjectAn abstract class for all information biomacromolecule term objectsno
    GeneProductTermObjectA term object that represents a gene product term from GO or UniProtKBno
    ProteinComplexTermObjectA term object that represents a protein complex term from GOno
    TaxonTermObjectA term object that represents a taxon term from NCBITaxonno
    PredicateTermObjectA term object that represents a taxon term from NCBITaxonno
    PublicationObjectAn object that represents a publication or other kind of referenceno
    CellularAnatomicalEntityTermObjectA term object that represents a cellular anatomical entity term from GOno
    BiologicalProcessTermObjectA term object that represents a biological process term from GOno
    GrossAnatomicalStructureTermObjectA term object that represents a gross anatomical structure term from UBERONno
    MoleculeTermObjectA term object that represents a molecule term from CHEBI or UniProtKBno
    TermObjectAn abstract class for all ontology term objectsno
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    EnabledByProteinComplexAssociationAn association between an activity and a protein complexno
    TermAssociationAn association between an activity and a term, potentially with extensionsno
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    CellTypeAssociationAn association between an activity and a cell type termno
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    EnabledByGeneProductAssociationAn association between an activity and a gene productno
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    ActivityAn individual activity in a causal model, representing the individual molecul...no
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    AssociationAn abstract grouping for different kinds of evidence-associated provenanceno
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    NameDescriptionModifies Slot
    ProvenanceInfoProvenance information for an objectno
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    name: provided_by
-from_schema: https://w3id.org/gocam
-rank: 1000
-slot_uri: pav:providedBy
-alias: provided_by
-owner: ProvenanceInfo
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-- ProvenanceInfo
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    EvidenceItemAn individual piece of evidence that is associated with an assertion in a mod...no
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    name: reference
-description: The publication of reference that describes the evidence
-from_schema: https://w3id.org/gocam
-rank: 1000
-alias: reference
-owner: EvidenceItem
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-- EvidenceItem
-range: PublicationObject
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    - - - - - - - - - - \ No newline at end of file diff --git a/pr-preview/pr-10/search/search_index.json b/pr-preview/pr-10/search/search_index.json deleted file mode 100644 index d7a5717..0000000 --- a/pr-preview/pr-10/search/search_index.json +++ /dev/null @@ -1 +0,0 @@ -{"config":{"indexing":"full","lang":["en"],"min_search_length":3,"prebuild_index":false,"separator":"[\\s\\-]+"},"docs":[{"location":"","text":"gocam GO CAM LinkML schema (experimental) The central class in this datamodel is a Model . A model consists of a set of Activity objects. URI: https://w3id.org/gocam Name: gocam Classes Class Description Activity An individual activity in a causal model, representing the individual molecular activity of a single gene product or complex in the context of a particular model Association An abstract grouping for different kinds of evidence-associated provenance CausalAssociation A causal association between two activities EnabledByAssociation An association between an activity and the gene product or complex that carries it out EnabledByGeneProductAssociation An association between an activity and a gene product EnabledByProteinComplexAssociation An association between an activity and a protein complex TermAssociation An association between an activity and a term, potentially with extensions BiologicalProcessAssociation An association between an activity and a biological process term CellTypeAssociation An association between an activity and a cell type term CellularAnatomicalEntityAssociation An association between an activity and a cellular anatomical entity term GrossAnatomyAssociation An association between an activity and a gross anatomical structure term MolecularFunctionAssociation An association between an activity and a molecular function term MoleculeAssociation An association between an activity and a molecule term EvidenceItem An individual piece of evidence that is associated with an assertion in a model Model A model of a biological program consisting of a set of causally connected activities Object An abstract class for all identified objects in a model PublicationObject An object that represents a publication or other kind of reference TermObject An abstract class for all ontology term objects BiologicalProcessTermObject A term object that represents a biological process term from GO CellTypeTermObject A term object that represents a cell type term from CL CellularAnatomicalEntityTermObject A term object that represents a cellular anatomical entity term from GO EvidenceTermObject A term object that represents an evidence term from ECO GrossAnatomicalStructureTermObject A term object that represents a gross anatomical structure term from UBERON InformationBiomacromoleculeTermObject An abstract class for all information biomacromolecule term objects GeneProductTermObject A term object that represents a gene product term from GO or UniProtKB ProteinComplexTermObject A term object that represents a protein complex term from GO MolecularFunctionTermObject A term object that represents a molecular function term from GO MoleculeTermObject A term object that represents a molecule term from CHEBI or UniProtKB PhaseTermObject A term object that represents a phase term from GO or UBERON PredicateTermObject A term object that represents a taxon term from NCBITaxon TaxonTermObject A term object that represents a taxon term from NCBITaxon ProvenanceInfo Provenance information for an object Slots Slot Description abstract_text activities All of the activities that are part of the model causal_associations The causal associations that connect this activity to other activities comments Comments about the model contributor created date downstream_activity The activity unit that is downstream of this one enabled_by The gene product or complex that carries out the activity evidence full_text has_direct_input The input molecules that are directly consumed by the activity id The identifier of the model label members The gene products that are part of the complex molecular_function The molecular function that is carried out by the gene product or complex objects All of the objects that are part of the model obsolete occurs_in The cellular location in which the activity occurs part_of The larger biological process in which the activity is a part predicate The RO relation that represents the type of relationship provenances Model-level provenance information provided_by reference The publication of reference that describes the evidence status The status of the model taxon The primary taxon that the model is about term The ECO term representing the type of evidence title The human-readable descriptive title of the model type with_objects Supporting database entities or terms Enumerations Enumeration Description CausalPredicateEnum InformationBiomacromoleculeCategory ModelStateEnum Status of a model Types Type Description Boolean A binary (true or false) value Curie a compact URI Date a date (year, month and day) in an idealized calendar DateOrDatetime Either a date or a datetime Datetime The combination of a date and time Decimal A real number with arbitrary precision that conforms to the xsd:decimal speci... Double A real number that conforms to the xsd:double specification Float A real number that conforms to the xsd:float specification Integer An integer Jsonpath A string encoding a JSON Path Jsonpointer A string encoding a JSON Pointer Ncname Prefix part of CURIE Nodeidentifier A URI, CURIE or BNODE that represents a node in a model Objectidentifier A URI or CURIE that represents an object in the model Sparqlpath A string encoding a SPARQL Property Path String A character string Time A time object represents a (local) time of day, independent of any particular... Uri a complete URI Uriorcurie a URI or a CURIE Subsets Subset Description","title":"Index"},{"location":"#gocam","text":"GO CAM LinkML schema (experimental) The central class in this datamodel is a Model . A model consists of a set of Activity objects. URI: https://w3id.org/gocam Name: gocam","title":"gocam"},{"location":"#classes","text":"Class Description Activity An individual activity in a causal model, representing the individual molecular activity of a single gene product or complex in the context of a particular model Association An abstract grouping for different kinds of evidence-associated provenance CausalAssociation A causal association between two activities EnabledByAssociation An association between an activity and the gene product or complex that carries it out EnabledByGeneProductAssociation An association between an activity and a gene product EnabledByProteinComplexAssociation An association between an activity and a protein complex TermAssociation An association between an activity and a term, potentially with extensions BiologicalProcessAssociation An association between an activity and a biological process term CellTypeAssociation An association between an activity and a cell type term CellularAnatomicalEntityAssociation An association between an activity and a cellular anatomical entity term GrossAnatomyAssociation An association between an activity and a gross anatomical structure term MolecularFunctionAssociation An association between an activity and a molecular function term MoleculeAssociation An association between an activity and a molecule term EvidenceItem An individual piece of evidence that is associated with an assertion in a model Model A model of a biological program consisting of a set of causally connected activities Object An abstract class for all identified objects in a model PublicationObject An object that represents a publication or other kind of reference TermObject An abstract class for all ontology term objects BiologicalProcessTermObject A term object that represents a biological process term from GO CellTypeTermObject A term object that represents a cell type term from CL CellularAnatomicalEntityTermObject A term object that represents a cellular anatomical entity term from GO EvidenceTermObject A term object that represents an evidence term from ECO GrossAnatomicalStructureTermObject A term object that represents a gross anatomical structure term from UBERON InformationBiomacromoleculeTermObject An abstract class for all information biomacromolecule term objects GeneProductTermObject A term object that represents a gene product term from GO or UniProtKB ProteinComplexTermObject A term object that represents a protein complex term from GO MolecularFunctionTermObject A term object that represents a molecular function term from GO MoleculeTermObject A term object that represents a molecule term from CHEBI or UniProtKB PhaseTermObject A term object that represents a phase term from GO or UBERON PredicateTermObject A term object that represents a taxon term from NCBITaxon TaxonTermObject A term object that represents a taxon term from NCBITaxon ProvenanceInfo Provenance information for an object","title":"Classes"},{"location":"#slots","text":"Slot Description abstract_text activities All of the activities that are part of the model causal_associations The causal associations that connect this activity to other activities comments Comments about the model contributor created date downstream_activity The activity unit that is downstream of this one enabled_by The gene product or complex that carries out the activity evidence full_text has_direct_input The input molecules that are directly consumed by the activity id The identifier of the model label members The gene products that are part of the complex molecular_function The molecular function that is carried out by the gene product or complex objects All of the objects that are part of the model obsolete occurs_in The cellular location in which the activity occurs part_of The larger biological process in which the activity is a part predicate The RO relation that represents the type of relationship provenances Model-level provenance information provided_by reference The publication of reference that describes the evidence status The status of the model taxon The primary taxon that the model is about term The ECO term representing the type of evidence title The human-readable descriptive title of the model type with_objects Supporting database entities or terms","title":"Slots"},{"location":"#enumerations","text":"Enumeration Description CausalPredicateEnum InformationBiomacromoleculeCategory ModelStateEnum Status of a model","title":"Enumerations"},{"location":"#types","text":"Type Description Boolean A binary (true or false) value Curie a compact URI Date a date (year, month and day) in an idealized calendar DateOrDatetime Either a date or a datetime Datetime The combination of a date and time Decimal A real number with arbitrary precision that conforms to the xsd:decimal speci... Double A real number that conforms to the xsd:double specification Float A real number that conforms to the xsd:float specification Integer An integer Jsonpath A string encoding a JSON Path Jsonpointer A string encoding a JSON Pointer Ncname Prefix part of CURIE Nodeidentifier A URI, CURIE or BNODE that represents a node in a model Objectidentifier A URI or CURIE that represents an object in the model Sparqlpath A string encoding a SPARQL Property Path String A character string Time A time object represents a (local) time of day, independent of any particular... Uri a complete URI Uriorcurie a URI or a CURIE","title":"Types"},{"location":"#subsets","text":"Subset Description","title":"Subsets"},{"location":"Activity/","text":"Class: Activity An individual activity in a causal model, representing the individual molecular activity of a single gene product or complex in the context of a particular model URI: gocam:Activity classDiagram class Activity click Activity href \"../Activity\" Activity : causal_associations Activity --> \"*\" CausalAssociation : causal_associations click CausalAssociation href \"../CausalAssociation\" Activity : enabled_by Activity --> \"0..1\" EnabledByAssociation : enabled_by click EnabledByAssociation href \"../EnabledByAssociation\" Activity : has_direct_input Activity --> \"0..1\" MoleculeAssociation : has_direct_input click MoleculeAssociation href \"../MoleculeAssociation\" Activity : id Activity : molecular_function Activity --> \"0..1\" MolecularFunctionAssociation : molecular_function click MolecularFunctionAssociation href \"../MolecularFunctionAssociation\" Activity : occurs_in Activity --> \"0..1\" CellularAnatomicalEntityAssociation : occurs_in click CellularAnatomicalEntityAssociation href \"../CellularAnatomicalEntityAssociation\" Activity : part_of Activity --> \"0..1\" BiologicalProcessAssociation : part_of click BiologicalProcessAssociation href \"../BiologicalProcessAssociation\" Activity : provenances Activity --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" Slots Name Cardinality and Range Description Inheritance id 1 Uriorcurie Identifier of the activity unit direct enabled_by 0..1 EnabledByAssociation The gene product or complex that carries out the activity direct molecular_function 0..1 MolecularFunctionAssociation The molecular function that is carried out by the gene product or complex direct occurs_in 0..1 CellularAnatomicalEntityAssociation The cellular location in which the activity occurs direct part_of 0..1 BiologicalProcessAssociation The larger biological process in which the activity is a part direct has_direct_input 0..1 MoleculeAssociation The input molecules that are directly consumed by the activity direct causal_associations * CausalAssociation The causal associations that connect this activity to other activities direct provenances * ProvenanceInfo Provenance information for the activity direct Usages used by used in type used Model activities range Activity CausalAssociation downstream_activity range Activity Aliases annoton Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:Activity native gocam:Activity LinkML Source Direct name: Activity description: An individual activity in a causal model, representing the individual molecular activity of a single gene product or complex in the context of a particular model from_schema: https://w3id.org/gocam aliases: - annoton attributes: id: name: id description: Identifier of the activity unit. Should be in gocam namespace. comments: - Typically does not need to be exposed to end-user, this exists to allow activity flows from_schema: https://w3id.org/gocam identifier: true domain_of: - Model - Activity - Object range: uriorcurie required: true enabled_by: name: enabled_by description: The gene product or complex that carries out the activity from_schema: https://w3id.org/gocam rank: 1000 domain_of: - Activity range: EnabledByAssociation inlined: true molecular_function: name: molecular_function description: The molecular function that is carried out by the gene product or complex todos: - currently BP, CC etc are at the level of the activity, not the MolecularFunctionAssociation from_schema: https://w3id.org/gocam rank: 1000 domain_of: - Activity range: MolecularFunctionAssociation inlined: true occurs_in: name: occurs_in description: The cellular location in which the activity occurs from_schema: https://w3id.org/gocam rank: 1000 domain_of: - Activity range: CellularAnatomicalEntityAssociation inlined: true part_of: name: part_of description: The larger biological process in which the activity is a part from_schema: https://w3id.org/gocam rank: 1000 domain_of: - Activity range: BiologicalProcessAssociation inlined: true has_direct_input: name: has_direct_input description: The input molecules that are directly consumed by the activity from_schema: https://w3id.org/gocam rank: 1000 domain_of: - Activity range: MoleculeAssociation inlined: true causal_associations: name: causal_associations description: The causal associations that connect this activity to other activities from_schema: https://w3id.org/gocam rank: 1000 multivalued: true domain_of: - Activity range: CausalAssociation inlined: true inlined_as_list: true provenances: name: provenances description: Provenance information for the activity from_schema: https://w3id.org/gocam multivalued: true domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true Induced name: Activity description: An individual activity in a causal model, representing the individual molecular activity of a single gene product or complex in the context of a particular model from_schema: https://w3id.org/gocam aliases: - annoton attributes: id: name: id description: Identifier of the activity unit. Should be in gocam namespace. comments: - Typically does not need to be exposed to end-user, this exists to allow activity flows from_schema: https://w3id.org/gocam identifier: true alias: id owner: Activity domain_of: - Model - Activity - Object range: uriorcurie required: true enabled_by: name: enabled_by description: The gene product or complex that carries out the activity from_schema: https://w3id.org/gocam rank: 1000 alias: enabled_by owner: Activity domain_of: - Activity range: EnabledByAssociation inlined: true molecular_function: name: molecular_function description: The molecular function that is carried out by the gene product or complex todos: - currently BP, CC etc are at the level of the activity, not the MolecularFunctionAssociation from_schema: https://w3id.org/gocam rank: 1000 alias: molecular_function owner: Activity domain_of: - Activity range: MolecularFunctionAssociation inlined: true occurs_in: name: occurs_in description: The cellular location in which the activity occurs from_schema: https://w3id.org/gocam rank: 1000 alias: occurs_in owner: Activity domain_of: - Activity range: CellularAnatomicalEntityAssociation inlined: true part_of: name: part_of description: The larger biological process in which the activity is a part from_schema: https://w3id.org/gocam rank: 1000 alias: part_of owner: Activity domain_of: - Activity range: BiologicalProcessAssociation inlined: true has_direct_input: name: has_direct_input description: The input molecules that are directly consumed by the activity from_schema: https://w3id.org/gocam rank: 1000 alias: has_direct_input owner: Activity domain_of: - Activity range: MoleculeAssociation inlined: true causal_associations: name: causal_associations description: The causal associations that connect this activity to other activities from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: causal_associations owner: Activity domain_of: - Activity range: CausalAssociation inlined: true inlined_as_list: true provenances: name: provenances description: Provenance information for the activity from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: Activity domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Class: Activity"},{"location":"Activity/#class-activity","text":"An individual activity in a causal model, representing the individual molecular activity of a single gene product or complex in the context of a particular model URI: gocam:Activity classDiagram class Activity click Activity href \"../Activity\" Activity : causal_associations Activity --> \"*\" CausalAssociation : causal_associations click CausalAssociation href \"../CausalAssociation\" Activity : enabled_by Activity --> \"0..1\" EnabledByAssociation : enabled_by click EnabledByAssociation href \"../EnabledByAssociation\" Activity : has_direct_input Activity --> \"0..1\" MoleculeAssociation : has_direct_input click MoleculeAssociation href \"../MoleculeAssociation\" Activity : id Activity : molecular_function Activity --> \"0..1\" MolecularFunctionAssociation : molecular_function click MolecularFunctionAssociation href \"../MolecularFunctionAssociation\" Activity : occurs_in Activity --> \"0..1\" CellularAnatomicalEntityAssociation : occurs_in click CellularAnatomicalEntityAssociation href \"../CellularAnatomicalEntityAssociation\" Activity : part_of Activity --> \"0..1\" BiologicalProcessAssociation : part_of click BiologicalProcessAssociation href \"../BiologicalProcessAssociation\" Activity : provenances Activity --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\"","title":"Class: Activity"},{"location":"Activity/#slots","text":"Name Cardinality and Range Description Inheritance id 1 Uriorcurie Identifier of the activity unit direct enabled_by 0..1 EnabledByAssociation The gene product or complex that carries out the activity direct molecular_function 0..1 MolecularFunctionAssociation The molecular function that is carried out by the gene product or complex direct occurs_in 0..1 CellularAnatomicalEntityAssociation The cellular location in which the activity occurs direct part_of 0..1 BiologicalProcessAssociation The larger biological process in which the activity is a part direct has_direct_input 0..1 MoleculeAssociation The input molecules that are directly consumed by the activity direct causal_associations * CausalAssociation The causal associations that connect this activity to other activities direct provenances * ProvenanceInfo Provenance information for the activity direct","title":"Slots"},{"location":"Activity/#usages","text":"used by used in type used Model activities range Activity CausalAssociation downstream_activity range Activity","title":"Usages"},{"location":"Activity/#aliases","text":"annoton","title":"Aliases"},{"location":"Activity/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Activity/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"Activity/#mappings","text":"Mapping Type Mapped Value self gocam:Activity native gocam:Activity","title":"Mappings"},{"location":"Activity/#linkml-source","text":"","title":"LinkML Source"},{"location":"Activity/#direct","text":"name: Activity description: An individual activity in a causal model, representing the individual molecular activity of a single gene product or complex in the context of a particular model from_schema: https://w3id.org/gocam aliases: - annoton attributes: id: name: id description: Identifier of the activity unit. Should be in gocam namespace. comments: - Typically does not need to be exposed to end-user, this exists to allow activity flows from_schema: https://w3id.org/gocam identifier: true domain_of: - Model - Activity - Object range: uriorcurie required: true enabled_by: name: enabled_by description: The gene product or complex that carries out the activity from_schema: https://w3id.org/gocam rank: 1000 domain_of: - Activity range: EnabledByAssociation inlined: true molecular_function: name: molecular_function description: The molecular function that is carried out by the gene product or complex todos: - currently BP, CC etc are at the level of the activity, not the MolecularFunctionAssociation from_schema: https://w3id.org/gocam rank: 1000 domain_of: - Activity range: MolecularFunctionAssociation inlined: true occurs_in: name: occurs_in description: The cellular location in which the activity occurs from_schema: https://w3id.org/gocam rank: 1000 domain_of: - Activity range: CellularAnatomicalEntityAssociation inlined: true part_of: name: part_of description: The larger biological process in which the activity is a part from_schema: https://w3id.org/gocam rank: 1000 domain_of: - Activity range: BiologicalProcessAssociation inlined: true has_direct_input: name: has_direct_input description: The input molecules that are directly consumed by the activity from_schema: https://w3id.org/gocam rank: 1000 domain_of: - Activity range: MoleculeAssociation inlined: true causal_associations: name: causal_associations description: The causal associations that connect this activity to other activities from_schema: https://w3id.org/gocam rank: 1000 multivalued: true domain_of: - Activity range: CausalAssociation inlined: true inlined_as_list: true provenances: name: provenances description: Provenance information for the activity from_schema: https://w3id.org/gocam multivalued: true domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Direct"},{"location":"Activity/#induced","text":"name: Activity description: An individual activity in a causal model, representing the individual molecular activity of a single gene product or complex in the context of a particular model from_schema: https://w3id.org/gocam aliases: - annoton attributes: id: name: id description: Identifier of the activity unit. Should be in gocam namespace. comments: - Typically does not need to be exposed to end-user, this exists to allow activity flows from_schema: https://w3id.org/gocam identifier: true alias: id owner: Activity domain_of: - Model - Activity - Object range: uriorcurie required: true enabled_by: name: enabled_by description: The gene product or complex that carries out the activity from_schema: https://w3id.org/gocam rank: 1000 alias: enabled_by owner: Activity domain_of: - Activity range: EnabledByAssociation inlined: true molecular_function: name: molecular_function description: The molecular function that is carried out by the gene product or complex todos: - currently BP, CC etc are at the level of the activity, not the MolecularFunctionAssociation from_schema: https://w3id.org/gocam rank: 1000 alias: molecular_function owner: Activity domain_of: - Activity range: MolecularFunctionAssociation inlined: true occurs_in: name: occurs_in description: The cellular location in which the activity occurs from_schema: https://w3id.org/gocam rank: 1000 alias: occurs_in owner: Activity domain_of: - Activity range: CellularAnatomicalEntityAssociation inlined: true part_of: name: part_of description: The larger biological process in which the activity is a part from_schema: https://w3id.org/gocam rank: 1000 alias: part_of owner: Activity domain_of: - Activity range: BiologicalProcessAssociation inlined: true has_direct_input: name: has_direct_input description: The input molecules that are directly consumed by the activity from_schema: https://w3id.org/gocam rank: 1000 alias: has_direct_input owner: Activity domain_of: - Activity range: MoleculeAssociation inlined: true causal_associations: name: causal_associations description: The causal associations that connect this activity to other activities from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: causal_associations owner: Activity domain_of: - Activity range: CausalAssociation inlined: true inlined_as_list: true provenances: name: provenances description: Provenance information for the activity from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: Activity domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Induced"},{"location":"Association/","text":"Class: Association An abstract grouping for different kinds of evidence-associated provenance NOTE : this is an abstract class and should not be instantiated directly URI: gocam:Association classDiagram class Association click Association href \"../Association\" Association <|-- EnabledByAssociation click EnabledByAssociation href \"../EnabledByAssociation\" Association <|-- CausalAssociation click CausalAssociation href \"../CausalAssociation\" Association <|-- TermAssociation click TermAssociation href \"../TermAssociation\" Association : evidence Association --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" Association : provenances Association --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" Association : type Inheritance Association EnabledByAssociation CausalAssociation TermAssociation Slots Name Cardinality and Range Description Inheritance type 0..1 String direct evidence * EvidenceItem direct provenances * ProvenanceInfo direct Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:Association native gocam:Association LinkML Source Direct name: Association description: An abstract grouping for different kinds of evidence-associated provenance from_schema: https://w3id.org/gocam abstract: true attributes: type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true domain_of: - Association - Object evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true Induced name: Association description: An abstract grouping for different kinds of evidence-associated provenance from_schema: https://w3id.org/gocam abstract: true attributes: type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: Association domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: Association domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: Association domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Class: Association"},{"location":"Association/#class-association","text":"An abstract grouping for different kinds of evidence-associated provenance NOTE : this is an abstract class and should not be instantiated directly URI: gocam:Association classDiagram class Association click Association href \"../Association\" Association <|-- EnabledByAssociation click EnabledByAssociation href \"../EnabledByAssociation\" Association <|-- CausalAssociation click CausalAssociation href \"../CausalAssociation\" Association <|-- TermAssociation click TermAssociation href \"../TermAssociation\" Association : evidence Association --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" Association : provenances Association --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" Association : type","title":"Class: Association"},{"location":"Association/#inheritance","text":"Association EnabledByAssociation CausalAssociation TermAssociation","title":"Inheritance"},{"location":"Association/#slots","text":"Name Cardinality and Range Description Inheritance type 0..1 String direct evidence * EvidenceItem direct provenances * ProvenanceInfo direct","title":"Slots"},{"location":"Association/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Association/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"Association/#mappings","text":"Mapping Type Mapped Value self gocam:Association native gocam:Association","title":"Mappings"},{"location":"Association/#linkml-source","text":"","title":"LinkML Source"},{"location":"Association/#direct","text":"name: Association description: An abstract grouping for different kinds of evidence-associated provenance from_schema: https://w3id.org/gocam abstract: true attributes: type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true domain_of: - Association - Object evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Direct"},{"location":"Association/#induced","text":"name: Association description: An abstract grouping for different kinds of evidence-associated provenance from_schema: https://w3id.org/gocam abstract: true attributes: type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: Association domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: Association domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: Association domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Induced"},{"location":"BiologicalProcessAssociation/","text":"Class: BiologicalProcessAssociation An association between an activity and a biological process term URI: gocam:BiologicalProcessAssociation classDiagram class BiologicalProcessAssociation click BiologicalProcessAssociation href \"../BiologicalProcessAssociation\" TermAssociation <|-- BiologicalProcessAssociation click TermAssociation href \"../TermAssociation\" BiologicalProcessAssociation : evidence BiologicalProcessAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" BiologicalProcessAssociation : provenances BiologicalProcessAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" BiologicalProcessAssociation : term BiologicalProcessAssociation --> \"0..1\" BiologicalProcessTermObject : term click BiologicalProcessTermObject href \"../BiologicalProcessTermObject\" BiologicalProcessAssociation : type Inheritance Association TermAssociation BiologicalProcessAssociation Slots Name Cardinality and Range Description Inheritance term 0..1 BiologicalProcessTermObject The ontology term that describes the nature of the association TermAssociation type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association Usages used by used in type used Activity part_of range BiologicalProcessAssociation Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:BiologicalProcessAssociation native gocam:BiologicalProcessAssociation LinkML Source Direct name: BiologicalProcessAssociation description: An association between an activity and a biological process term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: BiologicalProcessTermObject happens_during: name: happens_during description: Optional extension describing where the BP takes place range: PhaseTermObject part_of: name: part_of description: Optional extension allowing hierarchical nesting of BPs range: BiologicalProcessTermObject Induced name: BiologicalProcessAssociation description: An association between an activity and a biological process term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: BiologicalProcessTermObject happens_during: name: happens_during description: Optional extension describing where the BP takes place range: PhaseTermObject part_of: name: part_of description: Optional extension allowing hierarchical nesting of BPs range: BiologicalProcessTermObject attributes: term: name: term description: The ontology term that describes the nature of the association from_schema: https://w3id.org/gocam alias: term owner: BiologicalProcessAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: BiologicalProcessTermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: BiologicalProcessAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: BiologicalProcessAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: BiologicalProcessAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Class: BiologicalProcessAssociation"},{"location":"BiologicalProcessAssociation/#class-biologicalprocessassociation","text":"An association between an activity and a biological process term URI: gocam:BiologicalProcessAssociation classDiagram class BiologicalProcessAssociation click BiologicalProcessAssociation href \"../BiologicalProcessAssociation\" TermAssociation <|-- BiologicalProcessAssociation click TermAssociation href \"../TermAssociation\" BiologicalProcessAssociation : evidence BiologicalProcessAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" BiologicalProcessAssociation : provenances BiologicalProcessAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" BiologicalProcessAssociation : term BiologicalProcessAssociation --> \"0..1\" BiologicalProcessTermObject : term click BiologicalProcessTermObject href \"../BiologicalProcessTermObject\" BiologicalProcessAssociation : type","title":"Class: BiologicalProcessAssociation"},{"location":"BiologicalProcessAssociation/#inheritance","text":"Association TermAssociation BiologicalProcessAssociation","title":"Inheritance"},{"location":"BiologicalProcessAssociation/#slots","text":"Name Cardinality and Range Description Inheritance term 0..1 BiologicalProcessTermObject The ontology term that describes the nature of the association TermAssociation type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association","title":"Slots"},{"location":"BiologicalProcessAssociation/#usages","text":"used by used in type used Activity part_of range BiologicalProcessAssociation","title":"Usages"},{"location":"BiologicalProcessAssociation/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"BiologicalProcessAssociation/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"BiologicalProcessAssociation/#mappings","text":"Mapping Type Mapped Value self gocam:BiologicalProcessAssociation native gocam:BiologicalProcessAssociation","title":"Mappings"},{"location":"BiologicalProcessAssociation/#linkml-source","text":"","title":"LinkML Source"},{"location":"BiologicalProcessAssociation/#direct","text":"name: BiologicalProcessAssociation description: An association between an activity and a biological process term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: BiologicalProcessTermObject happens_during: name: happens_during description: Optional extension describing where the BP takes place range: PhaseTermObject part_of: name: part_of description: Optional extension allowing hierarchical nesting of BPs range: BiologicalProcessTermObject","title":"Direct"},{"location":"BiologicalProcessAssociation/#induced","text":"name: BiologicalProcessAssociation description: An association between an activity and a biological process term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: BiologicalProcessTermObject happens_during: name: happens_during description: Optional extension describing where the BP takes place range: PhaseTermObject part_of: name: part_of description: Optional extension allowing hierarchical nesting of BPs range: BiologicalProcessTermObject attributes: term: name: term description: The ontology term that describes the nature of the association from_schema: https://w3id.org/gocam alias: term owner: BiologicalProcessAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: BiologicalProcessTermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: BiologicalProcessAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: BiologicalProcessAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: BiologicalProcessAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Induced"},{"location":"BiologicalProcessTermObject/","text":"Class: BiologicalProcessTermObject A term object that represents a biological process term from GO URI: gocam:BiologicalProcessTermObject classDiagram class BiologicalProcessTermObject click BiologicalProcessTermObject href \"../BiologicalProcessTermObject\" TermObject <|-- BiologicalProcessTermObject click TermObject href \"../TermObject\" BiologicalProcessTermObject : id BiologicalProcessTermObject : label BiologicalProcessTermObject : obsolete BiologicalProcessTermObject : type Inheritance Object TermObject BiologicalProcessTermObject Slots Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object Usages used by used in type used BiologicalProcessAssociation term range BiologicalProcessTermObject Identifier and Mapping Information Valid ID Prefixes Instances of this class should have identifiers with one of the following prefixes: GO Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:BiologicalProcessTermObject native gocam:BiologicalProcessTermObject LinkML Source Direct name: BiologicalProcessTermObject id_prefixes: - GO description: A term object that represents a biological process term from GO from_schema: https://w3id.org/gocam is_a: TermObject Induced name: BiologicalProcessTermObject id_prefixes: - GO description: A term object that represents a biological process term from GO from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: BiologicalProcessTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: BiologicalProcessTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: BiologicalProcessTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: BiologicalProcessTermObject domain_of: - Object range: boolean","title":"Class: BiologicalProcessTermObject"},{"location":"BiologicalProcessTermObject/#class-biologicalprocesstermobject","text":"A term object that represents a biological process term from GO URI: gocam:BiologicalProcessTermObject classDiagram class BiologicalProcessTermObject click BiologicalProcessTermObject href \"../BiologicalProcessTermObject\" TermObject <|-- BiologicalProcessTermObject click TermObject href \"../TermObject\" BiologicalProcessTermObject : id BiologicalProcessTermObject : label BiologicalProcessTermObject : obsolete BiologicalProcessTermObject : type","title":"Class: BiologicalProcessTermObject"},{"location":"BiologicalProcessTermObject/#inheritance","text":"Object TermObject BiologicalProcessTermObject","title":"Inheritance"},{"location":"BiologicalProcessTermObject/#slots","text":"Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object","title":"Slots"},{"location":"BiologicalProcessTermObject/#usages","text":"used by used in type used BiologicalProcessAssociation term range BiologicalProcessTermObject","title":"Usages"},{"location":"BiologicalProcessTermObject/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"BiologicalProcessTermObject/#valid-id-prefixes","text":"Instances of this class should have identifiers with one of the following prefixes: GO","title":"Valid ID Prefixes"},{"location":"BiologicalProcessTermObject/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"BiologicalProcessTermObject/#mappings","text":"Mapping Type Mapped Value self gocam:BiologicalProcessTermObject native gocam:BiologicalProcessTermObject","title":"Mappings"},{"location":"BiologicalProcessTermObject/#linkml-source","text":"","title":"LinkML Source"},{"location":"BiologicalProcessTermObject/#direct","text":"name: BiologicalProcessTermObject id_prefixes: - GO description: A term object that represents a biological process term from GO from_schema: https://w3id.org/gocam is_a: TermObject","title":"Direct"},{"location":"BiologicalProcessTermObject/#induced","text":"name: BiologicalProcessTermObject id_prefixes: - GO description: A term object that represents a biological process term from GO from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: BiologicalProcessTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: BiologicalProcessTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: BiologicalProcessTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: BiologicalProcessTermObject domain_of: - Object range: boolean","title":"Induced"},{"location":"Boolean/","text":"Type: Boolean A binary (true or false) value URI: xsd:boolean base : Bool uri : xsd:boolean repr : bool Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam","title":"Type: Boolean"},{"location":"Boolean/#type-boolean","text":"A binary (true or false) value URI: xsd:boolean base : Bool uri : xsd:boolean repr : bool","title":"Type: Boolean"},{"location":"Boolean/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Boolean/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"CausalAssociation/","text":"Class: CausalAssociation A causal association between two activities URI: gocam:CausalAssociation classDiagram class CausalAssociation click CausalAssociation href \"../CausalAssociation\" Association <|-- CausalAssociation click Association href \"../Association\" CausalAssociation : downstream_activity CausalAssociation --> \"0..1\" Activity : downstream_activity click Activity href \"../Activity\" CausalAssociation : evidence CausalAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" CausalAssociation : predicate CausalAssociation --> \"0..1\" PredicateTermObject : predicate click PredicateTermObject href \"../PredicateTermObject\" CausalAssociation : provenances CausalAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" CausalAssociation : type Inheritance Association CausalAssociation Slots Name Cardinality and Range Description Inheritance predicate 0..1 PredicateTermObject The RO relation that represents the type of relationship direct downstream_activity 0..1 Activity The activity unit that is downstream of this one direct type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association Usages used by used in type used Activity causal_associations range CausalAssociation Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:CausalAssociation native gocam:CausalAssociation LinkML Source Direct name: CausalAssociation description: A causal association between two activities from_schema: https://w3id.org/gocam is_a: Association attributes: predicate: name: predicate description: The RO relation that represents the type of relationship from_schema: https://w3id.org/gocam rank: 1000 domain_of: - CausalAssociation range: PredicateTermObject downstream_activity: name: downstream_activity description: The activity unit that is downstream of this one from_schema: https://w3id.org/gocam aliases: - object rank: 1000 domain_of: - CausalAssociation range: Activity Induced name: CausalAssociation description: A causal association between two activities from_schema: https://w3id.org/gocam is_a: Association attributes: predicate: name: predicate description: The RO relation that represents the type of relationship from_schema: https://w3id.org/gocam rank: 1000 alias: predicate owner: CausalAssociation domain_of: - CausalAssociation range: PredicateTermObject downstream_activity: name: downstream_activity description: The activity unit that is downstream of this one from_schema: https://w3id.org/gocam aliases: - object rank: 1000 alias: downstream_activity owner: CausalAssociation domain_of: - CausalAssociation range: Activity type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: CausalAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: CausalAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: CausalAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Class: CausalAssociation"},{"location":"CausalAssociation/#class-causalassociation","text":"A causal association between two activities URI: gocam:CausalAssociation classDiagram class CausalAssociation click CausalAssociation href \"../CausalAssociation\" Association <|-- CausalAssociation click Association href \"../Association\" CausalAssociation : downstream_activity CausalAssociation --> \"0..1\" Activity : downstream_activity click Activity href \"../Activity\" CausalAssociation : evidence CausalAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" CausalAssociation : predicate CausalAssociation --> \"0..1\" PredicateTermObject : predicate click PredicateTermObject href \"../PredicateTermObject\" CausalAssociation : provenances CausalAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" CausalAssociation : type","title":"Class: CausalAssociation"},{"location":"CausalAssociation/#inheritance","text":"Association CausalAssociation","title":"Inheritance"},{"location":"CausalAssociation/#slots","text":"Name Cardinality and Range Description Inheritance predicate 0..1 PredicateTermObject The RO relation that represents the type of relationship direct downstream_activity 0..1 Activity The activity unit that is downstream of this one direct type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association","title":"Slots"},{"location":"CausalAssociation/#usages","text":"used by used in type used Activity causal_associations range CausalAssociation","title":"Usages"},{"location":"CausalAssociation/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"CausalAssociation/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"CausalAssociation/#mappings","text":"Mapping Type Mapped Value self gocam:CausalAssociation native gocam:CausalAssociation","title":"Mappings"},{"location":"CausalAssociation/#linkml-source","text":"","title":"LinkML Source"},{"location":"CausalAssociation/#direct","text":"name: CausalAssociation description: A causal association between two activities from_schema: https://w3id.org/gocam is_a: Association attributes: predicate: name: predicate description: The RO relation that represents the type of relationship from_schema: https://w3id.org/gocam rank: 1000 domain_of: - CausalAssociation range: PredicateTermObject downstream_activity: name: downstream_activity description: The activity unit that is downstream of this one from_schema: https://w3id.org/gocam aliases: - object rank: 1000 domain_of: - CausalAssociation range: Activity","title":"Direct"},{"location":"CausalAssociation/#induced","text":"name: CausalAssociation description: A causal association between two activities from_schema: https://w3id.org/gocam is_a: Association attributes: predicate: name: predicate description: The RO relation that represents the type of relationship from_schema: https://w3id.org/gocam rank: 1000 alias: predicate owner: CausalAssociation domain_of: - CausalAssociation range: PredicateTermObject downstream_activity: name: downstream_activity description: The activity unit that is downstream of this one from_schema: https://w3id.org/gocam aliases: - object rank: 1000 alias: downstream_activity owner: CausalAssociation domain_of: - CausalAssociation range: Activity type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: CausalAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: CausalAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: CausalAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Induced"},{"location":"CausalPredicateEnum/","text":"Enum: CausalPredicateEnum URI: CausalPredicateEnum Permissible Values Value Meaning Description causally upstream of, positive effect RO:0002304 causally upstream of, negative effect RO:0002305 causally upstream of RO:0002411 immediately causally upstream of RO:0002412 causally upstream of or within RO:0002418 causally upstream of or within, negative effect RO:0004046 causally upstream of or within, positive effect RO:0004047 regulates RO:0002211 negatively regulates RO:0002212 positively regulates RO:0002213 Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam LinkML Source name: CausalPredicateEnum from_schema: https://w3id.org/gocam rank: 1000 permissible_values: causally upstream of, positive effect: text: causally upstream of, positive effect meaning: RO:0002304 causally upstream of, negative effect: text: causally upstream of, negative effect meaning: RO:0002305 causally upstream of: text: causally upstream of meaning: RO:0002411 immediately causally upstream of: text: immediately causally upstream of meaning: RO:0002412 causally upstream of or within: text: causally upstream of or within meaning: RO:0002418 causally upstream of or within, negative effect: text: causally upstream of or within, negative effect meaning: RO:0004046 causally upstream of or within, positive effect: text: causally upstream of or within, positive effect meaning: RO:0004047 regulates: text: regulates meaning: RO:0002211 negatively regulates: text: negatively regulates meaning: RO:0002212 positively regulates: text: positively regulates meaning: RO:0002213","title":"Enum: CausalPredicateEnum"},{"location":"CausalPredicateEnum/#enum-causalpredicateenum","text":"URI: CausalPredicateEnum","title":"Enum: CausalPredicateEnum"},{"location":"CausalPredicateEnum/#permissible-values","text":"Value Meaning Description causally upstream of, positive effect RO:0002304 causally upstream of, negative effect RO:0002305 causally upstream of RO:0002411 immediately causally upstream of RO:0002412 causally upstream of or within RO:0002418 causally upstream of or within, negative effect RO:0004046 causally upstream of or within, positive effect RO:0004047 regulates RO:0002211 negatively regulates RO:0002212 positively regulates RO:0002213","title":"Permissible Values"},{"location":"CausalPredicateEnum/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"CausalPredicateEnum/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"CausalPredicateEnum/#linkml-source","text":"name: CausalPredicateEnum from_schema: https://w3id.org/gocam rank: 1000 permissible_values: causally upstream of, positive effect: text: causally upstream of, positive effect meaning: RO:0002304 causally upstream of, negative effect: text: causally upstream of, negative effect meaning: RO:0002305 causally upstream of: text: causally upstream of meaning: RO:0002411 immediately causally upstream of: text: immediately causally upstream of meaning: RO:0002412 causally upstream of or within: text: causally upstream of or within meaning: RO:0002418 causally upstream of or within, negative effect: text: causally upstream of or within, negative effect meaning: RO:0004046 causally upstream of or within, positive effect: text: causally upstream of or within, positive effect meaning: RO:0004047 regulates: text: regulates meaning: RO:0002211 negatively regulates: text: negatively regulates meaning: RO:0002212 positively regulates: text: positively regulates meaning: RO:0002213","title":"LinkML Source"},{"location":"CellTypeAssociation/","text":"Class: CellTypeAssociation An association between an activity and a cell type term URI: gocam:CellTypeAssociation classDiagram class CellTypeAssociation click CellTypeAssociation href \"../CellTypeAssociation\" TermAssociation <|-- CellTypeAssociation click TermAssociation href \"../TermAssociation\" CellTypeAssociation : evidence CellTypeAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" CellTypeAssociation : provenances CellTypeAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" CellTypeAssociation : term CellTypeAssociation --> \"0..1\" CellTypeTermObject : term click CellTypeTermObject href \"../CellTypeTermObject\" CellTypeAssociation : type Inheritance Association TermAssociation CellTypeAssociation Slots Name Cardinality and Range Description Inheritance term 0..1 CellTypeTermObject The ontology term that describes the nature of the association TermAssociation type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:CellTypeAssociation native gocam:CellTypeAssociation LinkML Source Direct name: CellTypeAssociation description: An association between an activity and a cell type term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: CellTypeTermObject part_of: name: part_of range: GrossAnatomyAssociation Induced name: CellTypeAssociation description: An association between an activity and a cell type term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: CellTypeTermObject part_of: name: part_of range: GrossAnatomyAssociation attributes: term: name: term description: The ontology term that describes the nature of the association from_schema: https://w3id.org/gocam alias: term owner: CellTypeAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: CellTypeTermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: CellTypeAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: CellTypeAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: CellTypeAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Class: CellTypeAssociation"},{"location":"CellTypeAssociation/#class-celltypeassociation","text":"An association between an activity and a cell type term URI: gocam:CellTypeAssociation classDiagram class CellTypeAssociation click CellTypeAssociation href \"../CellTypeAssociation\" TermAssociation <|-- CellTypeAssociation click TermAssociation href \"../TermAssociation\" CellTypeAssociation : evidence CellTypeAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" CellTypeAssociation : provenances CellTypeAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" CellTypeAssociation : term CellTypeAssociation --> \"0..1\" CellTypeTermObject : term click CellTypeTermObject href \"../CellTypeTermObject\" CellTypeAssociation : type","title":"Class: CellTypeAssociation"},{"location":"CellTypeAssociation/#inheritance","text":"Association TermAssociation CellTypeAssociation","title":"Inheritance"},{"location":"CellTypeAssociation/#slots","text":"Name Cardinality and Range Description Inheritance term 0..1 CellTypeTermObject The ontology term that describes the nature of the association TermAssociation type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association","title":"Slots"},{"location":"CellTypeAssociation/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"CellTypeAssociation/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"CellTypeAssociation/#mappings","text":"Mapping Type Mapped Value self gocam:CellTypeAssociation native gocam:CellTypeAssociation","title":"Mappings"},{"location":"CellTypeAssociation/#linkml-source","text":"","title":"LinkML Source"},{"location":"CellTypeAssociation/#direct","text":"name: CellTypeAssociation description: An association between an activity and a cell type term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: CellTypeTermObject part_of: name: part_of range: GrossAnatomyAssociation","title":"Direct"},{"location":"CellTypeAssociation/#induced","text":"name: CellTypeAssociation description: An association between an activity and a cell type term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: CellTypeTermObject part_of: name: part_of range: GrossAnatomyAssociation attributes: term: name: term description: The ontology term that describes the nature of the association from_schema: https://w3id.org/gocam alias: term owner: CellTypeAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: CellTypeTermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: CellTypeAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: CellTypeAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: CellTypeAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Induced"},{"location":"CellTypeTermObject/","text":"Class: CellTypeTermObject A term object that represents a cell type term from CL URI: gocam:CellTypeTermObject classDiagram class CellTypeTermObject click CellTypeTermObject href \"../CellTypeTermObject\" TermObject <|-- CellTypeTermObject click TermObject href \"../TermObject\" CellTypeTermObject : id CellTypeTermObject : label CellTypeTermObject : obsolete CellTypeTermObject : type Inheritance Object TermObject CellTypeTermObject Slots Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object Usages used by used in type used CellTypeAssociation term range CellTypeTermObject Identifier and Mapping Information Valid ID Prefixes Instances of this class should have identifiers with one of the following prefixes: CL PO FAO DDANAT Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:CellTypeTermObject native gocam:CellTypeTermObject LinkML Source Direct name: CellTypeTermObject id_prefixes: - CL - PO - FAO - DDANAT description: A term object that represents a cell type term from CL from_schema: https://w3id.org/gocam is_a: TermObject Induced name: CellTypeTermObject id_prefixes: - CL - PO - FAO - DDANAT description: A term object that represents a cell type term from CL from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: CellTypeTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: CellTypeTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: CellTypeTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: CellTypeTermObject domain_of: - Object range: boolean","title":"Class: CellTypeTermObject"},{"location":"CellTypeTermObject/#class-celltypetermobject","text":"A term object that represents a cell type term from CL URI: gocam:CellTypeTermObject classDiagram class CellTypeTermObject click CellTypeTermObject href \"../CellTypeTermObject\" TermObject <|-- CellTypeTermObject click TermObject href \"../TermObject\" CellTypeTermObject : id CellTypeTermObject : label CellTypeTermObject : obsolete CellTypeTermObject : type","title":"Class: CellTypeTermObject"},{"location":"CellTypeTermObject/#inheritance","text":"Object TermObject CellTypeTermObject","title":"Inheritance"},{"location":"CellTypeTermObject/#slots","text":"Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object","title":"Slots"},{"location":"CellTypeTermObject/#usages","text":"used by used in type used CellTypeAssociation term range CellTypeTermObject","title":"Usages"},{"location":"CellTypeTermObject/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"CellTypeTermObject/#valid-id-prefixes","text":"Instances of this class should have identifiers with one of the following prefixes: CL PO FAO DDANAT","title":"Valid ID Prefixes"},{"location":"CellTypeTermObject/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"CellTypeTermObject/#mappings","text":"Mapping Type Mapped Value self gocam:CellTypeTermObject native gocam:CellTypeTermObject","title":"Mappings"},{"location":"CellTypeTermObject/#linkml-source","text":"","title":"LinkML Source"},{"location":"CellTypeTermObject/#direct","text":"name: CellTypeTermObject id_prefixes: - CL - PO - FAO - DDANAT description: A term object that represents a cell type term from CL from_schema: https://w3id.org/gocam is_a: TermObject","title":"Direct"},{"location":"CellTypeTermObject/#induced","text":"name: CellTypeTermObject id_prefixes: - CL - PO - FAO - DDANAT description: A term object that represents a cell type term from CL from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: CellTypeTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: CellTypeTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: CellTypeTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: CellTypeTermObject domain_of: - Object range: boolean","title":"Induced"},{"location":"CellularAnatomicalEntityAssociation/","text":"Class: CellularAnatomicalEntityAssociation An association between an activity and a cellular anatomical entity term URI: gocam:CellularAnatomicalEntityAssociation classDiagram class CellularAnatomicalEntityAssociation click CellularAnatomicalEntityAssociation href \"../CellularAnatomicalEntityAssociation\" TermAssociation <|-- CellularAnatomicalEntityAssociation click TermAssociation href \"../TermAssociation\" CellularAnatomicalEntityAssociation : evidence CellularAnatomicalEntityAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" CellularAnatomicalEntityAssociation : provenances CellularAnatomicalEntityAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" CellularAnatomicalEntityAssociation : term CellularAnatomicalEntityAssociation --> \"0..1\" CellularAnatomicalEntityTermObject : term click CellularAnatomicalEntityTermObject href \"../CellularAnatomicalEntityTermObject\" CellularAnatomicalEntityAssociation : type Inheritance Association TermAssociation CellularAnatomicalEntityAssociation Slots Name Cardinality and Range Description Inheritance term 0..1 CellularAnatomicalEntityTermObject The ontology term that describes the nature of the association TermAssociation type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association Usages used by used in type used Activity occurs_in range CellularAnatomicalEntityAssociation Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:CellularAnatomicalEntityAssociation native gocam:CellularAnatomicalEntityAssociation LinkML Source Direct name: CellularAnatomicalEntityAssociation description: An association between an activity and a cellular anatomical entity term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: CellularAnatomicalEntityTermObject part_of: name: part_of range: CellTypeAssociation Induced name: CellularAnatomicalEntityAssociation description: An association between an activity and a cellular anatomical entity term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: CellularAnatomicalEntityTermObject part_of: name: part_of range: CellTypeAssociation attributes: term: name: term description: The ontology term that describes the nature of the association from_schema: https://w3id.org/gocam alias: term owner: CellularAnatomicalEntityAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: CellularAnatomicalEntityTermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: CellularAnatomicalEntityAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: CellularAnatomicalEntityAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: CellularAnatomicalEntityAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Class: CellularAnatomicalEntityAssociation"},{"location":"CellularAnatomicalEntityAssociation/#class-cellularanatomicalentityassociation","text":"An association between an activity and a cellular anatomical entity term URI: gocam:CellularAnatomicalEntityAssociation classDiagram class CellularAnatomicalEntityAssociation click CellularAnatomicalEntityAssociation href \"../CellularAnatomicalEntityAssociation\" TermAssociation <|-- CellularAnatomicalEntityAssociation click TermAssociation href \"../TermAssociation\" CellularAnatomicalEntityAssociation : evidence CellularAnatomicalEntityAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" CellularAnatomicalEntityAssociation : provenances CellularAnatomicalEntityAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" CellularAnatomicalEntityAssociation : term CellularAnatomicalEntityAssociation --> \"0..1\" CellularAnatomicalEntityTermObject : term click CellularAnatomicalEntityTermObject href \"../CellularAnatomicalEntityTermObject\" CellularAnatomicalEntityAssociation : type","title":"Class: CellularAnatomicalEntityAssociation"},{"location":"CellularAnatomicalEntityAssociation/#inheritance","text":"Association TermAssociation CellularAnatomicalEntityAssociation","title":"Inheritance"},{"location":"CellularAnatomicalEntityAssociation/#slots","text":"Name Cardinality and Range Description Inheritance term 0..1 CellularAnatomicalEntityTermObject The ontology term that describes the nature of the association TermAssociation type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association","title":"Slots"},{"location":"CellularAnatomicalEntityAssociation/#usages","text":"used by used in type used Activity occurs_in range CellularAnatomicalEntityAssociation","title":"Usages"},{"location":"CellularAnatomicalEntityAssociation/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"CellularAnatomicalEntityAssociation/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"CellularAnatomicalEntityAssociation/#mappings","text":"Mapping Type Mapped Value self gocam:CellularAnatomicalEntityAssociation native gocam:CellularAnatomicalEntityAssociation","title":"Mappings"},{"location":"CellularAnatomicalEntityAssociation/#linkml-source","text":"","title":"LinkML Source"},{"location":"CellularAnatomicalEntityAssociation/#direct","text":"name: CellularAnatomicalEntityAssociation description: An association between an activity and a cellular anatomical entity term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: CellularAnatomicalEntityTermObject part_of: name: part_of range: CellTypeAssociation","title":"Direct"},{"location":"CellularAnatomicalEntityAssociation/#induced","text":"name: CellularAnatomicalEntityAssociation description: An association between an activity and a cellular anatomical entity term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: CellularAnatomicalEntityTermObject part_of: name: part_of range: CellTypeAssociation attributes: term: name: term description: The ontology term that describes the nature of the association from_schema: https://w3id.org/gocam alias: term owner: CellularAnatomicalEntityAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: CellularAnatomicalEntityTermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: CellularAnatomicalEntityAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: CellularAnatomicalEntityAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: CellularAnatomicalEntityAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Induced"},{"location":"CellularAnatomicalEntityTermObject/","text":"Class: CellularAnatomicalEntityTermObject A term object that represents a cellular anatomical entity term from GO URI: gocam:CellularAnatomicalEntityTermObject classDiagram class CellularAnatomicalEntityTermObject click CellularAnatomicalEntityTermObject href \"../CellularAnatomicalEntityTermObject\" TermObject <|-- CellularAnatomicalEntityTermObject click TermObject href \"../TermObject\" CellularAnatomicalEntityTermObject : id CellularAnatomicalEntityTermObject : label CellularAnatomicalEntityTermObject : obsolete CellularAnatomicalEntityTermObject : type Inheritance Object TermObject CellularAnatomicalEntityTermObject Slots Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object Usages used by used in type used CellularAnatomicalEntityAssociation term range CellularAnatomicalEntityTermObject Identifier and Mapping Information Valid ID Prefixes Instances of this class should have identifiers with one of the following prefixes: GO Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:CellularAnatomicalEntityTermObject native gocam:CellularAnatomicalEntityTermObject LinkML Source Direct name: CellularAnatomicalEntityTermObject id_prefixes: - GO description: A term object that represents a cellular anatomical entity term from GO from_schema: https://w3id.org/gocam is_a: TermObject Induced name: CellularAnatomicalEntityTermObject id_prefixes: - GO description: A term object that represents a cellular anatomical entity term from GO from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: CellularAnatomicalEntityTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: CellularAnatomicalEntityTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: CellularAnatomicalEntityTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: CellularAnatomicalEntityTermObject domain_of: - Object range: boolean","title":"Class: CellularAnatomicalEntityTermObject"},{"location":"CellularAnatomicalEntityTermObject/#class-cellularanatomicalentitytermobject","text":"A term object that represents a cellular anatomical entity term from GO URI: gocam:CellularAnatomicalEntityTermObject classDiagram class CellularAnatomicalEntityTermObject click CellularAnatomicalEntityTermObject href \"../CellularAnatomicalEntityTermObject\" TermObject <|-- CellularAnatomicalEntityTermObject click TermObject href \"../TermObject\" CellularAnatomicalEntityTermObject : id CellularAnatomicalEntityTermObject : label CellularAnatomicalEntityTermObject : obsolete CellularAnatomicalEntityTermObject : type","title":"Class: CellularAnatomicalEntityTermObject"},{"location":"CellularAnatomicalEntityTermObject/#inheritance","text":"Object TermObject CellularAnatomicalEntityTermObject","title":"Inheritance"},{"location":"CellularAnatomicalEntityTermObject/#slots","text":"Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object","title":"Slots"},{"location":"CellularAnatomicalEntityTermObject/#usages","text":"used by used in type used CellularAnatomicalEntityAssociation term range CellularAnatomicalEntityTermObject","title":"Usages"},{"location":"CellularAnatomicalEntityTermObject/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"CellularAnatomicalEntityTermObject/#valid-id-prefixes","text":"Instances of this class should have identifiers with one of the following prefixes: GO","title":"Valid ID Prefixes"},{"location":"CellularAnatomicalEntityTermObject/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"CellularAnatomicalEntityTermObject/#mappings","text":"Mapping Type Mapped Value self gocam:CellularAnatomicalEntityTermObject native gocam:CellularAnatomicalEntityTermObject","title":"Mappings"},{"location":"CellularAnatomicalEntityTermObject/#linkml-source","text":"","title":"LinkML Source"},{"location":"CellularAnatomicalEntityTermObject/#direct","text":"name: CellularAnatomicalEntityTermObject id_prefixes: - GO description: A term object that represents a cellular anatomical entity term from GO from_schema: https://w3id.org/gocam is_a: TermObject","title":"Direct"},{"location":"CellularAnatomicalEntityTermObject/#induced","text":"name: CellularAnatomicalEntityTermObject id_prefixes: - GO description: A term object that represents a cellular anatomical entity term from GO from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: CellularAnatomicalEntityTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: CellularAnatomicalEntityTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: CellularAnatomicalEntityTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: CellularAnatomicalEntityTermObject domain_of: - Object range: boolean","title":"Induced"},{"location":"Curie/","text":"Type: Curie a compact URI URI: xsd:string base : Curie uri : xsd:string repr : str Comments in RDF serializations this MUST be expanded to a URI in non-RDF serializations MAY be serialized as the compact representation Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam","title":"Type: Curie"},{"location":"Curie/#type-curie","text":"a compact URI URI: xsd:string base : Curie uri : xsd:string repr : str","title":"Type: Curie"},{"location":"Curie/#comments","text":"in RDF serializations this MUST be expanded to a URI in non-RDF serializations MAY be serialized as the compact representation","title":"Comments"},{"location":"Curie/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Curie/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"Date/","text":"Type: Date a date (year, month and day) in an idealized calendar URI: xsd:date base : XSDDate uri : xsd:date repr : str Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam","title":"Type: Date"},{"location":"Date/#type-date","text":"a date (year, month and day) in an idealized calendar URI: xsd:date base : XSDDate uri : xsd:date repr : str","title":"Type: Date"},{"location":"Date/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Date/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"DateOrDatetime/","text":"Type: DateOrDatetime Either a date or a datetime URI: linkml:DateOrDatetime base : str uri : linkml:DateOrDatetime repr : str Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam","title":"Type: DateOrDatetime"},{"location":"DateOrDatetime/#type-dateordatetime","text":"Either a date or a datetime URI: linkml:DateOrDatetime base : str uri : linkml:DateOrDatetime repr : str","title":"Type: DateOrDatetime"},{"location":"DateOrDatetime/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"DateOrDatetime/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"Datetime/","text":"Type: Datetime The combination of a date and time URI: xsd:dateTime base : XSDDateTime uri : xsd:dateTime repr : str Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam","title":"Type: Datetime"},{"location":"Datetime/#type-datetime","text":"The combination of a date and time URI: xsd:dateTime base : XSDDateTime uri : xsd:dateTime repr : str","title":"Type: Datetime"},{"location":"Datetime/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Datetime/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"Decimal/","text":"Type: Decimal A real number with arbitrary precision that conforms to the xsd:decimal specification URI: xsd:decimal base : Decimal uri : xsd:decimal Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam","title":"Type: Decimal"},{"location":"Decimal/#type-decimal","text":"A real number with arbitrary precision that conforms to the xsd:decimal specification URI: xsd:decimal base : Decimal uri : xsd:decimal","title":"Type: Decimal"},{"location":"Decimal/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Decimal/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"Double/","text":"Type: Double A real number that conforms to the xsd:double specification URI: xsd:double base : float uri : xsd:double Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam","title":"Type: Double"},{"location":"Double/#type-double","text":"A real number that conforms to the xsd:double specification URI: xsd:double base : float uri : xsd:double","title":"Type: Double"},{"location":"Double/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Double/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"EnabledByAssociation/","text":"Class: EnabledByAssociation An association between an activity and the gene product or complex that carries it out NOTE : this is an abstract class and should not be instantiated directly URI: gocam:EnabledByAssociation classDiagram class EnabledByAssociation click EnabledByAssociation href \"../EnabledByAssociation\" Association <|-- EnabledByAssociation click Association href \"../Association\" EnabledByAssociation <|-- EnabledByGeneProductAssociation click EnabledByGeneProductAssociation href \"../EnabledByGeneProductAssociation\" EnabledByAssociation <|-- EnabledByProteinComplexAssociation click EnabledByProteinComplexAssociation href \"../EnabledByProteinComplexAssociation\" EnabledByAssociation : evidence EnabledByAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" EnabledByAssociation : provenances EnabledByAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" EnabledByAssociation : term EnabledByAssociation --> \"0..1\" InformationBiomacromoleculeTermObject : term click InformationBiomacromoleculeTermObject href \"../InformationBiomacromoleculeTermObject\" EnabledByAssociation : type Inheritance Association EnabledByAssociation EnabledByGeneProductAssociation EnabledByProteinComplexAssociation Slots Name Cardinality and Range Description Inheritance term 0..1 InformationBiomacromoleculeTermObject The gene product or complex that carries out the activity direct type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association Usages used by used in type used Activity enabled_by range EnabledByAssociation Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:EnabledByAssociation native gocam:EnabledByAssociation LinkML Source Direct name: EnabledByAssociation description: An association between an activity and the gene product or complex that carries it out from_schema: https://w3id.org/gocam is_a: Association abstract: true attributes: term: name: term description: The gene product or complex that carries out the activity from_schema: https://w3id.org/gocam domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: InformationBiomacromoleculeTermObject Induced name: EnabledByAssociation description: An association between an activity and the gene product or complex that carries it out from_schema: https://w3id.org/gocam is_a: Association abstract: true attributes: term: name: term description: The gene product or complex that carries out the activity from_schema: https://w3id.org/gocam alias: term owner: EnabledByAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: InformationBiomacromoleculeTermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: EnabledByAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: EnabledByAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: EnabledByAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Class: EnabledByAssociation"},{"location":"EnabledByAssociation/#class-enabledbyassociation","text":"An association between an activity and the gene product or complex that carries it out NOTE : this is an abstract class and should not be instantiated directly URI: gocam:EnabledByAssociation classDiagram class EnabledByAssociation click EnabledByAssociation href \"../EnabledByAssociation\" Association <|-- EnabledByAssociation click Association href \"../Association\" EnabledByAssociation <|-- EnabledByGeneProductAssociation click EnabledByGeneProductAssociation href \"../EnabledByGeneProductAssociation\" EnabledByAssociation <|-- EnabledByProteinComplexAssociation click EnabledByProteinComplexAssociation href \"../EnabledByProteinComplexAssociation\" EnabledByAssociation : evidence EnabledByAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" EnabledByAssociation : provenances EnabledByAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" EnabledByAssociation : term EnabledByAssociation --> \"0..1\" InformationBiomacromoleculeTermObject : term click InformationBiomacromoleculeTermObject href \"../InformationBiomacromoleculeTermObject\" EnabledByAssociation : type","title":"Class: EnabledByAssociation"},{"location":"EnabledByAssociation/#inheritance","text":"Association EnabledByAssociation EnabledByGeneProductAssociation EnabledByProteinComplexAssociation","title":"Inheritance"},{"location":"EnabledByAssociation/#slots","text":"Name Cardinality and Range Description Inheritance term 0..1 InformationBiomacromoleculeTermObject The gene product or complex that carries out the activity direct type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association","title":"Slots"},{"location":"EnabledByAssociation/#usages","text":"used by used in type used Activity enabled_by range EnabledByAssociation","title":"Usages"},{"location":"EnabledByAssociation/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"EnabledByAssociation/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"EnabledByAssociation/#mappings","text":"Mapping Type Mapped Value self gocam:EnabledByAssociation native gocam:EnabledByAssociation","title":"Mappings"},{"location":"EnabledByAssociation/#linkml-source","text":"","title":"LinkML Source"},{"location":"EnabledByAssociation/#direct","text":"name: EnabledByAssociation description: An association between an activity and the gene product or complex that carries it out from_schema: https://w3id.org/gocam is_a: Association abstract: true attributes: term: name: term description: The gene product or complex that carries out the activity from_schema: https://w3id.org/gocam domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: InformationBiomacromoleculeTermObject","title":"Direct"},{"location":"EnabledByAssociation/#induced","text":"name: EnabledByAssociation description: An association between an activity and the gene product or complex that carries it out from_schema: https://w3id.org/gocam is_a: Association abstract: true attributes: term: name: term description: The gene product or complex that carries out the activity from_schema: https://w3id.org/gocam alias: term owner: EnabledByAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: InformationBiomacromoleculeTermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: EnabledByAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: EnabledByAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: EnabledByAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Induced"},{"location":"EnabledByGeneProductAssociation/","text":"Class: EnabledByGeneProductAssociation An association between an activity and a gene product URI: gocam:EnabledByGeneProductAssociation classDiagram class EnabledByGeneProductAssociation click EnabledByGeneProductAssociation href \"../EnabledByGeneProductAssociation\" EnabledByAssociation <|-- EnabledByGeneProductAssociation click EnabledByAssociation href \"../EnabledByAssociation\" EnabledByGeneProductAssociation : evidence EnabledByGeneProductAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" EnabledByGeneProductAssociation : provenances EnabledByGeneProductAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" EnabledByGeneProductAssociation : term EnabledByGeneProductAssociation --> \"0..1\" GeneProductTermObject : term click GeneProductTermObject href \"../GeneProductTermObject\" EnabledByGeneProductAssociation : type Inheritance Association EnabledByAssociation EnabledByGeneProductAssociation Slots Name Cardinality and Range Description Inheritance term 0..1 GeneProductTermObject The gene product or complex that carries out the activity EnabledByAssociation type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:EnabledByGeneProductAssociation native gocam:EnabledByGeneProductAssociation LinkML Source Direct name: EnabledByGeneProductAssociation description: An association between an activity and a gene product from_schema: https://w3id.org/gocam is_a: EnabledByAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: GeneProductTermObject Induced name: EnabledByGeneProductAssociation description: An association between an activity and a gene product from_schema: https://w3id.org/gocam is_a: EnabledByAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: GeneProductTermObject attributes: term: name: term description: The gene product or complex that carries out the activity from_schema: https://w3id.org/gocam alias: term owner: EnabledByGeneProductAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: GeneProductTermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: EnabledByGeneProductAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: EnabledByGeneProductAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: EnabledByGeneProductAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Class: EnabledByGeneProductAssociation"},{"location":"EnabledByGeneProductAssociation/#class-enabledbygeneproductassociation","text":"An association between an activity and a gene product URI: gocam:EnabledByGeneProductAssociation classDiagram class EnabledByGeneProductAssociation click EnabledByGeneProductAssociation href \"../EnabledByGeneProductAssociation\" EnabledByAssociation <|-- EnabledByGeneProductAssociation click EnabledByAssociation href \"../EnabledByAssociation\" EnabledByGeneProductAssociation : evidence EnabledByGeneProductAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" EnabledByGeneProductAssociation : provenances EnabledByGeneProductAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" EnabledByGeneProductAssociation : term EnabledByGeneProductAssociation --> \"0..1\" GeneProductTermObject : term click GeneProductTermObject href \"../GeneProductTermObject\" EnabledByGeneProductAssociation : type","title":"Class: EnabledByGeneProductAssociation"},{"location":"EnabledByGeneProductAssociation/#inheritance","text":"Association EnabledByAssociation EnabledByGeneProductAssociation","title":"Inheritance"},{"location":"EnabledByGeneProductAssociation/#slots","text":"Name Cardinality and Range Description Inheritance term 0..1 GeneProductTermObject The gene product or complex that carries out the activity EnabledByAssociation type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association","title":"Slots"},{"location":"EnabledByGeneProductAssociation/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"EnabledByGeneProductAssociation/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"EnabledByGeneProductAssociation/#mappings","text":"Mapping Type Mapped Value self gocam:EnabledByGeneProductAssociation native gocam:EnabledByGeneProductAssociation","title":"Mappings"},{"location":"EnabledByGeneProductAssociation/#linkml-source","text":"","title":"LinkML Source"},{"location":"EnabledByGeneProductAssociation/#direct","text":"name: EnabledByGeneProductAssociation description: An association between an activity and a gene product from_schema: https://w3id.org/gocam is_a: EnabledByAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: GeneProductTermObject","title":"Direct"},{"location":"EnabledByGeneProductAssociation/#induced","text":"name: EnabledByGeneProductAssociation description: An association between an activity and a gene product from_schema: https://w3id.org/gocam is_a: EnabledByAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: GeneProductTermObject attributes: term: name: term description: The gene product or complex that carries out the activity from_schema: https://w3id.org/gocam alias: term owner: EnabledByGeneProductAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: GeneProductTermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: EnabledByGeneProductAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: EnabledByGeneProductAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: EnabledByGeneProductAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Induced"},{"location":"EnabledByProteinComplexAssociation/","text":"Class: EnabledByProteinComplexAssociation An association between an activity and a protein complex URI: gocam:EnabledByProteinComplexAssociation classDiagram class EnabledByProteinComplexAssociation click EnabledByProteinComplexAssociation href \"../EnabledByProteinComplexAssociation\" EnabledByAssociation <|-- EnabledByProteinComplexAssociation click EnabledByAssociation href \"../EnabledByAssociation\" EnabledByProteinComplexAssociation : evidence EnabledByProteinComplexAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" EnabledByProteinComplexAssociation : members EnabledByProteinComplexAssociation --> \"*\" GeneProductTermObject : members click GeneProductTermObject href \"../GeneProductTermObject\" EnabledByProteinComplexAssociation : provenances EnabledByProteinComplexAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" EnabledByProteinComplexAssociation : term EnabledByProteinComplexAssociation --> \"0..1\" ProteinComplexTermObject : term click ProteinComplexTermObject href \"../ProteinComplexTermObject\" EnabledByProteinComplexAssociation : type Inheritance Association EnabledByAssociation EnabledByProteinComplexAssociation Slots Name Cardinality and Range Description Inheritance members * GeneProductTermObject The gene products that are part of the complex direct term 0..1 ProteinComplexTermObject The gene product or complex that carries out the activity EnabledByAssociation type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:EnabledByProteinComplexAssociation native gocam:EnabledByProteinComplexAssociation LinkML Source Direct name: EnabledByProteinComplexAssociation description: An association between an activity and a protein complex from_schema: https://w3id.org/gocam is_a: EnabledByAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: ProteinComplexTermObject attributes: members: name: members description: The gene products that are part of the complex from_schema: https://w3id.org/gocam rank: 1000 multivalued: true domain_of: - EnabledByProteinComplexAssociation range: GeneProductTermObject Induced name: EnabledByProteinComplexAssociation description: An association between an activity and a protein complex from_schema: https://w3id.org/gocam is_a: EnabledByAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: ProteinComplexTermObject attributes: members: name: members description: The gene products that are part of the complex from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: members owner: EnabledByProteinComplexAssociation domain_of: - EnabledByProteinComplexAssociation range: GeneProductTermObject term: name: term description: The gene product or complex that carries out the activity from_schema: https://w3id.org/gocam alias: term owner: EnabledByProteinComplexAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: ProteinComplexTermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: EnabledByProteinComplexAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: EnabledByProteinComplexAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: EnabledByProteinComplexAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Class: EnabledByProteinComplexAssociation"},{"location":"EnabledByProteinComplexAssociation/#class-enabledbyproteincomplexassociation","text":"An association between an activity and a protein complex URI: gocam:EnabledByProteinComplexAssociation classDiagram class EnabledByProteinComplexAssociation click EnabledByProteinComplexAssociation href \"../EnabledByProteinComplexAssociation\" EnabledByAssociation <|-- EnabledByProteinComplexAssociation click EnabledByAssociation href \"../EnabledByAssociation\" EnabledByProteinComplexAssociation : evidence EnabledByProteinComplexAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" EnabledByProteinComplexAssociation : members EnabledByProteinComplexAssociation --> \"*\" GeneProductTermObject : members click GeneProductTermObject href \"../GeneProductTermObject\" EnabledByProteinComplexAssociation : provenances EnabledByProteinComplexAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" EnabledByProteinComplexAssociation : term EnabledByProteinComplexAssociation --> \"0..1\" ProteinComplexTermObject : term click ProteinComplexTermObject href \"../ProteinComplexTermObject\" EnabledByProteinComplexAssociation : type","title":"Class: EnabledByProteinComplexAssociation"},{"location":"EnabledByProteinComplexAssociation/#inheritance","text":"Association EnabledByAssociation EnabledByProteinComplexAssociation","title":"Inheritance"},{"location":"EnabledByProteinComplexAssociation/#slots","text":"Name Cardinality and Range Description Inheritance members * GeneProductTermObject The gene products that are part of the complex direct term 0..1 ProteinComplexTermObject The gene product or complex that carries out the activity EnabledByAssociation type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association","title":"Slots"},{"location":"EnabledByProteinComplexAssociation/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"EnabledByProteinComplexAssociation/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"EnabledByProteinComplexAssociation/#mappings","text":"Mapping Type Mapped Value self gocam:EnabledByProteinComplexAssociation native gocam:EnabledByProteinComplexAssociation","title":"Mappings"},{"location":"EnabledByProteinComplexAssociation/#linkml-source","text":"","title":"LinkML Source"},{"location":"EnabledByProteinComplexAssociation/#direct","text":"name: EnabledByProteinComplexAssociation description: An association between an activity and a protein complex from_schema: https://w3id.org/gocam is_a: EnabledByAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: ProteinComplexTermObject attributes: members: name: members description: The gene products that are part of the complex from_schema: https://w3id.org/gocam rank: 1000 multivalued: true domain_of: - EnabledByProteinComplexAssociation range: GeneProductTermObject","title":"Direct"},{"location":"EnabledByProteinComplexAssociation/#induced","text":"name: EnabledByProteinComplexAssociation description: An association between an activity and a protein complex from_schema: https://w3id.org/gocam is_a: EnabledByAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: ProteinComplexTermObject attributes: members: name: members description: The gene products that are part of the complex from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: members owner: EnabledByProteinComplexAssociation domain_of: - EnabledByProteinComplexAssociation range: GeneProductTermObject term: name: term description: The gene product or complex that carries out the activity from_schema: https://w3id.org/gocam alias: term owner: EnabledByProteinComplexAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: ProteinComplexTermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: EnabledByProteinComplexAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: EnabledByProteinComplexAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: EnabledByProteinComplexAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Induced"},{"location":"EvidenceItem/","text":"Class: EvidenceItem An individual piece of evidence that is associated with an assertion in a model URI: gocam:EvidenceItem classDiagram class EvidenceItem click EvidenceItem href \"../EvidenceItem\" EvidenceItem : provenances EvidenceItem --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" EvidenceItem : reference EvidenceItem --> \"0..1\" PublicationObject : reference click PublicationObject href \"../PublicationObject\" EvidenceItem : term EvidenceItem --> \"0..1\" EvidenceTermObject : term click EvidenceTermObject href \"../EvidenceTermObject\" EvidenceItem : with_objects EvidenceItem --> \"*\" Object : with_objects click Object href \"../Object\" Slots Name Cardinality and Range Description Inheritance term 0..1 EvidenceTermObject The ECO term representing the type of evidence direct reference 0..1 PublicationObject The publication of reference that describes the evidence direct with_objects * Object Supporting database entities or terms direct provenances * ProvenanceInfo Provenance about the assertion, e direct Usages used by used in type used Association evidence range EvidenceItem EnabledByAssociation evidence range EvidenceItem EnabledByGeneProductAssociation evidence range EvidenceItem EnabledByProteinComplexAssociation evidence range EvidenceItem CausalAssociation evidence range EvidenceItem TermAssociation evidence range EvidenceItem MolecularFunctionAssociation evidence range EvidenceItem BiologicalProcessAssociation evidence range EvidenceItem CellularAnatomicalEntityAssociation evidence range EvidenceItem CellTypeAssociation evidence range EvidenceItem GrossAnatomyAssociation evidence range EvidenceItem MoleculeAssociation evidence range EvidenceItem Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:EvidenceItem native gocam:EvidenceItem LinkML Source Direct name: EvidenceItem description: An individual piece of evidence that is associated with an assertion in a model from_schema: https://w3id.org/gocam attributes: term: name: term description: The ECO term representing the type of evidence from_schema: https://w3id.org/gocam rank: 1000 domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: EvidenceTermObject reference: name: reference description: The publication of reference that describes the evidence from_schema: https://w3id.org/gocam rank: 1000 domain_of: - EvidenceItem range: PublicationObject with_objects: name: with_objects description: Supporting database entities or terms from_schema: https://w3id.org/gocam aliases: - with - with/from rank: 1000 multivalued: true domain_of: - EvidenceItem range: Object provenances: name: provenances description: Provenance about the assertion, e.g. who made it from_schema: https://w3id.org/gocam multivalued: true domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true Induced name: EvidenceItem description: An individual piece of evidence that is associated with an assertion in a model from_schema: https://w3id.org/gocam attributes: term: name: term description: The ECO term representing the type of evidence from_schema: https://w3id.org/gocam rank: 1000 alias: term owner: EvidenceItem domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: EvidenceTermObject reference: name: reference description: The publication of reference that describes the evidence from_schema: https://w3id.org/gocam rank: 1000 alias: reference owner: EvidenceItem domain_of: - EvidenceItem range: PublicationObject with_objects: name: with_objects description: Supporting database entities or terms from_schema: https://w3id.org/gocam aliases: - with - with/from rank: 1000 multivalued: true alias: with_objects owner: EvidenceItem domain_of: - EvidenceItem range: Object provenances: name: provenances description: Provenance about the assertion, e.g. who made it from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: EvidenceItem domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Class: EvidenceItem"},{"location":"EvidenceItem/#class-evidenceitem","text":"An individual piece of evidence that is associated with an assertion in a model URI: gocam:EvidenceItem classDiagram class EvidenceItem click EvidenceItem href \"../EvidenceItem\" EvidenceItem : provenances EvidenceItem --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" EvidenceItem : reference EvidenceItem --> \"0..1\" PublicationObject : reference click PublicationObject href \"../PublicationObject\" EvidenceItem : term EvidenceItem --> \"0..1\" EvidenceTermObject : term click EvidenceTermObject href \"../EvidenceTermObject\" EvidenceItem : with_objects EvidenceItem --> \"*\" Object : with_objects click Object href \"../Object\"","title":"Class: EvidenceItem"},{"location":"EvidenceItem/#slots","text":"Name Cardinality and Range Description Inheritance term 0..1 EvidenceTermObject The ECO term representing the type of evidence direct reference 0..1 PublicationObject The publication of reference that describes the evidence direct with_objects * Object Supporting database entities or terms direct provenances * ProvenanceInfo Provenance about the assertion, e direct","title":"Slots"},{"location":"EvidenceItem/#usages","text":"used by used in type used Association evidence range EvidenceItem EnabledByAssociation evidence range EvidenceItem EnabledByGeneProductAssociation evidence range EvidenceItem EnabledByProteinComplexAssociation evidence range EvidenceItem CausalAssociation evidence range EvidenceItem TermAssociation evidence range EvidenceItem MolecularFunctionAssociation evidence range EvidenceItem BiologicalProcessAssociation evidence range EvidenceItem CellularAnatomicalEntityAssociation evidence range EvidenceItem CellTypeAssociation evidence range EvidenceItem GrossAnatomyAssociation evidence range EvidenceItem MoleculeAssociation evidence range EvidenceItem","title":"Usages"},{"location":"EvidenceItem/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"EvidenceItem/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"EvidenceItem/#mappings","text":"Mapping Type Mapped Value self gocam:EvidenceItem native gocam:EvidenceItem","title":"Mappings"},{"location":"EvidenceItem/#linkml-source","text":"","title":"LinkML Source"},{"location":"EvidenceItem/#direct","text":"name: EvidenceItem description: An individual piece of evidence that is associated with an assertion in a model from_schema: https://w3id.org/gocam attributes: term: name: term description: The ECO term representing the type of evidence from_schema: https://w3id.org/gocam rank: 1000 domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: EvidenceTermObject reference: name: reference description: The publication of reference that describes the evidence from_schema: https://w3id.org/gocam rank: 1000 domain_of: - EvidenceItem range: PublicationObject with_objects: name: with_objects description: Supporting database entities or terms from_schema: https://w3id.org/gocam aliases: - with - with/from rank: 1000 multivalued: true domain_of: - EvidenceItem range: Object provenances: name: provenances description: Provenance about the assertion, e.g. who made it from_schema: https://w3id.org/gocam multivalued: true domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Direct"},{"location":"EvidenceItem/#induced","text":"name: EvidenceItem description: An individual piece of evidence that is associated with an assertion in a model from_schema: https://w3id.org/gocam attributes: term: name: term description: The ECO term representing the type of evidence from_schema: https://w3id.org/gocam rank: 1000 alias: term owner: EvidenceItem domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: EvidenceTermObject reference: name: reference description: The publication of reference that describes the evidence from_schema: https://w3id.org/gocam rank: 1000 alias: reference owner: EvidenceItem domain_of: - EvidenceItem range: PublicationObject with_objects: name: with_objects description: Supporting database entities or terms from_schema: https://w3id.org/gocam aliases: - with - with/from rank: 1000 multivalued: true alias: with_objects owner: EvidenceItem domain_of: - EvidenceItem range: Object provenances: name: provenances description: Provenance about the assertion, e.g. who made it from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: EvidenceItem domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Induced"},{"location":"EvidenceTermObject/","text":"Class: EvidenceTermObject A term object that represents an evidence term from ECO URI: gocam:EvidenceTermObject classDiagram class EvidenceTermObject click EvidenceTermObject href \"../EvidenceTermObject\" TermObject <|-- EvidenceTermObject click TermObject href \"../TermObject\" EvidenceTermObject : id EvidenceTermObject : label EvidenceTermObject : obsolete EvidenceTermObject : type Inheritance Object TermObject EvidenceTermObject Slots Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object Usages used by used in type used EvidenceItem term range EvidenceTermObject Identifier and Mapping Information Valid ID Prefixes Instances of this class should have identifiers with one of the following prefixes: ECO Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:EvidenceTermObject native gocam:EvidenceTermObject LinkML Source Direct name: EvidenceTermObject id_prefixes: - ECO description: A term object that represents an evidence term from ECO from_schema: https://w3id.org/gocam is_a: TermObject Induced name: EvidenceTermObject id_prefixes: - ECO description: A term object that represents an evidence term from ECO from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: EvidenceTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: EvidenceTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: EvidenceTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: EvidenceTermObject domain_of: - Object range: boolean","title":"Class: EvidenceTermObject"},{"location":"EvidenceTermObject/#class-evidencetermobject","text":"A term object that represents an evidence term from ECO URI: gocam:EvidenceTermObject classDiagram class EvidenceTermObject click EvidenceTermObject href \"../EvidenceTermObject\" TermObject <|-- EvidenceTermObject click TermObject href \"../TermObject\" EvidenceTermObject : id EvidenceTermObject : label EvidenceTermObject : obsolete EvidenceTermObject : type","title":"Class: EvidenceTermObject"},{"location":"EvidenceTermObject/#inheritance","text":"Object TermObject EvidenceTermObject","title":"Inheritance"},{"location":"EvidenceTermObject/#slots","text":"Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object","title":"Slots"},{"location":"EvidenceTermObject/#usages","text":"used by used in type used EvidenceItem term range EvidenceTermObject","title":"Usages"},{"location":"EvidenceTermObject/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"EvidenceTermObject/#valid-id-prefixes","text":"Instances of this class should have identifiers with one of the following prefixes: ECO","title":"Valid ID Prefixes"},{"location":"EvidenceTermObject/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"EvidenceTermObject/#mappings","text":"Mapping Type Mapped Value self gocam:EvidenceTermObject native gocam:EvidenceTermObject","title":"Mappings"},{"location":"EvidenceTermObject/#linkml-source","text":"","title":"LinkML Source"},{"location":"EvidenceTermObject/#direct","text":"name: EvidenceTermObject id_prefixes: - ECO description: A term object that represents an evidence term from ECO from_schema: https://w3id.org/gocam is_a: TermObject","title":"Direct"},{"location":"EvidenceTermObject/#induced","text":"name: EvidenceTermObject id_prefixes: - ECO description: A term object that represents an evidence term from ECO from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: EvidenceTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: EvidenceTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: EvidenceTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: EvidenceTermObject domain_of: - Object range: boolean","title":"Induced"},{"location":"Float/","text":"Type: Float A real number that conforms to the xsd:float specification URI: xsd:float base : float uri : xsd:float Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam","title":"Type: Float"},{"location":"Float/#type-float","text":"A real number that conforms to the xsd:float specification URI: xsd:float base : float uri : xsd:float","title":"Type: Float"},{"location":"Float/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Float/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"GeneProductTermObject/","text":"Class: GeneProductTermObject A term object that represents a gene product term from GO or UniProtKB URI: gocam:GeneProductTermObject classDiagram class GeneProductTermObject click GeneProductTermObject href \"../GeneProductTermObject\" InformationBiomacromoleculeTermObject <|-- GeneProductTermObject click InformationBiomacromoleculeTermObject href \"../InformationBiomacromoleculeTermObject\" GeneProductTermObject : id GeneProductTermObject : label GeneProductTermObject : obsolete GeneProductTermObject : type Inheritance Object TermObject InformationBiomacromoleculeTermObject GeneProductTermObject Slots Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object Usages used by used in type used EnabledByGeneProductAssociation term range GeneProductTermObject EnabledByProteinComplexAssociation members range GeneProductTermObject Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:GeneProductTermObject native gocam:GeneProductTermObject LinkML Source Direct name: GeneProductTermObject description: A term object that represents a gene product term from GO or UniProtKB from_schema: https://w3id.org/gocam is_a: InformationBiomacromoleculeTermObject Induced name: GeneProductTermObject description: A term object that represents a gene product term from GO or UniProtKB from_schema: https://w3id.org/gocam is_a: InformationBiomacromoleculeTermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: GeneProductTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: GeneProductTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: GeneProductTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: GeneProductTermObject domain_of: - Object range: boolean","title":"Class: GeneProductTermObject"},{"location":"GeneProductTermObject/#class-geneproducttermobject","text":"A term object that represents a gene product term from GO or UniProtKB URI: gocam:GeneProductTermObject classDiagram class GeneProductTermObject click GeneProductTermObject href \"../GeneProductTermObject\" InformationBiomacromoleculeTermObject <|-- GeneProductTermObject click InformationBiomacromoleculeTermObject href \"../InformationBiomacromoleculeTermObject\" GeneProductTermObject : id GeneProductTermObject : label GeneProductTermObject : obsolete GeneProductTermObject : type","title":"Class: GeneProductTermObject"},{"location":"GeneProductTermObject/#inheritance","text":"Object TermObject InformationBiomacromoleculeTermObject GeneProductTermObject","title":"Inheritance"},{"location":"GeneProductTermObject/#slots","text":"Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object","title":"Slots"},{"location":"GeneProductTermObject/#usages","text":"used by used in type used EnabledByGeneProductAssociation term range GeneProductTermObject EnabledByProteinComplexAssociation members range GeneProductTermObject","title":"Usages"},{"location":"GeneProductTermObject/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"GeneProductTermObject/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"GeneProductTermObject/#mappings","text":"Mapping Type Mapped Value self gocam:GeneProductTermObject native gocam:GeneProductTermObject","title":"Mappings"},{"location":"GeneProductTermObject/#linkml-source","text":"","title":"LinkML Source"},{"location":"GeneProductTermObject/#direct","text":"name: GeneProductTermObject description: A term object that represents a gene product term from GO or UniProtKB from_schema: https://w3id.org/gocam is_a: InformationBiomacromoleculeTermObject","title":"Direct"},{"location":"GeneProductTermObject/#induced","text":"name: GeneProductTermObject description: A term object that represents a gene product term from GO or UniProtKB from_schema: https://w3id.org/gocam is_a: InformationBiomacromoleculeTermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: GeneProductTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: GeneProductTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: GeneProductTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: GeneProductTermObject domain_of: - Object range: boolean","title":"Induced"},{"location":"GrossAnatomicalStructureTermObject/","text":"Class: GrossAnatomicalStructureTermObject A term object that represents a gross anatomical structure term from UBERON URI: gocam:GrossAnatomicalStructureTermObject classDiagram class GrossAnatomicalStructureTermObject click GrossAnatomicalStructureTermObject href \"../GrossAnatomicalStructureTermObject\" TermObject <|-- GrossAnatomicalStructureTermObject click TermObject href \"../TermObject\" GrossAnatomicalStructureTermObject : id GrossAnatomicalStructureTermObject : label GrossAnatomicalStructureTermObject : obsolete GrossAnatomicalStructureTermObject : type Inheritance Object TermObject GrossAnatomicalStructureTermObject Slots Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object Usages used by used in type used GrossAnatomyAssociation term range GrossAnatomicalStructureTermObject Identifier and Mapping Information Valid ID Prefixes Instances of this class should have identifiers with one of the following prefixes: UBERON PO FAO DDANAT Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:GrossAnatomicalStructureTermObject native gocam:GrossAnatomicalStructureTermObject LinkML Source Direct name: GrossAnatomicalStructureTermObject id_prefixes: - UBERON - PO - FAO - DDANAT description: A term object that represents a gross anatomical structure term from UBERON from_schema: https://w3id.org/gocam is_a: TermObject Induced name: GrossAnatomicalStructureTermObject id_prefixes: - UBERON - PO - FAO - DDANAT description: A term object that represents a gross anatomical structure term from UBERON from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: GrossAnatomicalStructureTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: GrossAnatomicalStructureTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: GrossAnatomicalStructureTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: GrossAnatomicalStructureTermObject domain_of: - Object range: boolean","title":"Class: GrossAnatomicalStructureTermObject"},{"location":"GrossAnatomicalStructureTermObject/#class-grossanatomicalstructuretermobject","text":"A term object that represents a gross anatomical structure term from UBERON URI: gocam:GrossAnatomicalStructureTermObject classDiagram class GrossAnatomicalStructureTermObject click GrossAnatomicalStructureTermObject href \"../GrossAnatomicalStructureTermObject\" TermObject <|-- GrossAnatomicalStructureTermObject click TermObject href \"../TermObject\" GrossAnatomicalStructureTermObject : id GrossAnatomicalStructureTermObject : label GrossAnatomicalStructureTermObject : obsolete GrossAnatomicalStructureTermObject : type","title":"Class: GrossAnatomicalStructureTermObject"},{"location":"GrossAnatomicalStructureTermObject/#inheritance","text":"Object TermObject GrossAnatomicalStructureTermObject","title":"Inheritance"},{"location":"GrossAnatomicalStructureTermObject/#slots","text":"Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object","title":"Slots"},{"location":"GrossAnatomicalStructureTermObject/#usages","text":"used by used in type used GrossAnatomyAssociation term range GrossAnatomicalStructureTermObject","title":"Usages"},{"location":"GrossAnatomicalStructureTermObject/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"GrossAnatomicalStructureTermObject/#valid-id-prefixes","text":"Instances of this class should have identifiers with one of the following prefixes: UBERON PO FAO DDANAT","title":"Valid ID Prefixes"},{"location":"GrossAnatomicalStructureTermObject/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"GrossAnatomicalStructureTermObject/#mappings","text":"Mapping Type Mapped Value self gocam:GrossAnatomicalStructureTermObject native gocam:GrossAnatomicalStructureTermObject","title":"Mappings"},{"location":"GrossAnatomicalStructureTermObject/#linkml-source","text":"","title":"LinkML Source"},{"location":"GrossAnatomicalStructureTermObject/#direct","text":"name: GrossAnatomicalStructureTermObject id_prefixes: - UBERON - PO - FAO - DDANAT description: A term object that represents a gross anatomical structure term from UBERON from_schema: https://w3id.org/gocam is_a: TermObject","title":"Direct"},{"location":"GrossAnatomicalStructureTermObject/#induced","text":"name: GrossAnatomicalStructureTermObject id_prefixes: - UBERON - PO - FAO - DDANAT description: A term object that represents a gross anatomical structure term from UBERON from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: GrossAnatomicalStructureTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: GrossAnatomicalStructureTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: GrossAnatomicalStructureTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: GrossAnatomicalStructureTermObject domain_of: - Object range: boolean","title":"Induced"},{"location":"GrossAnatomyAssociation/","text":"Class: GrossAnatomyAssociation An association between an activity and a gross anatomical structure term URI: gocam:GrossAnatomyAssociation classDiagram class GrossAnatomyAssociation click GrossAnatomyAssociation href \"../GrossAnatomyAssociation\" TermAssociation <|-- GrossAnatomyAssociation click TermAssociation href \"../TermAssociation\" GrossAnatomyAssociation : evidence GrossAnatomyAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" GrossAnatomyAssociation : provenances GrossAnatomyAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" GrossAnatomyAssociation : term GrossAnatomyAssociation --> \"0..1\" GrossAnatomicalStructureTermObject : term click GrossAnatomicalStructureTermObject href \"../GrossAnatomicalStructureTermObject\" GrossAnatomyAssociation : type Inheritance Association TermAssociation GrossAnatomyAssociation Slots Name Cardinality and Range Description Inheritance term 0..1 GrossAnatomicalStructureTermObject The ontology term that describes the nature of the association TermAssociation type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:GrossAnatomyAssociation native gocam:GrossAnatomyAssociation LinkML Source Direct name: GrossAnatomyAssociation description: An association between an activity and a gross anatomical structure term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: GrossAnatomicalStructureTermObject part_of: name: part_of range: GrossAnatomyAssociation Induced name: GrossAnatomyAssociation description: An association between an activity and a gross anatomical structure term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: GrossAnatomicalStructureTermObject part_of: name: part_of range: GrossAnatomyAssociation attributes: term: name: term description: The ontology term that describes the nature of the association from_schema: https://w3id.org/gocam alias: term owner: GrossAnatomyAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: GrossAnatomicalStructureTermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: GrossAnatomyAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: GrossAnatomyAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: GrossAnatomyAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Class: GrossAnatomyAssociation"},{"location":"GrossAnatomyAssociation/#class-grossanatomyassociation","text":"An association between an activity and a gross anatomical structure term URI: gocam:GrossAnatomyAssociation classDiagram class GrossAnatomyAssociation click GrossAnatomyAssociation href \"../GrossAnatomyAssociation\" TermAssociation <|-- GrossAnatomyAssociation click TermAssociation href \"../TermAssociation\" GrossAnatomyAssociation : evidence GrossAnatomyAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" GrossAnatomyAssociation : provenances GrossAnatomyAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" GrossAnatomyAssociation : term GrossAnatomyAssociation --> \"0..1\" GrossAnatomicalStructureTermObject : term click GrossAnatomicalStructureTermObject href \"../GrossAnatomicalStructureTermObject\" GrossAnatomyAssociation : type","title":"Class: GrossAnatomyAssociation"},{"location":"GrossAnatomyAssociation/#inheritance","text":"Association TermAssociation GrossAnatomyAssociation","title":"Inheritance"},{"location":"GrossAnatomyAssociation/#slots","text":"Name Cardinality and Range Description Inheritance term 0..1 GrossAnatomicalStructureTermObject The ontology term that describes the nature of the association TermAssociation type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association","title":"Slots"},{"location":"GrossAnatomyAssociation/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"GrossAnatomyAssociation/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"GrossAnatomyAssociation/#mappings","text":"Mapping Type Mapped Value self gocam:GrossAnatomyAssociation native gocam:GrossAnatomyAssociation","title":"Mappings"},{"location":"GrossAnatomyAssociation/#linkml-source","text":"","title":"LinkML Source"},{"location":"GrossAnatomyAssociation/#direct","text":"name: GrossAnatomyAssociation description: An association between an activity and a gross anatomical structure term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: GrossAnatomicalStructureTermObject part_of: name: part_of range: GrossAnatomyAssociation","title":"Direct"},{"location":"GrossAnatomyAssociation/#induced","text":"name: GrossAnatomyAssociation description: An association between an activity and a gross anatomical structure term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: GrossAnatomicalStructureTermObject part_of: name: part_of range: GrossAnatomyAssociation attributes: term: name: term description: The ontology term that describes the nature of the association from_schema: https://w3id.org/gocam alias: term owner: GrossAnatomyAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: GrossAnatomicalStructureTermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: GrossAnatomyAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: GrossAnatomyAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: GrossAnatomyAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Induced"},{"location":"InformationBiomacromoleculeCategory/","text":"Enum: InformationBiomacromoleculeCategory URI: InformationBiomacromoleculeCategory Permissible Values Value Meaning Description GeneOrReferenceProtein biolink.GeneOrGeneProduct ProteinIsoform None MacromolecularComplex None Unknown None Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam LinkML Source name: InformationBiomacromoleculeCategory from_schema: https://w3id.org/gocam rank: 1000 permissible_values: GeneOrReferenceProtein: text: GeneOrReferenceProtein meaning: biolink.GeneOrGeneProduct ProteinIsoform: text: ProteinIsoform MacromolecularComplex: text: MacromolecularComplex Unknown: text: Unknown","title":"Enum: InformationBiomacromoleculeCategory"},{"location":"InformationBiomacromoleculeCategory/#enum-informationbiomacromoleculecategory","text":"URI: InformationBiomacromoleculeCategory","title":"Enum: InformationBiomacromoleculeCategory"},{"location":"InformationBiomacromoleculeCategory/#permissible-values","text":"Value Meaning Description GeneOrReferenceProtein biolink.GeneOrGeneProduct ProteinIsoform None MacromolecularComplex None Unknown None","title":"Permissible Values"},{"location":"InformationBiomacromoleculeCategory/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"InformationBiomacromoleculeCategory/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"InformationBiomacromoleculeCategory/#linkml-source","text":"name: InformationBiomacromoleculeCategory from_schema: https://w3id.org/gocam rank: 1000 permissible_values: GeneOrReferenceProtein: text: GeneOrReferenceProtein meaning: biolink.GeneOrGeneProduct ProteinIsoform: text: ProteinIsoform MacromolecularComplex: text: MacromolecularComplex Unknown: text: Unknown","title":"LinkML Source"},{"location":"InformationBiomacromoleculeTermObject/","text":"Class: InformationBiomacromoleculeTermObject An abstract class for all information biomacromolecule term objects NOTE : this is an abstract class and should not be instantiated directly URI: gocam:InformationBiomacromoleculeTermObject classDiagram class InformationBiomacromoleculeTermObject click InformationBiomacromoleculeTermObject href \"../InformationBiomacromoleculeTermObject\" TermObject <|-- InformationBiomacromoleculeTermObject click TermObject href \"../TermObject\" InformationBiomacromoleculeTermObject <|-- GeneProductTermObject click GeneProductTermObject href \"../GeneProductTermObject\" InformationBiomacromoleculeTermObject <|-- ProteinComplexTermObject click ProteinComplexTermObject href \"../ProteinComplexTermObject\" InformationBiomacromoleculeTermObject : id InformationBiomacromoleculeTermObject : label InformationBiomacromoleculeTermObject : obsolete InformationBiomacromoleculeTermObject : type Inheritance Object TermObject InformationBiomacromoleculeTermObject GeneProductTermObject ProteinComplexTermObject Slots Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object Usages used by used in type used EnabledByAssociation term range InformationBiomacromoleculeTermObject Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:InformationBiomacromoleculeTermObject native gocam:InformationBiomacromoleculeTermObject LinkML Source Direct name: InformationBiomacromoleculeTermObject description: An abstract class for all information biomacromolecule term objects from_schema: https://w3id.org/gocam is_a: TermObject abstract: true Induced name: InformationBiomacromoleculeTermObject description: An abstract class for all information biomacromolecule term objects from_schema: https://w3id.org/gocam is_a: TermObject abstract: true attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: InformationBiomacromoleculeTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: InformationBiomacromoleculeTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: InformationBiomacromoleculeTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: InformationBiomacromoleculeTermObject domain_of: - Object range: boolean","title":"Class: InformationBiomacromoleculeTermObject"},{"location":"InformationBiomacromoleculeTermObject/#class-informationbiomacromoleculetermobject","text":"An abstract class for all information biomacromolecule term objects NOTE : this is an abstract class and should not be instantiated directly URI: gocam:InformationBiomacromoleculeTermObject classDiagram class InformationBiomacromoleculeTermObject click InformationBiomacromoleculeTermObject href \"../InformationBiomacromoleculeTermObject\" TermObject <|-- InformationBiomacromoleculeTermObject click TermObject href \"../TermObject\" InformationBiomacromoleculeTermObject <|-- GeneProductTermObject click GeneProductTermObject href \"../GeneProductTermObject\" InformationBiomacromoleculeTermObject <|-- ProteinComplexTermObject click ProteinComplexTermObject href \"../ProteinComplexTermObject\" InformationBiomacromoleculeTermObject : id InformationBiomacromoleculeTermObject : label InformationBiomacromoleculeTermObject : obsolete InformationBiomacromoleculeTermObject : type","title":"Class: InformationBiomacromoleculeTermObject"},{"location":"InformationBiomacromoleculeTermObject/#inheritance","text":"Object TermObject InformationBiomacromoleculeTermObject GeneProductTermObject ProteinComplexTermObject","title":"Inheritance"},{"location":"InformationBiomacromoleculeTermObject/#slots","text":"Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object","title":"Slots"},{"location":"InformationBiomacromoleculeTermObject/#usages","text":"used by used in type used EnabledByAssociation term range InformationBiomacromoleculeTermObject","title":"Usages"},{"location":"InformationBiomacromoleculeTermObject/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"InformationBiomacromoleculeTermObject/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"InformationBiomacromoleculeTermObject/#mappings","text":"Mapping Type Mapped Value self gocam:InformationBiomacromoleculeTermObject native gocam:InformationBiomacromoleculeTermObject","title":"Mappings"},{"location":"InformationBiomacromoleculeTermObject/#linkml-source","text":"","title":"LinkML Source"},{"location":"InformationBiomacromoleculeTermObject/#direct","text":"name: InformationBiomacromoleculeTermObject description: An abstract class for all information biomacromolecule term objects from_schema: https://w3id.org/gocam is_a: TermObject abstract: true","title":"Direct"},{"location":"InformationBiomacromoleculeTermObject/#induced","text":"name: InformationBiomacromoleculeTermObject description: An abstract class for all information biomacromolecule term objects from_schema: https://w3id.org/gocam is_a: TermObject abstract: true attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: InformationBiomacromoleculeTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: InformationBiomacromoleculeTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: InformationBiomacromoleculeTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: InformationBiomacromoleculeTermObject domain_of: - Object range: boolean","title":"Induced"},{"location":"Integer/","text":"Type: Integer An integer URI: xsd:integer base : int uri : xsd:integer Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam","title":"Type: Integer"},{"location":"Integer/#type-integer","text":"An integer URI: xsd:integer base : int uri : xsd:integer","title":"Type: Integer"},{"location":"Integer/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Integer/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"Jsonpath/","text":"Type: Jsonpath A string encoding a JSON Path. The value of the string MUST conform to JSON Point syntax and SHOULD dereference to zero or more valid objects within the current instance document when encoded in tree form. URI: xsd:string base : str uri : xsd:string repr : str Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam","title":"Type: Jsonpath"},{"location":"Jsonpath/#type-jsonpath","text":"A string encoding a JSON Path. The value of the string MUST conform to JSON Point syntax and SHOULD dereference to zero or more valid objects within the current instance document when encoded in tree form. URI: xsd:string base : str uri : xsd:string repr : str","title":"Type: Jsonpath"},{"location":"Jsonpath/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Jsonpath/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"Jsonpointer/","text":"Type: Jsonpointer A string encoding a JSON Pointer. The value of the string MUST conform to JSON Point syntax and SHOULD dereference to a valid object within the current instance document when encoded in tree form. URI: xsd:string base : str uri : xsd:string repr : str Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam","title":"Type: Jsonpointer"},{"location":"Jsonpointer/#type-jsonpointer","text":"A string encoding a JSON Pointer. The value of the string MUST conform to JSON Point syntax and SHOULD dereference to a valid object within the current instance document when encoded in tree form. URI: xsd:string base : str uri : xsd:string repr : str","title":"Type: Jsonpointer"},{"location":"Jsonpointer/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Jsonpointer/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"Model/","text":"Class: Model A model of a biological program consisting of a set of causally connected activities URI: gocam:Model classDiagram class Model click Model href \"../Model\" Model : activities Model --> \"*\" Activity : activities click Activity href \"../Activity\" Model : comments Model : id Model : objects Model --> \"*\" Object : objects click Object href \"../Object\" Model : provenances Model --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" Model : status Model --> \"0..1\" ModelStateEnum : status click ModelStateEnum href \"../ModelStateEnum\" Model : taxon Model --> \"0..1\" TaxonTermObject : taxon click TaxonTermObject href \"../TaxonTermObject\" Model : title Slots Name Cardinality and Range Description Inheritance id 1 Uriorcurie The identifier of the model direct title 0..1 String The human-readable descriptive title of the model direct taxon 0..1 TaxonTermObject The primary taxon that the model is about direct status 0..1 ModelStateEnum The status of the model direct comments * String Comments about the model direct activities * Activity All of the activities that are part of the model direct objects * Object All of the objects that are part of the model direct provenances * ProvenanceInfo Model-level provenance information direct Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:Model native gocam:Model LinkML Source Direct name: Model description: A model of a biological program consisting of a set of causally connected activities from_schema: https://w3id.org/gocam attributes: id: name: id description: The identifier of the model. Should be in gocam namespace. from_schema: https://w3id.org/gocam rank: 1000 identifier: true domain_of: - Model - Activity - Object range: uriorcurie required: true title: name: title description: The human-readable descriptive title of the model from_schema: https://w3id.org/gocam rank: 1000 slot_uri: dct:title domain_of: - Model taxon: name: taxon description: The primary taxon that the model is about from_schema: https://w3id.org/gocam rank: 1000 domain_of: - Model range: TaxonTermObject status: name: status description: The status of the model from_schema: https://w3id.org/gocam aliases: - model state rank: 1000 slot_uri: pav:status domain_of: - Model range: ModelStateEnum comments: name: comments description: Comments about the model from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:comment multivalued: true domain_of: - Model activities: name: activities description: All of the activities that are part of the model from_schema: https://w3id.org/gocam rank: 1000 multivalued: true domain_of: - Model range: Activity inlined: true inlined_as_list: true objects: name: objects description: All of the objects that are part of the model. This includes terms as well as publications and database objects like gene. This is not strictly part of the data managed by the model, it is for convenience, and should be refreshed from outside. from_schema: https://w3id.org/gocam rank: 1000 multivalued: true domain_of: - Model range: Object inlined: true inlined_as_list: true provenances: name: provenances description: Model-level provenance information from_schema: https://w3id.org/gocam rank: 1000 multivalued: true domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true Induced name: Model description: A model of a biological program consisting of a set of causally connected activities from_schema: https://w3id.org/gocam attributes: id: name: id description: The identifier of the model. Should be in gocam namespace. from_schema: https://w3id.org/gocam rank: 1000 identifier: true alias: id owner: Model domain_of: - Model - Activity - Object range: uriorcurie title: name: title description: The human-readable descriptive title of the model from_schema: https://w3id.org/gocam rank: 1000 slot_uri: dct:title alias: title owner: Model domain_of: - Model range: string taxon: name: taxon description: The primary taxon that the model is about from_schema: https://w3id.org/gocam rank: 1000 alias: taxon owner: Model domain_of: - Model range: TaxonTermObject status: name: status description: The status of the model from_schema: https://w3id.org/gocam aliases: - model state rank: 1000 slot_uri: pav:status alias: status owner: Model domain_of: - Model range: ModelStateEnum comments: name: comments description: Comments about the model from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:comment multivalued: true alias: comments owner: Model domain_of: - Model range: string activities: name: activities description: All of the activities that are part of the model from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: activities owner: Model domain_of: - Model range: Activity inlined_as_list: true objects: name: objects description: All of the objects that are part of the model. This includes terms as well as publications and database objects like gene. This is not strictly part of the data managed by the model, it is for convenience, and should be refreshed from outside. from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: objects owner: Model domain_of: - Model range: Object inlined_as_list: true provenances: name: provenances description: Model-level provenance information from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: provenances owner: Model domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined_as_list: true","title":"Class: Model"},{"location":"Model/#class-model","text":"A model of a biological program consisting of a set of causally connected activities URI: gocam:Model classDiagram class Model click Model href \"../Model\" Model : activities Model --> \"*\" Activity : activities click Activity href \"../Activity\" Model : comments Model : id Model : objects Model --> \"*\" Object : objects click Object href \"../Object\" Model : provenances Model --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" Model : status Model --> \"0..1\" ModelStateEnum : status click ModelStateEnum href \"../ModelStateEnum\" Model : taxon Model --> \"0..1\" TaxonTermObject : taxon click TaxonTermObject href \"../TaxonTermObject\" Model : title","title":"Class: Model"},{"location":"Model/#slots","text":"Name Cardinality and Range Description Inheritance id 1 Uriorcurie The identifier of the model direct title 0..1 String The human-readable descriptive title of the model direct taxon 0..1 TaxonTermObject The primary taxon that the model is about direct status 0..1 ModelStateEnum The status of the model direct comments * String Comments about the model direct activities * Activity All of the activities that are part of the model direct objects * Object All of the objects that are part of the model direct provenances * ProvenanceInfo Model-level provenance information direct","title":"Slots"},{"location":"Model/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Model/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"Model/#mappings","text":"Mapping Type Mapped Value self gocam:Model native gocam:Model","title":"Mappings"},{"location":"Model/#linkml-source","text":"","title":"LinkML Source"},{"location":"Model/#direct","text":"name: Model description: A model of a biological program consisting of a set of causally connected activities from_schema: https://w3id.org/gocam attributes: id: name: id description: The identifier of the model. Should be in gocam namespace. from_schema: https://w3id.org/gocam rank: 1000 identifier: true domain_of: - Model - Activity - Object range: uriorcurie required: true title: name: title description: The human-readable descriptive title of the model from_schema: https://w3id.org/gocam rank: 1000 slot_uri: dct:title domain_of: - Model taxon: name: taxon description: The primary taxon that the model is about from_schema: https://w3id.org/gocam rank: 1000 domain_of: - Model range: TaxonTermObject status: name: status description: The status of the model from_schema: https://w3id.org/gocam aliases: - model state rank: 1000 slot_uri: pav:status domain_of: - Model range: ModelStateEnum comments: name: comments description: Comments about the model from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:comment multivalued: true domain_of: - Model activities: name: activities description: All of the activities that are part of the model from_schema: https://w3id.org/gocam rank: 1000 multivalued: true domain_of: - Model range: Activity inlined: true inlined_as_list: true objects: name: objects description: All of the objects that are part of the model. This includes terms as well as publications and database objects like gene. This is not strictly part of the data managed by the model, it is for convenience, and should be refreshed from outside. from_schema: https://w3id.org/gocam rank: 1000 multivalued: true domain_of: - Model range: Object inlined: true inlined_as_list: true provenances: name: provenances description: Model-level provenance information from_schema: https://w3id.org/gocam rank: 1000 multivalued: true domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Direct"},{"location":"Model/#induced","text":"name: Model description: A model of a biological program consisting of a set of causally connected activities from_schema: https://w3id.org/gocam attributes: id: name: id description: The identifier of the model. Should be in gocam namespace. from_schema: https://w3id.org/gocam rank: 1000 identifier: true alias: id owner: Model domain_of: - Model - Activity - Object range: uriorcurie title: name: title description: The human-readable descriptive title of the model from_schema: https://w3id.org/gocam rank: 1000 slot_uri: dct:title alias: title owner: Model domain_of: - Model range: string taxon: name: taxon description: The primary taxon that the model is about from_schema: https://w3id.org/gocam rank: 1000 alias: taxon owner: Model domain_of: - Model range: TaxonTermObject status: name: status description: The status of the model from_schema: https://w3id.org/gocam aliases: - model state rank: 1000 slot_uri: pav:status alias: status owner: Model domain_of: - Model range: ModelStateEnum comments: name: comments description: Comments about the model from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:comment multivalued: true alias: comments owner: Model domain_of: - Model range: string activities: name: activities description: All of the activities that are part of the model from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: activities owner: Model domain_of: - Model range: Activity inlined_as_list: true objects: name: objects description: All of the objects that are part of the model. This includes terms as well as publications and database objects like gene. This is not strictly part of the data managed by the model, it is for convenience, and should be refreshed from outside. from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: objects owner: Model domain_of: - Model range: Object inlined_as_list: true provenances: name: provenances description: Model-level provenance information from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: provenances owner: Model domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined_as_list: true","title":"Induced"},{"location":"ModelStateEnum/","text":"Enum: ModelStateEnum Status of a model URI: ModelStateEnum Permissible Values Value Meaning Description production None development None Slots Name Description status The status of the model Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam LinkML Source name: ModelStateEnum description: Status of a model from_schema: https://w3id.org/gocam rank: 1000 permissible_values: production: text: production development: text: development","title":"Enum: ModelStateEnum"},{"location":"ModelStateEnum/#enum-modelstateenum","text":"Status of a model URI: ModelStateEnum","title":"Enum: ModelStateEnum"},{"location":"ModelStateEnum/#permissible-values","text":"Value Meaning Description production None development None","title":"Permissible Values"},{"location":"ModelStateEnum/#slots","text":"Name Description status The status of the model","title":"Slots"},{"location":"ModelStateEnum/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"ModelStateEnum/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"ModelStateEnum/#linkml-source","text":"name: ModelStateEnum description: Status of a model from_schema: https://w3id.org/gocam rank: 1000 permissible_values: production: text: production development: text: development","title":"LinkML Source"},{"location":"MolecularFunctionAssociation/","text":"Class: MolecularFunctionAssociation An association between an activity and a molecular function term URI: gocam:MolecularFunctionAssociation classDiagram class MolecularFunctionAssociation click MolecularFunctionAssociation href \"../MolecularFunctionAssociation\" TermAssociation <|-- MolecularFunctionAssociation click TermAssociation href \"../TermAssociation\" MolecularFunctionAssociation : evidence MolecularFunctionAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" MolecularFunctionAssociation : provenances MolecularFunctionAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" MolecularFunctionAssociation : term MolecularFunctionAssociation --> \"0..1\" MolecularFunctionTermObject : term click MolecularFunctionTermObject href \"../MolecularFunctionTermObject\" MolecularFunctionAssociation : type Inheritance Association TermAssociation MolecularFunctionAssociation Slots Name Cardinality and Range Description Inheritance term 0..1 MolecularFunctionTermObject The ontology term that describes the nature of the association TermAssociation type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association Usages used by used in type used Activity molecular_function range MolecularFunctionAssociation TODOs account for non-MF activity types in Reactome Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:MolecularFunctionAssociation native gocam:MolecularFunctionAssociation LinkML Source Direct name: MolecularFunctionAssociation description: An association between an activity and a molecular function term todos: - account for non-MF activity types in Reactome from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: MolecularFunctionTermObject Induced name: MolecularFunctionAssociation description: An association between an activity and a molecular function term todos: - account for non-MF activity types in Reactome from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: MolecularFunctionTermObject attributes: term: name: term description: The ontology term that describes the nature of the association from_schema: https://w3id.org/gocam alias: term owner: MolecularFunctionAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: MolecularFunctionTermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: MolecularFunctionAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: MolecularFunctionAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: MolecularFunctionAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Class: MolecularFunctionAssociation"},{"location":"MolecularFunctionAssociation/#class-molecularfunctionassociation","text":"An association between an activity and a molecular function term URI: gocam:MolecularFunctionAssociation classDiagram class MolecularFunctionAssociation click MolecularFunctionAssociation href \"../MolecularFunctionAssociation\" TermAssociation <|-- MolecularFunctionAssociation click TermAssociation href \"../TermAssociation\" MolecularFunctionAssociation : evidence MolecularFunctionAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" MolecularFunctionAssociation : provenances MolecularFunctionAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" MolecularFunctionAssociation : term MolecularFunctionAssociation --> \"0..1\" MolecularFunctionTermObject : term click MolecularFunctionTermObject href \"../MolecularFunctionTermObject\" MolecularFunctionAssociation : type","title":"Class: MolecularFunctionAssociation"},{"location":"MolecularFunctionAssociation/#inheritance","text":"Association TermAssociation MolecularFunctionAssociation","title":"Inheritance"},{"location":"MolecularFunctionAssociation/#slots","text":"Name Cardinality and Range Description Inheritance term 0..1 MolecularFunctionTermObject The ontology term that describes the nature of the association TermAssociation type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association","title":"Slots"},{"location":"MolecularFunctionAssociation/#usages","text":"used by used in type used Activity molecular_function range MolecularFunctionAssociation","title":"Usages"},{"location":"MolecularFunctionAssociation/#todos","text":"account for non-MF activity types in Reactome","title":"TODOs"},{"location":"MolecularFunctionAssociation/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"MolecularFunctionAssociation/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"MolecularFunctionAssociation/#mappings","text":"Mapping Type Mapped Value self gocam:MolecularFunctionAssociation native gocam:MolecularFunctionAssociation","title":"Mappings"},{"location":"MolecularFunctionAssociation/#linkml-source","text":"","title":"LinkML Source"},{"location":"MolecularFunctionAssociation/#direct","text":"name: MolecularFunctionAssociation description: An association between an activity and a molecular function term todos: - account for non-MF activity types in Reactome from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: MolecularFunctionTermObject","title":"Direct"},{"location":"MolecularFunctionAssociation/#induced","text":"name: MolecularFunctionAssociation description: An association between an activity and a molecular function term todos: - account for non-MF activity types in Reactome from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: MolecularFunctionTermObject attributes: term: name: term description: The ontology term that describes the nature of the association from_schema: https://w3id.org/gocam alias: term owner: MolecularFunctionAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: MolecularFunctionTermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: MolecularFunctionAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: MolecularFunctionAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: MolecularFunctionAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Induced"},{"location":"MolecularFunctionTermObject/","text":"Class: MolecularFunctionTermObject A term object that represents a molecular function term from GO URI: gocam:MolecularFunctionTermObject classDiagram class MolecularFunctionTermObject click MolecularFunctionTermObject href \"../MolecularFunctionTermObject\" TermObject <|-- MolecularFunctionTermObject click TermObject href \"../TermObject\" MolecularFunctionTermObject : id MolecularFunctionTermObject : label MolecularFunctionTermObject : obsolete MolecularFunctionTermObject : type Inheritance Object TermObject MolecularFunctionTermObject Slots Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object Usages used by used in type used MolecularFunctionAssociation term range MolecularFunctionTermObject Identifier and Mapping Information Valid ID Prefixes Instances of this class should have identifiers with one of the following prefixes: GO Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:MolecularFunctionTermObject native gocam:MolecularFunctionTermObject LinkML Source Direct name: MolecularFunctionTermObject id_prefixes: - GO description: A term object that represents a molecular function term from GO from_schema: https://w3id.org/gocam is_a: TermObject Induced name: MolecularFunctionTermObject id_prefixes: - GO description: A term object that represents a molecular function term from GO from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: MolecularFunctionTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: MolecularFunctionTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: MolecularFunctionTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: MolecularFunctionTermObject domain_of: - Object range: boolean","title":"Class: MolecularFunctionTermObject"},{"location":"MolecularFunctionTermObject/#class-molecularfunctiontermobject","text":"A term object that represents a molecular function term from GO URI: gocam:MolecularFunctionTermObject classDiagram class MolecularFunctionTermObject click MolecularFunctionTermObject href \"../MolecularFunctionTermObject\" TermObject <|-- MolecularFunctionTermObject click TermObject href \"../TermObject\" MolecularFunctionTermObject : id MolecularFunctionTermObject : label MolecularFunctionTermObject : obsolete MolecularFunctionTermObject : type","title":"Class: MolecularFunctionTermObject"},{"location":"MolecularFunctionTermObject/#inheritance","text":"Object TermObject MolecularFunctionTermObject","title":"Inheritance"},{"location":"MolecularFunctionTermObject/#slots","text":"Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object","title":"Slots"},{"location":"MolecularFunctionTermObject/#usages","text":"used by used in type used MolecularFunctionAssociation term range MolecularFunctionTermObject","title":"Usages"},{"location":"MolecularFunctionTermObject/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"MolecularFunctionTermObject/#valid-id-prefixes","text":"Instances of this class should have identifiers with one of the following prefixes: GO","title":"Valid ID Prefixes"},{"location":"MolecularFunctionTermObject/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"MolecularFunctionTermObject/#mappings","text":"Mapping Type Mapped Value self gocam:MolecularFunctionTermObject native gocam:MolecularFunctionTermObject","title":"Mappings"},{"location":"MolecularFunctionTermObject/#linkml-source","text":"","title":"LinkML Source"},{"location":"MolecularFunctionTermObject/#direct","text":"name: MolecularFunctionTermObject id_prefixes: - GO description: A term object that represents a molecular function term from GO from_schema: https://w3id.org/gocam is_a: TermObject","title":"Direct"},{"location":"MolecularFunctionTermObject/#induced","text":"name: MolecularFunctionTermObject id_prefixes: - GO description: A term object that represents a molecular function term from GO from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: MolecularFunctionTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: MolecularFunctionTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: MolecularFunctionTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: MolecularFunctionTermObject domain_of: - Object range: boolean","title":"Induced"},{"location":"MoleculeAssociation/","text":"Class: MoleculeAssociation An association between an activity and a molecule term URI: gocam:MoleculeAssociation classDiagram class MoleculeAssociation click MoleculeAssociation href \"../MoleculeAssociation\" TermAssociation <|-- MoleculeAssociation click TermAssociation href \"../TermAssociation\" MoleculeAssociation : evidence MoleculeAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" MoleculeAssociation : provenances MoleculeAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" MoleculeAssociation : term MoleculeAssociation --> \"0..1\" MoleculeTermObject : term click MoleculeTermObject href \"../MoleculeTermObject\" MoleculeAssociation : type Inheritance Association TermAssociation MoleculeAssociation Slots Name Cardinality and Range Description Inheritance term 0..1 MoleculeTermObject The ontology term that describes the nature of the association TermAssociation type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association Usages used by used in type used Activity has_direct_input range MoleculeAssociation Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:MoleculeAssociation native gocam:MoleculeAssociation LinkML Source Direct name: MoleculeAssociation description: An association between an activity and a molecule term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: MoleculeTermObject Induced name: MoleculeAssociation description: An association between an activity and a molecule term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: MoleculeTermObject attributes: term: name: term description: The ontology term that describes the nature of the association from_schema: https://w3id.org/gocam alias: term owner: MoleculeAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: MoleculeTermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: MoleculeAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: MoleculeAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: MoleculeAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Class: MoleculeAssociation"},{"location":"MoleculeAssociation/#class-moleculeassociation","text":"An association between an activity and a molecule term URI: gocam:MoleculeAssociation classDiagram class MoleculeAssociation click MoleculeAssociation href \"../MoleculeAssociation\" TermAssociation <|-- MoleculeAssociation click TermAssociation href \"../TermAssociation\" MoleculeAssociation : evidence MoleculeAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" MoleculeAssociation : provenances MoleculeAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" MoleculeAssociation : term MoleculeAssociation --> \"0..1\" MoleculeTermObject : term click MoleculeTermObject href \"../MoleculeTermObject\" MoleculeAssociation : type","title":"Class: MoleculeAssociation"},{"location":"MoleculeAssociation/#inheritance","text":"Association TermAssociation MoleculeAssociation","title":"Inheritance"},{"location":"MoleculeAssociation/#slots","text":"Name Cardinality and Range Description Inheritance term 0..1 MoleculeTermObject The ontology term that describes the nature of the association TermAssociation type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association","title":"Slots"},{"location":"MoleculeAssociation/#usages","text":"used by used in type used Activity has_direct_input range MoleculeAssociation","title":"Usages"},{"location":"MoleculeAssociation/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"MoleculeAssociation/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"MoleculeAssociation/#mappings","text":"Mapping Type Mapped Value self gocam:MoleculeAssociation native gocam:MoleculeAssociation","title":"Mappings"},{"location":"MoleculeAssociation/#linkml-source","text":"","title":"LinkML Source"},{"location":"MoleculeAssociation/#direct","text":"name: MoleculeAssociation description: An association between an activity and a molecule term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: MoleculeTermObject","title":"Direct"},{"location":"MoleculeAssociation/#induced","text":"name: MoleculeAssociation description: An association between an activity and a molecule term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: MoleculeTermObject attributes: term: name: term description: The ontology term that describes the nature of the association from_schema: https://w3id.org/gocam alias: term owner: MoleculeAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: MoleculeTermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: MoleculeAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: MoleculeAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: MoleculeAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Induced"},{"location":"MoleculeTermObject/","text":"Class: MoleculeTermObject A term object that represents a molecule term from CHEBI or UniProtKB URI: gocam:MoleculeTermObject classDiagram class MoleculeTermObject click MoleculeTermObject href \"../MoleculeTermObject\" TermObject <|-- MoleculeTermObject click TermObject href \"../TermObject\" MoleculeTermObject : id MoleculeTermObject : label MoleculeTermObject : obsolete MoleculeTermObject : type Inheritance Object TermObject MoleculeTermObject Slots Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object Usages used by used in type used MoleculeAssociation term range MoleculeTermObject Identifier and Mapping Information Valid ID Prefixes Instances of this class should have identifiers with one of the following prefixes: CHEBI UniProtKB Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:MoleculeTermObject native gocam:MoleculeTermObject LinkML Source Direct name: MoleculeTermObject id_prefixes: - CHEBI - UniProtKB description: A term object that represents a molecule term from CHEBI or UniProtKB from_schema: https://w3id.org/gocam is_a: TermObject Induced name: MoleculeTermObject id_prefixes: - CHEBI - UniProtKB description: A term object that represents a molecule term from CHEBI or UniProtKB from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: MoleculeTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: MoleculeTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: MoleculeTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: MoleculeTermObject domain_of: - Object range: boolean","title":"Class: MoleculeTermObject"},{"location":"MoleculeTermObject/#class-moleculetermobject","text":"A term object that represents a molecule term from CHEBI or UniProtKB URI: gocam:MoleculeTermObject classDiagram class MoleculeTermObject click MoleculeTermObject href \"../MoleculeTermObject\" TermObject <|-- MoleculeTermObject click TermObject href \"../TermObject\" MoleculeTermObject : id MoleculeTermObject : label MoleculeTermObject : obsolete MoleculeTermObject : type","title":"Class: MoleculeTermObject"},{"location":"MoleculeTermObject/#inheritance","text":"Object TermObject MoleculeTermObject","title":"Inheritance"},{"location":"MoleculeTermObject/#slots","text":"Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object","title":"Slots"},{"location":"MoleculeTermObject/#usages","text":"used by used in type used MoleculeAssociation term range MoleculeTermObject","title":"Usages"},{"location":"MoleculeTermObject/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"MoleculeTermObject/#valid-id-prefixes","text":"Instances of this class should have identifiers with one of the following prefixes: CHEBI UniProtKB","title":"Valid ID Prefixes"},{"location":"MoleculeTermObject/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"MoleculeTermObject/#mappings","text":"Mapping Type Mapped Value self gocam:MoleculeTermObject native gocam:MoleculeTermObject","title":"Mappings"},{"location":"MoleculeTermObject/#linkml-source","text":"","title":"LinkML Source"},{"location":"MoleculeTermObject/#direct","text":"name: MoleculeTermObject id_prefixes: - CHEBI - UniProtKB description: A term object that represents a molecule term from CHEBI or UniProtKB from_schema: https://w3id.org/gocam is_a: TermObject","title":"Direct"},{"location":"MoleculeTermObject/#induced","text":"name: MoleculeTermObject id_prefixes: - CHEBI - UniProtKB description: A term object that represents a molecule term from CHEBI or UniProtKB from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: MoleculeTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: MoleculeTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: MoleculeTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: MoleculeTermObject domain_of: - Object range: boolean","title":"Induced"},{"location":"Ncname/","text":"Type: Ncname Prefix part of CURIE URI: xsd:string base : NCName uri : xsd:string repr : str Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam","title":"Type: Ncname"},{"location":"Ncname/#type-ncname","text":"Prefix part of CURIE URI: xsd:string base : NCName uri : xsd:string repr : str","title":"Type: Ncname"},{"location":"Ncname/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Ncname/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"Nodeidentifier/","text":"Type: Nodeidentifier A URI, CURIE or BNODE that represents a node in a model. URI: shex:nonLiteral base : NodeIdentifier uri : shex:nonLiteral repr : str Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam","title":"Type: Nodeidentifier"},{"location":"Nodeidentifier/#type-nodeidentifier","text":"A URI, CURIE or BNODE that represents a node in a model. URI: shex:nonLiteral base : NodeIdentifier uri : shex:nonLiteral repr : str","title":"Type: Nodeidentifier"},{"location":"Nodeidentifier/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Nodeidentifier/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"Object/","text":"Class: Object An abstract class for all identified objects in a model URI: gocam:Object classDiagram class Object click Object href \"../Object\" Object <|-- TermObject click TermObject href \"../TermObject\" Object <|-- PublicationObject click PublicationObject href \"../PublicationObject\" Object : id Object : label Object : obsolete Object : type Inheritance Object TermObject PublicationObject Slots Name Cardinality and Range Description Inheritance id 1 Uriorcurie direct label 0..1 String direct type 0..1 Uriorcurie direct obsolete 0..1 Boolean direct Usages used by used in type used Model objects range Object EvidenceItem with_objects range Object Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:Object native gocam:Object LinkML Source Direct name: Object description: An abstract class for all identified objects in a model from_schema: https://w3id.org/gocam attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label domain_of: - Object type: name: type from_schema: https://w3id.org/gocam designates_type: true domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 domain_of: - Object range: boolean Induced name: Object description: An abstract class for all identified objects in a model from_schema: https://w3id.org/gocam attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: Object domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: Object domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: Object domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: Object domain_of: - Object range: boolean","title":"Class: Object"},{"location":"Object/#class-object","text":"An abstract class for all identified objects in a model URI: gocam:Object classDiagram class Object click Object href \"../Object\" Object <|-- TermObject click TermObject href \"../TermObject\" Object <|-- PublicationObject click PublicationObject href \"../PublicationObject\" Object : id Object : label Object : obsolete Object : type","title":"Class: Object"},{"location":"Object/#inheritance","text":"Object TermObject PublicationObject","title":"Inheritance"},{"location":"Object/#slots","text":"Name Cardinality and Range Description Inheritance id 1 Uriorcurie direct label 0..1 String direct type 0..1 Uriorcurie direct obsolete 0..1 Boolean direct","title":"Slots"},{"location":"Object/#usages","text":"used by used in type used Model objects range Object EvidenceItem with_objects range Object","title":"Usages"},{"location":"Object/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Object/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"Object/#mappings","text":"Mapping Type Mapped Value self gocam:Object native gocam:Object","title":"Mappings"},{"location":"Object/#linkml-source","text":"","title":"LinkML Source"},{"location":"Object/#direct","text":"name: Object description: An abstract class for all identified objects in a model from_schema: https://w3id.org/gocam attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label domain_of: - Object type: name: type from_schema: https://w3id.org/gocam designates_type: true domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 domain_of: - Object range: boolean","title":"Direct"},{"location":"Object/#induced","text":"name: Object description: An abstract class for all identified objects in a model from_schema: https://w3id.org/gocam attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: Object domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: Object domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: Object domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: Object domain_of: - Object range: boolean","title":"Induced"},{"location":"Objectidentifier/","text":"Type: Objectidentifier A URI or CURIE that represents an object in the model. URI: shex:iri base : ElementIdentifier uri : shex:iri repr : str Comments Used for inheritance and type checking Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam","title":"Type: Objectidentifier"},{"location":"Objectidentifier/#type-objectidentifier","text":"A URI or CURIE that represents an object in the model. URI: shex:iri base : ElementIdentifier uri : shex:iri repr : str","title":"Type: Objectidentifier"},{"location":"Objectidentifier/#comments","text":"Used for inheritance and type checking","title":"Comments"},{"location":"Objectidentifier/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Objectidentifier/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"PhaseTermObject/","text":"Class: PhaseTermObject A term object that represents a phase term from GO or UBERON URI: gocam:PhaseTermObject classDiagram class PhaseTermObject click PhaseTermObject href \"../PhaseTermObject\" TermObject <|-- PhaseTermObject click TermObject href \"../TermObject\" PhaseTermObject : id PhaseTermObject : label PhaseTermObject : obsolete PhaseTermObject : type Inheritance Object TermObject PhaseTermObject Slots Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object Identifier and Mapping Information Valid ID Prefixes Instances of this class should have identifiers with one of the following prefixes: GO UBERON PO Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:PhaseTermObject native gocam:PhaseTermObject LinkML Source Direct name: PhaseTermObject id_prefixes: - GO - UBERON - PO description: A term object that represents a phase term from GO or UBERON from_schema: https://w3id.org/gocam is_a: TermObject Induced name: PhaseTermObject id_prefixes: - GO - UBERON - PO description: A term object that represents a phase term from GO or UBERON from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: PhaseTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: PhaseTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: PhaseTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: PhaseTermObject domain_of: - Object range: boolean","title":"Class: PhaseTermObject"},{"location":"PhaseTermObject/#class-phasetermobject","text":"A term object that represents a phase term from GO or UBERON URI: gocam:PhaseTermObject classDiagram class PhaseTermObject click PhaseTermObject href \"../PhaseTermObject\" TermObject <|-- PhaseTermObject click TermObject href \"../TermObject\" PhaseTermObject : id PhaseTermObject : label PhaseTermObject : obsolete PhaseTermObject : type","title":"Class: PhaseTermObject"},{"location":"PhaseTermObject/#inheritance","text":"Object TermObject PhaseTermObject","title":"Inheritance"},{"location":"PhaseTermObject/#slots","text":"Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object","title":"Slots"},{"location":"PhaseTermObject/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"PhaseTermObject/#valid-id-prefixes","text":"Instances of this class should have identifiers with one of the following prefixes: GO UBERON PO","title":"Valid ID Prefixes"},{"location":"PhaseTermObject/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"PhaseTermObject/#mappings","text":"Mapping Type Mapped Value self gocam:PhaseTermObject native gocam:PhaseTermObject","title":"Mappings"},{"location":"PhaseTermObject/#linkml-source","text":"","title":"LinkML Source"},{"location":"PhaseTermObject/#direct","text":"name: PhaseTermObject id_prefixes: - GO - UBERON - PO description: A term object that represents a phase term from GO or UBERON from_schema: https://w3id.org/gocam is_a: TermObject","title":"Direct"},{"location":"PhaseTermObject/#induced","text":"name: PhaseTermObject id_prefixes: - GO - UBERON - PO description: A term object that represents a phase term from GO or UBERON from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: PhaseTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: PhaseTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: PhaseTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: PhaseTermObject domain_of: - Object range: boolean","title":"Induced"},{"location":"PredicateTermObject/","text":"Class: PredicateTermObject A term object that represents a taxon term from NCBITaxon URI: gocam:PredicateTermObject classDiagram class PredicateTermObject click PredicateTermObject href \"../PredicateTermObject\" TermObject <|-- PredicateTermObject click TermObject href \"../TermObject\" PredicateTermObject : id PredicateTermObject : label PredicateTermObject : obsolete PredicateTermObject : type Inheritance Object TermObject PredicateTermObject Slots Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object Usages used by used in type used CausalAssociation predicate range PredicateTermObject Identifier and Mapping Information Valid ID Prefixes Instances of this class should have identifiers with one of the following prefixes: RO Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:PredicateTermObject native gocam:PredicateTermObject LinkML Source Direct name: PredicateTermObject id_prefixes: - RO description: A term object that represents a taxon term from NCBITaxon from_schema: https://w3id.org/gocam is_a: TermObject Induced name: PredicateTermObject id_prefixes: - RO description: A term object that represents a taxon term from NCBITaxon from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: PredicateTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: PredicateTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: PredicateTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: PredicateTermObject domain_of: - Object range: boolean","title":"Class: PredicateTermObject"},{"location":"PredicateTermObject/#class-predicatetermobject","text":"A term object that represents a taxon term from NCBITaxon URI: gocam:PredicateTermObject classDiagram class PredicateTermObject click PredicateTermObject href \"../PredicateTermObject\" TermObject <|-- PredicateTermObject click TermObject href \"../TermObject\" PredicateTermObject : id PredicateTermObject : label PredicateTermObject : obsolete PredicateTermObject : type","title":"Class: PredicateTermObject"},{"location":"PredicateTermObject/#inheritance","text":"Object TermObject PredicateTermObject","title":"Inheritance"},{"location":"PredicateTermObject/#slots","text":"Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object","title":"Slots"},{"location":"PredicateTermObject/#usages","text":"used by used in type used CausalAssociation predicate range PredicateTermObject","title":"Usages"},{"location":"PredicateTermObject/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"PredicateTermObject/#valid-id-prefixes","text":"Instances of this class should have identifiers with one of the following prefixes: RO","title":"Valid ID Prefixes"},{"location":"PredicateTermObject/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"PredicateTermObject/#mappings","text":"Mapping Type Mapped Value self gocam:PredicateTermObject native gocam:PredicateTermObject","title":"Mappings"},{"location":"PredicateTermObject/#linkml-source","text":"","title":"LinkML Source"},{"location":"PredicateTermObject/#direct","text":"name: PredicateTermObject id_prefixes: - RO description: A term object that represents a taxon term from NCBITaxon from_schema: https://w3id.org/gocam is_a: TermObject","title":"Direct"},{"location":"PredicateTermObject/#induced","text":"name: PredicateTermObject id_prefixes: - RO description: A term object that represents a taxon term from NCBITaxon from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: PredicateTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: PredicateTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: PredicateTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: PredicateTermObject domain_of: - Object range: boolean","title":"Induced"},{"location":"ProteinComplexTermObject/","text":"Class: ProteinComplexTermObject A term object that represents a protein complex term from GO URI: gocam:ProteinComplexTermObject classDiagram class ProteinComplexTermObject click ProteinComplexTermObject href \"../ProteinComplexTermObject\" InformationBiomacromoleculeTermObject <|-- ProteinComplexTermObject click InformationBiomacromoleculeTermObject href \"../InformationBiomacromoleculeTermObject\" ProteinComplexTermObject : id ProteinComplexTermObject : label ProteinComplexTermObject : obsolete ProteinComplexTermObject : type Inheritance Object TermObject InformationBiomacromoleculeTermObject ProteinComplexTermObject Slots Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object Usages used by used in type used EnabledByProteinComplexAssociation term range ProteinComplexTermObject Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:ProteinComplexTermObject native gocam:ProteinComplexTermObject LinkML Source Direct name: ProteinComplexTermObject description: A term object that represents a protein complex term from GO from_schema: https://w3id.org/gocam is_a: InformationBiomacromoleculeTermObject Induced name: ProteinComplexTermObject description: A term object that represents a protein complex term from GO from_schema: https://w3id.org/gocam is_a: InformationBiomacromoleculeTermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: ProteinComplexTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: ProteinComplexTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: ProteinComplexTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: ProteinComplexTermObject domain_of: - Object range: boolean","title":"Class: ProteinComplexTermObject"},{"location":"ProteinComplexTermObject/#class-proteincomplextermobject","text":"A term object that represents a protein complex term from GO URI: gocam:ProteinComplexTermObject classDiagram class ProteinComplexTermObject click ProteinComplexTermObject href \"../ProteinComplexTermObject\" InformationBiomacromoleculeTermObject <|-- ProteinComplexTermObject click InformationBiomacromoleculeTermObject href \"../InformationBiomacromoleculeTermObject\" ProteinComplexTermObject : id ProteinComplexTermObject : label ProteinComplexTermObject : obsolete ProteinComplexTermObject : type","title":"Class: ProteinComplexTermObject"},{"location":"ProteinComplexTermObject/#inheritance","text":"Object TermObject InformationBiomacromoleculeTermObject ProteinComplexTermObject","title":"Inheritance"},{"location":"ProteinComplexTermObject/#slots","text":"Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object","title":"Slots"},{"location":"ProteinComplexTermObject/#usages","text":"used by used in type used EnabledByProteinComplexAssociation term range ProteinComplexTermObject","title":"Usages"},{"location":"ProteinComplexTermObject/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"ProteinComplexTermObject/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"ProteinComplexTermObject/#mappings","text":"Mapping Type Mapped Value self gocam:ProteinComplexTermObject native gocam:ProteinComplexTermObject","title":"Mappings"},{"location":"ProteinComplexTermObject/#linkml-source","text":"","title":"LinkML Source"},{"location":"ProteinComplexTermObject/#direct","text":"name: ProteinComplexTermObject description: A term object that represents a protein complex term from GO from_schema: https://w3id.org/gocam is_a: InformationBiomacromoleculeTermObject","title":"Direct"},{"location":"ProteinComplexTermObject/#induced","text":"name: ProteinComplexTermObject description: A term object that represents a protein complex term from GO from_schema: https://w3id.org/gocam is_a: InformationBiomacromoleculeTermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: ProteinComplexTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: ProteinComplexTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: ProteinComplexTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: ProteinComplexTermObject domain_of: - Object range: boolean","title":"Induced"},{"location":"ProvenanceInfo/","text":"Class: ProvenanceInfo Provenance information for an object URI: gocam:ProvenanceInfo classDiagram class ProvenanceInfo click ProvenanceInfo href \"../ProvenanceInfo\" ProvenanceInfo : contributor ProvenanceInfo : created ProvenanceInfo : date ProvenanceInfo : provided_by Slots Name Cardinality and Range Description Inheritance contributor 0..1 String direct created 0..1 String direct date 0..1 String direct provided_by 0..1 String direct Usages used by used in type used Model provenances range ProvenanceInfo Activity provenances range ProvenanceInfo EvidenceItem provenances range ProvenanceInfo Association provenances range ProvenanceInfo EnabledByAssociation provenances range ProvenanceInfo EnabledByGeneProductAssociation provenances range ProvenanceInfo EnabledByProteinComplexAssociation provenances range ProvenanceInfo CausalAssociation provenances range ProvenanceInfo TermAssociation provenances range ProvenanceInfo MolecularFunctionAssociation provenances range ProvenanceInfo BiologicalProcessAssociation provenances range ProvenanceInfo CellularAnatomicalEntityAssociation provenances range ProvenanceInfo CellTypeAssociation provenances range ProvenanceInfo GrossAnatomyAssociation provenances range ProvenanceInfo MoleculeAssociation provenances range ProvenanceInfo Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:ProvenanceInfo native gocam:ProvenanceInfo LinkML Source Direct name: ProvenanceInfo description: Provenance information for an object from_schema: https://w3id.org/gocam attributes: contributor: name: contributor from_schema: https://w3id.org/gocam rank: 1000 slot_uri: dct:contributor domain_of: - ProvenanceInfo created: name: created from_schema: https://w3id.org/gocam rank: 1000 slot_uri: dct:created domain_of: - ProvenanceInfo date: name: date from_schema: https://w3id.org/gocam rank: 1000 slot_uri: dct:date domain_of: - ProvenanceInfo provided_by: name: provided_by from_schema: https://w3id.org/gocam rank: 1000 slot_uri: pav:providedBy domain_of: - ProvenanceInfo Induced name: ProvenanceInfo description: Provenance information for an object from_schema: https://w3id.org/gocam attributes: contributor: name: contributor from_schema: https://w3id.org/gocam rank: 1000 slot_uri: dct:contributor alias: contributor owner: ProvenanceInfo domain_of: - ProvenanceInfo range: string created: name: created from_schema: https://w3id.org/gocam rank: 1000 slot_uri: dct:created alias: created owner: ProvenanceInfo domain_of: - ProvenanceInfo range: string date: name: date from_schema: https://w3id.org/gocam rank: 1000 slot_uri: dct:date alias: date owner: ProvenanceInfo domain_of: - ProvenanceInfo range: string provided_by: name: provided_by from_schema: https://w3id.org/gocam rank: 1000 slot_uri: pav:providedBy alias: provided_by owner: ProvenanceInfo domain_of: - ProvenanceInfo range: string","title":"Class: ProvenanceInfo"},{"location":"ProvenanceInfo/#class-provenanceinfo","text":"Provenance information for an object URI: gocam:ProvenanceInfo classDiagram class ProvenanceInfo click ProvenanceInfo href \"../ProvenanceInfo\" ProvenanceInfo : contributor ProvenanceInfo : created ProvenanceInfo : date ProvenanceInfo : provided_by","title":"Class: ProvenanceInfo"},{"location":"ProvenanceInfo/#slots","text":"Name Cardinality and Range Description Inheritance contributor 0..1 String direct created 0..1 String direct date 0..1 String direct provided_by 0..1 String direct","title":"Slots"},{"location":"ProvenanceInfo/#usages","text":"used by used in type used Model provenances range ProvenanceInfo Activity provenances range ProvenanceInfo EvidenceItem provenances range ProvenanceInfo Association provenances range ProvenanceInfo EnabledByAssociation provenances range ProvenanceInfo EnabledByGeneProductAssociation provenances range ProvenanceInfo EnabledByProteinComplexAssociation provenances range ProvenanceInfo CausalAssociation provenances range ProvenanceInfo TermAssociation provenances range ProvenanceInfo MolecularFunctionAssociation provenances range ProvenanceInfo BiologicalProcessAssociation provenances range ProvenanceInfo CellularAnatomicalEntityAssociation provenances range ProvenanceInfo CellTypeAssociation provenances range ProvenanceInfo GrossAnatomyAssociation provenances range ProvenanceInfo MoleculeAssociation provenances range ProvenanceInfo","title":"Usages"},{"location":"ProvenanceInfo/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"ProvenanceInfo/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"ProvenanceInfo/#mappings","text":"Mapping Type Mapped Value self gocam:ProvenanceInfo native gocam:ProvenanceInfo","title":"Mappings"},{"location":"ProvenanceInfo/#linkml-source","text":"","title":"LinkML Source"},{"location":"ProvenanceInfo/#direct","text":"name: ProvenanceInfo description: Provenance information for an object from_schema: https://w3id.org/gocam attributes: contributor: name: contributor from_schema: https://w3id.org/gocam rank: 1000 slot_uri: dct:contributor domain_of: - ProvenanceInfo created: name: created from_schema: https://w3id.org/gocam rank: 1000 slot_uri: dct:created domain_of: - ProvenanceInfo date: name: date from_schema: https://w3id.org/gocam rank: 1000 slot_uri: dct:date domain_of: - ProvenanceInfo provided_by: name: provided_by from_schema: https://w3id.org/gocam rank: 1000 slot_uri: pav:providedBy domain_of: - ProvenanceInfo","title":"Direct"},{"location":"ProvenanceInfo/#induced","text":"name: ProvenanceInfo description: Provenance information for an object from_schema: https://w3id.org/gocam attributes: contributor: name: contributor from_schema: https://w3id.org/gocam rank: 1000 slot_uri: dct:contributor alias: contributor owner: ProvenanceInfo domain_of: - ProvenanceInfo range: string created: name: created from_schema: https://w3id.org/gocam rank: 1000 slot_uri: dct:created alias: created owner: ProvenanceInfo domain_of: - ProvenanceInfo range: string date: name: date from_schema: https://w3id.org/gocam rank: 1000 slot_uri: dct:date alias: date owner: ProvenanceInfo domain_of: - ProvenanceInfo range: string provided_by: name: provided_by from_schema: https://w3id.org/gocam rank: 1000 slot_uri: pav:providedBy alias: provided_by owner: ProvenanceInfo domain_of: - ProvenanceInfo range: string","title":"Induced"},{"location":"PublicationObject/","text":"Class: PublicationObject An object that represents a publication or other kind of reference URI: gocam:PublicationObject classDiagram class PublicationObject click PublicationObject href \"../PublicationObject\" Object <|-- PublicationObject click Object href \"../Object\" PublicationObject : abstract_text PublicationObject : full_text PublicationObject : id PublicationObject : label PublicationObject : obsolete PublicationObject : type Inheritance Object PublicationObject Slots Name Cardinality and Range Description Inheritance abstract_text 0..1 String direct full_text 0..1 String direct id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object Usages used by used in type used EvidenceItem reference range PublicationObject Identifier and Mapping Information Valid ID Prefixes Instances of this class should have identifiers with one of the following prefixes: PMID GOREF DOI Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:PublicationObject native gocam:PublicationObject LinkML Source Direct name: PublicationObject id_prefixes: - PMID - GOREF - DOI description: An object that represents a publication or other kind of reference from_schema: https://w3id.org/gocam is_a: Object attributes: abstract_text: name: abstract_text from_schema: https://w3id.org/gocam rank: 1000 domain_of: - PublicationObject full_text: name: full_text from_schema: https://w3id.org/gocam rank: 1000 domain_of: - PublicationObject Induced name: PublicationObject id_prefixes: - PMID - GOREF - DOI description: An object that represents a publication or other kind of reference from_schema: https://w3id.org/gocam is_a: Object attributes: abstract_text: name: abstract_text from_schema: https://w3id.org/gocam rank: 1000 alias: abstract_text owner: PublicationObject domain_of: - PublicationObject range: string full_text: name: full_text from_schema: https://w3id.org/gocam rank: 1000 alias: full_text owner: PublicationObject domain_of: - PublicationObject range: string id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: PublicationObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: PublicationObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: PublicationObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: PublicationObject domain_of: - Object range: boolean","title":"Class: PublicationObject"},{"location":"PublicationObject/#class-publicationobject","text":"An object that represents a publication or other kind of reference URI: gocam:PublicationObject classDiagram class PublicationObject click PublicationObject href \"../PublicationObject\" Object <|-- PublicationObject click Object href \"../Object\" PublicationObject : abstract_text PublicationObject : full_text PublicationObject : id PublicationObject : label PublicationObject : obsolete PublicationObject : type","title":"Class: PublicationObject"},{"location":"PublicationObject/#inheritance","text":"Object PublicationObject","title":"Inheritance"},{"location":"PublicationObject/#slots","text":"Name Cardinality and Range Description Inheritance abstract_text 0..1 String direct full_text 0..1 String direct id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object","title":"Slots"},{"location":"PublicationObject/#usages","text":"used by used in type used EvidenceItem reference range PublicationObject","title":"Usages"},{"location":"PublicationObject/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"PublicationObject/#valid-id-prefixes","text":"Instances of this class should have identifiers with one of the following prefixes: PMID GOREF DOI","title":"Valid ID Prefixes"},{"location":"PublicationObject/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"PublicationObject/#mappings","text":"Mapping Type Mapped Value self gocam:PublicationObject native gocam:PublicationObject","title":"Mappings"},{"location":"PublicationObject/#linkml-source","text":"","title":"LinkML Source"},{"location":"PublicationObject/#direct","text":"name: PublicationObject id_prefixes: - PMID - GOREF - DOI description: An object that represents a publication or other kind of reference from_schema: https://w3id.org/gocam is_a: Object attributes: abstract_text: name: abstract_text from_schema: https://w3id.org/gocam rank: 1000 domain_of: - PublicationObject full_text: name: full_text from_schema: https://w3id.org/gocam rank: 1000 domain_of: - PublicationObject","title":"Direct"},{"location":"PublicationObject/#induced","text":"name: PublicationObject id_prefixes: - PMID - GOREF - DOI description: An object that represents a publication or other kind of reference from_schema: https://w3id.org/gocam is_a: Object attributes: abstract_text: name: abstract_text from_schema: https://w3id.org/gocam rank: 1000 alias: abstract_text owner: PublicationObject domain_of: - PublicationObject range: string full_text: name: full_text from_schema: https://w3id.org/gocam rank: 1000 alias: full_text owner: PublicationObject domain_of: - PublicationObject range: string id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: PublicationObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: PublicationObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: PublicationObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: PublicationObject domain_of: - Object range: boolean","title":"Induced"},{"location":"Sparqlpath/","text":"Type: Sparqlpath A string encoding a SPARQL Property Path. The value of the string MUST conform to SPARQL syntax and SHOULD dereference to zero or more valid objects within the current instance document when encoded as RDF. URI: xsd:string base : str uri : xsd:string repr : str Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam","title":"Type: Sparqlpath"},{"location":"Sparqlpath/#type-sparqlpath","text":"A string encoding a SPARQL Property Path. The value of the string MUST conform to SPARQL syntax and SHOULD dereference to zero or more valid objects within the current instance document when encoded as RDF. URI: xsd:string base : str uri : xsd:string repr : str","title":"Type: Sparqlpath"},{"location":"Sparqlpath/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Sparqlpath/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"String/","text":"Type: String A character string URI: xsd:string base : str uri : xsd:string Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam","title":"Type: String"},{"location":"String/#type-string","text":"A character string URI: xsd:string base : str uri : xsd:string","title":"Type: String"},{"location":"String/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"String/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"TaxonTermObject/","text":"Class: TaxonTermObject A term object that represents a taxon term from NCBITaxon URI: gocam:TaxonTermObject classDiagram class TaxonTermObject click TaxonTermObject href \"../TaxonTermObject\" TermObject <|-- TaxonTermObject click TermObject href \"../TermObject\" TaxonTermObject : id TaxonTermObject : label TaxonTermObject : obsolete TaxonTermObject : type Inheritance Object TermObject TaxonTermObject Slots Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object Usages used by used in type used Model taxon range TaxonTermObject Identifier and Mapping Information Valid ID Prefixes Instances of this class should have identifiers with one of the following prefixes: NCBITaxon Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:TaxonTermObject native gocam:TaxonTermObject LinkML Source Direct name: TaxonTermObject id_prefixes: - NCBITaxon description: A term object that represents a taxon term from NCBITaxon from_schema: https://w3id.org/gocam is_a: TermObject Induced name: TaxonTermObject id_prefixes: - NCBITaxon description: A term object that represents a taxon term from NCBITaxon from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: TaxonTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: TaxonTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: TaxonTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: TaxonTermObject domain_of: - Object range: boolean","title":"Class: TaxonTermObject"},{"location":"TaxonTermObject/#class-taxontermobject","text":"A term object that represents a taxon term from NCBITaxon URI: gocam:TaxonTermObject classDiagram class TaxonTermObject click TaxonTermObject href \"../TaxonTermObject\" TermObject <|-- TaxonTermObject click TermObject href \"../TermObject\" TaxonTermObject : id TaxonTermObject : label TaxonTermObject : obsolete TaxonTermObject : type","title":"Class: TaxonTermObject"},{"location":"TaxonTermObject/#inheritance","text":"Object TermObject TaxonTermObject","title":"Inheritance"},{"location":"TaxonTermObject/#slots","text":"Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object","title":"Slots"},{"location":"TaxonTermObject/#usages","text":"used by used in type used Model taxon range TaxonTermObject","title":"Usages"},{"location":"TaxonTermObject/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"TaxonTermObject/#valid-id-prefixes","text":"Instances of this class should have identifiers with one of the following prefixes: NCBITaxon","title":"Valid ID Prefixes"},{"location":"TaxonTermObject/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"TaxonTermObject/#mappings","text":"Mapping Type Mapped Value self gocam:TaxonTermObject native gocam:TaxonTermObject","title":"Mappings"},{"location":"TaxonTermObject/#linkml-source","text":"","title":"LinkML Source"},{"location":"TaxonTermObject/#direct","text":"name: TaxonTermObject id_prefixes: - NCBITaxon description: A term object that represents a taxon term from NCBITaxon from_schema: https://w3id.org/gocam is_a: TermObject","title":"Direct"},{"location":"TaxonTermObject/#induced","text":"name: TaxonTermObject id_prefixes: - NCBITaxon description: A term object that represents a taxon term from NCBITaxon from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: TaxonTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: TaxonTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: TaxonTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: TaxonTermObject domain_of: - Object range: boolean","title":"Induced"},{"location":"TermAssociation/","text":"Class: TermAssociation An association between an activity and a term, potentially with extensions NOTE : this is an abstract class and should not be instantiated directly URI: gocam:TermAssociation classDiagram class TermAssociation click TermAssociation href \"../TermAssociation\" Association <|-- TermAssociation click Association href \"../Association\" TermAssociation <|-- MolecularFunctionAssociation click MolecularFunctionAssociation href \"../MolecularFunctionAssociation\" TermAssociation <|-- BiologicalProcessAssociation click BiologicalProcessAssociation href \"../BiologicalProcessAssociation\" TermAssociation <|-- CellularAnatomicalEntityAssociation click CellularAnatomicalEntityAssociation href \"../CellularAnatomicalEntityAssociation\" TermAssociation <|-- CellTypeAssociation click CellTypeAssociation href \"../CellTypeAssociation\" TermAssociation <|-- GrossAnatomyAssociation click GrossAnatomyAssociation href \"../GrossAnatomyAssociation\" TermAssociation <|-- MoleculeAssociation click MoleculeAssociation href \"../MoleculeAssociation\" TermAssociation : evidence TermAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" TermAssociation : provenances TermAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" TermAssociation : term TermAssociation --> \"0..1\" TermObject : term click TermObject href \"../TermObject\" TermAssociation : type Inheritance Association TermAssociation MolecularFunctionAssociation BiologicalProcessAssociation CellularAnatomicalEntityAssociation CellTypeAssociation GrossAnatomyAssociation MoleculeAssociation Slots Name Cardinality and Range Description Inheritance term 0..1 TermObject The ontology term that describes the nature of the association direct type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:TermAssociation native gocam:TermAssociation LinkML Source Direct name: TermAssociation description: An association between an activity and a term, potentially with extensions from_schema: https://w3id.org/gocam is_a: Association abstract: true attributes: term: name: term description: The ontology term that describes the nature of the association from_schema: https://w3id.org/gocam domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: TermObject Induced name: TermAssociation description: An association between an activity and a term, potentially with extensions from_schema: https://w3id.org/gocam is_a: Association abstract: true attributes: term: name: term description: The ontology term that describes the nature of the association from_schema: https://w3id.org/gocam alias: term owner: TermAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: TermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: TermAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: TermAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: TermAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Class: TermAssociation"},{"location":"TermAssociation/#class-termassociation","text":"An association between an activity and a term, potentially with extensions NOTE : this is an abstract class and should not be instantiated directly URI: gocam:TermAssociation classDiagram class TermAssociation click TermAssociation href \"../TermAssociation\" Association <|-- TermAssociation click Association href \"../Association\" TermAssociation <|-- MolecularFunctionAssociation click MolecularFunctionAssociation href \"../MolecularFunctionAssociation\" TermAssociation <|-- BiologicalProcessAssociation click BiologicalProcessAssociation href \"../BiologicalProcessAssociation\" TermAssociation <|-- CellularAnatomicalEntityAssociation click CellularAnatomicalEntityAssociation href \"../CellularAnatomicalEntityAssociation\" TermAssociation <|-- CellTypeAssociation click CellTypeAssociation href \"../CellTypeAssociation\" TermAssociation <|-- GrossAnatomyAssociation click GrossAnatomyAssociation href \"../GrossAnatomyAssociation\" TermAssociation <|-- MoleculeAssociation click MoleculeAssociation href \"../MoleculeAssociation\" TermAssociation : evidence TermAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" TermAssociation : provenances TermAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" TermAssociation : term TermAssociation --> \"0..1\" TermObject : term click TermObject href \"../TermObject\" TermAssociation : type","title":"Class: TermAssociation"},{"location":"TermAssociation/#inheritance","text":"Association TermAssociation MolecularFunctionAssociation BiologicalProcessAssociation CellularAnatomicalEntityAssociation CellTypeAssociation GrossAnatomyAssociation MoleculeAssociation","title":"Inheritance"},{"location":"TermAssociation/#slots","text":"Name Cardinality and Range Description Inheritance term 0..1 TermObject The ontology term that describes the nature of the association direct type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association","title":"Slots"},{"location":"TermAssociation/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"TermAssociation/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"TermAssociation/#mappings","text":"Mapping Type Mapped Value self gocam:TermAssociation native gocam:TermAssociation","title":"Mappings"},{"location":"TermAssociation/#linkml-source","text":"","title":"LinkML Source"},{"location":"TermAssociation/#direct","text":"name: TermAssociation description: An association between an activity and a term, potentially with extensions from_schema: https://w3id.org/gocam is_a: Association abstract: true attributes: term: name: term description: The ontology term that describes the nature of the association from_schema: https://w3id.org/gocam domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: TermObject","title":"Direct"},{"location":"TermAssociation/#induced","text":"name: TermAssociation description: An association between an activity and a term, potentially with extensions from_schema: https://w3id.org/gocam is_a: Association abstract: true attributes: term: name: term description: The ontology term that describes the nature of the association from_schema: https://w3id.org/gocam alias: term owner: TermAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: TermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: TermAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: TermAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: TermAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Induced"},{"location":"TermObject/","text":"Class: TermObject An abstract class for all ontology term objects NOTE : this is an abstract class and should not be instantiated directly URI: gocam:TermObject classDiagram class TermObject click TermObject href \"../TermObject\" Object <|-- TermObject click Object href \"../Object\" TermObject <|-- EvidenceTermObject click EvidenceTermObject href \"../EvidenceTermObject\" TermObject <|-- MolecularFunctionTermObject click MolecularFunctionTermObject href \"../MolecularFunctionTermObject\" TermObject <|-- BiologicalProcessTermObject click BiologicalProcessTermObject href \"../BiologicalProcessTermObject\" TermObject <|-- CellularAnatomicalEntityTermObject click CellularAnatomicalEntityTermObject href \"../CellularAnatomicalEntityTermObject\" TermObject <|-- MoleculeTermObject click MoleculeTermObject href \"../MoleculeTermObject\" TermObject <|-- CellTypeTermObject click CellTypeTermObject href \"../CellTypeTermObject\" TermObject <|-- GrossAnatomicalStructureTermObject click GrossAnatomicalStructureTermObject href \"../GrossAnatomicalStructureTermObject\" TermObject <|-- PhaseTermObject click PhaseTermObject href \"../PhaseTermObject\" TermObject <|-- InformationBiomacromoleculeTermObject click InformationBiomacromoleculeTermObject href \"../InformationBiomacromoleculeTermObject\" TermObject <|-- TaxonTermObject click TaxonTermObject href \"../TaxonTermObject\" TermObject <|-- PredicateTermObject click PredicateTermObject href \"../PredicateTermObject\" TermObject : id TermObject : label TermObject : obsolete TermObject : type Inheritance Object TermObject EvidenceTermObject MolecularFunctionTermObject BiologicalProcessTermObject CellularAnatomicalEntityTermObject MoleculeTermObject CellTypeTermObject GrossAnatomicalStructureTermObject PhaseTermObject InformationBiomacromoleculeTermObject TaxonTermObject PredicateTermObject Slots Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object Usages used by used in type used TermAssociation term range TermObject Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:TermObject native gocam:TermObject LinkML Source Direct name: TermObject description: An abstract class for all ontology term objects from_schema: https://w3id.org/gocam is_a: Object abstract: true Induced name: TermObject description: An abstract class for all ontology term objects from_schema: https://w3id.org/gocam is_a: Object abstract: true attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: TermObject domain_of: - 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This includes terms as well as publications and database objects like gene. This is not strictly part of the data managed by the model, it is for convenience, and should be refreshed from outside. URI: gocam:objects Applicable Classes Name Description Modifies Slot Model A model of a biological program consisting of a set of causally connected act... no Properties Range: Object Multivalued: True Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam LinkML Source name: objects description: All of the objects that are part of the model. This includes terms as well as publications and database objects like gene. 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    The human-readable descriptive title of the model

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    NameDescriptionModifies Slot
    ModelA model of a biological program consisting of a set of causally connected act...no
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    name: title
-description: The human-readable descriptive title of the model
-from_schema: https://w3id.org/gocam
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-slot_uri: dct:title
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-owner: Model
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    URI: gocam:type

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    Applicable Classes

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    NameDescriptionModifies Slot
    InformationBiomacromoleculeTermObjectAn abstract class for all information biomacromolecule term objectsno
    GeneProductTermObjectA term object that represents a gene product term from GO or UniProtKBno
    EnabledByGeneProductAssociationAn association between an activity and a gene productno
    MolecularFunctionTermObjectA term object that represents a molecular function term from GOno
    CellularAnatomicalEntityTermObjectA term object that represents a cellular anatomical entity term from GOno
    BiologicalProcessTermObjectA term object that represents a biological process term from GOno
    BiologicalProcessAssociationAn association between an activity and a biological process termno
    MoleculeTermObjectA term object that represents a molecule term from CHEBI or UniProtKBno
    CellTypeAssociationAn association between an activity and a cell type termno
    PhaseTermObjectA term object that represents a phase term from GO or UBERONno
    EnabledByAssociationAn association between an activity and the gene product or complex that carri...no
    MolecularFunctionAssociationAn association between an activity and a molecular function termno
    CausalAssociationA causal association between two activitiesno
    EnabledByProteinComplexAssociationAn association between an activity and a protein complexno
    ObjectAn abstract class for all identified objects in a modelno
    CellTypeTermObjectA term object that represents a cell type term from CLno
    PredicateTermObjectA term object that represents a taxon term from NCBITaxonno
    CellularAnatomicalEntityAssociationAn association between an activity and a cellular anatomical entity termno
    GrossAnatomyAssociationAn association between an activity and a gross anatomical structure termno
    PublicationObjectAn object that represents a publication or other kind of referenceno
    MoleculeAssociationAn association between an activity and a molecule termno
    TermAssociationAn association between an activity and a term, potentially with extensionsno
    EvidenceTermObjectA term object that represents an evidence term from ECOno
    ProteinComplexTermObjectA term object that represents a protein complex term from GOno
    TaxonTermObjectA term object that represents a taxon term from NCBITaxonno
    AssociationAn abstract grouping for different kinds of evidence-associated provenanceno
    GrossAnatomicalStructureTermObjectA term object that represents a gross anatomical structure term from UBERONno
    TermObjectAn abstract class for all ontology term objectsno
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-domain_of:
-- Association
-- Object
-range: string
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    Supporting database entities or terms

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    URI: gocam:with_objects

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    Applicable Classes

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    NameDescriptionModifies Slot
    EvidenceItemAn individual piece of evidence that is associated with an assertion in a mod...no
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    Properties

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      Range: Object

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      Multivalued: True

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    • with/from
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    Identifier and Mapping Information

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    Schema Source

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    • from schema: https://w3id.org/gocam
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    LinkML Source

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    name: with_objects
-description: Supporting database entities or terms
-from_schema: https://w3id.org/gocam
-aliases:
-- with
-- with/from
-rank: 1000
-multivalued: true
-alias: with_objects
-owner: EvidenceItem
-domain_of:
-- EvidenceItem
-range: Object
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    Class: Activity

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    An individual activity in a causal model, representing the individual molecular activity of a single gene product or complex in the context of a particular model

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    URI: gocam:Activity

    -
    classDiagram - class Activity - click Activity href "../Activity" - Activity : causal_associations - - - - - Activity --> "*" CausalAssociation : causal_associations - click CausalAssociation href "../CausalAssociation" - - - Activity : enabled_by - - - - - Activity --> "0..1" EnabledByAssociation : enabled_by - click EnabledByAssociation href "../EnabledByAssociation" - - - Activity : has_input - - - - - Activity --> "*" MoleculeAssociation : has_input - click MoleculeAssociation href "../MoleculeAssociation" - - - Activity : has_output - - - - - Activity --> "*" MoleculeAssociation : has_output - click MoleculeAssociation href "../MoleculeAssociation" - - - Activity : has_primary_input - - - - - Activity --> "0..1" MoleculeAssociation : has_primary_input - click MoleculeAssociation href "../MoleculeAssociation" - - - Activity : has_primary_output - - - - - Activity --> "0..1" MoleculeAssociation : has_primary_output - click MoleculeAssociation href "../MoleculeAssociation" - - - Activity : id - - Activity : molecular_function - - - - - Activity --> "0..1" MolecularFunctionAssociation : molecular_function - click MolecularFunctionAssociation href "../MolecularFunctionAssociation" - - - Activity : occurs_in - - - - - Activity --> "0..1" CellularAnatomicalEntityAssociation : occurs_in - click CellularAnatomicalEntityAssociation href "../CellularAnatomicalEntityAssociation" - - - Activity : part_of - - - - - Activity --> "0..1" BiologicalProcessAssociation : part_of - click BiologicalProcessAssociation href "../BiologicalProcessAssociation" - - - Activity : provenances - - - - - Activity --> "*" ProvenanceInfo : provenances - click ProvenanceInfo href "../ProvenanceInfo" - - - -
    - -

    Slots

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    NameCardinality and RangeDescriptionInheritance
    id1
    Uriorcurie    		Identifier of the activity unitdirect
    enabled_by0..1
    EnabledByAssociation    		The gene product or complex that carries out the activitydirect
    molecular_function0..1
    MolecularFunctionAssociation    		The molecular function that is carried out by the gene product or complexdirect
    occurs_in0..1
    CellularAnatomicalEntityAssociation    		The cellular location in which the activity occursdirect
    part_of0..1
    BiologicalProcessAssociation    		The larger biological process in which the activity is a partdirect
    has_input*
    MoleculeAssociation    		The input molecules that are directly consumed by the activitydirect
    has_primary_input0..1
    MoleculeAssociation    		The primary input molecule that is directly consumed by the activitydirect
    has_output*
    MoleculeAssociation    		The output molecules that are directly produced by the activitydirect
    has_primary_output0..1
    MoleculeAssociation    		The primary output molecule that is directly produced by the activitydirect
    causal_associations*
    CausalAssociation    		The causal associations that connect this activity to other activitiesdirect
    provenances*
    ProvenanceInfo    		Provenance information for the activitydirect
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    Usages

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    used byused intypeused
    ModelactivitiesrangeActivity
    CausalAssociationdownstream_activityrangeActivity
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    Identifier and Mapping Information

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    Mapping TypeMapped Value
    selfgocam:Activity
    nativegocam:Activity
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    Direct

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    name: Activity
-description: An individual activity in a causal model, representing the individual
-  molecular activity of a single gene product or complex in the context of a particular
-  model
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-aliases:
-- annoton
-attributes:
-  id:
-    name: id
-    description: Identifier of the activity unit. Should be in gocam namespace.
-    comments:
-    - Typically does not need to be exposed to end-user, this exists to allow activity
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-    from_schema: https://w3id.org/gocam
-    identifier: true
-    domain_of:
-    - Model
-    - Activity
-    - Object
-    range: uriorcurie
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-  enabled_by:
-    name: enabled_by
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-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    domain_of:
-    - Activity
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-    inlined: true
-  molecular_function:
-    name: molecular_function
-    description: The molecular function that is carried out by the gene product or
-      complex
-    todos:
-    - currently BP, CC etc are at the level of the activity, not the MolecularFunctionAssociation
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    domain_of:
-    - Activity
-    range: MolecularFunctionAssociation
-    inlined: true
-  occurs_in:
-    name: occurs_in
-    description: The cellular location in which the activity occurs
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    domain_of:
-    - Activity
-    range: CellularAnatomicalEntityAssociation
-    inlined: true
-  part_of:
-    name: part_of
-    description: The larger biological process in which the activity is a part
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    domain_of:
-    - Activity
-    range: BiologicalProcessAssociation
-    inlined: true
-  has_input:
-    name: has_input
-    description: The input molecules that are directly consumed by the activity
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    multivalued: true
-    domain_of:
-    - Activity
-    range: MoleculeAssociation
-    inlined: true
-    inlined_as_list: true
-  has_primary_input:
-    name: has_primary_input
-    description: The primary input molecule that is directly consumed by the activity
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    domain_of:
-    - Activity
-    range: MoleculeAssociation
-    inlined: true
-  has_output:
-    name: has_output
-    description: The output molecules that are directly produced by the activity
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    multivalued: true
-    domain_of:
-    - Activity
-    range: MoleculeAssociation
-    inlined: true
-    inlined_as_list: true
-  has_primary_output:
-    name: has_primary_output
-    description: The primary output molecule that is directly produced by the activity
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    domain_of:
-    - Activity
-    range: MoleculeAssociation
-    inlined: true
-  causal_associations:
-    name: causal_associations
-    description: The causal associations that connect this activity to other activities
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    multivalued: true
-    domain_of:
-    - Activity
-    range: CausalAssociation
-    inlined: true
-    inlined_as_list: true
-  provenances:
-    name: provenances
-    description: Provenance information for the activity
-    from_schema: https://w3id.org/gocam
-    multivalued: true
-    domain_of:
-    - Model
-    - Activity
-    - EvidenceItem
-    - Association
-    range: ProvenanceInfo
-    inlined: true
-    inlined_as_list: true
-
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    -

    Induced

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    name: Activity
-description: An individual activity in a causal model, representing the individual
-  molecular activity of a single gene product or complex in the context of a particular
-  model
-from_schema: https://w3id.org/gocam
-aliases:
-- annoton
-attributes:
-  id:
-    name: id
-    description: Identifier of the activity unit. Should be in gocam namespace.
-    comments:
-    - Typically does not need to be exposed to end-user, this exists to allow activity
-      flows
-    from_schema: https://w3id.org/gocam
-    identifier: true
-    alias: id
-    owner: Activity
-    domain_of:
-    - Model
-    - Activity
-    - Object
-    range: uriorcurie
-    required: true
-  enabled_by:
-    name: enabled_by
-    description: The gene product or complex that carries out the activity
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    alias: enabled_by
-    owner: Activity
-    domain_of:
-    - Activity
-    range: EnabledByAssociation
-    inlined: true
-  molecular_function:
-    name: molecular_function
-    description: The molecular function that is carried out by the gene product or
-      complex
-    todos:
-    - currently BP, CC etc are at the level of the activity, not the MolecularFunctionAssociation
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    alias: molecular_function
-    owner: Activity
-    domain_of:
-    - Activity
-    range: MolecularFunctionAssociation
-    inlined: true
-  occurs_in:
-    name: occurs_in
-    description: The cellular location in which the activity occurs
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    alias: occurs_in
-    owner: Activity
-    domain_of:
-    - Activity
-    range: CellularAnatomicalEntityAssociation
-    inlined: true
-  part_of:
-    name: part_of
-    description: The larger biological process in which the activity is a part
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    alias: part_of
-    owner: Activity
-    domain_of:
-    - Activity
-    range: BiologicalProcessAssociation
-    inlined: true
-  has_input:
-    name: has_input
-    description: The input molecules that are directly consumed by the activity
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    multivalued: true
-    alias: has_input
-    owner: Activity
-    domain_of:
-    - Activity
-    range: MoleculeAssociation
-    inlined: true
-    inlined_as_list: true
-  has_primary_input:
-    name: has_primary_input
-    description: The primary input molecule that is directly consumed by the activity
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    alias: has_primary_input
-    owner: Activity
-    domain_of:
-    - Activity
-    range: MoleculeAssociation
-    inlined: true
-  has_output:
-    name: has_output
-    description: The output molecules that are directly produced by the activity
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    multivalued: true
-    alias: has_output
-    owner: Activity
-    domain_of:
-    - Activity
-    range: MoleculeAssociation
-    inlined: true
-    inlined_as_list: true
-  has_primary_output:
-    name: has_primary_output
-    description: The primary output molecule that is directly produced by the activity
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    alias: has_primary_output
-    owner: Activity
-    domain_of:
-    - Activity
-    range: MoleculeAssociation
-    inlined: true
-  causal_associations:
-    name: causal_associations
-    description: The causal associations that connect this activity to other activities
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    multivalued: true
-    alias: causal_associations
-    owner: Activity
-    domain_of:
-    - Activity
-    range: CausalAssociation
-    inlined: true
-    inlined_as_list: true
-  provenances:
-    name: provenances
-    description: Provenance information for the activity
-    from_schema: https://w3id.org/gocam
-    multivalued: true
-    alias: provenances
-    owner: Activity
-    domain_of:
-    - Model
-    - Activity
-    - EvidenceItem
-    - Association
-    range: ProvenanceInfo
-    inlined: true
-    inlined_as_list: true
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    - - - - \ No newline at end of file diff --git a/pr-preview/pr-11/Association/index.html b/pr-preview/pr-11/Association/index.html deleted file mode 100644 index b2d7614..0000000 --- a/pr-preview/pr-11/Association/index.html +++ /dev/null @@ -1,419 +0,0 @@ - - - - - - - - - - -Class: Association - gocam - - - - - - - - - - - - -
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    Class: Association

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    An abstract grouping for different kinds of evidence-associated provenance

    -
      -
    • NOTE: this is an abstract class and should not be instantiated directly
      • -
    -

    URI: gocam:Association

    -
    classDiagram - class Association - click Association href "../Association" - Association <|-- EnabledByAssociation - click EnabledByAssociation href "../EnabledByAssociation" - Association <|-- CausalAssociation - click CausalAssociation href "../CausalAssociation" - Association <|-- TermAssociation - click TermAssociation href "../TermAssociation" - - Association : evidence - - - - - Association --> "*" EvidenceItem : evidence - click EvidenceItem href "../EvidenceItem" - - - Association : provenances - - - - - Association --> "*" ProvenanceInfo : provenances - click ProvenanceInfo href "../ProvenanceInfo" - - - Association : type - - -
    -

    Inheritance

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    Slots

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    NameCardinality and RangeDescriptionInheritance
    type0..1
    String    		direct
    evidence*
    EvidenceItem    		direct
    provenances*
    ProvenanceInfo    		direct
    -

    Identifier and Mapping Information

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    Schema Source

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    • from schema: https://w3id.org/gocam
      • -
    -

    Mappings

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    Mapping TypeMapped Value
    selfgocam:Association
    nativegocam:Association
    -

    LinkML Source

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    Direct

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    name: Association
-description: An abstract grouping for different kinds of evidence-associated provenance
-from_schema: https://w3id.org/gocam
-abstract: true
-attributes:
-  type:
-    name: type
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    designates_type: true
-    domain_of:
-    - Association
-    - Object
-  evidence:
-    name: evidence
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    multivalued: true
-    domain_of:
-    - Association
-    range: EvidenceItem
-    inlined: true
-  provenances:
-    name: provenances
-    from_schema: https://w3id.org/gocam
-    multivalued: true
-    domain_of:
-    - Model
-    - Activity
-    - EvidenceItem
-    - Association
-    range: ProvenanceInfo
-    inlined: true
-    inlined_as_list: true
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    Induced

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    name: Association
-description: An abstract grouping for different kinds of evidence-associated provenance
-from_schema: https://w3id.org/gocam
-abstract: true
-attributes:
-  type:
-    name: type
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    designates_type: true
-    alias: type
-    owner: Association
-    domain_of:
-    - Association
-    - Object
-    range: string
-  evidence:
-    name: evidence
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    multivalued: true
-    alias: evidence
-    owner: Association
-    domain_of:
-    - Association
-    range: EvidenceItem
-    inlined: true
-  provenances:
-    name: provenances
-    from_schema: https://w3id.org/gocam
-    multivalued: true
-    alias: provenances
-    owner: Association
-    domain_of:
-    - Model
-    - Activity
-    - EvidenceItem
-    - Association
-    range: ProvenanceInfo
-    inlined: true
-    inlined_as_list: true
-
-
    -
    -
    -
    - -
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    - -
    -
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    - - - - \ No newline at end of file diff --git a/pr-preview/pr-11/BiologicalProcessAssociation/index.html b/pr-preview/pr-11/BiologicalProcessAssociation/index.html deleted file mode 100644 index 65c80f6..0000000 --- a/pr-preview/pr-11/BiologicalProcessAssociation/index.html +++ /dev/null @@ -1,465 +0,0 @@ - - - - - - - - - - -Class: BiologicalProcessAssociation - gocam - - - - - - - - - - - - -
    -
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    -
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    -
    -
    - - - -

    Class: BiologicalProcessAssociation

    -

    An association between an activity and a biological process term

    -

    URI: gocam:BiologicalProcessAssociation

    -
    classDiagram - class BiologicalProcessAssociation - click BiologicalProcessAssociation href "../BiologicalProcessAssociation" - TermAssociation <|-- BiologicalProcessAssociation - click TermAssociation href "../TermAssociation" - - BiologicalProcessAssociation : evidence - - - - - BiologicalProcessAssociation --> "*" EvidenceItem : evidence - click EvidenceItem href "../EvidenceItem" - - - BiologicalProcessAssociation : provenances - - - - - BiologicalProcessAssociation --> "*" ProvenanceInfo : provenances - click ProvenanceInfo href "../ProvenanceInfo" - - - BiologicalProcessAssociation : term - - - - - BiologicalProcessAssociation --> "0..1" BiologicalProcessTermObject : term - click BiologicalProcessTermObject href "../BiologicalProcessTermObject" - - - BiologicalProcessAssociation : type - - -
    -

    Inheritance

    - -

    Slots

    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
    NameCardinality and RangeDescriptionInheritance
    term0..1
    BiologicalProcessTermObject    		The ontology term that describes the nature of the associationTermAssociation
    type0..1
    String    		Association
    evidence*
    EvidenceItem    		Association
    provenances*
    ProvenanceInfo    		Association
    -

    Usages

    - - - - - - - - - - - - - - - - - -
    used byused intypeused
    Activitypart_ofrangeBiologicalProcessAssociation
    -

    Identifier and Mapping Information

    -

    Schema Source

    -
      -
    • from schema: https://w3id.org/gocam
      • -
    -

    Mappings

    - - - - - - - - - - - - - - - - - -
    Mapping TypeMapped Value
    selfgocam:BiologicalProcessAssociation
    nativegocam:BiologicalProcessAssociation
    -

    LinkML Source

    - -

    Direct

    -
    -
    name: BiologicalProcessAssociation
-description: An association between an activity and a biological process term
-from_schema: https://w3id.org/gocam
-is_a: TermAssociation
-slot_usage:
-  term:
-    name: term
-    domain_of:
-    - EvidenceItem
-    - EnabledByAssociation
-    - TermAssociation
-    range: BiologicalProcessTermObject
-  happens_during:
-    name: happens_during
-    description: Optional extension describing where the BP takes place
-    range: PhaseTermObject
-  part_of:
-    name: part_of
-    description: Optional extension allowing hierarchical nesting of BPs
-    range: BiologicalProcessTermObject
-
-
    -
    -

    Induced

    -
    -
    name: BiologicalProcessAssociation
-description: An association between an activity and a biological process term
-from_schema: https://w3id.org/gocam
-is_a: TermAssociation
-slot_usage:
-  term:
-    name: term
-    domain_of:
-    - EvidenceItem
-    - EnabledByAssociation
-    - TermAssociation
-    range: BiologicalProcessTermObject
-  happens_during:
-    name: happens_during
-    description: Optional extension describing where the BP takes place
-    range: PhaseTermObject
-  part_of:
-    name: part_of
-    description: Optional extension allowing hierarchical nesting of BPs
-    range: BiologicalProcessTermObject
-attributes:
-  term:
-    name: term
-    description: The ontology term that describes the nature of the association
-    from_schema: https://w3id.org/gocam
-    alias: term
-    owner: BiologicalProcessAssociation
-    domain_of:
-    - EvidenceItem
-    - EnabledByAssociation
-    - TermAssociation
-    range: BiologicalProcessTermObject
-  type:
-    name: type
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    designates_type: true
-    alias: type
-    owner: BiologicalProcessAssociation
-    domain_of:
-    - Association
-    - Object
-    range: string
-  evidence:
-    name: evidence
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    multivalued: true
-    alias: evidence
-    owner: BiologicalProcessAssociation
-    domain_of:
-    - Association
-    range: EvidenceItem
-    inlined: true
-  provenances:
-    name: provenances
-    from_schema: https://w3id.org/gocam
-    multivalued: true
-    alias: provenances
-    owner: BiologicalProcessAssociation
-    domain_of:
-    - Model
-    - Activity
-    - EvidenceItem
-    - Association
-    range: ProvenanceInfo
-    inlined: true
-    inlined_as_list: true
-
-
    -
    -
    -
    - -
    -
    - -
    -
    -
    -
    - - - - \ No newline at end of file diff --git a/pr-preview/pr-11/BiologicalProcessTermObject/index.html b/pr-preview/pr-11/BiologicalProcessTermObject/index.html deleted file mode 100644 index 675810e..0000000 --- a/pr-preview/pr-11/BiologicalProcessTermObject/index.html +++ /dev/null @@ -1,420 +0,0 @@ - - - - - - - - - - -Class: BiologicalProcessTermObject - gocam - - - - - - - - - - - - -
    -
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    -
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    - - - -

    Class: BiologicalProcessTermObject

    -

    A term object that represents a biological process term from GO

    -

    URI: gocam:BiologicalProcessTermObject

    -
    classDiagram - class BiologicalProcessTermObject - click BiologicalProcessTermObject href "../BiologicalProcessTermObject" - TermObject <|-- BiologicalProcessTermObject - click TermObject href "../TermObject" - - BiologicalProcessTermObject : id - - BiologicalProcessTermObject : label - - BiologicalProcessTermObject : obsolete - - BiologicalProcessTermObject : type - - -
    -

    Inheritance

    - -

    Slots

    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
    NameCardinality and RangeDescriptionInheritance
    id1
    Uriorcurie    		Object
    label0..1
    String    		Object
    type0..1
    Uriorcurie    		Object
    obsolete0..1
    Boolean    		Object
    -

    Usages

    - - - - - - - - - - - - - - - - - -
    used byused intypeused
    BiologicalProcessAssociationtermrangeBiologicalProcessTermObject
    -

    Identifier and Mapping Information

    -

    Valid ID Prefixes

    -

    Instances of this class should have identifiers with one of the following prefixes:

    -
      -
    • GO
      • -
    -

    Schema Source

    -
      -
    • from schema: https://w3id.org/gocam
      • -
    -

    Mappings

    - - - - - - - - - - - - - - - - - -
    Mapping TypeMapped Value
    selfgocam:BiologicalProcessTermObject
    nativegocam:BiologicalProcessTermObject
    -

    LinkML Source

    - -

    Direct

    -
    -
    name: BiologicalProcessTermObject
-id_prefixes:
-- GO
-description: A term object that represents a biological process term from GO
-from_schema: https://w3id.org/gocam
-is_a: TermObject
-
-
    -
    -

    Induced

    -
    -
    name: BiologicalProcessTermObject
-id_prefixes:
-- GO
-description: A term object that represents a biological process term from GO
-from_schema: https://w3id.org/gocam
-is_a: TermObject
-attributes:
-  id:
-    name: id
-    from_schema: https://w3id.org/gocam
-    identifier: true
-    alias: id
-    owner: BiologicalProcessTermObject
-    domain_of:
-    - Model
-    - Activity
-    - Object
-    range: uriorcurie
-    required: true
-  label:
-    name: label
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    slot_uri: rdfs:label
-    alias: label
-    owner: BiologicalProcessTermObject
-    domain_of:
-    - Object
-    range: string
-  type:
-    name: type
-    from_schema: https://w3id.org/gocam
-    designates_type: true
-    alias: type
-    owner: BiologicalProcessTermObject
-    domain_of:
-    - Association
-    - Object
-    range: uriorcurie
-  obsolete:
-    name: obsolete
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    alias: obsolete
-    owner: BiologicalProcessTermObject
-    domain_of:
-    - Object
-    range: boolean
-
-
    -
    -
    -
    - -
    -
    - -
    -
    -
    -
    - - - - \ No newline at end of file diff --git a/pr-preview/pr-11/Boolean/index.html b/pr-preview/pr-11/Boolean/index.html deleted file mode 100644 index 1c7fca7..0000000 --- a/pr-preview/pr-11/Boolean/index.html +++ /dev/null @@ -1,364 +0,0 @@ - - - - - - - - - - - - - - - - - - Type: Boolean - gocam - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
    - -
    - - - - -
    - - -
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    - - - - - - - - - -

    Type: Boolean

    -

    A binary (true or false) value

    -

    URI: xsd:boolean

    -
      -
    • -

      base: Bool

      -
      • -
    • -

      uri: xsd:boolean

      -
      • -
    • -

      repr: bool

      -
      • -
    -

    Identifier and Mapping Information

    -

    Schema Source

    -
      -
    • from schema: https://w3id.org/gocam
      • -
    - - - - - - -
    -
    - - - - -
    - -
    - - - -
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    - - - - - - - - - - \ No newline at end of file diff --git a/pr-preview/pr-11/CausalAssociation/index.html b/pr-preview/pr-11/CausalAssociation/index.html deleted file mode 100644 index 6c8fab6..0000000 --- a/pr-preview/pr-11/CausalAssociation/index.html +++ /dev/null @@ -1,475 +0,0 @@ - - - - - - - - - - -Class: CausalAssociation - gocam - - - - - - - - - - - - -
    -
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    - -
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    -
    - - - -

    Class: CausalAssociation

    -

    A causal association between two activities

    -

    URI: gocam:CausalAssociation

    -
    classDiagram - class CausalAssociation - click CausalAssociation href "../CausalAssociation" - Association <|-- CausalAssociation - click Association href "../Association" - - CausalAssociation : downstream_activity - - - - - CausalAssociation --> "0..1" Activity : downstream_activity - click Activity href "../Activity" - - - CausalAssociation : evidence - - - - - CausalAssociation --> "*" EvidenceItem : evidence - click EvidenceItem href "../EvidenceItem" - - - CausalAssociation : predicate - - - - - CausalAssociation --> "0..1" PredicateTermObject : predicate - click PredicateTermObject href "../PredicateTermObject" - - - CausalAssociation : provenances - - - - - CausalAssociation --> "*" ProvenanceInfo : provenances - click ProvenanceInfo href "../ProvenanceInfo" - - - CausalAssociation : type - - -
    -

    Inheritance

    - -

    Slots

    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
    NameCardinality and RangeDescriptionInheritance
    predicate0..1
    PredicateTermObject    		The RO relation that represents the type of relationshipdirect
    downstream_activity0..1
    Activity    		The activity unit that is downstream of this onedirect
    type0..1
    String    		Association
    evidence*
    EvidenceItem    		Association
    provenances*
    ProvenanceInfo    		Association
    -

    Usages

    - - - - - - - - - - - - - - - - - -
    used byused intypeused
    Activitycausal_associationsrangeCausalAssociation
    -

    Identifier and Mapping Information

    -

    Schema Source

    -
      -
    • from schema: https://w3id.org/gocam
      • -
    -

    Mappings

    - - - - - - - - - - - - - - - - - -
    Mapping TypeMapped Value
    selfgocam:CausalAssociation
    nativegocam:CausalAssociation
    -

    LinkML Source

    - -

    Direct

    -
    -
    name: CausalAssociation
-description: A causal association between two activities
-from_schema: https://w3id.org/gocam
-is_a: Association
-attributes:
-  predicate:
-    name: predicate
-    description: The RO relation that represents the type of relationship
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    domain_of:
-    - CausalAssociation
-    range: PredicateTermObject
-  downstream_activity:
-    name: downstream_activity
-    description: The activity unit that is downstream of this one
-    from_schema: https://w3id.org/gocam
-    aliases:
-    - object
-    rank: 1000
-    domain_of:
-    - CausalAssociation
-    range: Activity
-
-
    -
    -

    Induced

    -
    -
    name: CausalAssociation
-description: A causal association between two activities
-from_schema: https://w3id.org/gocam
-is_a: Association
-attributes:
-  predicate:
-    name: predicate
-    description: The RO relation that represents the type of relationship
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    alias: predicate
-    owner: CausalAssociation
-    domain_of:
-    - CausalAssociation
-    range: PredicateTermObject
-  downstream_activity:
-    name: downstream_activity
-    description: The activity unit that is downstream of this one
-    from_schema: https://w3id.org/gocam
-    aliases:
-    - object
-    rank: 1000
-    alias: downstream_activity
-    owner: CausalAssociation
-    domain_of:
-    - CausalAssociation
-    range: Activity
-  type:
-    name: type
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    designates_type: true
-    alias: type
-    owner: CausalAssociation
-    domain_of:
-    - Association
-    - Object
-    range: string
-  evidence:
-    name: evidence
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    multivalued: true
-    alias: evidence
-    owner: CausalAssociation
-    domain_of:
-    - Association
-    range: EvidenceItem
-    inlined: true
-  provenances:
-    name: provenances
-    from_schema: https://w3id.org/gocam
-    multivalued: true
-    alias: provenances
-    owner: CausalAssociation
-    domain_of:
-    - Model
-    - Activity
-    - EvidenceItem
-    - Association
-    range: ProvenanceInfo
-    inlined: true
-    inlined_as_list: true
-
-
    -
    -
    -
    - -
    -
    - -
    -
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    -
    - - - - \ No newline at end of file diff --git a/pr-preview/pr-11/CausalPredicateEnum/index.html b/pr-preview/pr-11/CausalPredicateEnum/index.html deleted file mode 100644 index eeb5afe..0000000 --- a/pr-preview/pr-11/CausalPredicateEnum/index.html +++ /dev/null @@ -1,469 +0,0 @@ - - - - - - - - - - - - - - - - - - Enum: CausalPredicateEnum - gocam - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
    - -
    - - - - -
    - - -
    - -
    - - - - - - -
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    - - - -
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    - - - - -
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    - - - -
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    - - - -
    -
    - - - - - - - - - -

    Enum: CausalPredicateEnum

    -

    URI: CausalPredicateEnum

    -

    Permissible Values

    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
    ValueMeaningDescription
    causally upstream of, positive effectRO:0002304
    causally upstream of, negative effectRO:0002305
    causally upstream ofRO:0002411
    immediately causally upstream ofRO:0002412
    causally upstream of or withinRO:0002418
    causally upstream of or within, negative effectRO:0004046
    causally upstream of or within, positive effectRO:0004047
    regulatesRO:0002211
    negatively regulatesRO:0002212
    positively regulatesRO:0002213
    -

    Identifier and Mapping Information

    -

    Schema Source

    -
      -
    • from schema: https://w3id.org/gocam
      • -
    -

    LinkML Source

    -
    - -
    name: CausalPredicateEnum
-from_schema: https://w3id.org/gocam
-rank: 1000
-permissible_values:
-  causally upstream of, positive effect:
-    text: causally upstream of, positive effect
-    meaning: RO:0002304
-  causally upstream of, negative effect:
-    text: causally upstream of, negative effect
-    meaning: RO:0002305
-  causally upstream of:
-    text: causally upstream of
-    meaning: RO:0002411
-  immediately causally upstream of:
-    text: immediately causally upstream of
-    meaning: RO:0002412
-  causally upstream of or within:
-    text: causally upstream of or within
-    meaning: RO:0002418
-  causally upstream of or within, negative effect:
-    text: causally upstream of or within, negative effect
-    meaning: RO:0004046
-  causally upstream of or within, positive effect:
-    text: causally upstream of or within, positive effect
-    meaning: RO:0004047
-  regulates:
-    text: regulates
-    meaning: RO:0002211
-  negatively regulates:
-    text: negatively regulates
-    meaning: RO:0002212
-  positively regulates:
-    text: positively regulates
-    meaning: RO:0002213
-
-
    - -
    - - - - - - -
    -
    - - - - -
    - -
    - - - -
    -
    -
    -
    - - - - - - - - - - \ No newline at end of file diff --git a/pr-preview/pr-11/CellTypeAssociation/index.html b/pr-preview/pr-11/CellTypeAssociation/index.html deleted file mode 100644 index c814674..0000000 --- a/pr-preview/pr-11/CellTypeAssociation/index.html +++ /dev/null @@ -1,431 +0,0 @@ - - - - - - - - - - -Class: CellTypeAssociation - gocam - - - - - - - - - - - - -
    -
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    - - - -

    Class: CellTypeAssociation

    -

    An association between an activity and a cell type term

    -

    URI: gocam:CellTypeAssociation

    -
    classDiagram - class CellTypeAssociation - click CellTypeAssociation href "../CellTypeAssociation" - TermAssociation <|-- CellTypeAssociation - click TermAssociation href "../TermAssociation" - - CellTypeAssociation : evidence - - - - - CellTypeAssociation --> "*" EvidenceItem : evidence - click EvidenceItem href "../EvidenceItem" - - - CellTypeAssociation : provenances - - - - - CellTypeAssociation --> "*" ProvenanceInfo : provenances - click ProvenanceInfo href "../ProvenanceInfo" - - - CellTypeAssociation : term - - - - - CellTypeAssociation --> "0..1" CellTypeTermObject : term - click CellTypeTermObject href "../CellTypeTermObject" - - - CellTypeAssociation : type - - -
    -

    Inheritance

    - -

    Slots

    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
    NameCardinality and RangeDescriptionInheritance
    term0..1
    CellTypeTermObject    		The ontology term that describes the nature of the associationTermAssociation
    type0..1
    String    		Association
    evidence*
    EvidenceItem    		Association
    provenances*
    ProvenanceInfo    		Association
    -

    Identifier and Mapping Information

    -

    Schema Source

    -
      -
    • from schema: https://w3id.org/gocam
      • -
    -

    Mappings

    - - - - - - - - - - - - - - - - - -
    Mapping TypeMapped Value
    selfgocam:CellTypeAssociation
    nativegocam:CellTypeAssociation
    -

    LinkML Source

    - -

    Direct

    -
    -
    name: CellTypeAssociation
-description: An association between an activity and a cell type term
-from_schema: https://w3id.org/gocam
-is_a: TermAssociation
-slot_usage:
-  term:
-    name: term
-    domain_of:
-    - EvidenceItem
-    - EnabledByAssociation
-    - TermAssociation
-    range: CellTypeTermObject
-  part_of:
-    name: part_of
-    range: GrossAnatomyAssociation
-
-
    -
    -

    Induced

    -
    -
    name: CellTypeAssociation
-description: An association between an activity and a cell type term
-from_schema: https://w3id.org/gocam
-is_a: TermAssociation
-slot_usage:
-  term:
-    name: term
-    domain_of:
-    - EvidenceItem
-    - EnabledByAssociation
-    - TermAssociation
-    range: CellTypeTermObject
-  part_of:
-    name: part_of
-    range: GrossAnatomyAssociation
-attributes:
-  term:
-    name: term
-    description: The ontology term that describes the nature of the association
-    from_schema: https://w3id.org/gocam
-    alias: term
-    owner: CellTypeAssociation
-    domain_of:
-    - EvidenceItem
-    - EnabledByAssociation
-    - TermAssociation
-    range: CellTypeTermObject
-  type:
-    name: type
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    designates_type: true
-    alias: type
-    owner: CellTypeAssociation
-    domain_of:
-    - Association
-    - Object
-    range: string
-  evidence:
-    name: evidence
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    multivalued: true
-    alias: evidence
-    owner: CellTypeAssociation
-    domain_of:
-    - Association
-    range: EvidenceItem
-    inlined: true
-  provenances:
-    name: provenances
-    from_schema: https://w3id.org/gocam
-    multivalued: true
-    alias: provenances
-    owner: CellTypeAssociation
-    domain_of:
-    - Model
-    - Activity
-    - EvidenceItem
-    - Association
-    range: ProvenanceInfo
-    inlined: true
-    inlined_as_list: true
-
-
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    - - - - \ No newline at end of file diff --git a/pr-preview/pr-11/CellTypeTermObject/index.html b/pr-preview/pr-11/CellTypeTermObject/index.html deleted file mode 100644 index bc873bf..0000000 --- a/pr-preview/pr-11/CellTypeTermObject/index.html +++ /dev/null @@ -1,437 +0,0 @@ - - - - - - - - - - -Class: CellTypeTermObject - gocam - - - - - - - - - - - - -
    -
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    Class: CellTypeTermObject

    -

    A term object that represents a cell type term from CL

    -

    URI: gocam:CellTypeTermObject

    -
    classDiagram - class CellTypeTermObject - click CellTypeTermObject href "../CellTypeTermObject" - TermObject <|-- CellTypeTermObject - click TermObject href "../TermObject" - - CellTypeTermObject : id - - CellTypeTermObject : label - - CellTypeTermObject : obsolete - - CellTypeTermObject : type - - -
    -

    Inheritance

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    Slots

    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
    NameCardinality and RangeDescriptionInheritance
    id1
    Uriorcurie    		Object
    label0..1
    String    		Object
    type0..1
    Uriorcurie    		Object
    obsolete0..1
    Boolean    		Object
    -

    Usages

    - - - - - - - - - - - - - - - - - -
    used byused intypeused
    CellTypeAssociationtermrangeCellTypeTermObject
    -

    Identifier and Mapping Information

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    Valid ID Prefixes

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    Instances of this class should have identifiers with one of the following prefixes:

    -
      -
    • -

      CL

      -
      • -
    • -

      PO

      -
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    • -

      FAO

      -
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      DDANAT

      -
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    Schema Source

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    • from schema: https://w3id.org/gocam
      • -
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    Mappings

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    Mapping TypeMapped Value
    selfgocam:CellTypeTermObject
    nativegocam:CellTypeTermObject
    -

    LinkML Source

    - -

    Direct

    -
    -
    name: CellTypeTermObject
-id_prefixes:
-- CL
-- PO
-- FAO
-- DDANAT
-description: A term object that represents a cell type term from CL
-from_schema: https://w3id.org/gocam
-is_a: TermObject
-
-
    -
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    Induced

    -
    -
    name: CellTypeTermObject
-id_prefixes:
-- CL
-- PO
-- FAO
-- DDANAT
-description: A term object that represents a cell type term from CL
-from_schema: https://w3id.org/gocam
-is_a: TermObject
-attributes:
-  id:
-    name: id
-    from_schema: https://w3id.org/gocam
-    identifier: true
-    alias: id
-    owner: CellTypeTermObject
-    domain_of:
-    - Model
-    - Activity
-    - Object
-    range: uriorcurie
-    required: true
-  label:
-    name: label
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    slot_uri: rdfs:label
-    alias: label
-    owner: CellTypeTermObject
-    domain_of:
-    - Object
-    range: string
-  type:
-    name: type
-    from_schema: https://w3id.org/gocam
-    designates_type: true
-    alias: type
-    owner: CellTypeTermObject
-    domain_of:
-    - Association
-    - Object
-    range: uriorcurie
-  obsolete:
-    name: obsolete
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    alias: obsolete
-    owner: CellTypeTermObject
-    domain_of:
-    - Object
-    range: boolean
-
-
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    - - - - \ No newline at end of file diff --git a/pr-preview/pr-11/CellularAnatomicalEntityAssociation/index.html b/pr-preview/pr-11/CellularAnatomicalEntityAssociation/index.html deleted file mode 100644 index 60c6c8e..0000000 --- a/pr-preview/pr-11/CellularAnatomicalEntityAssociation/index.html +++ /dev/null @@ -1,455 +0,0 @@ - - - - - - - - - - -Class: CellularAnatomicalEntityAssociation - gocam - - - - - - - - - - - - -
    -
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    Class: CellularAnatomicalEntityAssociation

    -

    An association between an activity and a cellular anatomical entity term

    -

    URI: gocam:CellularAnatomicalEntityAssociation

    -
    classDiagram - class CellularAnatomicalEntityAssociation - click CellularAnatomicalEntityAssociation href "../CellularAnatomicalEntityAssociation" - TermAssociation <|-- CellularAnatomicalEntityAssociation - click TermAssociation href "../TermAssociation" - - CellularAnatomicalEntityAssociation : evidence - - - - - CellularAnatomicalEntityAssociation --> "*" EvidenceItem : evidence - click EvidenceItem href "../EvidenceItem" - - - CellularAnatomicalEntityAssociation : provenances - - - - - CellularAnatomicalEntityAssociation --> "*" ProvenanceInfo : provenances - click ProvenanceInfo href "../ProvenanceInfo" - - - CellularAnatomicalEntityAssociation : term - - - - - CellularAnatomicalEntityAssociation --> "0..1" CellularAnatomicalEntityTermObject : term - click CellularAnatomicalEntityTermObject href "../CellularAnatomicalEntityTermObject" - - - CellularAnatomicalEntityAssociation : type - - -
    -

    Inheritance

    - -

    Slots

    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
    NameCardinality and RangeDescriptionInheritance
    term0..1
    CellularAnatomicalEntityTermObject    		The ontology term that describes the nature of the associationTermAssociation
    type0..1
    String    		Association
    evidence*
    EvidenceItem    		Association
    provenances*
    ProvenanceInfo    		Association
    -

    Usages

    - - - - - - - - - - - - - - - - - -
    used byused intypeused
    Activityoccurs_inrangeCellularAnatomicalEntityAssociation
    -

    Identifier and Mapping Information

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    Schema Source

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      -
    • from schema: https://w3id.org/gocam
      • -
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    Mappings

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    Mapping TypeMapped Value
    selfgocam:CellularAnatomicalEntityAssociation
    nativegocam:CellularAnatomicalEntityAssociation
    -

    LinkML Source

    - -

    Direct

    -
    -
    name: CellularAnatomicalEntityAssociation
-description: An association between an activity and a cellular anatomical entity term
-from_schema: https://w3id.org/gocam
-is_a: TermAssociation
-slot_usage:
-  term:
-    name: term
-    domain_of:
-    - EvidenceItem
-    - EnabledByAssociation
-    - TermAssociation
-    range: CellularAnatomicalEntityTermObject
-  part_of:
-    name: part_of
-    range: CellTypeAssociation
-
-
    -
    -

    Induced

    -
    -
    name: CellularAnatomicalEntityAssociation
-description: An association between an activity and a cellular anatomical entity term
-from_schema: https://w3id.org/gocam
-is_a: TermAssociation
-slot_usage:
-  term:
-    name: term
-    domain_of:
-    - EvidenceItem
-    - EnabledByAssociation
-    - TermAssociation
-    range: CellularAnatomicalEntityTermObject
-  part_of:
-    name: part_of
-    range: CellTypeAssociation
-attributes:
-  term:
-    name: term
-    description: The ontology term that describes the nature of the association
-    from_schema: https://w3id.org/gocam
-    alias: term
-    owner: CellularAnatomicalEntityAssociation
-    domain_of:
-    - EvidenceItem
-    - EnabledByAssociation
-    - TermAssociation
-    range: CellularAnatomicalEntityTermObject
-  type:
-    name: type
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    designates_type: true
-    alias: type
-    owner: CellularAnatomicalEntityAssociation
-    domain_of:
-    - Association
-    - Object
-    range: string
-  evidence:
-    name: evidence
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    multivalued: true
-    alias: evidence
-    owner: CellularAnatomicalEntityAssociation
-    domain_of:
-    - Association
-    range: EvidenceItem
-    inlined: true
-  provenances:
-    name: provenances
-    from_schema: https://w3id.org/gocam
-    multivalued: true
-    alias: provenances
-    owner: CellularAnatomicalEntityAssociation
-    domain_of:
-    - Model
-    - Activity
-    - EvidenceItem
-    - Association
-    range: ProvenanceInfo
-    inlined: true
-    inlined_as_list: true
-
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    - - - - \ No newline at end of file diff --git a/pr-preview/pr-11/CellularAnatomicalEntityTermObject/index.html b/pr-preview/pr-11/CellularAnatomicalEntityTermObject/index.html deleted file mode 100644 index f8034d0..0000000 --- a/pr-preview/pr-11/CellularAnatomicalEntityTermObject/index.html +++ /dev/null @@ -1,422 +0,0 @@ - - - - - - - - - - -Class: CellularAnatomicalEntityTermObject - gocam - - - - - - - - - - - - -
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    Class: CellularAnatomicalEntityTermObject

    -

    A term object that represents a cellular anatomical entity term from GO

    -

    URI: gocam:CellularAnatomicalEntityTermObject

    -
    classDiagram - class CellularAnatomicalEntityTermObject - click CellularAnatomicalEntityTermObject href "../CellularAnatomicalEntityTermObject" - TermObject <|-- CellularAnatomicalEntityTermObject - click TermObject href "../TermObject" - - CellularAnatomicalEntityTermObject : id - - CellularAnatomicalEntityTermObject : label - - CellularAnatomicalEntityTermObject : obsolete - - CellularAnatomicalEntityTermObject : type - - -
    -

    Inheritance

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    Slots

    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
    NameCardinality and RangeDescriptionInheritance
    id1
    Uriorcurie    		Object
    label0..1
    String    		Object
    type0..1
    Uriorcurie    		Object
    obsolete0..1
    Boolean    		Object
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    Usages

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    used byused intypeused
    CellularAnatomicalEntityAssociationtermrangeCellularAnatomicalEntityTermObject
    -

    Identifier and Mapping Information

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    Valid ID Prefixes

    -

    Instances of this class should have identifiers with one of the following prefixes:

    -
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    • GO
      • -
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    Schema Source

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    • from schema: https://w3id.org/gocam
      • -
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    Mappings

    - - - - - - - - - - - - - - - - - -
    Mapping TypeMapped Value
    selfgocam:CellularAnatomicalEntityTermObject
    nativegocam:CellularAnatomicalEntityTermObject
    -

    LinkML Source

    - -

    Direct

    -
    -
    name: CellularAnatomicalEntityTermObject
-id_prefixes:
-- GO
-description: A term object that represents a cellular anatomical entity term from
-  GO
-from_schema: https://w3id.org/gocam
-is_a: TermObject
-
-
    -
    -

    Induced

    -
    -
    name: CellularAnatomicalEntityTermObject
-id_prefixes:
-- GO
-description: A term object that represents a cellular anatomical entity term from
-  GO
-from_schema: https://w3id.org/gocam
-is_a: TermObject
-attributes:
-  id:
-    name: id
-    from_schema: https://w3id.org/gocam
-    identifier: true
-    alias: id
-    owner: CellularAnatomicalEntityTermObject
-    domain_of:
-    - Model
-    - Activity
-    - Object
-    range: uriorcurie
-    required: true
-  label:
-    name: label
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    slot_uri: rdfs:label
-    alias: label
-    owner: CellularAnatomicalEntityTermObject
-    domain_of:
-    - Object
-    range: string
-  type:
-    name: type
-    from_schema: https://w3id.org/gocam
-    designates_type: true
-    alias: type
-    owner: CellularAnatomicalEntityTermObject
-    domain_of:
-    - Association
-    - Object
-    range: uriorcurie
-  obsolete:
-    name: obsolete
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    alias: obsolete
-    owner: CellularAnatomicalEntityTermObject
-    domain_of:
-    - Object
-    range: boolean
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    - - - - \ No newline at end of file diff --git a/pr-preview/pr-11/Curie/index.html b/pr-preview/pr-11/Curie/index.html deleted file mode 100644 index 121c35d..0000000 --- a/pr-preview/pr-11/Curie/index.html +++ /dev/null @@ -1,376 +0,0 @@ - - - - - - - - - - - - - - - - - - Type: Curie - gocam - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
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    Type: Curie

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    a compact URI

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    URI: xsd:string

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      base: Curie

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      uri: xsd:string

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      repr: str

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    Comments

    -
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    • in RDF serializations this MUST be expanded to a URI
      • -
    • in non-RDF serializations MAY be serialized as the compact representation
      • -
    -

    Identifier and Mapping Information

    -

    Schema Source

    -
      -
    • from schema: https://w3id.org/gocam
      • -
    - - - - - - -
    -
    - - - - -
    - -
    - - - -
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    - - - - - - - - - - \ No newline at end of file diff --git a/pr-preview/pr-11/Date/index.html b/pr-preview/pr-11/Date/index.html deleted file mode 100644 index 8eacc9a..0000000 --- a/pr-preview/pr-11/Date/index.html +++ /dev/null @@ -1,364 +0,0 @@ - - - - - - - - - - - - - - - - - - Type: Date - gocam - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
    - -
    - - - - -
    - - -
    - -
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    - - - -
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    - - - -
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    - - - -
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    Type: Date

    -

    a date (year, month and day) in an idealized calendar

    -

    URI: xsd:date

    -
      -
    • -

      base: XSDDate

      -
      • -
    • -

      uri: xsd:date

      -
      • -
    • -

      repr: str

      -
      • -
    -

    Identifier and Mapping Information

    -

    Schema Source

    -
      -
    • from schema: https://w3id.org/gocam
      • -
    - - - - - - -
    -
    - - - - -
    - -
    - - - -
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    - - - - - - - - - - \ No newline at end of file diff --git a/pr-preview/pr-11/DateOrDatetime/index.html b/pr-preview/pr-11/DateOrDatetime/index.html deleted file mode 100644 index bd3e33a..0000000 --- a/pr-preview/pr-11/DateOrDatetime/index.html +++ /dev/null @@ -1,364 +0,0 @@ - - - - - - - - - - - - - - - - - - Type: DateOrDatetime - gocam - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
    - -
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    Type: DateOrDatetime

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    Either a date or a datetime

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    URI: linkml:DateOrDatetime

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      base: str

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      uri: linkml:DateOrDatetime

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      repr: str

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    Identifier and Mapping Information

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    Schema Source

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    • from schema: https://w3id.org/gocam
      • -
    - - - - - - -
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    - - - - - - - - - - \ No newline at end of file diff --git a/pr-preview/pr-11/Datetime/index.html b/pr-preview/pr-11/Datetime/index.html deleted file mode 100644 index a55aa45..0000000 --- a/pr-preview/pr-11/Datetime/index.html +++ /dev/null @@ -1,364 +0,0 @@ - - - - - - - - - - - - - - - - - - Type: Datetime - gocam - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
    - -
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    Type: Datetime

    -

    The combination of a date and time

    -

    URI: xsd:dateTime

    -
      -
    • -

      base: XSDDateTime

      -
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    • -

      uri: xsd:dateTime

      -
      • -
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      repr: str

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    -

    Identifier and Mapping Information

    -

    Schema Source

    -
      -
    • from schema: https://w3id.org/gocam
      • -
    - - - - - - -
    -
    - - - - -
    - -
    - - - -
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    - - - - - - - - - - \ No newline at end of file diff --git a/pr-preview/pr-11/Decimal/index.html b/pr-preview/pr-11/Decimal/index.html deleted file mode 100644 index a65e68a..0000000 --- a/pr-preview/pr-11/Decimal/index.html +++ /dev/null @@ -1,361 +0,0 @@ - - - - - - - - - - - - - - - - - - Type: Decimal - gocam - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
    - -
    - - - - -
    - - -
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    - - - -
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    Type: Decimal

    -

    A real number with arbitrary precision that conforms to the xsd:decimal specification

    -

    URI: xsd:decimal

    -
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    • -

      base: Decimal

      -
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      uri: xsd:decimal

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    Identifier and Mapping Information

    -

    Schema Source

    -
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    • from schema: https://w3id.org/gocam
      • -
    - - - - - - -
    -
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    - - - - - - - - - - \ No newline at end of file diff --git a/pr-preview/pr-11/Double/index.html b/pr-preview/pr-11/Double/index.html deleted file mode 100644 index b81b233..0000000 --- a/pr-preview/pr-11/Double/index.html +++ /dev/null @@ -1,361 +0,0 @@ - - - - - - - - - - - - - - - - - - Type: Double - gocam - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
    - -
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    - - -
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    Type: Double

    -

    A real number that conforms to the xsd:double specification

    -

    URI: xsd:double

    -
      -
    • -

      base: float

      -
      • -
    • -

      uri: xsd:double

      -
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    Identifier and Mapping Information

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    Schema Source

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    • from schema: https://w3id.org/gocam
      • -
    - - - - - - -
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    - - - - - - - - - - \ No newline at end of file diff --git a/pr-preview/pr-11/EnabledByAssociation/index.html b/pr-preview/pr-11/EnabledByAssociation/index.html deleted file mode 100644 index b319df3..0000000 --- a/pr-preview/pr-11/EnabledByAssociation/index.html +++ /dev/null @@ -1,458 +0,0 @@ - - - - - - - - - - -Class: EnabledByAssociation - gocam - - - - - - - - - - - - -
    -
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    Class: EnabledByAssociation

    -

    An association between an activity and the gene product or complex that carries it out

    -
      -
    • NOTE: this is an abstract class and should not be instantiated directly
      • -
    -

    URI: gocam:EnabledByAssociation

    -
    classDiagram - class EnabledByAssociation - click EnabledByAssociation href "../EnabledByAssociation" - Association <|-- EnabledByAssociation - click Association href "../Association" - - - EnabledByAssociation <|-- EnabledByGeneProductAssociation - click EnabledByGeneProductAssociation href "../EnabledByGeneProductAssociation" - EnabledByAssociation <|-- EnabledByProteinComplexAssociation - click EnabledByProteinComplexAssociation href "../EnabledByProteinComplexAssociation" - - - EnabledByAssociation : evidence - - - - - EnabledByAssociation --> "*" EvidenceItem : evidence - click EvidenceItem href "../EvidenceItem" - - - EnabledByAssociation : provenances - - - - - EnabledByAssociation --> "*" ProvenanceInfo : provenances - click ProvenanceInfo href "../ProvenanceInfo" - - - EnabledByAssociation : term - - - - - EnabledByAssociation --> "0..1" InformationBiomacromoleculeTermObject : term - click InformationBiomacromoleculeTermObject href "../InformationBiomacromoleculeTermObject" - - - EnabledByAssociation : type - - -
    -

    Inheritance

    - -

    Slots

    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
    NameCardinality and RangeDescriptionInheritance
    term0..1
    InformationBiomacromoleculeTermObject    		The gene product or complex that carries out the activitydirect
    type0..1
    String    		Association
    evidence*
    EvidenceItem    		Association
    provenances*
    ProvenanceInfo    		Association
    -

    Usages

    - - - - - - - - - - - - - - - - - -
    used byused intypeused
    Activityenabled_byrangeEnabledByAssociation
    -

    Identifier and Mapping Information

    -

    Schema Source

    -
      -
    • from schema: https://w3id.org/gocam
      • -
    -

    Mappings

    - - - - - - - - - - - - - - - - - -
    Mapping TypeMapped Value
    selfgocam:EnabledByAssociation
    nativegocam:EnabledByAssociation
    -

    LinkML Source

    - -

    Direct

    -
    -
    name: EnabledByAssociation
-description: An association between an activity and the gene product or complex that
-  carries it out
-from_schema: https://w3id.org/gocam
-is_a: Association
-abstract: true
-attributes:
-  term:
-    name: term
-    description: The gene product or complex that carries out the activity
-    from_schema: https://w3id.org/gocam
-    domain_of:
-    - EvidenceItem
-    - EnabledByAssociation
-    - TermAssociation
-    range: InformationBiomacromoleculeTermObject
-
-
    -
    -

    Induced

    -
    -
    name: EnabledByAssociation
-description: An association between an activity and the gene product or complex that
-  carries it out
-from_schema: https://w3id.org/gocam
-is_a: Association
-abstract: true
-attributes:
-  term:
-    name: term
-    description: The gene product or complex that carries out the activity
-    from_schema: https://w3id.org/gocam
-    alias: term
-    owner: EnabledByAssociation
-    domain_of:
-    - EvidenceItem
-    - EnabledByAssociation
-    - TermAssociation
-    range: InformationBiomacromoleculeTermObject
-  type:
-    name: type
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    designates_type: true
-    alias: type
-    owner: EnabledByAssociation
-    domain_of:
-    - Association
-    - Object
-    range: string
-  evidence:
-    name: evidence
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    multivalued: true
-    alias: evidence
-    owner: EnabledByAssociation
-    domain_of:
-    - Association
-    range: EvidenceItem
-    inlined: true
-  provenances:
-    name: provenances
-    from_schema: https://w3id.org/gocam
-    multivalued: true
-    alias: provenances
-    owner: EnabledByAssociation
-    domain_of:
-    - Model
-    - Activity
-    - EvidenceItem
-    - Association
-    range: ProvenanceInfo
-    inlined: true
-    inlined_as_list: true
-
-
    -
    -
    -
    - -
    -
    - -
    -
    -
    -
    - - - - \ No newline at end of file diff --git a/pr-preview/pr-11/EnabledByGeneProductAssociation/index.html b/pr-preview/pr-11/EnabledByGeneProductAssociation/index.html deleted file mode 100644 index 228a695..0000000 --- a/pr-preview/pr-11/EnabledByGeneProductAssociation/index.html +++ /dev/null @@ -1,425 +0,0 @@ - - - - - - - - - - -Class: EnabledByGeneProductAssociation - gocam - - - - - - - - - - - - -
    -
    -
    - -
    -
    -
    -
    -
    -
    -
    - -
    -
    -
    -
    -
    -
    - -
    -
    -
    -
    -
    - - - -

    Class: EnabledByGeneProductAssociation

    -

    An association between an activity and a gene product

    -

    URI: gocam:EnabledByGeneProductAssociation

    -
    classDiagram - class EnabledByGeneProductAssociation - click EnabledByGeneProductAssociation href "../EnabledByGeneProductAssociation" - EnabledByAssociation <|-- EnabledByGeneProductAssociation - click EnabledByAssociation href "../EnabledByAssociation" - - EnabledByGeneProductAssociation : evidence - - - - - EnabledByGeneProductAssociation --> "*" EvidenceItem : evidence - click EvidenceItem href "../EvidenceItem" - - - EnabledByGeneProductAssociation : provenances - - - - - EnabledByGeneProductAssociation --> "*" ProvenanceInfo : provenances - click ProvenanceInfo href "../ProvenanceInfo" - - - EnabledByGeneProductAssociation : term - - - - - EnabledByGeneProductAssociation --> "0..1" GeneProductTermObject : term - click GeneProductTermObject href "../GeneProductTermObject" - - - EnabledByGeneProductAssociation : type - - -
    -

    Inheritance

    - -

    Slots

    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
    NameCardinality and RangeDescriptionInheritance
    term0..1
    GeneProductTermObject    		The gene product or complex that carries out the activityEnabledByAssociation
    type0..1
    String    		Association
    evidence*
    EvidenceItem    		Association
    provenances*
    ProvenanceInfo    		Association
    -

    Identifier and Mapping Information

    -

    Schema Source

    -
      -
    • from schema: https://w3id.org/gocam
      • -
    -

    Mappings

    - - - - - - - - - - - - - - - - - -
    Mapping TypeMapped Value
    selfgocam:EnabledByGeneProductAssociation
    nativegocam:EnabledByGeneProductAssociation
    -

    LinkML Source

    - -

    Direct

    -
    -
    name: EnabledByGeneProductAssociation
-description: An association between an activity and a gene product
-from_schema: https://w3id.org/gocam
-is_a: EnabledByAssociation
-slot_usage:
-  term:
-    name: term
-    domain_of:
-    - EvidenceItem
-    - EnabledByAssociation
-    - TermAssociation
-    range: GeneProductTermObject
-
-
    -
    -

    Induced

    -
    -
    name: EnabledByGeneProductAssociation
-description: An association between an activity and a gene product
-from_schema: https://w3id.org/gocam
-is_a: EnabledByAssociation
-slot_usage:
-  term:
-    name: term
-    domain_of:
-    - EvidenceItem
-    - EnabledByAssociation
-    - TermAssociation
-    range: GeneProductTermObject
-attributes:
-  term:
-    name: term
-    description: The gene product or complex that carries out the activity
-    from_schema: https://w3id.org/gocam
-    alias: term
-    owner: EnabledByGeneProductAssociation
-    domain_of:
-    - EvidenceItem
-    - EnabledByAssociation
-    - TermAssociation
-    range: GeneProductTermObject
-  type:
-    name: type
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    designates_type: true
-    alias: type
-    owner: EnabledByGeneProductAssociation
-    domain_of:
-    - Association
-    - Object
-    range: string
-  evidence:
-    name: evidence
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    multivalued: true
-    alias: evidence
-    owner: EnabledByGeneProductAssociation
-    domain_of:
-    - Association
-    range: EvidenceItem
-    inlined: true
-  provenances:
-    name: provenances
-    from_schema: https://w3id.org/gocam
-    multivalued: true
-    alias: provenances
-    owner: EnabledByGeneProductAssociation
-    domain_of:
-    - Model
-    - Activity
-    - EvidenceItem
-    - Association
-    range: ProvenanceInfo
-    inlined: true
-    inlined_as_list: true
-
-
    -
    -
    -
    - -
    -
    - -
    -
    -
    -
    - - - - \ No newline at end of file diff --git a/pr-preview/pr-11/EnabledByProteinComplexAssociation/index.html b/pr-preview/pr-11/EnabledByProteinComplexAssociation/index.html deleted file mode 100644 index adb80a6..0000000 --- a/pr-preview/pr-11/EnabledByProteinComplexAssociation/index.html +++ /dev/null @@ -1,461 +0,0 @@ - - - - - - - - - - -Class: EnabledByProteinComplexAssociation - gocam - - - - - - - - - - - - -
    -
    -
    - -
    -
    -
    -
    -
    -
    -
    - -
    -
    -
    -
    -
    -
    - -
    -
    -
    -
    -
    - - - -

    Class: EnabledByProteinComplexAssociation

    -

    An association between an activity and a protein complex

    -

    URI: gocam:EnabledByProteinComplexAssociation

    -
    classDiagram - class EnabledByProteinComplexAssociation - click EnabledByProteinComplexAssociation href "../EnabledByProteinComplexAssociation" - EnabledByAssociation <|-- EnabledByProteinComplexAssociation - click EnabledByAssociation href "../EnabledByAssociation" - - EnabledByProteinComplexAssociation : evidence - - - - - EnabledByProteinComplexAssociation --> "*" EvidenceItem : evidence - click EvidenceItem href "../EvidenceItem" - - - EnabledByProteinComplexAssociation : members - - - - - EnabledByProteinComplexAssociation --> "*" GeneProductTermObject : members - click GeneProductTermObject href "../GeneProductTermObject" - - - EnabledByProteinComplexAssociation : provenances - - - - - EnabledByProteinComplexAssociation --> "*" ProvenanceInfo : provenances - click ProvenanceInfo href "../ProvenanceInfo" - - - EnabledByProteinComplexAssociation : term - - - - - EnabledByProteinComplexAssociation --> "0..1" ProteinComplexTermObject : term - click ProteinComplexTermObject href "../ProteinComplexTermObject" - - - EnabledByProteinComplexAssociation : type - - -
    -

    Inheritance

    - -

    Slots

    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
    NameCardinality and RangeDescriptionInheritance
    members*
    GeneProductTermObject    		The gene products that are part of the complexdirect
    term0..1
    ProteinComplexTermObject    		The gene product or complex that carries out the activityEnabledByAssociation
    type0..1
    String    		Association
    evidence*
    EvidenceItem    		Association
    provenances*
    ProvenanceInfo    		Association
    -

    Identifier and Mapping Information

    -

    Schema Source

    -
      -
    • from schema: https://w3id.org/gocam
      • -
    -

    Mappings

    - - - - - - - - - - - - - - - - - -
    Mapping TypeMapped Value
    selfgocam:EnabledByProteinComplexAssociation
    nativegocam:EnabledByProteinComplexAssociation
    -

    LinkML Source

    - -

    Direct

    -
    -
    name: EnabledByProteinComplexAssociation
-description: An association between an activity and a protein complex
-from_schema: https://w3id.org/gocam
-is_a: EnabledByAssociation
-slot_usage:
-  term:
-    name: term
-    domain_of:
-    - EvidenceItem
-    - EnabledByAssociation
-    - TermAssociation
-    range: ProteinComplexTermObject
-attributes:
-  members:
-    name: members
-    description: The gene products that are part of the complex
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    multivalued: true
-    domain_of:
-    - EnabledByProteinComplexAssociation
-    range: GeneProductTermObject
-
-
    -
    -

    Induced

    -
    -
    name: EnabledByProteinComplexAssociation
-description: An association between an activity and a protein complex
-from_schema: https://w3id.org/gocam
-is_a: EnabledByAssociation
-slot_usage:
-  term:
-    name: term
-    domain_of:
-    - EvidenceItem
-    - EnabledByAssociation
-    - TermAssociation
-    range: ProteinComplexTermObject
-attributes:
-  members:
-    name: members
-    description: The gene products that are part of the complex
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    multivalued: true
-    alias: members
-    owner: EnabledByProteinComplexAssociation
-    domain_of:
-    - EnabledByProteinComplexAssociation
-    range: GeneProductTermObject
-  term:
-    name: term
-    description: The gene product or complex that carries out the activity
-    from_schema: https://w3id.org/gocam
-    alias: term
-    owner: EnabledByProteinComplexAssociation
-    domain_of:
-    - EvidenceItem
-    - EnabledByAssociation
-    - TermAssociation
-    range: ProteinComplexTermObject
-  type:
-    name: type
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    designates_type: true
-    alias: type
-    owner: EnabledByProteinComplexAssociation
-    domain_of:
-    - Association
-    - Object
-    range: string
-  evidence:
-    name: evidence
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    multivalued: true
-    alias: evidence
-    owner: EnabledByProteinComplexAssociation
-    domain_of:
-    - Association
-    range: EvidenceItem
-    inlined: true
-  provenances:
-    name: provenances
-    from_schema: https://w3id.org/gocam
-    multivalued: true
-    alias: provenances
-    owner: EnabledByProteinComplexAssociation
-    domain_of:
-    - Model
-    - Activity
-    - EvidenceItem
-    - Association
-    range: ProvenanceInfo
-    inlined: true
-    inlined_as_list: true
-
-
    -
    -
    -
    - -
    -
    - -
    -
    -
    -
    - - - - \ No newline at end of file diff --git a/pr-preview/pr-11/EvidenceItem/index.html b/pr-preview/pr-11/EvidenceItem/index.html deleted file mode 100644 index bf64304..0000000 --- a/pr-preview/pr-11/EvidenceItem/index.html +++ /dev/null @@ -1,537 +0,0 @@ - - - - - - - - - - -Class: EvidenceItem - gocam - - - - - - - - - - - - -
    -
    -
    - -
    -
    -
    -
    -
    -
    -
    - -
    -
    -
    -
    -
    -
    - -
    -
    -
    -
    -
    - - - -

    Class: EvidenceItem

    -

    An individual piece of evidence that is associated with an assertion in a model

    -

    URI: gocam:EvidenceItem

    -
    classDiagram - class EvidenceItem - click EvidenceItem href "../EvidenceItem" - EvidenceItem : provenances - - - - - EvidenceItem --> "*" ProvenanceInfo : provenances - click ProvenanceInfo href "../ProvenanceInfo" - - - EvidenceItem : reference - - - - - EvidenceItem --> "0..1" PublicationObject : reference - click PublicationObject href "../PublicationObject" - - - EvidenceItem : term - - - - - EvidenceItem --> "0..1" EvidenceTermObject : term - click EvidenceTermObject href "../EvidenceTermObject" - - - EvidenceItem : with_objects - - - - - EvidenceItem --> "*" Object : with_objects - click Object href "../Object" - - - -
    - -

    Slots

    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
    NameCardinality and RangeDescriptionInheritance
    term0..1
    EvidenceTermObject    		The ECO term representing the type of evidencedirect
    reference0..1
    PublicationObject    		The publication of reference that describes the evidencedirect
    with_objects*
    Object    		Supporting database entities or termsdirect
    provenances*
    ProvenanceInfo    		Provenance about the assertion, edirect
    -

    Usages

    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
    used byused intypeused
    AssociationevidencerangeEvidenceItem
    EnabledByAssociationevidencerangeEvidenceItem
    EnabledByGeneProductAssociationevidencerangeEvidenceItem
    EnabledByProteinComplexAssociationevidencerangeEvidenceItem
    CausalAssociationevidencerangeEvidenceItem
    TermAssociationevidencerangeEvidenceItem
    MolecularFunctionAssociationevidencerangeEvidenceItem
    BiologicalProcessAssociationevidencerangeEvidenceItem
    CellularAnatomicalEntityAssociationevidencerangeEvidenceItem
    CellTypeAssociationevidencerangeEvidenceItem
    GrossAnatomyAssociationevidencerangeEvidenceItem
    MoleculeAssociationevidencerangeEvidenceItem
    -

    Identifier and Mapping Information

    -

    Schema Source

    -
      -
    • from schema: https://w3id.org/gocam
      • -
    -

    Mappings

    - - - - - - - - - - - - - - - - - -
    Mapping TypeMapped Value
    selfgocam:EvidenceItem
    nativegocam:EvidenceItem
    -

    LinkML Source

    - -

    Direct

    -
    -
    name: EvidenceItem
-description: An individual piece of evidence that is associated with an assertion
-  in a model
-from_schema: https://w3id.org/gocam
-attributes:
-  term:
-    name: term
-    description: The ECO term representing the type of evidence
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    domain_of:
-    - EvidenceItem
-    - EnabledByAssociation
-    - TermAssociation
-    range: EvidenceTermObject
-  reference:
-    name: reference
-    description: The publication of reference that describes the evidence
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    domain_of:
-    - EvidenceItem
-    range: PublicationObject
-  with_objects:
-    name: with_objects
-    description: Supporting database entities or terms
-    from_schema: https://w3id.org/gocam
-    aliases:
-    - with
-    - with/from
-    rank: 1000
-    multivalued: true
-    domain_of:
-    - EvidenceItem
-    range: Object
-  provenances:
-    name: provenances
-    description: Provenance about the assertion, e.g. who made it
-    from_schema: https://w3id.org/gocam
-    multivalued: true
-    domain_of:
-    - Model
-    - Activity
-    - EvidenceItem
-    - Association
-    range: ProvenanceInfo
-    inlined: true
-    inlined_as_list: true
-
-
    -
    -

    Induced

    -
    -
    name: EvidenceItem
-description: An individual piece of evidence that is associated with an assertion
-  in a model
-from_schema: https://w3id.org/gocam
-attributes:
-  term:
-    name: term
-    description: The ECO term representing the type of evidence
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    alias: term
-    owner: EvidenceItem
-    domain_of:
-    - EvidenceItem
-    - EnabledByAssociation
-    - TermAssociation
-    range: EvidenceTermObject
-  reference:
-    name: reference
-    description: The publication of reference that describes the evidence
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    alias: reference
-    owner: EvidenceItem
-    domain_of:
-    - EvidenceItem
-    range: PublicationObject
-  with_objects:
-    name: with_objects
-    description: Supporting database entities or terms
-    from_schema: https://w3id.org/gocam
-    aliases:
-    - with
-    - with/from
-    rank: 1000
-    multivalued: true
-    alias: with_objects
-    owner: EvidenceItem
-    domain_of:
-    - EvidenceItem
-    range: Object
-  provenances:
-    name: provenances
-    description: Provenance about the assertion, e.g. who made it
-    from_schema: https://w3id.org/gocam
-    multivalued: true
-    alias: provenances
-    owner: EvidenceItem
-    domain_of:
-    - Model
-    - Activity
-    - EvidenceItem
-    - Association
-    range: ProvenanceInfo
-    inlined: true
-    inlined_as_list: true
-
-
    -
    -
    -
    - -
    -
    - -
    -
    -
    -
    - - - - \ No newline at end of file diff --git a/pr-preview/pr-11/EvidenceTermObject/index.html b/pr-preview/pr-11/EvidenceTermObject/index.html deleted file mode 100644 index 819e745..0000000 --- a/pr-preview/pr-11/EvidenceTermObject/index.html +++ /dev/null @@ -1,420 +0,0 @@ - - - - - - - - - - -Class: EvidenceTermObject - gocam - - - - - - - - - - - - -
    -
    -
    - -
    -
    -
    -
    -
    -
    -
    - -
    -
    -
    -
    -
    -
    - -
    -
    -
    -
    -
    - - - -

    Class: EvidenceTermObject

    -

    A term object that represents an evidence term from ECO

    -

    URI: gocam:EvidenceTermObject

    -
    classDiagram - class EvidenceTermObject - click EvidenceTermObject href "../EvidenceTermObject" - TermObject <|-- EvidenceTermObject - click TermObject href "../TermObject" - - EvidenceTermObject : id - - EvidenceTermObject : label - - EvidenceTermObject : obsolete - - EvidenceTermObject : type - - -
    -

    Inheritance

    - -

    Slots

    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
    NameCardinality and RangeDescriptionInheritance
    id1
    Uriorcurie    		Object
    label0..1
    String    		Object
    type0..1
    Uriorcurie    		Object
    obsolete0..1
    Boolean    		Object
    -

    Usages

    - - - - - - - - - - - - - - - - - -
    used byused intypeused
    EvidenceItemtermrangeEvidenceTermObject
    -

    Identifier and Mapping Information

    -

    Valid ID Prefixes

    -

    Instances of this class should have identifiers with one of the following prefixes:

    -
      -
    • ECO
      • -
    -

    Schema Source

    -
      -
    • from schema: https://w3id.org/gocam
      • -
    -

    Mappings

    - - - - - - - - - - - - - - - - - -
    Mapping TypeMapped Value
    selfgocam:EvidenceTermObject
    nativegocam:EvidenceTermObject
    -

    LinkML Source

    - -

    Direct

    -
    -
    name: EvidenceTermObject
-id_prefixes:
-- ECO
-description: A term object that represents an evidence term from ECO
-from_schema: https://w3id.org/gocam
-is_a: TermObject
-
-
    -
    -

    Induced

    -
    -
    name: EvidenceTermObject
-id_prefixes:
-- ECO
-description: A term object that represents an evidence term from ECO
-from_schema: https://w3id.org/gocam
-is_a: TermObject
-attributes:
-  id:
-    name: id
-    from_schema: https://w3id.org/gocam
-    identifier: true
-    alias: id
-    owner: EvidenceTermObject
-    domain_of:
-    - Model
-    - Activity
-    - Object
-    range: uriorcurie
-    required: true
-  label:
-    name: label
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    slot_uri: rdfs:label
-    alias: label
-    owner: EvidenceTermObject
-    domain_of:
-    - Object
-    range: string
-  type:
-    name: type
-    from_schema: https://w3id.org/gocam
-    designates_type: true
-    alias: type
-    owner: EvidenceTermObject
-    domain_of:
-    - Association
-    - Object
-    range: uriorcurie
-  obsolete:
-    name: obsolete
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    alias: obsolete
-    owner: EvidenceTermObject
-    domain_of:
-    - Object
-    range: boolean
-
-
    -
    -
    -
    - -
    -
    - -
    -
    -
    -
    - - - - \ No newline at end of file diff --git a/pr-preview/pr-11/Float/index.html b/pr-preview/pr-11/Float/index.html deleted file mode 100644 index 7d10d25..0000000 --- a/pr-preview/pr-11/Float/index.html +++ /dev/null @@ -1,361 +0,0 @@ - - - - - - - - - - - - - - - - - - Type: Float - gocam - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
    - -
    - - - - -
    - - -
    - -
    - - - - - - -
    -
    - - - -
    -
    -
    - - - - -
    -
    -
    - - - -
    -
    -
    - - - -
    -
    -
    - - - -
    -
    - - - - - - - - - -

    Type: Float

    -

    A real number that conforms to the xsd:float specification

    -

    URI: xsd:float

    -
      -
    • -

      base: float

      -
      • -
    • -

      uri: xsd:float

      -
      • -
    -

    Identifier and Mapping Information

    -

    Schema Source

    -
      -
    • from schema: https://w3id.org/gocam
      • -
    - - - - - - -
    -
    - - - - -
    - -
    - - - -
    -
    -
    -
    - - - - - - - - - - \ No newline at end of file diff --git a/pr-preview/pr-11/GeneProductTermObject/index.html b/pr-preview/pr-11/GeneProductTermObject/index.html deleted file mode 100644 index 279baff..0000000 --- a/pr-preview/pr-11/GeneProductTermObject/index.html +++ /dev/null @@ -1,415 +0,0 @@ - - - - - - - - - - -Class: GeneProductTermObject - gocam - - - - - - - - - - - - -
    -
    -
    - -
    -
    -
    -
    -
    -
    -
    - -
    -
    -
    -
    -
    -
    - -
    -
    -
    -
    -
    - - - -

    Class: GeneProductTermObject

    -

    A term object that represents a gene product term from GO or UniProtKB

    -

    URI: gocam:GeneProductTermObject

    -
    classDiagram - class GeneProductTermObject - click GeneProductTermObject href "../GeneProductTermObject" - InformationBiomacromoleculeTermObject <|-- GeneProductTermObject - click InformationBiomacromoleculeTermObject href "../InformationBiomacromoleculeTermObject" - - GeneProductTermObject : id - - GeneProductTermObject : label - - GeneProductTermObject : obsolete - - GeneProductTermObject : type - - -
    -

    Inheritance

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    Slots

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    NameCardinality and RangeDescriptionInheritance
    id1
    Uriorcurie    		Object
    label0..1
    String    		Object
    type0..1
    Uriorcurie    		Object
    obsolete0..1
    Boolean    		Object
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    Usages

    - - - - - - - - - - - - - - - - - - - - - - - -
    used byused intypeused
    EnabledByGeneProductAssociationtermrangeGeneProductTermObject
    EnabledByProteinComplexAssociationmembersrangeGeneProductTermObject
    -

    Identifier and Mapping Information

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    Schema Source

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      -
    • from schema: https://w3id.org/gocam
      • -
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    Mappings

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    Mapping TypeMapped Value
    selfgocam:GeneProductTermObject
    nativegocam:GeneProductTermObject
    -

    LinkML Source

    - -

    Direct

    -
    -
    name: GeneProductTermObject
-description: A term object that represents a gene product term from GO or UniProtKB
-from_schema: https://w3id.org/gocam
-is_a: InformationBiomacromoleculeTermObject
-
-
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    Induced

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    -
    name: GeneProductTermObject
-description: A term object that represents a gene product term from GO or UniProtKB
-from_schema: https://w3id.org/gocam
-is_a: InformationBiomacromoleculeTermObject
-attributes:
-  id:
-    name: id
-    from_schema: https://w3id.org/gocam
-    identifier: true
-    alias: id
-    owner: GeneProductTermObject
-    domain_of:
-    - Model
-    - Activity
-    - Object
-    range: uriorcurie
-    required: true
-  label:
-    name: label
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    slot_uri: rdfs:label
-    alias: label
-    owner: GeneProductTermObject
-    domain_of:
-    - Object
-    range: string
-  type:
-    name: type
-    from_schema: https://w3id.org/gocam
-    designates_type: true
-    alias: type
-    owner: GeneProductTermObject
-    domain_of:
-    - Association
-    - Object
-    range: uriorcurie
-  obsolete:
-    name: obsolete
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    alias: obsolete
-    owner: GeneProductTermObject
-    domain_of:
-    - Object
-    range: boolean
-
-
    -
    -
    -
    - -
    -
    - -
    -
    -
    -
    - - - - \ No newline at end of file diff --git a/pr-preview/pr-11/GrossAnatomicalStructureTermObject/index.html b/pr-preview/pr-11/GrossAnatomicalStructureTermObject/index.html deleted file mode 100644 index 88a2262..0000000 --- a/pr-preview/pr-11/GrossAnatomicalStructureTermObject/index.html +++ /dev/null @@ -1,439 +0,0 @@ - - - - - - - - - - -Class: GrossAnatomicalStructureTermObject - gocam - - - - - - - - - - - - -
    -
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    Class: GrossAnatomicalStructureTermObject

    -

    A term object that represents a gross anatomical structure term from UBERON

    -

    URI: gocam:GrossAnatomicalStructureTermObject

    -
    classDiagram - class GrossAnatomicalStructureTermObject - click GrossAnatomicalStructureTermObject href "../GrossAnatomicalStructureTermObject" - TermObject <|-- GrossAnatomicalStructureTermObject - click TermObject href "../TermObject" - - GrossAnatomicalStructureTermObject : id - - GrossAnatomicalStructureTermObject : label - - GrossAnatomicalStructureTermObject : obsolete - - GrossAnatomicalStructureTermObject : type - - -
    -

    Inheritance

    - -

    Slots

    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
    NameCardinality and RangeDescriptionInheritance
    id1
    Uriorcurie    		Object
    label0..1
    String    		Object
    type0..1
    Uriorcurie    		Object
    obsolete0..1
    Boolean    		Object
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    Usages

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    used byused intypeused
    GrossAnatomyAssociationtermrangeGrossAnatomicalStructureTermObject
    -

    Identifier and Mapping Information

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    Valid ID Prefixes

    -

    Instances of this class should have identifiers with one of the following prefixes:

    -
      -
    • -

      UBERON

      -
      • -
    • -

      PO

      -
      • -
    • -

      FAO

      -
      • -
    • -

      DDANAT

      -
      • -
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    Schema Source

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    • from schema: https://w3id.org/gocam
      • -
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    Mappings

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    Mapping TypeMapped Value
    selfgocam:GrossAnatomicalStructureTermObject
    nativegocam:GrossAnatomicalStructureTermObject
    -

    LinkML Source

    - -

    Direct

    -
    -
    name: GrossAnatomicalStructureTermObject
-id_prefixes:
-- UBERON
-- PO
-- FAO
-- DDANAT
-description: A term object that represents a gross anatomical structure term from
-  UBERON
-from_schema: https://w3id.org/gocam
-is_a: TermObject
-
-
    -
    -

    Induced

    -
    -
    name: GrossAnatomicalStructureTermObject
-id_prefixes:
-- UBERON
-- PO
-- FAO
-- DDANAT
-description: A term object that represents a gross anatomical structure term from
-  UBERON
-from_schema: https://w3id.org/gocam
-is_a: TermObject
-attributes:
-  id:
-    name: id
-    from_schema: https://w3id.org/gocam
-    identifier: true
-    alias: id
-    owner: GrossAnatomicalStructureTermObject
-    domain_of:
-    - Model
-    - Activity
-    - Object
-    range: uriorcurie
-    required: true
-  label:
-    name: label
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    slot_uri: rdfs:label
-    alias: label
-    owner: GrossAnatomicalStructureTermObject
-    domain_of:
-    - Object
-    range: string
-  type:
-    name: type
-    from_schema: https://w3id.org/gocam
-    designates_type: true
-    alias: type
-    owner: GrossAnatomicalStructureTermObject
-    domain_of:
-    - Association
-    - Object
-    range: uriorcurie
-  obsolete:
-    name: obsolete
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    alias: obsolete
-    owner: GrossAnatomicalStructureTermObject
-    domain_of:
-    - Object
-    range: boolean
-
-
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    - - - - \ No newline at end of file diff --git a/pr-preview/pr-11/GrossAnatomyAssociation/index.html b/pr-preview/pr-11/GrossAnatomyAssociation/index.html deleted file mode 100644 index 3eb7a01..0000000 --- a/pr-preview/pr-11/GrossAnatomyAssociation/index.html +++ /dev/null @@ -1,431 +0,0 @@ - - - - - - - - - - -Class: GrossAnatomyAssociation - gocam - - - - - - - - - - - - -
    -
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    Class: GrossAnatomyAssociation

    -

    An association between an activity and a gross anatomical structure term

    -

    URI: gocam:GrossAnatomyAssociation

    -
    classDiagram - class GrossAnatomyAssociation - click GrossAnatomyAssociation href "../GrossAnatomyAssociation" - TermAssociation <|-- GrossAnatomyAssociation - click TermAssociation href "../TermAssociation" - - GrossAnatomyAssociation : evidence - - - - - GrossAnatomyAssociation --> "*" EvidenceItem : evidence - click EvidenceItem href "../EvidenceItem" - - - GrossAnatomyAssociation : provenances - - - - - GrossAnatomyAssociation --> "*" ProvenanceInfo : provenances - click ProvenanceInfo href "../ProvenanceInfo" - - - GrossAnatomyAssociation : term - - - - - GrossAnatomyAssociation --> "0..1" GrossAnatomicalStructureTermObject : term - click GrossAnatomicalStructureTermObject href "../GrossAnatomicalStructureTermObject" - - - GrossAnatomyAssociation : type - - -
    -

    Inheritance

    - -

    Slots

    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
    NameCardinality and RangeDescriptionInheritance
    term0..1
    GrossAnatomicalStructureTermObject    		The ontology term that describes the nature of the associationTermAssociation
    type0..1
    String    		Association
    evidence*
    EvidenceItem    		Association
    provenances*
    ProvenanceInfo    		Association
    -

    Identifier and Mapping Information

    -

    Schema Source

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      -
    • from schema: https://w3id.org/gocam
      • -
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    Mappings

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    Mapping TypeMapped Value
    selfgocam:GrossAnatomyAssociation
    nativegocam:GrossAnatomyAssociation
    -

    LinkML Source

    - -

    Direct

    -
    -
    name: GrossAnatomyAssociation
-description: An association between an activity and a gross anatomical structure term
-from_schema: https://w3id.org/gocam
-is_a: TermAssociation
-slot_usage:
-  term:
-    name: term
-    domain_of:
-    - EvidenceItem
-    - EnabledByAssociation
-    - TermAssociation
-    range: GrossAnatomicalStructureTermObject
-  part_of:
-    name: part_of
-    range: GrossAnatomyAssociation
-
-
    -
    -

    Induced

    -
    -
    name: GrossAnatomyAssociation
-description: An association between an activity and a gross anatomical structure term
-from_schema: https://w3id.org/gocam
-is_a: TermAssociation
-slot_usage:
-  term:
-    name: term
-    domain_of:
-    - EvidenceItem
-    - EnabledByAssociation
-    - TermAssociation
-    range: GrossAnatomicalStructureTermObject
-  part_of:
-    name: part_of
-    range: GrossAnatomyAssociation
-attributes:
-  term:
-    name: term
-    description: The ontology term that describes the nature of the association
-    from_schema: https://w3id.org/gocam
-    alias: term
-    owner: GrossAnatomyAssociation
-    domain_of:
-    - EvidenceItem
-    - EnabledByAssociation
-    - TermAssociation
-    range: GrossAnatomicalStructureTermObject
-  type:
-    name: type
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    designates_type: true
-    alias: type
-    owner: GrossAnatomyAssociation
-    domain_of:
-    - Association
-    - Object
-    range: string
-  evidence:
-    name: evidence
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    multivalued: true
-    alias: evidence
-    owner: GrossAnatomyAssociation
-    domain_of:
-    - Association
-    range: EvidenceItem
-    inlined: true
-  provenances:
-    name: provenances
-    from_schema: https://w3id.org/gocam
-    multivalued: true
-    alias: provenances
-    owner: GrossAnatomyAssociation
-    domain_of:
-    - Model
-    - Activity
-    - EvidenceItem
-    - Association
-    range: ProvenanceInfo
-    inlined: true
-    inlined_as_list: true
-
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    - - - - \ No newline at end of file diff --git a/pr-preview/pr-11/InformationBiomacromoleculeCategory/index.html b/pr-preview/pr-11/InformationBiomacromoleculeCategory/index.html deleted file mode 100644 index c55f990..0000000 --- a/pr-preview/pr-11/InformationBiomacromoleculeCategory/index.html +++ /dev/null @@ -1,418 +0,0 @@ - - - - - - - - - - - - - - - - - - Enum: InformationBiomacromoleculeCategory - gocam - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
    - -
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    Enum: InformationBiomacromoleculeCategory

    -

    URI: InformationBiomacromoleculeCategory

    -

    Permissible Values

    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
    ValueMeaningDescription
    GeneOrReferenceProteinbiolink.GeneOrGeneProduct
    ProteinIsoformNone
    MacromolecularComplexNone
    UnknownNone
    -

    Identifier and Mapping Information

    -

    Schema Source

    -
      -
    • from schema: https://w3id.org/gocam
      • -
    -

    LinkML Source

    -
    - -
    name: InformationBiomacromoleculeCategory
-from_schema: https://w3id.org/gocam
-rank: 1000
-permissible_values:
-  GeneOrReferenceProtein:
-    text: GeneOrReferenceProtein
-    meaning: biolink.GeneOrGeneProduct
-  ProteinIsoform:
-    text: ProteinIsoform
-  MacromolecularComplex:
-    text: MacromolecularComplex
-  Unknown:
-    text: Unknown
-
-
    - -
    - - - - - - -
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    - - - -
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    - - - - - - - - - - \ No newline at end of file diff --git a/pr-preview/pr-11/InformationBiomacromoleculeTermObject/index.html b/pr-preview/pr-11/InformationBiomacromoleculeTermObject/index.html deleted file mode 100644 index b5a673a..0000000 --- a/pr-preview/pr-11/InformationBiomacromoleculeTermObject/index.html +++ /dev/null @@ -1,422 +0,0 @@ - - - - - - - - - - -Class: InformationBiomacromoleculeTermObject - gocam - - - - - - - - - - - - -
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    Class: InformationBiomacromoleculeTermObject

    -

    An abstract class for all information biomacromolecule term objects

    -
      -
    • NOTE: this is an abstract class and should not be instantiated directly
      • -
    -

    URI: gocam:InformationBiomacromoleculeTermObject

    -
    classDiagram - class InformationBiomacromoleculeTermObject - click InformationBiomacromoleculeTermObject href "../InformationBiomacromoleculeTermObject" - TermObject <|-- InformationBiomacromoleculeTermObject - click TermObject href "../TermObject" - - - InformationBiomacromoleculeTermObject <|-- GeneProductTermObject - click GeneProductTermObject href "../GeneProductTermObject" - InformationBiomacromoleculeTermObject <|-- ProteinComplexTermObject - click ProteinComplexTermObject href "../ProteinComplexTermObject" - - - InformationBiomacromoleculeTermObject : id - - InformationBiomacromoleculeTermObject : label - - InformationBiomacromoleculeTermObject : obsolete - - InformationBiomacromoleculeTermObject : type - - -
    -

    Inheritance

    - -

    Slots

    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
    NameCardinality and RangeDescriptionInheritance
    id1
    Uriorcurie    		Object
    label0..1
    String    		Object
    type0..1
    Uriorcurie    		Object
    obsolete0..1
    Boolean    		Object
    -

    Usages

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    used byused intypeused
    EnabledByAssociationtermrangeInformationBiomacromoleculeTermObject
    -

    Identifier and Mapping Information

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    Schema Source

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    • from schema: https://w3id.org/gocam
      • -
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    Mappings

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    Mapping TypeMapped Value
    selfgocam:InformationBiomacromoleculeTermObject
    nativegocam:InformationBiomacromoleculeTermObject
    -

    LinkML Source

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    Direct

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    name: InformationBiomacromoleculeTermObject
-description: An abstract class for all information biomacromolecule term objects
-from_schema: https://w3id.org/gocam
-is_a: TermObject
-abstract: true
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    Induced

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    name: InformationBiomacromoleculeTermObject
-description: An abstract class for all information biomacromolecule term objects
-from_schema: https://w3id.org/gocam
-is_a: TermObject
-abstract: true
-attributes:
-  id:
-    name: id
-    from_schema: https://w3id.org/gocam
-    identifier: true
-    alias: id
-    owner: InformationBiomacromoleculeTermObject
-    domain_of:
-    - Model
-    - Activity
-    - Object
-    range: uriorcurie
-    required: true
-  label:
-    name: label
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    slot_uri: rdfs:label
-    alias: label
-    owner: InformationBiomacromoleculeTermObject
-    domain_of:
-    - Object
-    range: string
-  type:
-    name: type
-    from_schema: https://w3id.org/gocam
-    designates_type: true
-    alias: type
-    owner: InformationBiomacromoleculeTermObject
-    domain_of:
-    - Association
-    - Object
-    range: uriorcurie
-  obsolete:
-    name: obsolete
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    alias: obsolete
-    owner: InformationBiomacromoleculeTermObject
-    domain_of:
-    - Object
-    range: boolean
-
-
    -
    -
    -
    - -
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    - -
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    - - - - \ No newline at end of file diff --git a/pr-preview/pr-11/Integer/index.html b/pr-preview/pr-11/Integer/index.html deleted file mode 100644 index e54dc46..0000000 --- a/pr-preview/pr-11/Integer/index.html +++ /dev/null @@ -1,361 +0,0 @@ - - - - - - - - - - - - - - - - - - Type: Integer - gocam - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
    - -
    - - - - -
    - - -
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    Type: Integer

    -

    An integer

    -

    URI: xsd:integer

    -
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    • -

      base: int

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      uri: xsd:integer

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    -

    Identifier and Mapping Information

    -

    Schema Source

    -
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    • from schema: https://w3id.org/gocam
      • -
    - - - - - - -
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    - - - - - - - - - - \ No newline at end of file diff --git a/pr-preview/pr-11/Jsonpath/index.html b/pr-preview/pr-11/Jsonpath/index.html deleted file mode 100644 index 2fed92d..0000000 --- a/pr-preview/pr-11/Jsonpath/index.html +++ /dev/null @@ -1,364 +0,0 @@ - - - - - - - - - - - - - - - - - - Type: Jsonpath - gocam - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
    - -
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    Type: Jsonpath

    -

    A string encoding a JSON Path. The value of the string MUST conform to JSON Point syntax and SHOULD dereference to zero or more valid objects within the current instance document when encoded in tree form.

    -

    URI: xsd:string

    - -

    Identifier and Mapping Information

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    Schema Source

    -
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    • from schema: https://w3id.org/gocam
      • -
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    - - - - - - - - - - \ No newline at end of file diff --git a/pr-preview/pr-11/Jsonpointer/index.html b/pr-preview/pr-11/Jsonpointer/index.html deleted file mode 100644 index fae3161..0000000 --- a/pr-preview/pr-11/Jsonpointer/index.html +++ /dev/null @@ -1,364 +0,0 @@ - - - - - - - - - - - - - - - - - - Type: Jsonpointer - gocam - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
    - -
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    Type: Jsonpointer

    -

    A string encoding a JSON Pointer. The value of the string MUST conform to JSON Point syntax and SHOULD dereference to a valid object within the current instance document when encoded in tree form.

    -

    URI: xsd:string

    - -

    Identifier and Mapping Information

    -

    Schema Source

    -
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    • from schema: https://w3id.org/gocam
      • -
    - - - - - - -
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    - - - - - - - - - - \ No newline at end of file diff --git a/pr-preview/pr-11/Model/index.html b/pr-preview/pr-11/Model/index.html deleted file mode 100644 index d350f86..0000000 --- a/pr-preview/pr-11/Model/index.html +++ /dev/null @@ -1,580 +0,0 @@ - - - - - - - - - - -Class: Model - gocam - - - - - - - - - - - - -
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    Class: Model

    -

    A model of a biological program consisting of a set of causally connected activities

    -

    URI: gocam:Model

    -
    classDiagram - class Model - click Model href "../Model" - Model : activities - - - - - Model --> "*" Activity : activities - click Activity href "../Activity" - - - Model : comments - - Model : id - - Model : objects - - - - - Model --> "*" Object : objects - click Object href "../Object" - - - Model : provenances - - - - - Model --> "*" ProvenanceInfo : provenances - click ProvenanceInfo href "../ProvenanceInfo" - - - Model : status - - - - - Model --> "0..1" ModelStateEnum : status - click ModelStateEnum href "../ModelStateEnum" - - - Model : taxon - - - - - Model --> "0..1" TaxonTermObject : taxon - click TaxonTermObject href "../TaxonTermObject" - - - Model : title - - -
    - -

    Slots

    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
    NameCardinality and RangeDescriptionInheritance
    id1
    Uriorcurie    		The identifier of the modeldirect
    title0..1
    String    		The human-readable descriptive title of the modeldirect
    taxon0..1
    TaxonTermObject    		The primary taxon that the model is aboutdirect
    status0..1
    ModelStateEnum    		The status of the modeldirect
    comments*
    String    		Comments about the modeldirect
    activities*
    Activity    		All of the activities that are part of the modeldirect
    objects*
    Object    		All of the objects that are part of the modeldirect
    provenances*
    ProvenanceInfo    		Model-level provenance informationdirect
    -

    Identifier and Mapping Information

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    Schema Source

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    • from schema: https://w3id.org/gocam
      • -
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    Mappings

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    Mapping TypeMapped Value
    selfgocam:Model
    nativegocam:Model
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    LinkML Source

    - -

    Direct

    -
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    name: Model
-description: A model of a biological program consisting of a set of causally connected
-  activities
-from_schema: https://w3id.org/gocam
-attributes:
-  id:
-    name: id
-    description: The identifier of the model. Should be in gocam namespace.
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    identifier: true
-    domain_of:
-    - Model
-    - Activity
-    - Object
-    range: uriorcurie
-    required: true
-  title:
-    name: title
-    description: The human-readable descriptive title of the model
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    slot_uri: dct:title
-    domain_of:
-    - Model
-  taxon:
-    name: taxon
-    description: The primary taxon that the model is about
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    domain_of:
-    - Model
-    range: TaxonTermObject
-  status:
-    name: status
-    description: The status of the model
-    from_schema: https://w3id.org/gocam
-    aliases:
-    - model state
-    rank: 1000
-    slot_uri: pav:status
-    domain_of:
-    - Model
-    range: ModelStateEnum
-  comments:
-    name: comments
-    description: Comments about the model
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    slot_uri: rdfs:comment
-    multivalued: true
-    domain_of:
-    - Model
-  activities:
-    name: activities
-    description: All of the activities that are part of the model
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    multivalued: true
-    domain_of:
-    - Model
-    range: Activity
-    inlined: true
-    inlined_as_list: true
-  objects:
-    name: objects
-    description: All of the objects that are part of the model. This includes terms
-      as well as publications and database objects like gene. This is not strictly
-      part of the data managed by the model, it is for convenience, and should be
-      refreshed from outside.
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    multivalued: true
-    domain_of:
-    - Model
-    range: Object
-    inlined: true
-    inlined_as_list: true
-  provenances:
-    name: provenances
-    description: Model-level provenance information
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    multivalued: true
-    domain_of:
-    - Model
-    - Activity
-    - EvidenceItem
-    - Association
-    range: ProvenanceInfo
-    inlined: true
-    inlined_as_list: true
-
-
    -
    -

    Induced

    -
    -
    name: Model
-description: A model of a biological program consisting of a set of causally connected
-  activities
-from_schema: https://w3id.org/gocam
-attributes:
-  id:
-    name: id
-    description: The identifier of the model. Should be in gocam namespace.
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    identifier: true
-    alias: id
-    owner: Model
-    domain_of:
-    - Model
-    - Activity
-    - Object
-    range: uriorcurie
-  title:
-    name: title
-    description: The human-readable descriptive title of the model
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    slot_uri: dct:title
-    alias: title
-    owner: Model
-    domain_of:
-    - Model
-    range: string
-  taxon:
-    name: taxon
-    description: The primary taxon that the model is about
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    alias: taxon
-    owner: Model
-    domain_of:
-    - Model
-    range: TaxonTermObject
-  status:
-    name: status
-    description: The status of the model
-    from_schema: https://w3id.org/gocam
-    aliases:
-    - model state
-    rank: 1000
-    slot_uri: pav:status
-    alias: status
-    owner: Model
-    domain_of:
-    - Model
-    range: ModelStateEnum
-  comments:
-    name: comments
-    description: Comments about the model
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    slot_uri: rdfs:comment
-    multivalued: true
-    alias: comments
-    owner: Model
-    domain_of:
-    - Model
-    range: string
-  activities:
-    name: activities
-    description: All of the activities that are part of the model
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    multivalued: true
-    alias: activities
-    owner: Model
-    domain_of:
-    - Model
-    range: Activity
-    inlined_as_list: true
-  objects:
-    name: objects
-    description: All of the objects that are part of the model. This includes terms
-      as well as publications and database objects like gene. This is not strictly
-      part of the data managed by the model, it is for convenience, and should be
-      refreshed from outside.
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    multivalued: true
-    alias: objects
-    owner: Model
-    domain_of:
-    - Model
-    range: Object
-    inlined_as_list: true
-  provenances:
-    name: provenances
-    description: Model-level provenance information
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    multivalued: true
-    alias: provenances
-    owner: Model
-    domain_of:
-    - Model
-    - Activity
-    - EvidenceItem
-    - Association
-    range: ProvenanceInfo
-    inlined_as_list: true
-
-
    -
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    - - - - \ No newline at end of file diff --git a/pr-preview/pr-11/ModelStateEnum/index.html b/pr-preview/pr-11/ModelStateEnum/index.html deleted file mode 100644 index 01e5b1d..0000000 --- a/pr-preview/pr-11/ModelStateEnum/index.html +++ /dev/null @@ -1,427 +0,0 @@ - - - - - - - - - - - - - - - - - - Enum: ModelStateEnum - gocam - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
    - -
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    - - - - - - - - - -

    Enum: ModelStateEnum

    -

    Status of a model

    -

    URI: ModelStateEnum

    -

    Permissible Values

    - - - - - - - - - - - - - - - - - - - - -
    ValueMeaningDescription
    productionNone
    developmentNone
    -

    Slots

    - - - - - - - - - - - - - -
    NameDescription
    statusThe status of the model
    -

    Identifier and Mapping Information

    -

    Schema Source

    -
      -
    • from schema: https://w3id.org/gocam
      • -
    -

    LinkML Source

    -
    - -
    name: ModelStateEnum
-description: Status of a model
-from_schema: https://w3id.org/gocam
-rank: 1000
-permissible_values:
-  production:
-    text: production
-  development:
-    text: development
-
-
    - -
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    - - - - - - - - - - \ No newline at end of file diff --git a/pr-preview/pr-11/MolecularFunctionAssociation/index.html b/pr-preview/pr-11/MolecularFunctionAssociation/index.html deleted file mode 100644 index 489229f..0000000 --- a/pr-preview/pr-11/MolecularFunctionAssociation/index.html +++ /dev/null @@ -1,462 +0,0 @@ - - - - - - - - - - -Class: MolecularFunctionAssociation - gocam - - - - - - - - - - - - -
    -
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    - - - -

    Class: MolecularFunctionAssociation

    -

    An association between an activity and a molecular function term

    -

    URI: gocam:MolecularFunctionAssociation

    -
    classDiagram - class MolecularFunctionAssociation - click MolecularFunctionAssociation href "../MolecularFunctionAssociation" - TermAssociation <|-- MolecularFunctionAssociation - click TermAssociation href "../TermAssociation" - - MolecularFunctionAssociation : evidence - - - - - MolecularFunctionAssociation --> "*" EvidenceItem : evidence - click EvidenceItem href "../EvidenceItem" - - - MolecularFunctionAssociation : provenances - - - - - MolecularFunctionAssociation --> "*" ProvenanceInfo : provenances - click ProvenanceInfo href "../ProvenanceInfo" - - - MolecularFunctionAssociation : term - - - - - MolecularFunctionAssociation --> "0..1" MolecularFunctionTermObject : term - click MolecularFunctionTermObject href "../MolecularFunctionTermObject" - - - MolecularFunctionAssociation : type - - -
    -

    Inheritance

    - -

    Slots

    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
    NameCardinality and RangeDescriptionInheritance
    term0..1
    MolecularFunctionTermObject    		The ontology term that describes the nature of the associationTermAssociation
    type0..1
    String    		Association
    evidence*
    EvidenceItem    		Association
    provenances*
    ProvenanceInfo    		Association
    -

    Usages

    - - - - - - - - - - - - - - - - - -
    used byused intypeused
    Activitymolecular_functionrangeMolecularFunctionAssociation
    -

    TODOs

    -
      -
    • account for non-MF activity types in Reactome
      • -
    -

    Identifier and Mapping Information

    -

    Schema Source

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      -
    • from schema: https://w3id.org/gocam
      • -
    -

    Mappings

    - - - - - - - - - - - - - - - - - -
    Mapping TypeMapped Value
    selfgocam:MolecularFunctionAssociation
    nativegocam:MolecularFunctionAssociation
    -

    LinkML Source

    - -

    Direct

    -
    -
    name: MolecularFunctionAssociation
-description: An association between an activity and a molecular function term
-todos:
-- account for non-MF activity types in Reactome
-from_schema: https://w3id.org/gocam
-is_a: TermAssociation
-slot_usage:
-  term:
-    name: term
-    domain_of:
-    - EvidenceItem
-    - EnabledByAssociation
-    - TermAssociation
-    range: MolecularFunctionTermObject
-
-
    -
    -

    Induced

    -
    -
    name: MolecularFunctionAssociation
-description: An association between an activity and a molecular function term
-todos:
-- account for non-MF activity types in Reactome
-from_schema: https://w3id.org/gocam
-is_a: TermAssociation
-slot_usage:
-  term:
-    name: term
-    domain_of:
-    - EvidenceItem
-    - EnabledByAssociation
-    - TermAssociation
-    range: MolecularFunctionTermObject
-attributes:
-  term:
-    name: term
-    description: The ontology term that describes the nature of the association
-    from_schema: https://w3id.org/gocam
-    alias: term
-    owner: MolecularFunctionAssociation
-    domain_of:
-    - EvidenceItem
-    - EnabledByAssociation
-    - TermAssociation
-    range: MolecularFunctionTermObject
-  type:
-    name: type
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    designates_type: true
-    alias: type
-    owner: MolecularFunctionAssociation
-    domain_of:
-    - Association
-    - Object
-    range: string
-  evidence:
-    name: evidence
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    multivalued: true
-    alias: evidence
-    owner: MolecularFunctionAssociation
-    domain_of:
-    - Association
-    range: EvidenceItem
-    inlined: true
-  provenances:
-    name: provenances
-    from_schema: https://w3id.org/gocam
-    multivalued: true
-    alias: provenances
-    owner: MolecularFunctionAssociation
-    domain_of:
-    - Model
-    - Activity
-    - EvidenceItem
-    - Association
-    range: ProvenanceInfo
-    inlined: true
-    inlined_as_list: true
-
-
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    - - - - \ No newline at end of file diff --git a/pr-preview/pr-11/MolecularFunctionTermObject/index.html b/pr-preview/pr-11/MolecularFunctionTermObject/index.html deleted file mode 100644 index f295371..0000000 --- a/pr-preview/pr-11/MolecularFunctionTermObject/index.html +++ /dev/null @@ -1,420 +0,0 @@ - - - - - - - - - - -Class: MolecularFunctionTermObject - gocam - - - - - - - - - - - - -
    -
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    - - - -

    Class: MolecularFunctionTermObject

    -

    A term object that represents a molecular function term from GO

    -

    URI: gocam:MolecularFunctionTermObject

    -
    classDiagram - class MolecularFunctionTermObject - click MolecularFunctionTermObject href "../MolecularFunctionTermObject" - TermObject <|-- MolecularFunctionTermObject - click TermObject href "../TermObject" - - MolecularFunctionTermObject : id - - MolecularFunctionTermObject : label - - MolecularFunctionTermObject : obsolete - - MolecularFunctionTermObject : type - - -
    -

    Inheritance

    - -

    Slots

    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
    NameCardinality and RangeDescriptionInheritance
    id1
    Uriorcurie    		Object
    label0..1
    String    		Object
    type0..1
    Uriorcurie    		Object
    obsolete0..1
    Boolean    		Object
    -

    Usages

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    used byused intypeused
    MolecularFunctionAssociationtermrangeMolecularFunctionTermObject
    -

    Identifier and Mapping Information

    -

    Valid ID Prefixes

    -

    Instances of this class should have identifiers with one of the following prefixes:

    -
      -
    • GO
      • -
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    Schema Source

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    • from schema: https://w3id.org/gocam
      • -
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    Mappings

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    Mapping TypeMapped Value
    selfgocam:MolecularFunctionTermObject
    nativegocam:MolecularFunctionTermObject
    -

    LinkML Source

    - -

    Direct

    -
    -
    name: MolecularFunctionTermObject
-id_prefixes:
-- GO
-description: A term object that represents a molecular function term from GO
-from_schema: https://w3id.org/gocam
-is_a: TermObject
-
-
    -
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    Induced

    -
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    name: MolecularFunctionTermObject
-id_prefixes:
-- GO
-description: A term object that represents a molecular function term from GO
-from_schema: https://w3id.org/gocam
-is_a: TermObject
-attributes:
-  id:
-    name: id
-    from_schema: https://w3id.org/gocam
-    identifier: true
-    alias: id
-    owner: MolecularFunctionTermObject
-    domain_of:
-    - Model
-    - Activity
-    - Object
-    range: uriorcurie
-    required: true
-  label:
-    name: label
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    slot_uri: rdfs:label
-    alias: label
-    owner: MolecularFunctionTermObject
-    domain_of:
-    - Object
-    range: string
-  type:
-    name: type
-    from_schema: https://w3id.org/gocam
-    designates_type: true
-    alias: type
-    owner: MolecularFunctionTermObject
-    domain_of:
-    - Association
-    - Object
-    range: uriorcurie
-  obsolete:
-    name: obsolete
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    alias: obsolete
-    owner: MolecularFunctionTermObject
-    domain_of:
-    - Object
-    range: boolean
-
-
    -
    -
    -
    - -
    -
    - -
    -
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    - - - - \ No newline at end of file diff --git a/pr-preview/pr-11/MoleculeAssociation/index.html b/pr-preview/pr-11/MoleculeAssociation/index.html deleted file mode 100644 index e7306d6..0000000 --- a/pr-preview/pr-11/MoleculeAssociation/index.html +++ /dev/null @@ -1,467 +0,0 @@ - - - - - - - - - - -Class: MoleculeAssociation - gocam - - - - - - - - - - - - -
    -
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    Class: MoleculeAssociation

    -

    An association between an activity and a molecule term

    -

    URI: gocam:MoleculeAssociation

    -
    classDiagram - class MoleculeAssociation - click MoleculeAssociation href "../MoleculeAssociation" - TermAssociation <|-- MoleculeAssociation - click TermAssociation href "../TermAssociation" - - MoleculeAssociation : evidence - - - - - MoleculeAssociation --> "*" EvidenceItem : evidence - click EvidenceItem href "../EvidenceItem" - - - MoleculeAssociation : provenances - - - - - MoleculeAssociation --> "*" ProvenanceInfo : provenances - click ProvenanceInfo href "../ProvenanceInfo" - - - MoleculeAssociation : term - - - - - MoleculeAssociation --> "0..1" MoleculeTermObject : term - click MoleculeTermObject href "../MoleculeTermObject" - - - MoleculeAssociation : type - - -
    -

    Inheritance

    - -

    Slots

    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
    NameCardinality and RangeDescriptionInheritance
    term0..1
    MoleculeTermObject    		The ontology term that describes the nature of the associationTermAssociation
    type0..1
    String    		Association
    evidence*
    EvidenceItem    		Association
    provenances*
    ProvenanceInfo    		Association
    -

    Usages

    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
    used byused intypeused
    Activityhas_inputrangeMoleculeAssociation
    Activityhas_primary_inputrangeMoleculeAssociation
    Activityhas_outputrangeMoleculeAssociation
    Activityhas_primary_outputrangeMoleculeAssociation
    -

    Identifier and Mapping Information

    -

    Schema Source

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      -
    • from schema: https://w3id.org/gocam
      • -
    -

    Mappings

    - - - - - - - - - - - - - - - - - -
    Mapping TypeMapped Value
    selfgocam:MoleculeAssociation
    nativegocam:MoleculeAssociation
    -

    LinkML Source

    - -

    Direct

    -
    -
    name: MoleculeAssociation
-description: An association between an activity and a molecule term
-from_schema: https://w3id.org/gocam
-is_a: TermAssociation
-slot_usage:
-  term:
-    name: term
-    domain_of:
-    - EvidenceItem
-    - EnabledByAssociation
-    - TermAssociation
-    range: MoleculeTermObject
-
-
    -
    -

    Induced

    -
    -
    name: MoleculeAssociation
-description: An association between an activity and a molecule term
-from_schema: https://w3id.org/gocam
-is_a: TermAssociation
-slot_usage:
-  term:
-    name: term
-    domain_of:
-    - EvidenceItem
-    - EnabledByAssociation
-    - TermAssociation
-    range: MoleculeTermObject
-attributes:
-  term:
-    name: term
-    description: The ontology term that describes the nature of the association
-    from_schema: https://w3id.org/gocam
-    alias: term
-    owner: MoleculeAssociation
-    domain_of:
-    - EvidenceItem
-    - EnabledByAssociation
-    - TermAssociation
-    range: MoleculeTermObject
-  type:
-    name: type
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    designates_type: true
-    alias: type
-    owner: MoleculeAssociation
-    domain_of:
-    - Association
-    - Object
-    range: string
-  evidence:
-    name: evidence
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    multivalued: true
-    alias: evidence
-    owner: MoleculeAssociation
-    domain_of:
-    - Association
-    range: EvidenceItem
-    inlined: true
-  provenances:
-    name: provenances
-    from_schema: https://w3id.org/gocam
-    multivalued: true
-    alias: provenances
-    owner: MoleculeAssociation
-    domain_of:
-    - Model
-    - Activity
-    - EvidenceItem
-    - Association
-    range: ProvenanceInfo
-    inlined: true
-    inlined_as_list: true
-
-
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    - - - - \ No newline at end of file diff --git a/pr-preview/pr-11/MoleculeTermObject/index.html b/pr-preview/pr-11/MoleculeTermObject/index.html deleted file mode 100644 index 101c6d5..0000000 --- a/pr-preview/pr-11/MoleculeTermObject/index.html +++ /dev/null @@ -1,427 +0,0 @@ - - - - - - - - - - -Class: MoleculeTermObject - gocam - - - - - - - - - - - - -
    -
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    - - - -

    Class: MoleculeTermObject

    -

    A term object that represents a molecule term from CHEBI or UniProtKB

    -

    URI: gocam:MoleculeTermObject

    -
    classDiagram - class MoleculeTermObject - click MoleculeTermObject href "../MoleculeTermObject" - TermObject <|-- MoleculeTermObject - click TermObject href "../TermObject" - - MoleculeTermObject : id - - MoleculeTermObject : label - - MoleculeTermObject : obsolete - - MoleculeTermObject : type - - -
    -

    Inheritance

    - -

    Slots

    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
    NameCardinality and RangeDescriptionInheritance
    id1
    Uriorcurie    		Object
    label0..1
    String    		Object
    type0..1
    Uriorcurie    		Object
    obsolete0..1
    Boolean    		Object
    -

    Usages

    - - - - - - - - - - - - - - - - - -
    used byused intypeused
    MoleculeAssociationtermrangeMoleculeTermObject
    -

    Identifier and Mapping Information

    -

    Valid ID Prefixes

    -

    Instances of this class should have identifiers with one of the following prefixes:

    -
      -
    • -

      CHEBI

      -
      • -
    • -

      UniProtKB

      -
      • -
    -

    Schema Source

    -
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    • from schema: https://w3id.org/gocam
      • -
    -

    Mappings

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    Mapping TypeMapped Value
    selfgocam:MoleculeTermObject
    nativegocam:MoleculeTermObject
    -

    LinkML Source

    - -

    Direct

    -
    -
    name: MoleculeTermObject
-id_prefixes:
-- CHEBI
-- UniProtKB
-description: A term object that represents a molecule term from CHEBI or UniProtKB
-from_schema: https://w3id.org/gocam
-is_a: TermObject
-
-
    -
    -

    Induced

    -
    -
    name: MoleculeTermObject
-id_prefixes:
-- CHEBI
-- UniProtKB
-description: A term object that represents a molecule term from CHEBI or UniProtKB
-from_schema: https://w3id.org/gocam
-is_a: TermObject
-attributes:
-  id:
-    name: id
-    from_schema: https://w3id.org/gocam
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    - - - - \ No newline at end of file diff --git a/pr-preview/pr-11/Ncname/index.html b/pr-preview/pr-11/Ncname/index.html deleted file mode 100644 index 872e685..0000000 --- a/pr-preview/pr-11/Ncname/index.html +++ /dev/null @@ -1,364 +0,0 @@ - - - - - - - - - - - - - - - - - - Type: Ncname - gocam - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
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    Type: Ncname

    -

    Prefix part of CURIE

    -

    URI: xsd:string

    -
      -
    • -

      base: NCName

      -
      • -
    • -

      uri: xsd:string

      -
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    • -

      repr: str

      -
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    Identifier and Mapping Information

    -

    Schema Source

    -
      -
    • from schema: https://w3id.org/gocam
      • -
    - - - - - - -
    -
    - - - - -
    - -
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    - - - - - - - - - - \ No newline at end of file diff --git a/pr-preview/pr-11/Nodeidentifier/index.html b/pr-preview/pr-11/Nodeidentifier/index.html deleted file mode 100644 index 7c7ebf1..0000000 --- a/pr-preview/pr-11/Nodeidentifier/index.html +++ /dev/null @@ -1,364 +0,0 @@ - - - - - - - - - - - - - - - - - - Type: Nodeidentifier - gocam - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
    - -
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    - - - -
    -
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    - - - -
    -
    -
    - - - -
    -
    - - - - - - - - - -

    Type: Nodeidentifier

    -

    A URI, CURIE or BNODE that represents a node in a model.

    -

    URI: shex:nonLiteral

    -
      -
    • -

      base: NodeIdentifier

      -
      • -
    • -

      uri: shex:nonLiteral

      -
      • -
    • -

      repr: str

      -
      • -
    -

    Identifier and Mapping Information

    -

    Schema Source

    -
      -
    • from schema: https://w3id.org/gocam
      • -
    - - - - - - -
    -
    - - - - -
    - -
    - - - -
    -
    -
    -
    - - - - - - - - - - \ No newline at end of file diff --git a/pr-preview/pr-11/Object/index.html b/pr-preview/pr-11/Object/index.html deleted file mode 100644 index 9f87856..0000000 --- a/pr-preview/pr-11/Object/index.html +++ /dev/null @@ -1,443 +0,0 @@ - - - - - - - - - - -Class: Object - gocam - - - - - - - - - - - - -
    -
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    - -
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    - - - -

    Class: Object

    -

    An abstract class for all identified objects in a model

    -

    URI: gocam:Object

    -
    classDiagram - class Object - click Object href "../Object" - Object <|-- TermObject - click TermObject href "../TermObject" - Object <|-- PublicationObject - click PublicationObject href "../PublicationObject" - - Object : id - - Object : label - - Object : obsolete - - Object : type - - -
    -

    Inheritance

    - -

    Slots

    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
    NameCardinality and RangeDescriptionInheritance
    id1
    Uriorcurie    		direct
    label0..1
    String    		direct
    type0..1
    Uriorcurie    		direct
    obsolete0..1
    Boolean    		direct
    -

    Usages

    - - - - - - - - - - - - - - - - - - - - - - - -
    used byused intypeused
    ModelobjectsrangeObject
    EvidenceItemwith_objectsrangeObject
    -

    Identifier and Mapping Information

    -

    Schema Source

    -
      -
    • from schema: https://w3id.org/gocam
      • -
    -

    Mappings

    - - - - - - - - - - - - - - - - - -
    Mapping TypeMapped Value
    selfgocam:Object
    nativegocam:Object
    -

    LinkML Source

    - -

    Direct

    -
    -
    name: Object
-description: An abstract class for all identified objects in a model
-from_schema: https://w3id.org/gocam
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-  obsolete:
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-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    domain_of:
-    - Object
-    range: boolean
-
-
    -
    -

    Induced

    -
    -
    name: Object
-description: An abstract class for all identified objects in a model
-from_schema: https://w3id.org/gocam
-attributes:
-  id:
-    name: id
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-    - Object
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-    - Object
-    range: string
-  type:
-    name: type
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-    designates_type: true
-    alias: type
-    owner: Object
-    domain_of:
-    - Association
-    - Object
-    range: uriorcurie
-  obsolete:
-    name: obsolete
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    alias: obsolete
-    owner: Object
-    domain_of:
-    - Object
-    range: boolean
-
-
    -
    -
    -
    - -
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    - -
    -
    -
    -
    - - - - \ No newline at end of file diff --git a/pr-preview/pr-11/Objectidentifier/index.html b/pr-preview/pr-11/Objectidentifier/index.html deleted file mode 100644 index beac85a..0000000 --- a/pr-preview/pr-11/Objectidentifier/index.html +++ /dev/null @@ -1,375 +0,0 @@ - - - - - - - - - - - - - - - - - - Type: Objectidentifier - gocam - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
    - -
    - - - - -
    - - -
    - -
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    - - - -
    -
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    - - - -
    -
    - - - - - - - - - -

    Type: Objectidentifier

    -

    A URI or CURIE that represents an object in the model.

    -

    URI: shex:iri

    -
      -
    • -

      base: ElementIdentifier

      -
      • -
    • -

      uri: shex:iri

      -
      • -
    • -

      repr: str

      -
      • -
    -

    Comments

    -
      -
    • Used for inheritance and type checking
      • -
    -

    Identifier and Mapping Information

    -

    Schema Source

    -
      -
    • from schema: https://w3id.org/gocam
      • -
    - - - - - - -
    -
    - - - - -
    - -
    - - - -
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    - - - - - - - - - - \ No newline at end of file diff --git a/pr-preview/pr-11/PhaseTermObject/index.html b/pr-preview/pr-11/PhaseTermObject/index.html deleted file mode 100644 index 5e52a56..0000000 --- a/pr-preview/pr-11/PhaseTermObject/index.html +++ /dev/null @@ -1,408 +0,0 @@ - - - - - - - - - - -Class: PhaseTermObject - gocam - - - - - - - - - - - - -
    -
    -
    - -
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    - -
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    - - - -

    Class: PhaseTermObject

    -

    A term object that represents a phase term from GO or UBERON

    -

    URI: gocam:PhaseTermObject

    -
    classDiagram - class PhaseTermObject - click PhaseTermObject href "../PhaseTermObject" - TermObject <|-- PhaseTermObject - click TermObject href "../TermObject" - - PhaseTermObject : id - - PhaseTermObject : label - - PhaseTermObject : obsolete - - PhaseTermObject : type - - -
    -

    Inheritance

    - -

    Slots

    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
    NameCardinality and RangeDescriptionInheritance
    id1
    Uriorcurie    		Object
    label0..1
    String    		Object
    type0..1
    Uriorcurie    		Object
    obsolete0..1
    Boolean    		Object
    -

    Identifier and Mapping Information

    -

    Valid ID Prefixes

    -

    Instances of this class should have identifiers with one of the following prefixes:

    -
      -
    • -

      GO

      -
      • -
    • -

      UBERON

      -
      • -
    • -

      PO

      -
      • -
    -

    Schema Source

    -
      -
    • from schema: https://w3id.org/gocam
      • -
    -

    Mappings

    - - - - - - - - - - - - - - - - - -
    Mapping TypeMapped Value
    selfgocam:PhaseTermObject
    nativegocam:PhaseTermObject
    -

    LinkML Source

    - -

    Direct

    -
    -
    name: PhaseTermObject
-id_prefixes:
-- GO
-- UBERON
-- PO
-description: A term object that represents a phase term from GO or UBERON
-from_schema: https://w3id.org/gocam
-is_a: TermObject
-
-
    -
    -

    Induced

    -
    -
    name: PhaseTermObject
-id_prefixes:
-- GO
-- UBERON
-- PO
-description: A term object that represents a phase term from GO or UBERON
-from_schema: https://w3id.org/gocam
-is_a: TermObject
-attributes:
-  id:
-    name: id
-    from_schema: https://w3id.org/gocam
-    identifier: true
-    alias: id
-    owner: PhaseTermObject
-    domain_of:
-    - Model
-    - Activity
-    - Object
-    range: uriorcurie
-    required: true
-  label:
-    name: label
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    slot_uri: rdfs:label
-    alias: label
-    owner: PhaseTermObject
-    domain_of:
-    - Object
-    range: string
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-    name: type
-    from_schema: https://w3id.org/gocam
-    designates_type: true
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-    domain_of:
-    - Association
-    - Object
-    range: uriorcurie
-  obsolete:
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-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    alias: obsolete
-    owner: PhaseTermObject
-    domain_of:
-    - Object
-    range: boolean
-
-
    -
    -
    -
    - -
    -
    - -
    -
    -
    -
    - - - - \ No newline at end of file diff --git a/pr-preview/pr-11/PredicateTermObject/index.html b/pr-preview/pr-11/PredicateTermObject/index.html deleted file mode 100644 index 86daaa3..0000000 --- a/pr-preview/pr-11/PredicateTermObject/index.html +++ /dev/null @@ -1,420 +0,0 @@ - - - - - - - - - - -Class: PredicateTermObject - gocam - - - - - - - - - - - - -
    -
    -
    - -
    -
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    - -
    -
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    - -
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    - - - -

    Class: PredicateTermObject

    -

    A term object that represents a taxon term from NCBITaxon

    -

    URI: gocam:PredicateTermObject

    -
    classDiagram - class PredicateTermObject - click PredicateTermObject href "../PredicateTermObject" - TermObject <|-- PredicateTermObject - click TermObject href "../TermObject" - - PredicateTermObject : id - - PredicateTermObject : label - - PredicateTermObject : obsolete - - PredicateTermObject : type - - -
    -

    Inheritance

    - -

    Slots

    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
    NameCardinality and RangeDescriptionInheritance
    id1
    Uriorcurie    		Object
    label0..1
    String    		Object
    type0..1
    Uriorcurie    		Object
    obsolete0..1
    Boolean    		Object
    -

    Usages

    - - - - - - - - - - - - - - - - - -
    used byused intypeused
    CausalAssociationpredicaterangePredicateTermObject
    -

    Identifier and Mapping Information

    -

    Valid ID Prefixes

    -

    Instances of this class should have identifiers with one of the following prefixes:

    -
      -
    • RO
      • -
    -

    Schema Source

    -
      -
    • from schema: https://w3id.org/gocam
      • -
    -

    Mappings

    - - - - - - - - - - - - - - - - - -
    Mapping TypeMapped Value
    selfgocam:PredicateTermObject
    nativegocam:PredicateTermObject
    -

    LinkML Source

    - -

    Direct

    -
    -
    name: PredicateTermObject
-id_prefixes:
-- RO
-description: A term object that represents a taxon term from NCBITaxon
-from_schema: https://w3id.org/gocam
-is_a: TermObject
-
-
    -
    -

    Induced

    -
    -
    name: PredicateTermObject
-id_prefixes:
-- RO
-description: A term object that represents a taxon term from NCBITaxon
-from_schema: https://w3id.org/gocam
-is_a: TermObject
-attributes:
-  id:
-    name: id
-    from_schema: https://w3id.org/gocam
-    identifier: true
-    alias: id
-    owner: PredicateTermObject
-    domain_of:
-    - Model
-    - Activity
-    - Object
-    range: uriorcurie
-    required: true
-  label:
-    name: label
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    slot_uri: rdfs:label
-    alias: label
-    owner: PredicateTermObject
-    domain_of:
-    - Object
-    range: string
-  type:
-    name: type
-    from_schema: https://w3id.org/gocam
-    designates_type: true
-    alias: type
-    owner: PredicateTermObject
-    domain_of:
-    - Association
-    - Object
-    range: uriorcurie
-  obsolete:
-    name: obsolete
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    alias: obsolete
-    owner: PredicateTermObject
-    domain_of:
-    - Object
-    range: boolean
-
-
    -
    -
    -
    - -
    -
    - -
    -
    -
    -
    - - - - \ No newline at end of file diff --git a/pr-preview/pr-11/ProteinComplexTermObject/index.html b/pr-preview/pr-11/ProteinComplexTermObject/index.html deleted file mode 100644 index e5a68de..0000000 --- a/pr-preview/pr-11/ProteinComplexTermObject/index.html +++ /dev/null @@ -1,409 +0,0 @@ - - - - - - - - - - -Class: ProteinComplexTermObject - gocam - - - - - - - - - - - - -
    -
    -
    - -
    -
    -
    -
    -
    -
    -
    - -
    -
    -
    -
    -
    -
    - -
    -
    -
    -
    -
    - - - -

    Class: ProteinComplexTermObject

    -

    A term object that represents a protein complex term from GO

    -

    URI: gocam:ProteinComplexTermObject

    -
    classDiagram - class ProteinComplexTermObject - click ProteinComplexTermObject href "../ProteinComplexTermObject" - InformationBiomacromoleculeTermObject <|-- ProteinComplexTermObject - click InformationBiomacromoleculeTermObject href "../InformationBiomacromoleculeTermObject" - - ProteinComplexTermObject : id - - ProteinComplexTermObject : label - - ProteinComplexTermObject : obsolete - - ProteinComplexTermObject : type - - -
    -

    Inheritance

    - -

    Slots

    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
    NameCardinality and RangeDescriptionInheritance
    id1
    Uriorcurie    		Object
    label0..1
    String    		Object
    type0..1
    Uriorcurie    		Object
    obsolete0..1
    Boolean    		Object
    -

    Usages

    - - - - - - - - - - - - - - - - - -
    used byused intypeused
    EnabledByProteinComplexAssociationtermrangeProteinComplexTermObject
    -

    Identifier and Mapping Information

    -

    Schema Source

    -
      -
    • from schema: https://w3id.org/gocam
      • -
    -

    Mappings

    - - - - - - - - - - - - - - - - - -
    Mapping TypeMapped Value
    selfgocam:ProteinComplexTermObject
    nativegocam:ProteinComplexTermObject
    -

    LinkML Source

    - -

    Direct

    -
    -
    name: ProteinComplexTermObject
-description: A term object that represents a protein complex term from GO
-from_schema: https://w3id.org/gocam
-is_a: InformationBiomacromoleculeTermObject
-
-
    -
    -

    Induced

    -
    -
    name: ProteinComplexTermObject
-description: A term object that represents a protein complex term from GO
-from_schema: https://w3id.org/gocam
-is_a: InformationBiomacromoleculeTermObject
-attributes:
-  id:
-    name: id
-    from_schema: https://w3id.org/gocam
-    identifier: true
-    alias: id
-    owner: ProteinComplexTermObject
-    domain_of:
-    - Model
-    - Activity
-    - Object
-    range: uriorcurie
-    required: true
-  label:
-    name: label
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    slot_uri: rdfs:label
-    alias: label
-    owner: ProteinComplexTermObject
-    domain_of:
-    - Object
-    range: string
-  type:
-    name: type
-    from_schema: https://w3id.org/gocam
-    designates_type: true
-    alias: type
-    owner: ProteinComplexTermObject
-    domain_of:
-    - Association
-    - Object
-    range: uriorcurie
-  obsolete:
-    name: obsolete
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    alias: obsolete
-    owner: ProteinComplexTermObject
-    domain_of:
-    - Object
-    range: boolean
-
-
    -
    -
    -
    - -
    -
    - -
    -
    -
    -
    - - - - \ No newline at end of file diff --git a/pr-preview/pr-11/ProvenanceInfo/index.html b/pr-preview/pr-11/ProvenanceInfo/index.html deleted file mode 100644 index fce2ac7..0000000 --- a/pr-preview/pr-11/ProvenanceInfo/index.html +++ /dev/null @@ -1,499 +0,0 @@ - - - - - - - - - - -Class: ProvenanceInfo - gocam - - - - - - - - - - - - -
    -
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    - -
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    - - - -

    Class: ProvenanceInfo

    -

    Provenance information for an object

    -

    URI: gocam:ProvenanceInfo

    -
    classDiagram - class ProvenanceInfo - click ProvenanceInfo href "../ProvenanceInfo" - ProvenanceInfo : contributor - - ProvenanceInfo : created - - ProvenanceInfo : date - - ProvenanceInfo : provided_by - - -
    - -

    Slots

    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
    NameCardinality and RangeDescriptionInheritance
    contributor0..1
    String    		direct
    created0..1
    String    		direct
    date0..1
    String    		direct
    provided_by0..1
    String    		direct
    -

    Usages

    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
    used byused intypeused
    ModelprovenancesrangeProvenanceInfo
    ActivityprovenancesrangeProvenanceInfo
    EvidenceItemprovenancesrangeProvenanceInfo
    AssociationprovenancesrangeProvenanceInfo
    EnabledByAssociationprovenancesrangeProvenanceInfo
    EnabledByGeneProductAssociationprovenancesrangeProvenanceInfo
    EnabledByProteinComplexAssociationprovenancesrangeProvenanceInfo
    CausalAssociationprovenancesrangeProvenanceInfo
    TermAssociationprovenancesrangeProvenanceInfo
    MolecularFunctionAssociationprovenancesrangeProvenanceInfo
    BiologicalProcessAssociationprovenancesrangeProvenanceInfo
    CellularAnatomicalEntityAssociationprovenancesrangeProvenanceInfo
    CellTypeAssociationprovenancesrangeProvenanceInfo
    GrossAnatomyAssociationprovenancesrangeProvenanceInfo
    MoleculeAssociationprovenancesrangeProvenanceInfo
    -

    Identifier and Mapping Information

    -

    Schema Source

    -
      -
    • from schema: https://w3id.org/gocam
      • -
    -

    Mappings

    - - - - - - - - - - - - - - - - - -
    Mapping TypeMapped Value
    selfgocam:ProvenanceInfo
    nativegocam:ProvenanceInfo
    -

    LinkML Source

    - -

    Direct

    -
    -
    name: ProvenanceInfo
-description: Provenance information for an object
-from_schema: https://w3id.org/gocam
-attributes:
-  contributor:
-    name: contributor
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    slot_uri: dct:contributor
-    domain_of:
-    - ProvenanceInfo
-  created:
-    name: created
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    slot_uri: dct:created
-    domain_of:
-    - ProvenanceInfo
-  date:
-    name: date
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    slot_uri: dct:date
-    domain_of:
-    - ProvenanceInfo
-  provided_by:
-    name: provided_by
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    slot_uri: pav:providedBy
-    domain_of:
-    - ProvenanceInfo
-
-
    -
    -

    Induced

    -
    -
    name: ProvenanceInfo
-description: Provenance information for an object
-from_schema: https://w3id.org/gocam
-attributes:
-  contributor:
-    name: contributor
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    slot_uri: dct:contributor
-    alias: contributor
-    owner: ProvenanceInfo
-    domain_of:
-    - ProvenanceInfo
-    range: string
-  created:
-    name: created
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    slot_uri: dct:created
-    alias: created
-    owner: ProvenanceInfo
-    domain_of:
-    - ProvenanceInfo
-    range: string
-  date:
-    name: date
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    slot_uri: dct:date
-    alias: date
-    owner: ProvenanceInfo
-    domain_of:
-    - ProvenanceInfo
-    range: string
-  provided_by:
-    name: provided_by
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    slot_uri: pav:providedBy
-    alias: provided_by
-    owner: ProvenanceInfo
-    domain_of:
-    - ProvenanceInfo
-    range: string
-
-
    -
    -
    -
    - -
    -
    - -
    -
    -
    -
    - - - - \ No newline at end of file diff --git a/pr-preview/pr-11/PublicationObject/index.html b/pr-preview/pr-11/PublicationObject/index.html deleted file mode 100644 index a64f63d..0000000 --- a/pr-preview/pr-11/PublicationObject/index.html +++ /dev/null @@ -1,476 +0,0 @@ - - - - - - - - - - -Class: PublicationObject - gocam - - - - - - - - - - - - -
    -
    -
    - -
    -
    -
    -
    -
    -
    -
    - -
    -
    -
    -
    -
    -
    - -
    -
    -
    -
    -
    - - - -

    Class: PublicationObject

    -

    An object that represents a publication or other kind of reference

    -

    URI: gocam:PublicationObject

    -
    classDiagram - class PublicationObject - click PublicationObject href "../PublicationObject" - Object <|-- PublicationObject - click Object href "../Object" - - PublicationObject : abstract_text - - PublicationObject : full_text - - PublicationObject : id - - PublicationObject : label - - PublicationObject : obsolete - - PublicationObject : type - - -
    -

    Inheritance

    -
      -
    • Object
        -
      • PublicationObject
        • -
      -
      • -
    -

    Slots

    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
    NameCardinality and RangeDescriptionInheritance
    abstract_text0..1
    String    		direct
    full_text0..1
    String    		direct
    id1
    Uriorcurie    		Object
    label0..1
    String    		Object
    type0..1
    Uriorcurie    		Object
    obsolete0..1
    Boolean    		Object
    -

    Usages

    - - - - - - - - - - - - - - - - - -
    used byused intypeused
    EvidenceItemreferencerangePublicationObject
    -

    Identifier and Mapping Information

    -

    Valid ID Prefixes

    -

    Instances of this class should have identifiers with one of the following prefixes:

    -
      -
    • -

      PMID

      -
      • -
    • -

      GOREF

      -
      • -
    • -

      DOI

      -
      • -
    -

    Schema Source

    -
      -
    • from schema: https://w3id.org/gocam
      • -
    -

    Mappings

    - - - - - - - - - - - - - - - - - -
    Mapping TypeMapped Value
    selfgocam:PublicationObject
    nativegocam:PublicationObject
    -

    LinkML Source

    - -

    Direct

    -
    -
    name: PublicationObject
-id_prefixes:
-- PMID
-- GOREF
-- DOI
-description: An object that represents a publication or other kind of reference
-from_schema: https://w3id.org/gocam
-is_a: Object
-attributes:
-  abstract_text:
-    name: abstract_text
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    domain_of:
-    - PublicationObject
-  full_text:
-    name: full_text
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    domain_of:
-    - PublicationObject
-
-
    -
    -

    Induced

    -
    -
    name: PublicationObject
-id_prefixes:
-- PMID
-- GOREF
-- DOI
-description: An object that represents a publication or other kind of reference
-from_schema: https://w3id.org/gocam
-is_a: Object
-attributes:
-  abstract_text:
-    name: abstract_text
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    alias: abstract_text
-    owner: PublicationObject
-    domain_of:
-    - PublicationObject
-    range: string
-  full_text:
-    name: full_text
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    alias: full_text
-    owner: PublicationObject
-    domain_of:
-    - PublicationObject
-    range: string
-  id:
-    name: id
-    from_schema: https://w3id.org/gocam
-    identifier: true
-    alias: id
-    owner: PublicationObject
-    domain_of:
-    - Model
-    - Activity
-    - Object
-    range: uriorcurie
-    required: true
-  label:
-    name: label
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    slot_uri: rdfs:label
-    alias: label
-    owner: PublicationObject
-    domain_of:
-    - Object
-    range: string
-  type:
-    name: type
-    from_schema: https://w3id.org/gocam
-    designates_type: true
-    alias: type
-    owner: PublicationObject
-    domain_of:
-    - Association
-    - Object
-    range: uriorcurie
-  obsolete:
-    name: obsolete
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    alias: obsolete
-    owner: PublicationObject
-    domain_of:
-    - Object
-    range: boolean
-
-
    -
    -
    -
    - -
    -
    - -
    -
    -
    -
    - - - - \ No newline at end of file diff --git a/pr-preview/pr-11/Sparqlpath/index.html b/pr-preview/pr-11/Sparqlpath/index.html deleted file mode 100644 index 46bac49..0000000 --- a/pr-preview/pr-11/Sparqlpath/index.html +++ /dev/null @@ -1,364 +0,0 @@ - - - - - - - - - - - - - - - - - - Type: Sparqlpath - gocam - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
    - -
    - - - - -
    - - -
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    -
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    -
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    - - - -
    -
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    - - - -
    -
    - - - - - - - - - -

    Type: Sparqlpath

    -

    A string encoding a SPARQL Property Path. The value of the string MUST conform to SPARQL syntax and SHOULD dereference to zero or more valid objects within the current instance document when encoded as RDF.

    -

    URI: xsd:string

    - -

    Identifier and Mapping Information

    -

    Schema Source

    -
      -
    • from schema: https://w3id.org/gocam
      • -
    - - - - - - -
    -
    - - - - -
    - -
    - - - -
    -
    -
    -
    - - - - - - - - - - \ No newline at end of file diff --git a/pr-preview/pr-11/String/index.html b/pr-preview/pr-11/String/index.html deleted file mode 100644 index 797c47e..0000000 --- a/pr-preview/pr-11/String/index.html +++ /dev/null @@ -1,361 +0,0 @@ - - - - - - - - - - - - - - - - - - Type: String - gocam - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
    - -
    - - - - -
    - - -
    - -
    - - - - - - -
    -
    - - - -
    -
    -
    - - - - -
    -
    -
    - - - -
    -
    -
    - - - -
    -
    -
    - - - -
    -
    - - - - - - - - - -

    Type: String

    -

    A character string

    -

    URI: xsd:string

    -
      -
    • -

      base: str

      -
      • -
    • -

      uri: xsd:string

      -
      • -
    -

    Identifier and Mapping Information

    -

    Schema Source

    -
      -
    • from schema: https://w3id.org/gocam
      • -
    - - - - - - -
    -
    - - - - -
    - -
    - - - -
    -
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    - - - - - - - - - - \ No newline at end of file diff --git a/pr-preview/pr-11/TaxonTermObject/index.html b/pr-preview/pr-11/TaxonTermObject/index.html deleted file mode 100644 index 737a821..0000000 --- a/pr-preview/pr-11/TaxonTermObject/index.html +++ /dev/null @@ -1,420 +0,0 @@ - - - - - - - - - - -Class: TaxonTermObject - gocam - - - - - - - - - - - - -
    -
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    - - - -

    Class: TaxonTermObject

    -

    A term object that represents a taxon term from NCBITaxon

    -

    URI: gocam:TaxonTermObject

    -
    classDiagram - class TaxonTermObject - click TaxonTermObject href "../TaxonTermObject" - TermObject <|-- TaxonTermObject - click TermObject href "../TermObject" - - TaxonTermObject : id - - TaxonTermObject : label - - TaxonTermObject : obsolete - - TaxonTermObject : type - - -
    -

    Inheritance

    - -

    Slots

    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
    NameCardinality and RangeDescriptionInheritance
    id1
    Uriorcurie    		Object
    label0..1
    String    		Object
    type0..1
    Uriorcurie    		Object
    obsolete0..1
    Boolean    		Object
    -

    Usages

    - - - - - - - - - - - - - - - - - -
    used byused intypeused
    ModeltaxonrangeTaxonTermObject
    -

    Identifier and Mapping Information

    -

    Valid ID Prefixes

    -

    Instances of this class should have identifiers with one of the following prefixes:

    -
      -
    • NCBITaxon
      • -
    -

    Schema Source

    -
      -
    • from schema: https://w3id.org/gocam
      • -
    -

    Mappings

    - - - - - - - - - - - - - - - - - -
    Mapping TypeMapped Value
    selfgocam:TaxonTermObject
    nativegocam:TaxonTermObject
    -

    LinkML Source

    - -

    Direct

    -
    -
    name: TaxonTermObject
-id_prefixes:
-- NCBITaxon
-description: A term object that represents a taxon term from NCBITaxon
-from_schema: https://w3id.org/gocam
-is_a: TermObject
-
-
    -
    -

    Induced

    -
    -
    name: TaxonTermObject
-id_prefixes:
-- NCBITaxon
-description: A term object that represents a taxon term from NCBITaxon
-from_schema: https://w3id.org/gocam
-is_a: TermObject
-attributes:
-  id:
-    name: id
-    from_schema: https://w3id.org/gocam
-    identifier: true
-    alias: id
-    owner: TaxonTermObject
-    domain_of:
-    - Model
-    - Activity
-    - Object
-    range: uriorcurie
-    required: true
-  label:
-    name: label
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    slot_uri: rdfs:label
-    alias: label
-    owner: TaxonTermObject
-    domain_of:
-    - Object
-    range: string
-  type:
-    name: type
-    from_schema: https://w3id.org/gocam
-    designates_type: true
-    alias: type
-    owner: TaxonTermObject
-    domain_of:
-    - Association
-    - Object
-    range: uriorcurie
-  obsolete:
-    name: obsolete
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    alias: obsolete
-    owner: TaxonTermObject
-    domain_of:
-    - Object
-    range: boolean
-
-
    -
    -
    -
    - -
    -
    - -
    -
    -
    -
    - - - - \ No newline at end of file diff --git a/pr-preview/pr-11/TermAssociation/index.html b/pr-preview/pr-11/TermAssociation/index.html deleted file mode 100644 index 100dc7a..0000000 --- a/pr-preview/pr-11/TermAssociation/index.html +++ /dev/null @@ -1,444 +0,0 @@ - - - - - - - - - - -Class: TermAssociation - gocam - - - - - - - - - - - - -
    -
    -
    - -
    -
    -
    -
    -
    -
    -
    - -
    -
    -
    -
    -
    -
    - -
    -
    -
    -
    -
    - - - -

    Class: TermAssociation

    -

    An association between an activity and a term, potentially with extensions

    -
      -
    • NOTE: this is an abstract class and should not be instantiated directly
      • -
    -

    URI: gocam:TermAssociation

    -
    classDiagram - class TermAssociation - click TermAssociation href "../TermAssociation" - Association <|-- TermAssociation - click Association href "../Association" - - - TermAssociation <|-- MolecularFunctionAssociation - click MolecularFunctionAssociation href "../MolecularFunctionAssociation" - TermAssociation <|-- BiologicalProcessAssociation - click BiologicalProcessAssociation href "../BiologicalProcessAssociation" - TermAssociation <|-- CellularAnatomicalEntityAssociation - click CellularAnatomicalEntityAssociation href "../CellularAnatomicalEntityAssociation" - TermAssociation <|-- CellTypeAssociation - click CellTypeAssociation href "../CellTypeAssociation" - TermAssociation <|-- GrossAnatomyAssociation - click GrossAnatomyAssociation href "../GrossAnatomyAssociation" - TermAssociation <|-- MoleculeAssociation - click MoleculeAssociation href "../MoleculeAssociation" - - - TermAssociation : evidence - - - - - TermAssociation --> "*" EvidenceItem : evidence - click EvidenceItem href "../EvidenceItem" - - - TermAssociation : provenances - - - - - TermAssociation --> "*" ProvenanceInfo : provenances - click ProvenanceInfo href "../ProvenanceInfo" - - - TermAssociation : term - - - - - TermAssociation --> "0..1" TermObject : term - click TermObject href "../TermObject" - - - TermAssociation : type - - -
    -

    Inheritance

    - -

    Slots

    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
    NameCardinality and RangeDescriptionInheritance
    term0..1
    TermObject    		The ontology term that describes the nature of the associationdirect
    type0..1
    String    		Association
    evidence*
    EvidenceItem    		Association
    provenances*
    ProvenanceInfo    		Association
    -

    Identifier and Mapping Information

    -

    Schema Source

    -
      -
    • from schema: https://w3id.org/gocam
      • -
    -

    Mappings

    - - - - - - - - - - - - - - - - - -
    Mapping TypeMapped Value
    selfgocam:TermAssociation
    nativegocam:TermAssociation
    -

    LinkML Source

    - -

    Direct

    -
    -
    name: TermAssociation
-description: An association between an activity and a term, potentially with extensions
-from_schema: https://w3id.org/gocam
-is_a: Association
-abstract: true
-attributes:
-  term:
-    name: term
-    description: The ontology term that describes the nature of the association
-    from_schema: https://w3id.org/gocam
-    domain_of:
-    - EvidenceItem
-    - EnabledByAssociation
-    - TermAssociation
-    range: TermObject
-
-
    -
    -

    Induced

    -
    -
    name: TermAssociation
-description: An association between an activity and a term, potentially with extensions
-from_schema: https://w3id.org/gocam
-is_a: Association
-abstract: true
-attributes:
-  term:
-    name: term
-    description: The ontology term that describes the nature of the association
-    from_schema: https://w3id.org/gocam
-    alias: term
-    owner: TermAssociation
-    domain_of:
-    - EvidenceItem
-    - EnabledByAssociation
-    - TermAssociation
-    range: TermObject
-  type:
-    name: type
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    designates_type: true
-    alias: type
-    owner: TermAssociation
-    domain_of:
-    - Association
-    - Object
-    range: string
-  evidence:
-    name: evidence
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    multivalued: true
-    alias: evidence
-    owner: TermAssociation
-    domain_of:
-    - Association
-    range: EvidenceItem
-    inlined: true
-  provenances:
-    name: provenances
-    from_schema: https://w3id.org/gocam
-    multivalued: true
-    alias: provenances
-    owner: TermAssociation
-    domain_of:
-    - Model
-    - Activity
-    - EvidenceItem
-    - Association
-    range: ProvenanceInfo
-    inlined: true
-    inlined_as_list: true
-
-
    -
    -
    -
    - -
    -
    - -
    -
    -
    -
    - - - - \ No newline at end of file diff --git a/pr-preview/pr-11/TermObject/index.html b/pr-preview/pr-11/TermObject/index.html deleted file mode 100644 index 78b07bf..0000000 --- a/pr-preview/pr-11/TermObject/index.html +++ /dev/null @@ -1,446 +0,0 @@ - - - - - - - - - - -Class: TermObject - gocam - - - - - - - - - - - - -
    -
    -
    - -
    -
    -
    -
    -
    -
    -
    - -
    -
    -
    -
    -
    -
    - -
    -
    -
    -
    -
    - - - -

    Class: TermObject

    -

    An abstract class for all ontology term objects

    -
      -
    • NOTE: this is an abstract class and should not be instantiated directly
      • -
    -

    URI: gocam:TermObject

    -
    classDiagram - class TermObject - click TermObject href "../TermObject" - Object <|-- TermObject - click Object href "../Object" - - - TermObject <|-- EvidenceTermObject - click EvidenceTermObject href "../EvidenceTermObject" - TermObject <|-- MolecularFunctionTermObject - click MolecularFunctionTermObject href "../MolecularFunctionTermObject" - TermObject <|-- BiologicalProcessTermObject - click BiologicalProcessTermObject href "../BiologicalProcessTermObject" - TermObject <|-- CellularAnatomicalEntityTermObject - click CellularAnatomicalEntityTermObject href "../CellularAnatomicalEntityTermObject" - TermObject <|-- MoleculeTermObject - click MoleculeTermObject href "../MoleculeTermObject" - TermObject <|-- CellTypeTermObject - click CellTypeTermObject href "../CellTypeTermObject" - TermObject <|-- GrossAnatomicalStructureTermObject - click GrossAnatomicalStructureTermObject href "../GrossAnatomicalStructureTermObject" - TermObject <|-- PhaseTermObject - click PhaseTermObject href "../PhaseTermObject" - TermObject <|-- InformationBiomacromoleculeTermObject - click InformationBiomacromoleculeTermObject href "../InformationBiomacromoleculeTermObject" - TermObject <|-- TaxonTermObject - click TaxonTermObject href "../TaxonTermObject" - TermObject <|-- PredicateTermObject - click PredicateTermObject href "../PredicateTermObject" - - - TermObject : id - - TermObject : label - - TermObject : obsolete - - TermObject : type - - -
    -

    Inheritance

    - -

    Slots

    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
    NameCardinality and RangeDescriptionInheritance
    id1
    Uriorcurie    		Object
    label0..1
    String    		Object
    type0..1
    Uriorcurie    		Object
    obsolete0..1
    Boolean    		Object
    -

    Usages

    - - - - - - - - - - - - - - - - - -
    used byused intypeused
    TermAssociationtermrangeTermObject
    -

    Identifier and Mapping Information

    -

    Schema Source

    -
      -
    • from schema: https://w3id.org/gocam
      • -
    -

    Mappings

    - - - - - - - - - - - - - - - - - -
    Mapping TypeMapped Value
    selfgocam:TermObject
    nativegocam:TermObject
    -

    LinkML Source

    - -

    Direct

    -
    -
    name: TermObject
-description: An abstract class for all ontology term objects
-from_schema: https://w3id.org/gocam
-is_a: Object
-abstract: true
-
-
    -
    -

    Induced

    -
    -
    name: TermObject
-description: An abstract class for all ontology term objects
-from_schema: https://w3id.org/gocam
-is_a: Object
-abstract: true
-attributes:
-  id:
-    name: id
-    from_schema: https://w3id.org/gocam
-    identifier: true
-    alias: id
-    owner: TermObject
-    domain_of:
-    - Model
-    - Activity
-    - Object
-    range: uriorcurie
-    required: true
-  label:
-    name: label
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    slot_uri: rdfs:label
-    alias: label
-    owner: TermObject
-    domain_of:
-    - Object
-    range: string
-  type:
-    name: type
-    from_schema: https://w3id.org/gocam
-    designates_type: true
-    alias: type
-    owner: TermObject
-    domain_of:
-    - Association
-    - Object
-    range: uriorcurie
-  obsolete:
-    name: obsolete
-    from_schema: https://w3id.org/gocam
-    rank: 1000
-    alias: obsolete
-    owner: TermObject
-    domain_of:
-    - Object
-    range: boolean
-
-
    -
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    - - - - \ No newline at end of file diff --git a/pr-preview/pr-11/Time/index.html b/pr-preview/pr-11/Time/index.html deleted file mode 100644 index 67abd7b..0000000 --- a/pr-preview/pr-11/Time/index.html +++ /dev/null @@ -1,364 +0,0 @@ - - - - - - - - - - - - - - - - - - Type: Time - gocam - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
    - -
    - - - - -
    - - -
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    - - - -
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    - - - -
    -
    - - - - - - - - - -

    Type: Time

    -

    A time object represents a (local) time of day, independent of any particular day

    -

    URI: xsd:time

    -
      -
    • -

      base: XSDTime

      -
      • -
    • -

      uri: xsd:time

      -
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P(()=>Y([ve(e),Es(t)])).pipe(m(([{height:r},n])=>({height:r,hidden:n})),B((r,n)=>r.height===n.height&&r.hidden===n.hidden),X(1))}function vi(e,{header$:t,main$:r}){return P(()=>{let n=new E,o=n.pipe(de(1));return n.pipe(J("active"),Ze(t)).subscribe(([{active:i},{hidden:s}])=>{e.classList.toggle("md-header--shadow",i&&!s),e.hidden=s}),r.subscribe(n),t.pipe(ee(o),m(i=>H({ref:e},i)))})}function Ss(e,{viewport$:t,header$:r}){return dr(e,{viewport$:t,header$:r}).pipe(m(({offset:{y:n}})=>{let{height:o}=he(e);return{active:n>=o}}),J("active"))}function gi(e,t){return P(()=>{let r=new E;r.subscribe(({active:o})=>{e.classList.toggle("md-header__title--active",o)});let n=pe("article h1");return typeof n=="undefined"?R:Ss(n,t).pipe(w(o=>r.next(o)),C(()=>r.complete()),m(o=>H({ref:e},o)))})}function yi(e,{viewport$:t,header$:r}){let n=r.pipe(m(({height:i})=>i),B()),o=n.pipe(S(()=>ve(e).pipe(m(({height:i})=>({top:e.offsetTop,bottom:e.offsetTop+i})),J("bottom"))));return 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n.pipe(ae(r),Mt(a)).subscribe(([{items:f},{value:u}])=>{if(u)switch(f.length){case 0:i.textContent=re("search.result.none");break;case 1:i.textContent=re("search.result.one");break;default:i.textContent=re("search.result.other",lr(f.length))}else i.textContent=re("search.result.placeholder")}),n.pipe(w(()=>s.innerHTML=""),S(({items:f})=>A(I(...f.slice(0,10)),I(...f.slice(10)).pipe(Ce(4),Nr(o),S(([u])=>u))))).subscribe(f=>s.appendChild(Jo(f))),t.pipe(x(vt),m(({data:f})=>f)).pipe(w(f=>n.next(f)),C(()=>n.complete()),m(f=>H({ref:e},f)))}function Hs(e,{query$:t}){return t.pipe(m(({value:r})=>{let n=Oe();return n.hash="",n.searchParams.delete("h"),n.searchParams.set("q",r),{url:n}}))}function Ri(e,t){let r=new E;return r.subscribe(({url:n})=>{e.setAttribute("data-clipboard-text",e.href),e.href=`${n}`}),v(e,"click").subscribe(n=>n.preventDefault()),Hs(e,t).pipe(w(n=>r.next(n)),C(()=>r.complete()),m(n=>H({ref:e},n)))}function ki(e,{rx$:t},{keyboard$:r}){let n=new E,o=_e("search-query"),i=A(v(o,"keydown"),v(o,"focus")).pipe(Le(fe),m(()=>o.value),B());return n.pipe(Ze(i),m(([{suggestions:a},c])=>{let f=c.split(/([\s-]+)/);if((a==null?void 0:a.length)&&f[f.length-1]){let u=a[a.length-1];u.startsWith(f[f.length-1])&&(f[f.length-1]=u)}else f.length=0;return f})).subscribe(a=>e.innerHTML=a.join("").replace(/\s/g," ")),r.pipe(x(({mode:a})=>a==="search")).subscribe(a=>{switch(a.type){case"ArrowRight":e.innerText.length&&o.selectionStart===o.value.length&&(o.value=e.innerText);break}}),t.pipe(x(vt),m(({data:a})=>a)).pipe(w(a=>n.next(a)),C(()=>n.complete()),m(()=>({ref:e})))}function Hi(e,{index$:t,keyboard$:r}){let n=le();try{let o=(__search==null?void 0:__search.worker)||n.search,i=Mi(o,t),s=_e("search-query",e),a=_e("search-result",e),{tx$:c,rx$:f}=i;c.pipe(x(Ti),ut(f.pipe(x(bt))),oe(1)).subscribe(c.next.bind(c)),r.pipe(x(({mode:l})=>l==="search")).subscribe(l=>{let d=Ie();switch(l.type){case"Enter":if(d===s){let h=new Map;for(let b of Q(":first-child 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"src/assets/javascripts/polyfills/index.ts"], - "sourceRoot": "../../../..", - "sourcesContent": ["(function (global, factory) {\n typeof exports === 'object' && typeof module !== 'undefined' ? factory() :\n typeof define === 'function' && define.amd ? define(factory) :\n (factory());\n}(this, (function () { 'use strict';\n\n /**\n * Applies the :focus-visible polyfill at the given scope.\n * A scope in this case is either the top-level Document or a Shadow Root.\n *\n * @param {(Document|ShadowRoot)} scope\n * @see https://github.com/WICG/focus-visible\n */\n function applyFocusVisiblePolyfill(scope) {\n var hadKeyboardEvent = true;\n var hadFocusVisibleRecently = false;\n var hadFocusVisibleRecentlyTimeout = null;\n\n var inputTypesAllowlist = {\n text: true,\n search: true,\n url: true,\n tel: true,\n email: true,\n password: true,\n number: true,\n date: true,\n month: true,\n week: true,\n time: true,\n datetime: true,\n 'datetime-local': true\n };\n\n /**\n * Helper function for legacy browsers and iframes which sometimes focus\n * elements like document, body, and non-interactive SVG.\n * @param {Element} el\n */\n function isValidFocusTarget(el) {\n if (\n el &&\n el !== document &&\n el.nodeName !== 'HTML' &&\n el.nodeName !== 'BODY' &&\n 'classList' in el &&\n 'contains' in el.classList\n ) {\n return true;\n }\n return false;\n }\n\n /**\n * Computes whether the given element should automatically trigger the\n * `focus-visible` class being added, i.e. whether it should always match\n * `:focus-visible` when focused.\n * @param {Element} el\n * @return {boolean}\n */\n function focusTriggersKeyboardModality(el) {\n var type = el.type;\n var tagName = el.tagName;\n\n if (tagName === 'INPUT' && inputTypesAllowlist[type] && !el.readOnly) {\n return true;\n }\n\n if (tagName === 'TEXTAREA' && !el.readOnly) {\n return true;\n }\n\n if (el.isContentEditable) {\n return true;\n }\n\n return false;\n }\n\n /**\n * Add the `focus-visible` class to the given element if it was not added by\n * the author.\n * @param {Element} el\n */\n function addFocusVisibleClass(el) {\n if (el.classList.contains('focus-visible')) {\n return;\n }\n el.classList.add('focus-visible');\n el.setAttribute('data-focus-visible-added', '');\n }\n\n /**\n * Remove the `focus-visible` class from the given element if it was not\n * originally added by the author.\n * @param {Element} el\n */\n function removeFocusVisibleClass(el) {\n if (!el.hasAttribute('data-focus-visible-added')) {\n return;\n }\n el.classList.remove('focus-visible');\n el.removeAttribute('data-focus-visible-added');\n }\n\n /**\n * If the most recent user interaction was via the keyboard;\n * and the key press did not include a meta, alt/option, or control key;\n * then the modality is keyboard. Otherwise, the modality is not keyboard.\n * Apply `focus-visible` to any current active element and keep track\n * of our keyboard modality state with `hadKeyboardEvent`.\n * @param {KeyboardEvent} e\n */\n function onKeyDown(e) {\n if (e.metaKey || e.altKey || e.ctrlKey) {\n return;\n }\n\n if (isValidFocusTarget(scope.activeElement)) {\n addFocusVisibleClass(scope.activeElement);\n }\n\n hadKeyboardEvent = true;\n }\n\n /**\n * If at any point a user clicks with a pointing device, ensure that we change\n * the modality away from keyboard.\n * This avoids the situation where a user presses a key on an already focused\n * element, and then clicks on a different element, focusing it with a\n * pointing device, while we still think we're in keyboard modality.\n * @param {Event} e\n */\n function onPointerDown(e) {\n hadKeyboardEvent = false;\n }\n\n /**\n * On `focus`, add the `focus-visible` class to the target if:\n * - the target received focus as a result of keyboard navigation, or\n * - the event target is an element that will likely require interaction\n * via the keyboard (e.g. a text box)\n * @param {Event} e\n */\n function onFocus(e) {\n // Prevent IE from focusing the document or HTML element.\n if (!isValidFocusTarget(e.target)) {\n return;\n }\n\n if (hadKeyboardEvent || focusTriggersKeyboardModality(e.target)) {\n addFocusVisibleClass(e.target);\n }\n }\n\n /**\n * On `blur`, remove the `focus-visible` class from the target.\n * @param {Event} e\n */\n function onBlur(e) {\n if (!isValidFocusTarget(e.target)) {\n return;\n }\n\n if (\n e.target.classList.contains('focus-visible') ||\n e.target.hasAttribute('data-focus-visible-added')\n ) {\n // To detect a tab/window switch, we look for a blur event followed\n // rapidly by a visibility change.\n // If we don't see a visibility change within 100ms, it's probably a\n // regular focus change.\n hadFocusVisibleRecently = true;\n window.clearTimeout(hadFocusVisibleRecentlyTimeout);\n hadFocusVisibleRecentlyTimeout = window.setTimeout(function() {\n hadFocusVisibleRecently = false;\n }, 100);\n removeFocusVisibleClass(e.target);\n }\n }\n\n /**\n * If the user changes tabs, keep track of whether or not the previously\n * focused element had .focus-visible.\n * @param {Event} e\n */\n function onVisibilityChange(e) {\n if (document.visibilityState === 'hidden') {\n // If the tab becomes active again, the browser will handle calling focus\n // on the element (Safari actually calls it twice).\n // If this tab change caused a blur on an element with focus-visible,\n // re-apply the class when the user switches back to the tab.\n if (hadFocusVisibleRecently) {\n hadKeyboardEvent = true;\n }\n addInitialPointerMoveListeners();\n }\n }\n\n /**\n * Add a group of listeners to detect usage of any pointing devices.\n * These listeners will be added when the polyfill first loads, and anytime\n * the window is blurred, so that they are active when the window regains\n * focus.\n */\n function addInitialPointerMoveListeners() {\n document.addEventListener('mousemove', onInitialPointerMove);\n document.addEventListener('mousedown', onInitialPointerMove);\n document.addEventListener('mouseup', onInitialPointerMove);\n document.addEventListener('pointermove', onInitialPointerMove);\n document.addEventListener('pointerdown', onInitialPointerMove);\n document.addEventListener('pointerup', onInitialPointerMove);\n document.addEventListener('touchmove', onInitialPointerMove);\n document.addEventListener('touchstart', onInitialPointerMove);\n document.addEventListener('touchend', onInitialPointerMove);\n }\n\n function removeInitialPointerMoveListeners() {\n document.removeEventListener('mousemove', onInitialPointerMove);\n document.removeEventListener('mousedown', onInitialPointerMove);\n document.removeEventListener('mouseup', onInitialPointerMove);\n document.removeEventListener('pointermove', onInitialPointerMove);\n document.removeEventListener('pointerdown', onInitialPointerMove);\n document.removeEventListener('pointerup', onInitialPointerMove);\n document.removeEventListener('touchmove', onInitialPointerMove);\n document.removeEventListener('touchstart', onInitialPointerMove);\n document.removeEventListener('touchend', onInitialPointerMove);\n }\n\n /**\n * When the polfyill first loads, assume the user is in keyboard modality.\n * If any event is received from a pointing device (e.g. mouse, pointer,\n * touch), turn off keyboard modality.\n * This accounts for situations where focus enters the page from the URL bar.\n * @param {Event} e\n */\n function onInitialPointerMove(e) {\n // Work around a Safari quirk that fires a mousemove on whenever the\n // window blurs, even if you're tabbing out of the page. \u00AF\\_(\u30C4)_/\u00AF\n if (e.target.nodeName && e.target.nodeName.toLowerCase() === 'html') {\n return;\n }\n\n hadKeyboardEvent = false;\n removeInitialPointerMoveListeners();\n }\n\n // For some kinds of state, we are interested in changes at the global scope\n // only. For example, global pointer input, global key presses and global\n // visibility change should affect the state at every scope:\n document.addEventListener('keydown', onKeyDown, true);\n document.addEventListener('mousedown', onPointerDown, true);\n document.addEventListener('pointerdown', onPointerDown, true);\n document.addEventListener('touchstart', onPointerDown, true);\n document.addEventListener('visibilitychange', onVisibilityChange, true);\n\n addInitialPointerMoveListeners();\n\n // For focus and blur, we specifically care about state changes in the local\n // scope. This is because focus / blur events that originate from within a\n // shadow root are not re-dispatched from the host element if it was already\n // the active element in its own scope:\n scope.addEventListener('focus', onFocus, true);\n scope.addEventListener('blur', onBlur, true);\n\n // We detect that a node is a ShadowRoot by ensuring that it is a\n // DocumentFragment and also has a host property. This check covers native\n // implementation and polyfill implementation transparently. If we only cared\n // about the native implementation, we could just check if the scope was\n // an instance of a ShadowRoot.\n if (scope.nodeType === Node.DOCUMENT_FRAGMENT_NODE && scope.host) {\n // Since a ShadowRoot is a special kind of DocumentFragment, it does not\n // have a root element to add a class to. So, we add this attribute to the\n // host element instead:\n scope.host.setAttribute('data-js-focus-visible', '');\n } else if (scope.nodeType === Node.DOCUMENT_NODE) {\n document.documentElement.classList.add('js-focus-visible');\n document.documentElement.setAttribute('data-js-focus-visible', '');\n }\n }\n\n // It is important to wrap all references to global window and document in\n // these checks to support server-side rendering use cases\n // @see https://github.com/WICG/focus-visible/issues/199\n if (typeof window !== 'undefined' && typeof document !== 'undefined') {\n // Make the polyfill helper globally available. This can be used as a signal\n // to interested libraries that wish to coordinate with the polyfill for e.g.,\n // applying the polyfill to a shadow root:\n window.applyFocusVisiblePolyfill = applyFocusVisiblePolyfill;\n\n // Notify interested libraries of the polyfill's presence, in case the\n // polyfill was loaded lazily:\n var event;\n\n try {\n event = new CustomEvent('focus-visible-polyfill-ready');\n } catch (error) {\n // IE11 does not support using CustomEvent as a constructor directly:\n event = document.createEvent('CustomEvent');\n event.initCustomEvent('focus-visible-polyfill-ready', false, false, {});\n }\n\n window.dispatchEvent(event);\n }\n\n if (typeof document !== 'undefined') {\n // Apply the polyfill to the global document, so that no JavaScript\n // coordination is required to use the polyfill in the top-level document:\n applyFocusVisiblePolyfill(document);\n }\n\n})));\n", "(function(global) {\r\n /**\r\n * Polyfill URLSearchParams\r\n *\r\n * Inspired from : https://github.com/WebReflection/url-search-params/blob/master/src/url-search-params.js\r\n */\r\n\r\n var checkIfIteratorIsSupported = function() {\r\n try {\r\n return !!Symbol.iterator;\r\n } catch (error) {\r\n return false;\r\n }\r\n };\r\n\r\n\r\n var iteratorSupported = checkIfIteratorIsSupported();\r\n\r\n var createIterator = function(items) {\r\n var iterator = {\r\n next: function() {\r\n var value = items.shift();\r\n return { done: value === void 0, value: value };\r\n }\r\n };\r\n\r\n if (iteratorSupported) {\r\n iterator[Symbol.iterator] = function() {\r\n return iterator;\r\n };\r\n }\r\n\r\n return iterator;\r\n };\r\n\r\n /**\r\n * Search param name and values should be encoded according to https://url.spec.whatwg.org/#urlencoded-serializing\r\n * encodeURIComponent() produces the same result except encoding spaces as `%20` instead of `+`.\r\n */\r\n var serializeParam = function(value) {\r\n return encodeURIComponent(value).replace(/%20/g, '+');\r\n };\r\n\r\n var deserializeParam = function(value) {\r\n return decodeURIComponent(String(value).replace(/\\+/g, ' '));\r\n };\r\n\r\n var polyfillURLSearchParams = function() {\r\n\r\n var URLSearchParams = function(searchString) {\r\n Object.defineProperty(this, '_entries', { writable: true, value: {} });\r\n var typeofSearchString = typeof searchString;\r\n\r\n if (typeofSearchString === 'undefined') {\r\n // do nothing\r\n } else if (typeofSearchString === 'string') {\r\n if (searchString !== '') {\r\n this._fromString(searchString);\r\n }\r\n } else if (searchString instanceof URLSearchParams) {\r\n var _this = this;\r\n searchString.forEach(function(value, name) {\r\n _this.append(name, value);\r\n });\r\n } else if ((searchString !== null) && (typeofSearchString === 'object')) {\r\n if (Object.prototype.toString.call(searchString) === '[object Array]') {\r\n for (var i = 0; i < searchString.length; i++) {\r\n var entry = searchString[i];\r\n if ((Object.prototype.toString.call(entry) === '[object Array]') || (entry.length !== 2)) {\r\n this.append(entry[0], entry[1]);\r\n } else {\r\n throw new TypeError('Expected [string, any] as entry at index ' + i + ' of URLSearchParams\\'s input');\r\n }\r\n }\r\n } else {\r\n for (var key in searchString) {\r\n if (searchString.hasOwnProperty(key)) {\r\n this.append(key, searchString[key]);\r\n }\r\n }\r\n }\r\n } else {\r\n throw new TypeError('Unsupported input\\'s type for URLSearchParams');\r\n }\r\n };\r\n\r\n var proto = URLSearchParams.prototype;\r\n\r\n proto.append = function(name, value) {\r\n if (name in this._entries) {\r\n this._entries[name].push(String(value));\r\n } else {\r\n this._entries[name] = [String(value)];\r\n }\r\n };\r\n\r\n proto.delete = function(name) {\r\n delete this._entries[name];\r\n };\r\n\r\n proto.get = function(name) {\r\n return (name in this._entries) ? this._entries[name][0] : null;\r\n };\r\n\r\n proto.getAll = function(name) {\r\n return (name in this._entries) ? this._entries[name].slice(0) : [];\r\n };\r\n\r\n proto.has = function(name) {\r\n return (name in this._entries);\r\n };\r\n\r\n proto.set = function(name, value) {\r\n this._entries[name] = [String(value)];\r\n };\r\n\r\n proto.forEach = function(callback, thisArg) {\r\n var entries;\r\n for (var name in this._entries) {\r\n if (this._entries.hasOwnProperty(name)) {\r\n entries = this._entries[name];\r\n for (var i = 0; i < entries.length; i++) {\r\n callback.call(thisArg, entries[i], name, this);\r\n }\r\n }\r\n }\r\n };\r\n\r\n proto.keys = function() {\r\n var items = [];\r\n this.forEach(function(value, name) {\r\n items.push(name);\r\n });\r\n return createIterator(items);\r\n };\r\n\r\n proto.values = function() {\r\n var items = [];\r\n this.forEach(function(value) {\r\n items.push(value);\r\n });\r\n return createIterator(items);\r\n };\r\n\r\n proto.entries = function() {\r\n var items = [];\r\n this.forEach(function(value, name) {\r\n items.push([name, value]);\r\n });\r\n return createIterator(items);\r\n };\r\n\r\n if (iteratorSupported) {\r\n proto[Symbol.iterator] = proto.entries;\r\n }\r\n\r\n proto.toString = function() {\r\n var searchArray = [];\r\n this.forEach(function(value, name) {\r\n searchArray.push(serializeParam(name) + '=' + serializeParam(value));\r\n });\r\n return searchArray.join('&');\r\n };\r\n\r\n\r\n global.URLSearchParams = URLSearchParams;\r\n };\r\n\r\n var checkIfURLSearchParamsSupported = function() {\r\n try {\r\n var URLSearchParams = global.URLSearchParams;\r\n\r\n return (\r\n (new URLSearchParams('?a=1').toString() === 'a=1') &&\r\n (typeof URLSearchParams.prototype.set === 'function') &&\r\n (typeof URLSearchParams.prototype.entries === 'function')\r\n );\r\n } catch (e) {\r\n return false;\r\n }\r\n };\r\n\r\n if (!checkIfURLSearchParamsSupported()) {\r\n polyfillURLSearchParams();\r\n }\r\n\r\n var proto = global.URLSearchParams.prototype;\r\n\r\n if (typeof proto.sort !== 'function') {\r\n proto.sort = function() {\r\n var _this = this;\r\n var items = [];\r\n this.forEach(function(value, name) {\r\n items.push([name, value]);\r\n if (!_this._entries) {\r\n _this.delete(name);\r\n }\r\n });\r\n items.sort(function(a, b) {\r\n if (a[0] < b[0]) {\r\n return -1;\r\n } else if (a[0] > b[0]) {\r\n return +1;\r\n } else {\r\n return 0;\r\n }\r\n });\r\n if (_this._entries) { // force reset because IE keeps keys index\r\n _this._entries = {};\r\n }\r\n for (var i = 0; i < items.length; i++) {\r\n this.append(items[i][0], items[i][1]);\r\n }\r\n };\r\n }\r\n\r\n if (typeof proto._fromString !== 'function') {\r\n Object.defineProperty(proto, '_fromString', {\r\n enumerable: false,\r\n configurable: false,\r\n writable: false,\r\n value: function(searchString) {\r\n if (this._entries) {\r\n this._entries = {};\r\n } else {\r\n var keys = [];\r\n this.forEach(function(value, name) {\r\n keys.push(name);\r\n });\r\n for (var i = 0; i < keys.length; i++) {\r\n this.delete(keys[i]);\r\n }\r\n }\r\n\r\n searchString = searchString.replace(/^\\?/, '');\r\n var attributes = searchString.split('&');\r\n var attribute;\r\n for (var i = 0; i < attributes.length; i++) {\r\n attribute = attributes[i].split('=');\r\n this.append(\r\n deserializeParam(attribute[0]),\r\n (attribute.length > 1) ? deserializeParam(attribute[1]) : ''\r\n );\r\n }\r\n }\r\n });\r\n }\r\n\r\n // HTMLAnchorElement\r\n\r\n})(\r\n (typeof global !== 'undefined') ? global\r\n : ((typeof window !== 'undefined') ? window\r\n : ((typeof self !== 'undefined') ? self : this))\r\n);\r\n\r\n(function(global) {\r\n /**\r\n * Polyfill URL\r\n *\r\n * Inspired from : https://github.com/arv/DOM-URL-Polyfill/blob/master/src/url.js\r\n */\r\n\r\n var checkIfURLIsSupported = function() {\r\n try {\r\n var u = new global.URL('b', 'http://a');\r\n u.pathname = 'c d';\r\n return (u.href === 'http://a/c%20d') && u.searchParams;\r\n } catch (e) {\r\n return false;\r\n }\r\n };\r\n\r\n\r\n var polyfillURL = function() {\r\n var _URL = global.URL;\r\n\r\n var URL = function(url, base) {\r\n if (typeof url !== 'string') url = String(url);\r\n if (base && typeof base !== 'string') base = String(base);\r\n\r\n // Only create another document if the base is different from current location.\r\n var doc = document, baseElement;\r\n if (base && (global.location === void 0 || base !== global.location.href)) {\r\n base = base.toLowerCase();\r\n doc = document.implementation.createHTMLDocument('');\r\n baseElement = doc.createElement('base');\r\n baseElement.href = base;\r\n doc.head.appendChild(baseElement);\r\n try {\r\n if (baseElement.href.indexOf(base) !== 0) throw new Error(baseElement.href);\r\n } catch (err) {\r\n throw new Error('URL unable to set base ' + base + ' due to ' + err);\r\n }\r\n }\r\n\r\n var anchorElement = doc.createElement('a');\r\n anchorElement.href = url;\r\n if (baseElement) {\r\n doc.body.appendChild(anchorElement);\r\n anchorElement.href = anchorElement.href; // force href to refresh\r\n }\r\n\r\n var inputElement = doc.createElement('input');\r\n inputElement.type = 'url';\r\n inputElement.value = url;\r\n\r\n if (anchorElement.protocol === ':' || !/:/.test(anchorElement.href) || (!inputElement.checkValidity() && !base)) {\r\n throw new TypeError('Invalid URL');\r\n }\r\n\r\n Object.defineProperty(this, '_anchorElement', {\r\n value: anchorElement\r\n });\r\n\r\n\r\n // create a linked searchParams which reflect its changes on URL\r\n var searchParams = new global.URLSearchParams(this.search);\r\n var enableSearchUpdate = true;\r\n var enableSearchParamsUpdate = true;\r\n var _this = this;\r\n ['append', 'delete', 'set'].forEach(function(methodName) {\r\n var method = searchParams[methodName];\r\n searchParams[methodName] = function() {\r\n method.apply(searchParams, arguments);\r\n if (enableSearchUpdate) {\r\n enableSearchParamsUpdate = false;\r\n _this.search = searchParams.toString();\r\n enableSearchParamsUpdate = true;\r\n }\r\n };\r\n });\r\n\r\n Object.defineProperty(this, 'searchParams', {\r\n value: searchParams,\r\n enumerable: true\r\n });\r\n\r\n var search = void 0;\r\n Object.defineProperty(this, '_updateSearchParams', {\r\n enumerable: false,\r\n configurable: false,\r\n writable: false,\r\n value: function() {\r\n if (this.search !== search) {\r\n search = this.search;\r\n if (enableSearchParamsUpdate) {\r\n enableSearchUpdate = false;\r\n this.searchParams._fromString(this.search);\r\n enableSearchUpdate = true;\r\n }\r\n }\r\n }\r\n });\r\n };\r\n\r\n var proto = URL.prototype;\r\n\r\n var linkURLWithAnchorAttribute = function(attributeName) {\r\n Object.defineProperty(proto, attributeName, {\r\n get: function() {\r\n return this._anchorElement[attributeName];\r\n },\r\n set: function(value) {\r\n this._anchorElement[attributeName] = value;\r\n },\r\n enumerable: true\r\n });\r\n };\r\n\r\n ['hash', 'host', 'hostname', 'port', 'protocol']\r\n .forEach(function(attributeName) {\r\n linkURLWithAnchorAttribute(attributeName);\r\n });\r\n\r\n Object.defineProperty(proto, 'search', {\r\n get: function() {\r\n return this._anchorElement['search'];\r\n },\r\n set: function(value) {\r\n this._anchorElement['search'] = value;\r\n this._updateSearchParams();\r\n },\r\n enumerable: true\r\n });\r\n\r\n Object.defineProperties(proto, {\r\n\r\n 'toString': {\r\n get: function() {\r\n var _this = this;\r\n return function() {\r\n return _this.href;\r\n };\r\n }\r\n },\r\n\r\n 'href': {\r\n get: function() {\r\n return this._anchorElement.href.replace(/\\?$/, '');\r\n },\r\n set: function(value) {\r\n this._anchorElement.href = value;\r\n this._updateSearchParams();\r\n },\r\n enumerable: true\r\n },\r\n\r\n 'pathname': {\r\n get: function() {\r\n return this._anchorElement.pathname.replace(/(^\\/?)/, '/');\r\n },\r\n set: function(value) {\r\n this._anchorElement.pathname = value;\r\n },\r\n enumerable: true\r\n },\r\n\r\n 'origin': {\r\n get: function() {\r\n // get expected port from protocol\r\n var expectedPort = { 'http:': 80, 'https:': 443, 'ftp:': 21 }[this._anchorElement.protocol];\r\n // add port to origin if, expected port is different than actual port\r\n // and it is not empty f.e http://foo:8080\r\n // 8080 != 80 && 8080 != ''\r\n var addPortToOrigin = this._anchorElement.port != expectedPort &&\r\n this._anchorElement.port !== '';\r\n\r\n return this._anchorElement.protocol +\r\n '//' +\r\n this._anchorElement.hostname +\r\n (addPortToOrigin ? (':' + this._anchorElement.port) : '');\r\n },\r\n enumerable: true\r\n },\r\n\r\n 'password': { // TODO\r\n get: function() {\r\n return '';\r\n },\r\n set: function(value) {\r\n },\r\n enumerable: true\r\n },\r\n\r\n 'username': { // TODO\r\n get: function() {\r\n return '';\r\n },\r\n set: function(value) {\r\n },\r\n enumerable: true\r\n },\r\n });\r\n\r\n URL.createObjectURL = function(blob) {\r\n return _URL.createObjectURL.apply(_URL, arguments);\r\n };\r\n\r\n URL.revokeObjectURL = function(url) {\r\n return _URL.revokeObjectURL.apply(_URL, arguments);\r\n };\r\n\r\n global.URL = URL;\r\n\r\n };\r\n\r\n if (!checkIfURLIsSupported()) {\r\n polyfillURL();\r\n }\r\n\r\n if ((global.location !== void 0) && !('origin' in global.location)) {\r\n var getOrigin = function() {\r\n return global.location.protocol + '//' + global.location.hostname + (global.location.port ? 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IN NO EVENT SHALL THE AUTHOR BE LIABLE FOR ANY SPECIAL, DIRECT,\r\nINDIRECT, OR CONSEQUENTIAL DAMAGES OR ANY DAMAGES WHATSOEVER RESULTING FROM\r\nLOSS OF USE, DATA OR PROFITS, WHETHER IN AN ACTION OF CONTRACT, NEGLIGENCE OR\r\nOTHER TORTIOUS ACTION, ARISING OUT OF OR IN CONNECTION WITH THE USE OR\r\nPERFORMANCE OF THIS SOFTWARE.\r\n***************************************************************************** */\r\n/* global global, define, System, Reflect, Promise */\r\nvar __extends;\r\nvar __assign;\r\nvar __rest;\r\nvar __decorate;\r\nvar __param;\r\nvar __metadata;\r\nvar __awaiter;\r\nvar __generator;\r\nvar __exportStar;\r\nvar __values;\r\nvar __read;\r\nvar __spread;\r\nvar __spreadArrays;\r\nvar __spreadArray;\r\nvar __await;\r\nvar __asyncGenerator;\r\nvar __asyncDelegator;\r\nvar __asyncValues;\r\nvar __makeTemplateObject;\r\nvar __importStar;\r\nvar __importDefault;\r\nvar __classPrivateFieldGet;\r\nvar __classPrivateFieldSet;\r\nvar __createBinding;\r\n(function (factory) {\r\n var root = typeof global === \"object\" ? global : typeof self === \"object\" ? self : typeof this === \"object\" ? this : {};\r\n if (typeof define === \"function\" && define.amd) {\r\n define(\"tslib\", [\"exports\"], function (exports) { factory(createExporter(root, createExporter(exports))); });\r\n }\r\n else if (typeof module === \"object\" && typeof module.exports === \"object\") {\r\n factory(createExporter(root, createExporter(module.exports)));\r\n }\r\n else {\r\n factory(createExporter(root));\r\n }\r\n function createExporter(exports, previous) {\r\n if (exports !== root) {\r\n if (typeof Object.create === \"function\") {\r\n Object.defineProperty(exports, \"__esModule\", { value: true });\r\n }\r\n else {\r\n exports.__esModule = true;\r\n }\r\n }\r\n return function (id, v) { return exports[id] = previous ? previous(id, v) : v; };\r\n }\r\n})\r\n(function (exporter) {\r\n var extendStatics = Object.setPrototypeOf ||\r\n ({ __proto__: [] } instanceof Array && function (d, b) { d.__proto__ = b; }) ||\r\n function (d, b) { for (var p in b) if (Object.prototype.hasOwnProperty.call(b, p)) d[p] = b[p]; };\r\n\r\n __extends = function (d, b) {\r\n if (typeof b !== \"function\" && b !== null)\r\n throw new TypeError(\"Class extends value \" + String(b) + \" is not a constructor or null\");\r\n extendStatics(d, b);\r\n function __() { this.constructor = d; }\r\n d.prototype = b === null ? 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'right' : 'left'] = '-9999px'; // Move element to the same position vertically\n\n var yPosition = window.pageYOffset || document.documentElement.scrollTop;\n fakeElement.style.top = \"\".concat(yPosition, \"px\");\n fakeElement.setAttribute('readonly', '');\n fakeElement.value = value;\n return fakeElement;\n}\n;// CONCATENATED MODULE: ./src/actions/copy.js\n\n\n\n/**\n * Create fake copy action wrapper using a fake element.\n * @param {String} target\n * @param {Object} options\n * @return {String}\n */\n\nvar fakeCopyAction = function fakeCopyAction(value, options) {\n var fakeElement = createFakeElement(value);\n options.container.appendChild(fakeElement);\n var selectedText = select_default()(fakeElement);\n command('copy');\n fakeElement.remove();\n return selectedText;\n};\n/**\n * Copy action wrapper.\n * @param {String|HTMLElement} target\n * @param {Object} options\n * @return {String}\n */\n\n\nvar ClipboardActionCopy = function ClipboardActionCopy(target) {\n var options = arguments.length > 1 && arguments[1] !== undefined ? arguments[1] : {\n container: document.body\n };\n var selectedText = '';\n\n if (typeof target === 'string') {\n selectedText = fakeCopyAction(target, options);\n } else if (target instanceof HTMLInputElement && !['text', 'search', 'url', 'tel', 'password'].includes(target === null || target === void 0 ? void 0 : target.type)) {\n // If input type doesn't support `setSelectionRange`. Simulate it. https://developer.mozilla.org/en-US/docs/Web/API/HTMLInputElement/setSelectionRange\n selectedText = fakeCopyAction(target.value, options);\n } else {\n selectedText = select_default()(target);\n command('copy');\n }\n\n return selectedText;\n};\n\n/* harmony default export */ var actions_copy = (ClipboardActionCopy);\n;// CONCATENATED MODULE: ./src/actions/default.js\nfunction _typeof(obj) { \"@babel/helpers - typeof\"; if (typeof Symbol === \"function\" && typeof Symbol.iterator === \"symbol\") { _typeof = function _typeof(obj) { return typeof obj; }; } else { _typeof = function _typeof(obj) { return obj && typeof Symbol === \"function\" && obj.constructor === Symbol && obj !== Symbol.prototype ? \"symbol\" : typeof obj; }; } return _typeof(obj); }\n\n\n\n/**\n * Inner function which performs selection from either `text` or `target`\n * properties and then executes copy or cut operations.\n * @param {Object} options\n */\n\nvar ClipboardActionDefault = function ClipboardActionDefault() {\n var options = arguments.length > 0 && arguments[0] !== undefined ? arguments[0] : {};\n // Defines base properties passed from constructor.\n var _options$action = options.action,\n action = _options$action === void 0 ? 'copy' : _options$action,\n container = options.container,\n target = options.target,\n text = options.text; // Sets the `action` to be performed which can be either 'copy' or 'cut'.\n\n if (action !== 'copy' && action !== 'cut') {\n throw new Error('Invalid \"action\" value, use either \"copy\" or \"cut\"');\n } // Sets the `target` property using an element that will be have its content copied.\n\n\n if (target !== undefined) {\n if (target && _typeof(target) === 'object' && target.nodeType === 1) {\n if (action === 'copy' && target.hasAttribute('disabled')) {\n throw new Error('Invalid \"target\" attribute. Please use \"readonly\" instead of \"disabled\" attribute');\n }\n\n if (action === 'cut' && (target.hasAttribute('readonly') || target.hasAttribute('disabled'))) {\n throw new Error('Invalid \"target\" attribute. You can\\'t cut text from elements with \"readonly\" or \"disabled\" attributes');\n }\n } else {\n throw new Error('Invalid \"target\" value, use a valid Element');\n }\n } // Define selection strategy based on `text` property.\n\n\n if (text) {\n return actions_copy(text, {\n container: container\n });\n } // Defines which selection strategy based on `target` property.\n\n\n if (target) {\n return action === 'cut' ? actions_cut(target) : actions_copy(target, {\n container: container\n });\n }\n};\n\n/* harmony default export */ var actions_default = (ClipboardActionDefault);\n;// CONCATENATED MODULE: ./src/clipboard.js\nfunction clipboard_typeof(obj) { \"@babel/helpers - typeof\"; if (typeof Symbol === \"function\" && typeof Symbol.iterator === \"symbol\") { clipboard_typeof = function _typeof(obj) { return typeof obj; }; } else { clipboard_typeof = function _typeof(obj) { return obj && typeof Symbol === \"function\" && obj.constructor === Symbol && obj !== Symbol.prototype ? \"symbol\" : typeof obj; }; } return clipboard_typeof(obj); }\n\nfunction _classCallCheck(instance, Constructor) { if (!(instance instanceof Constructor)) { throw new TypeError(\"Cannot call a class as a function\"); } }\n\nfunction _defineProperties(target, props) { for (var i = 0; i < props.length; i++) { var descriptor = props[i]; descriptor.enumerable = descriptor.enumerable || false; descriptor.configurable = true; if (\"value\" in descriptor) descriptor.writable = true; Object.defineProperty(target, descriptor.key, descriptor); } }\n\nfunction _createClass(Constructor, protoProps, staticProps) { if (protoProps) _defineProperties(Constructor.prototype, protoProps); if (staticProps) _defineProperties(Constructor, staticProps); return Constructor; }\n\nfunction _inherits(subClass, superClass) { if (typeof superClass !== \"function\" && superClass !== null) { throw new TypeError(\"Super expression must either be null or a function\"); } subClass.prototype = Object.create(superClass && superClass.prototype, { constructor: { value: subClass, writable: true, configurable: true } }); if (superClass) _setPrototypeOf(subClass, superClass); }\n\nfunction _setPrototypeOf(o, p) { _setPrototypeOf = Object.setPrototypeOf || function _setPrototypeOf(o, p) { o.__proto__ = p; return o; }; return _setPrototypeOf(o, p); }\n\nfunction _createSuper(Derived) { var hasNativeReflectConstruct = _isNativeReflectConstruct(); return function _createSuperInternal() { var Super = _getPrototypeOf(Derived), result; if (hasNativeReflectConstruct) { var NewTarget = _getPrototypeOf(this).constructor; result = Reflect.construct(Super, arguments, NewTarget); } else { result = Super.apply(this, arguments); } return _possibleConstructorReturn(this, result); }; }\n\nfunction _possibleConstructorReturn(self, call) { if (call && (clipboard_typeof(call) === \"object\" || typeof call === \"function\")) { return call; } return _assertThisInitialized(self); }\n\nfunction _assertThisInitialized(self) { if (self === void 0) { throw new ReferenceError(\"this hasn't been initialised - super() hasn't been called\"); } return self; }\n\nfunction _isNativeReflectConstruct() { if (typeof Reflect === \"undefined\" || !Reflect.construct) return false; if (Reflect.construct.sham) return false; if (typeof Proxy === \"function\") return true; try { Date.prototype.toString.call(Reflect.construct(Date, [], function () {})); return true; } catch (e) { return false; } }\n\nfunction _getPrototypeOf(o) { _getPrototypeOf = Object.setPrototypeOf ? Object.getPrototypeOf : function _getPrototypeOf(o) { return o.__proto__ || Object.getPrototypeOf(o); }; return _getPrototypeOf(o); }\n\n\n\n\n\n\n/**\n * Helper function to retrieve attribute value.\n * @param {String} suffix\n * @param {Element} element\n */\n\nfunction getAttributeValue(suffix, element) {\n var attribute = \"data-clipboard-\".concat(suffix);\n\n if (!element.hasAttribute(attribute)) {\n return;\n }\n\n return element.getAttribute(attribute);\n}\n/**\n * Base class which takes one or more elements, adds event listeners to them,\n * and instantiates a new `ClipboardAction` on each click.\n */\n\n\nvar Clipboard = /*#__PURE__*/function (_Emitter) {\n _inherits(Clipboard, _Emitter);\n\n var _super = _createSuper(Clipboard);\n\n /**\n * @param {String|HTMLElement|HTMLCollection|NodeList} trigger\n * @param {Object} options\n */\n function Clipboard(trigger, options) {\n var _this;\n\n _classCallCheck(this, Clipboard);\n\n _this = _super.call(this);\n\n _this.resolveOptions(options);\n\n _this.listenClick(trigger);\n\n return _this;\n }\n /**\n * Defines if attributes would be resolved using internal setter functions\n * or custom functions that were passed in the constructor.\n * @param {Object} options\n */\n\n\n _createClass(Clipboard, [{\n key: \"resolveOptions\",\n value: function resolveOptions() {\n var options = arguments.length > 0 && arguments[0] !== undefined ? arguments[0] : {};\n this.action = typeof options.action === 'function' ? options.action : this.defaultAction;\n this.target = typeof options.target === 'function' ? options.target : this.defaultTarget;\n this.text = typeof options.text === 'function' ? options.text : this.defaultText;\n this.container = clipboard_typeof(options.container) === 'object' ? options.container : document.body;\n }\n /**\n * Adds a click event listener to the passed trigger.\n * @param {String|HTMLElement|HTMLCollection|NodeList} trigger\n */\n\n }, {\n key: \"listenClick\",\n value: function listenClick(trigger) {\n var _this2 = this;\n\n this.listener = listen_default()(trigger, 'click', function (e) {\n return _this2.onClick(e);\n });\n }\n /**\n * Defines a new `ClipboardAction` on each click event.\n * @param {Event} e\n */\n\n }, {\n key: \"onClick\",\n value: function onClick(e) {\n var trigger = e.delegateTarget || e.currentTarget;\n var action = this.action(trigger) || 'copy';\n var text = actions_default({\n action: action,\n container: this.container,\n target: this.target(trigger),\n text: this.text(trigger)\n }); // Fires an event based on the copy operation result.\n\n this.emit(text ? 'success' : 'error', {\n action: action,\n text: text,\n trigger: trigger,\n clearSelection: function clearSelection() {\n if (trigger) {\n trigger.focus();\n }\n\n window.getSelection().removeAllRanges();\n }\n });\n }\n /**\n * Default `action` lookup function.\n * @param {Element} trigger\n */\n\n }, {\n key: \"defaultAction\",\n value: function defaultAction(trigger) {\n return getAttributeValue('action', trigger);\n }\n /**\n * Default `target` lookup function.\n * @param {Element} trigger\n */\n\n }, {\n key: \"defaultTarget\",\n value: function defaultTarget(trigger) {\n var selector = getAttributeValue('target', trigger);\n\n if (selector) {\n return document.querySelector(selector);\n }\n }\n /**\n * Allow fire programmatically a copy action\n * @param {String|HTMLElement} target\n * @param {Object} options\n * @returns Text copied.\n */\n\n }, {\n key: \"defaultText\",\n\n /**\n * Default `text` lookup function.\n * @param {Element} trigger\n */\n value: function defaultText(trigger) {\n return getAttributeValue('text', trigger);\n }\n /**\n * Destroy lifecycle.\n */\n\n }, {\n key: \"destroy\",\n value: function destroy() {\n this.listener.destroy();\n }\n }], [{\n key: \"copy\",\n value: function copy(target) {\n var options = arguments.length > 1 && arguments[1] !== undefined ? arguments[1] : {\n container: document.body\n };\n return actions_copy(target, options);\n }\n /**\n * Allow fire programmatically a cut action\n * @param {String|HTMLElement} target\n * @returns Text cutted.\n */\n\n }, {\n key: \"cut\",\n value: function cut(target) {\n return actions_cut(target);\n }\n /**\n * Returns the support of the given action, or all actions if no action is\n * given.\n * @param {String} [action]\n */\n\n }, {\n key: \"isSupported\",\n value: function isSupported() {\n var action = arguments.length > 0 && arguments[0] !== undefined ? arguments[0] : ['copy', 'cut'];\n var actions = typeof action === 'string' ? [action] : action;\n var support = !!document.queryCommandSupported;\n actions.forEach(function (action) {\n support = support && !!document.queryCommandSupported(action);\n });\n return support;\n }\n }]);\n\n return Clipboard;\n}((tiny_emitter_default()));\n\n/* harmony default export */ var clipboard = (Clipboard);\n\n/***/ }),\n\n/***/ 828:\n/***/ (function(module) {\n\nvar DOCUMENT_NODE_TYPE = 9;\n\n/**\n * A polyfill for Element.matches()\n */\nif (typeof Element !== 'undefined' && !Element.prototype.matches) {\n var proto = Element.prototype;\n\n proto.matches = proto.matchesSelector ||\n proto.mozMatchesSelector ||\n proto.msMatchesSelector ||\n proto.oMatchesSelector ||\n proto.webkitMatchesSelector;\n}\n\n/**\n * Finds the closest parent that matches a selector.\n *\n * @param {Element} element\n * @param {String} selector\n * @return {Function}\n */\nfunction closest (element, selector) {\n while (element && element.nodeType !== DOCUMENT_NODE_TYPE) {\n if (typeof element.matches === 'function' &&\n element.matches(selector)) {\n return element;\n }\n element = element.parentNode;\n }\n}\n\nmodule.exports = closest;\n\n\n/***/ }),\n\n/***/ 438:\n/***/ (function(module, __unused_webpack_exports, __webpack_require__) {\n\nvar closest = __webpack_require__(828);\n\n/**\n * Delegates event to a selector.\n *\n * @param {Element} element\n * @param {String} selector\n * @param {String} type\n * @param {Function} callback\n * @param {Boolean} useCapture\n * @return {Object}\n */\nfunction _delegate(element, selector, type, callback, useCapture) {\n var listenerFn = listener.apply(this, arguments);\n\n element.addEventListener(type, listenerFn, useCapture);\n\n return {\n destroy: function() {\n element.removeEventListener(type, listenerFn, useCapture);\n }\n }\n}\n\n/**\n * Delegates event to a selector.\n *\n * @param {Element|String|Array} [elements]\n * @param {String} selector\n * @param {String} type\n * @param {Function} callback\n * @param {Boolean} useCapture\n * @return {Object}\n */\nfunction delegate(elements, selector, type, callback, useCapture) {\n // Handle the regular Element usage\n if (typeof elements.addEventListener === 'function') {\n return _delegate.apply(null, arguments);\n }\n\n // Handle Element-less usage, it defaults to global delegation\n if (typeof type === 'function') {\n // Use `document` as the first parameter, then apply arguments\n // This is a short way to .unshift `arguments` without running into deoptimizations\n return _delegate.bind(null, document).apply(null, arguments);\n }\n\n // Handle Selector-based usage\n if (typeof elements === 'string') {\n elements = document.querySelectorAll(elements);\n }\n\n // Handle Array-like based usage\n return Array.prototype.map.call(elements, function (element) {\n return _delegate(element, selector, type, callback, useCapture);\n });\n}\n\n/**\n * Finds closest match and invokes callback.\n *\n * @param {Element} element\n * @param {String} selector\n * @param {String} type\n * @param {Function} callback\n * @return {Function}\n */\nfunction listener(element, selector, type, callback) {\n return function(e) {\n e.delegateTarget = closest(e.target, selector);\n\n if (e.delegateTarget) {\n callback.call(element, e);\n }\n }\n}\n\nmodule.exports = delegate;\n\n\n/***/ }),\n\n/***/ 879:\n/***/ (function(__unused_webpack_module, exports) {\n\n/**\n * Check if argument is a HTML element.\n *\n * @param {Object} value\n * @return {Boolean}\n */\nexports.node = function(value) {\n return value !== undefined\n && value instanceof HTMLElement\n && value.nodeType === 1;\n};\n\n/**\n * Check if argument is a list of HTML elements.\n *\n * @param {Object} value\n * @return {Boolean}\n */\nexports.nodeList = function(value) {\n var type = Object.prototype.toString.call(value);\n\n return value !== undefined\n && (type === '[object NodeList]' || type === '[object HTMLCollection]')\n && ('length' in value)\n && (value.length === 0 || exports.node(value[0]));\n};\n\n/**\n * Check if argument is a string.\n *\n * @param {Object} value\n * @return {Boolean}\n */\nexports.string = function(value) {\n return typeof value === 'string'\n || value instanceof String;\n};\n\n/**\n * Check if argument is a function.\n *\n * @param {Object} value\n * @return {Boolean}\n */\nexports.fn = function(value) {\n var type = Object.prototype.toString.call(value);\n\n return type === '[object Function]';\n};\n\n\n/***/ }),\n\n/***/ 370:\n/***/ (function(module, __unused_webpack_exports, __webpack_require__) {\n\nvar is = __webpack_require__(879);\nvar delegate = __webpack_require__(438);\n\n/**\n * Validates all params and calls the right\n * listener function based on its target type.\n *\n * @param {String|HTMLElement|HTMLCollection|NodeList} target\n * @param {String} type\n * @param {Function} callback\n * @return {Object}\n */\nfunction listen(target, type, callback) {\n if (!target && !type && !callback) {\n throw new Error('Missing required arguments');\n }\n\n if (!is.string(type)) {\n throw new TypeError('Second argument must be a String');\n }\n\n if (!is.fn(callback)) {\n throw new TypeError('Third argument must be a Function');\n }\n\n if (is.node(target)) {\n return listenNode(target, type, callback);\n }\n else if (is.nodeList(target)) {\n return listenNodeList(target, type, callback);\n }\n else if (is.string(target)) {\n return listenSelector(target, type, callback);\n }\n else {\n throw new TypeError('First argument must be a String, HTMLElement, HTMLCollection, or NodeList');\n }\n}\n\n/**\n * Adds an event listener to a HTML element\n * and returns a remove listener function.\n *\n * @param {HTMLElement} node\n * @param {String} type\n * @param {Function} callback\n * @return {Object}\n */\nfunction listenNode(node, type, callback) {\n node.addEventListener(type, callback);\n\n return {\n destroy: function() {\n node.removeEventListener(type, callback);\n }\n }\n}\n\n/**\n * Add an event listener to a list of HTML elements\n * and returns a remove listener function.\n *\n * @param {NodeList|HTMLCollection} nodeList\n * @param {String} type\n * @param {Function} callback\n * @return {Object}\n */\nfunction listenNodeList(nodeList, type, callback) {\n Array.prototype.forEach.call(nodeList, function(node) {\n node.addEventListener(type, callback);\n });\n\n return {\n destroy: function() {\n Array.prototype.forEach.call(nodeList, function(node) {\n node.removeEventListener(type, callback);\n });\n }\n }\n}\n\n/**\n * Add an event listener to a selector\n * and returns a remove listener function.\n *\n * @param {String} selector\n * @param {String} type\n * @param {Function} callback\n * @return {Object}\n */\nfunction listenSelector(selector, type, callback) {\n return delegate(document.body, selector, type, callback);\n}\n\nmodule.exports = listen;\n\n\n/***/ }),\n\n/***/ 817:\n/***/ (function(module) {\n\nfunction select(element) {\n var selectedText;\n\n if (element.nodeName === 'SELECT') {\n element.focus();\n\n selectedText = element.value;\n }\n else if (element.nodeName === 'INPUT' || element.nodeName === 'TEXTAREA') {\n var isReadOnly = element.hasAttribute('readonly');\n\n if (!isReadOnly) {\n element.setAttribute('readonly', '');\n }\n\n element.select();\n element.setSelectionRange(0, element.value.length);\n\n if (!isReadOnly) {\n element.removeAttribute('readonly');\n }\n\n selectedText = element.value;\n }\n else {\n if (element.hasAttribute('contenteditable')) {\n element.focus();\n }\n\n var selection = window.getSelection();\n var range = document.createRange();\n\n range.selectNodeContents(element);\n selection.removeAllRanges();\n selection.addRange(range);\n\n selectedText = selection.toString();\n }\n\n return selectedText;\n}\n\nmodule.exports = select;\n\n\n/***/ }),\n\n/***/ 279:\n/***/ (function(module) {\n\nfunction E () {\n // Keep this empty so it's easier to inherit from\n // (via https://github.com/lipsmack from https://github.com/scottcorgan/tiny-emitter/issues/3)\n}\n\nE.prototype = {\n on: function (name, callback, ctx) {\n var e = this.e || (this.e = {});\n\n (e[name] || (e[name] = [])).push({\n fn: callback,\n ctx: ctx\n });\n\n return this;\n },\n\n once: function (name, callback, ctx) {\n var self = this;\n function listener () {\n self.off(name, listener);\n callback.apply(ctx, arguments);\n };\n\n listener._ = callback\n return this.on(name, listener, ctx);\n },\n\n emit: function (name) {\n var data = [].slice.call(arguments, 1);\n var evtArr = ((this.e || (this.e = {}))[name] || []).slice();\n var i = 0;\n var len = evtArr.length;\n\n for (i; i < len; i++) {\n evtArr[i].fn.apply(evtArr[i].ctx, data);\n }\n\n return this;\n },\n\n off: function (name, callback) {\n var e = this.e || (this.e = {});\n var evts = e[name];\n var liveEvents = [];\n\n if (evts && callback) {\n for (var i = 0, len = evts.length; i < len; i++) {\n if (evts[i].fn !== callback && evts[i].fn._ !== callback)\n liveEvents.push(evts[i]);\n }\n }\n\n // Remove event from queue to prevent memory leak\n // Suggested by https://github.com/lazd\n // Ref: https://github.com/scottcorgan/tiny-emitter/commit/c6ebfaa9bc973b33d110a84a307742b7cf94c953#commitcomment-5024910\n\n (liveEvents.length)\n ? e[name] = liveEvents\n : delete e[name];\n\n return this;\n }\n};\n\nmodule.exports = E;\nmodule.exports.TinyEmitter = E;\n\n\n/***/ })\n\n/******/ \t});\n/************************************************************************/\n/******/ \t// The module cache\n/******/ \tvar __webpack_module_cache__ = {};\n/******/ \t\n/******/ \t// The require function\n/******/ \tfunction __webpack_require__(moduleId) {\n/******/ \t\t// Check if module is in cache\n/******/ \t\tif(__webpack_module_cache__[moduleId]) {\n/******/ \t\t\treturn __webpack_module_cache__[moduleId].exports;\n/******/ \t\t}\n/******/ \t\t// Create a new module (and put it into the cache)\n/******/ \t\tvar module = __webpack_module_cache__[moduleId] = {\n/******/ \t\t\t// no module.id needed\n/******/ \t\t\t// no module.loaded needed\n/******/ \t\t\texports: {}\n/******/ \t\t};\n/******/ \t\n/******/ \t\t// Execute the module function\n/******/ \t\t__webpack_modules__[moduleId](module, module.exports, __webpack_require__);\n/******/ \t\n/******/ \t\t// Return the exports of the module\n/******/ \t\treturn module.exports;\n/******/ \t}\n/******/ \t\n/************************************************************************/\n/******/ \t/* webpack/runtime/compat get default export */\n/******/ \t!function() {\n/******/ \t\t// getDefaultExport function for compatibility with non-harmony modules\n/******/ \t\t__webpack_require__.n = function(module) {\n/******/ \t\t\tvar getter = module && module.__esModule ?\n/******/ \t\t\t\tfunction() { return module['default']; } :\n/******/ \t\t\t\tfunction() { return module; };\n/******/ \t\t\t__webpack_require__.d(getter, { a: getter });\n/******/ \t\t\treturn getter;\n/******/ \t\t};\n/******/ \t}();\n/******/ \t\n/******/ \t/* webpack/runtime/define property getters */\n/******/ \t!function() {\n/******/ \t\t// define getter functions for harmony exports\n/******/ \t\t__webpack_require__.d = function(exports, definition) {\n/******/ \t\t\tfor(var key in definition) {\n/******/ \t\t\t\tif(__webpack_require__.o(definition, key) && !__webpack_require__.o(exports, key)) {\n/******/ \t\t\t\t\tObject.defineProperty(exports, key, { enumerable: true, get: definition[key] });\n/******/ \t\t\t\t}\n/******/ \t\t\t}\n/******/ \t\t};\n/******/ \t}();\n/******/ \t\n/******/ \t/* webpack/runtime/hasOwnProperty shorthand */\n/******/ \t!function() {\n/******/ \t\t__webpack_require__.o = function(obj, prop) { return Object.prototype.hasOwnProperty.call(obj, prop); }\n/******/ \t}();\n/******/ \t\n/************************************************************************/\n/******/ \t// module exports must be returned from runtime so entry inlining is disabled\n/******/ \t// startup\n/******/ \t// Load entry module and return exports\n/******/ \treturn __webpack_require__(686);\n/******/ })()\n.default;\n});", "/*!\n * escape-html\n * Copyright(c) 2012-2013 TJ Holowaychuk\n * Copyright(c) 2015 Andreas Lubbe\n * Copyright(c) 2015 Tiancheng \"Timothy\" Gu\n * MIT Licensed\n */\n\n'use strict';\n\n/**\n * Module variables.\n * @private\n */\n\nvar matchHtmlRegExp = /[\"'&<>]/;\n\n/**\n * Module exports.\n * @public\n */\n\nmodule.exports = escapeHtml;\n\n/**\n * Escape special characters in the given string of html.\n *\n * @param {string} string The string to escape for inserting into HTML\n * @return {string}\n * @public\n */\n\nfunction escapeHtml(string) {\n var str = '' + string;\n var match = matchHtmlRegExp.exec(str);\n\n if (!match) {\n return str;\n }\n\n var escape;\n var html = '';\n var index = 0;\n var lastIndex = 0;\n\n for (index = match.index; index < str.length; index++) {\n switch (str.charCodeAt(index)) {\n case 34: // \"\n escape = '"';\n break;\n case 38: // &\n escape = '&';\n break;\n case 39: // '\n escape = ''';\n break;\n case 60: // <\n escape = '<';\n break;\n case 62: // >\n escape = '>';\n break;\n default:\n continue;\n }\n\n if (lastIndex !== index) {\n html += str.substring(lastIndex, index);\n }\n\n lastIndex = index + 1;\n html += escape;\n }\n\n return lastIndex !== index\n ? html + str.substring(lastIndex, index)\n : html;\n}\n", "Array.prototype.flat||Object.defineProperty(Array.prototype,\"flat\",{configurable:!0,value:function r(){var t=isNaN(arguments[0])?1:Number(arguments[0]);return t?Array.prototype.reduce.call(this,function(a,e){return Array.isArray(e)?a.push.apply(a,r.call(e,t-1)):a.push(e),a},[]):Array.prototype.slice.call(this)},writable:!0}),Array.prototype.flatMap||Object.defineProperty(Array.prototype,\"flatMap\",{configurable:!0,value:function(r){return Array.prototype.map.apply(this,arguments).flat()},writable:!0})\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport \"array-flat-polyfill\"\nimport \"focus-visible\"\nimport \"unfetch/polyfill\"\nimport \"url-polyfill\"\n\nimport {\n EMPTY,\n NEVER,\n Subject,\n defer,\n delay,\n filter,\n map,\n merge,\n mergeWith,\n shareReplay,\n switchMap\n} from \"rxjs\"\n\nimport { configuration, feature } from \"./_\"\nimport {\n at,\n getOptionalElement,\n requestJSON,\n setToggle,\n watchDocument,\n watchKeyboard,\n watchLocation,\n watchLocationTarget,\n watchMedia,\n watchPrint,\n watchViewport\n} from \"./browser\"\nimport {\n getComponentElement,\n getComponentElements,\n mountAnnounce,\n mountBackToTop,\n mountConsent,\n mountContent,\n mountDialog,\n mountHeader,\n mountHeaderTitle,\n mountPalette,\n mountSearch,\n mountSearchHiglight,\n mountSidebar,\n mountSource,\n mountTableOfContents,\n mountTabs,\n watchHeader,\n watchMain\n} from \"./components\"\nimport {\n SearchIndex,\n setupClipboardJS,\n setupInstantLoading,\n setupVersionSelector\n} from \"./integrations\"\nimport {\n patchIndeterminate,\n patchScrollfix,\n patchScrolllock\n} from \"./patches\"\nimport \"./polyfills\"\n\n/* ----------------------------------------------------------------------------\n * Application\n * ------------------------------------------------------------------------- */\n\n/* Yay, JavaScript is available */\ndocument.documentElement.classList.remove(\"no-js\")\ndocument.documentElement.classList.add(\"js\")\n\n/* Set up navigation observables and subjects */\nconst document$ = watchDocument()\nconst location$ = watchLocation()\nconst target$ = watchLocationTarget()\nconst keyboard$ = watchKeyboard()\n\n/* Set up media observables */\nconst viewport$ = watchViewport()\nconst tablet$ = watchMedia(\"(min-width: 960px)\")\nconst screen$ = watchMedia(\"(min-width: 1220px)\")\nconst print$ = watchPrint()\n\n/* Retrieve search index, if search is enabled */\nconst config = configuration()\nconst index$ = document.forms.namedItem(\"search\")\n ? __search?.index || requestJSON(\n new URL(\"search/search_index.json\", config.base)\n )\n : NEVER\n\n/* Set up Clipboard.js integration */\nconst alert$ = new Subject()\nsetupClipboardJS({ alert$ })\n\n/* Set up instant loading, if enabled */\nif (feature(\"navigation.instant\"))\n setupInstantLoading({ document$, location$, viewport$ })\n\n/* Set up version selector */\nif (config.version?.provider === \"mike\")\n setupVersionSelector({ document$ })\n\n/* Always close drawer and search on navigation */\nmerge(location$, target$)\n .pipe(\n delay(125)\n )\n .subscribe(() => {\n setToggle(\"drawer\", false)\n setToggle(\"search\", false)\n })\n\n/* Set up global keyboard handlers */\nkeyboard$\n .pipe(\n filter(({ mode }) => mode === \"global\")\n )\n .subscribe(key => {\n switch (key.type) {\n\n /* Go to previous page */\n case \"p\":\n case \",\":\n const prev = getOptionalElement(\"[href][rel=prev]\")\n if (typeof prev !== \"undefined\")\n prev.click()\n break\n\n /* Go to next page */\n case \"n\":\n case \".\":\n const next = getOptionalElement(\"[href][rel=next]\")\n if (typeof next !== \"undefined\")\n next.click()\n break\n }\n })\n\n/* Set up patches */\npatchIndeterminate({ document$, tablet$ })\npatchScrollfix({ document$ })\npatchScrolllock({ viewport$, tablet$ })\n\n/* Set up header and main area observable */\nconst header$ = watchHeader(getComponentElement(\"header\"), { viewport$ })\nconst main$ = document$\n .pipe(\n map(() => getComponentElement(\"main\")),\n switchMap(el => watchMain(el, { viewport$, header$ })),\n shareReplay(1)\n )\n\n/* Set up control component observables */\nconst control$ = merge(\n\n /* Consent */\n ...getComponentElements(\"consent\")\n .map(el => mountConsent(el, { target$ })),\n\n /* Dialog */\n ...getComponentElements(\"dialog\")\n .map(el => mountDialog(el, { alert$ })),\n\n /* Header */\n ...getComponentElements(\"header\")\n .map(el => mountHeader(el, { viewport$, header$, main$ })),\n\n /* Color palette */\n ...getComponentElements(\"palette\")\n .map(el => mountPalette(el)),\n\n /* Search */\n ...getComponentElements(\"search\")\n .map(el => mountSearch(el, { index$, keyboard$ })),\n\n /* Repository information */\n ...getComponentElements(\"source\")\n .map(el => mountSource(el))\n)\n\n/* Set up content component observables */\nconst content$ = defer(() => merge(\n\n /* Announcement bar */\n ...getComponentElements(\"announce\")\n .map(el => mountAnnounce(el)),\n\n /* Content */\n ...getComponentElements(\"content\")\n .map(el => mountContent(el, { viewport$, target$, print$ })),\n\n /* Search highlighting */\n ...getComponentElements(\"content\")\n .map(el => feature(\"search.highlight\")\n ? mountSearchHiglight(el, { index$, location$ })\n : EMPTY\n ),\n\n /* Header title */\n ...getComponentElements(\"header-title\")\n .map(el => mountHeaderTitle(el, { viewport$, header$ })),\n\n /* Sidebar */\n ...getComponentElements(\"sidebar\")\n .map(el => el.getAttribute(\"data-md-type\") === \"navigation\"\n ? at(screen$, () => mountSidebar(el, { viewport$, header$, main$ }))\n : at(tablet$, () => mountSidebar(el, { viewport$, header$, main$ }))\n ),\n\n /* Navigation tabs */\n ...getComponentElements(\"tabs\")\n .map(el => mountTabs(el, { viewport$, header$ })),\n\n /* Table of contents */\n ...getComponentElements(\"toc\")\n .map(el => mountTableOfContents(el, { viewport$, header$, target$ })),\n\n /* Back-to-top button */\n ...getComponentElements(\"top\")\n .map(el => mountBackToTop(el, { viewport$, header$, main$, target$ }))\n))\n\n/* Set up component observables */\nconst component$ = document$\n .pipe(\n switchMap(() => content$),\n mergeWith(control$),\n shareReplay(1)\n )\n\n/* Subscribe to all components */\ncomponent$.subscribe()\n\n/* ----------------------------------------------------------------------------\n * Exports\n * ------------------------------------------------------------------------- */\n\nwindow.document$ = document$ /* Document observable */\nwindow.location$ = location$ /* Location subject */\nwindow.target$ = target$ /* Location target observable */\nwindow.keyboard$ = keyboard$ /* Keyboard observable */\nwindow.viewport$ = viewport$ /* Viewport observable */\nwindow.tablet$ = tablet$ /* Media tablet observable */\nwindow.screen$ = screen$ /* Media screen observable */\nwindow.print$ = print$ /* Media print observable */\nwindow.alert$ = alert$ /* Alert subject */\nwindow.component$ = component$ /* Component observable */\n", "self.fetch||(self.fetch=function(e,n){return n=n||{},new Promise(function(t,s){var r=new XMLHttpRequest,o=[],u=[],i={},a=function(){return{ok:2==(r.status/100|0),statusText:r.statusText,status:r.status,url:r.responseURL,text:function(){return Promise.resolve(r.responseText)},json:function(){return Promise.resolve(r.responseText).then(JSON.parse)},blob:function(){return Promise.resolve(new Blob([r.response]))},clone:a,headers:{keys:function(){return o},entries:function(){return u},get:function(e){return i[e.toLowerCase()]},has:function(e){return e.toLowerCase()in i}}}};for(var c in r.open(n.method||\"get\",e,!0),r.onload=function(){r.getAllResponseHeaders().replace(/^(.*?):[^\\S\\n]*([\\s\\S]*?)$/gm,function(e,n,t){o.push(n=n.toLowerCase()),u.push([n,t]),i[n]=i[n]?i[n]+\",\"+t:t}),t(a())},r.onerror=s,r.withCredentials=\"include\"==n.credentials,n.headers)r.setRequestHeader(c,n.headers[c]);r.send(n.body||null)})});\n", "import tslib from '../tslib.js';\r\nconst {\r\n __extends,\r\n __assign,\r\n __rest,\r\n __decorate,\r\n __param,\r\n __metadata,\r\n __awaiter,\r\n __generator,\r\n __exportStar,\r\n __createBinding,\r\n __values,\r\n __read,\r\n __spread,\r\n __spreadArrays,\r\n __spreadArray,\r\n __await,\r\n __asyncGenerator,\r\n __asyncDelegator,\r\n __asyncValues,\r\n __makeTemplateObject,\r\n __importStar,\r\n __importDefault,\r\n __classPrivateFieldGet,\r\n __classPrivateFieldSet,\r\n} = tslib;\r\nexport {\r\n __extends,\r\n __assign,\r\n __rest,\r\n __decorate,\r\n __param,\r\n __metadata,\r\n __awaiter,\r\n __generator,\r\n __exportStar,\r\n __createBinding,\r\n __values,\r\n __read,\r\n __spread,\r\n __spreadArrays,\r\n __spreadArray,\r\n __await,\r\n __asyncGenerator,\r\n __asyncDelegator,\r\n __asyncValues,\r\n __makeTemplateObject,\r\n __importStar,\r\n __importDefault,\r\n __classPrivateFieldGet,\r\n __classPrivateFieldSet,\r\n};\r\n", null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n ReplaySubject,\n Subject,\n fromEvent\n} from \"rxjs\"\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Watch document\n *\n * Documents are implemented as subjects, so all downstream observables are\n * automatically updated when a new document is emitted.\n *\n * @returns Document subject\n */\nexport function watchDocument(): Subject {\n const document$ = new ReplaySubject(1)\n fromEvent(document, \"DOMContentLoaded\", { once: true })\n .subscribe(() => document$.next(document))\n\n /* Return document */\n return document$\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Retrieve all elements matching the query selector\n *\n * @template T - Element type\n *\n * @param selector - Query selector\n * @param node - Node of reference\n *\n * @returns Elements\n */\nexport function getElements(\n selector: T, node?: ParentNode\n): HTMLElementTagNameMap[T][]\n\nexport function getElements(\n selector: string, node?: ParentNode\n): T[]\n\nexport function getElements(\n selector: string, node: ParentNode = document\n): T[] {\n return Array.from(node.querySelectorAll(selector))\n}\n\n/**\n * Retrieve an element matching a query selector or throw a reference error\n *\n * Note that this function assumes that the element is present. If unsure if an\n * element is existent, use the `getOptionalElement` function instead.\n *\n * @template T - Element type\n *\n * @param selector - Query selector\n * @param node - Node of reference\n *\n * @returns Element\n */\nexport function getElement(\n selector: T, node?: ParentNode\n): HTMLElementTagNameMap[T]\n\nexport function getElement(\n selector: string, node?: ParentNode\n): T\n\nexport function getElement(\n selector: string, node: ParentNode = document\n): T {\n const el = getOptionalElement(selector, node)\n if (typeof el === \"undefined\")\n throw new ReferenceError(\n `Missing element: expected \"${selector}\" to be present`\n )\n\n /* Return element */\n return el\n}\n\n/* ------------------------------------------------------------------------- */\n\n/**\n * Retrieve an optional element matching the query selector\n *\n * @template T - Element type\n *\n * @param selector - Query selector\n * @param node - Node of reference\n *\n * @returns Element or nothing\n */\nexport function getOptionalElement(\n selector: T, node?: ParentNode\n): HTMLElementTagNameMap[T] | undefined\n\nexport function getOptionalElement(\n selector: string, node?: ParentNode\n): T | undefined\n\nexport function getOptionalElement(\n selector: string, node: ParentNode = document\n): T | undefined {\n return node.querySelector(selector) || undefined\n}\n\n/**\n * Retrieve the currently active element\n *\n * @returns Element or nothing\n */\nexport function getActiveElement(): HTMLElement | undefined {\n return document.activeElement instanceof HTMLElement\n ? document.activeElement || undefined\n : undefined\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n Observable,\n debounceTime,\n distinctUntilChanged,\n fromEvent,\n map,\n merge,\n startWith\n} from \"rxjs\"\n\nimport { getActiveElement } from \"../_\"\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Watch element focus\n *\n * Previously, this function used `focus` and `blur` events to determine whether\n * an element is focused, but this doesn't work if there are focusable elements\n * within the elements itself. A better solutions are `focusin` and `focusout`\n * events, which bubble up the tree and allow for more fine-grained control.\n *\n * `debounceTime` is necessary, because when a focus change happens inside an\n * element, the observable would first emit `false` and then `true` again.\n *\n * @param el - Element\n *\n * @returns Element focus observable\n */\nexport function watchElementFocus(\n el: HTMLElement\n): Observable {\n return merge(\n fromEvent(document.body, \"focusin\"),\n fromEvent(document.body, \"focusout\")\n )\n .pipe(\n debounceTime(1),\n map(() => {\n const active = getActiveElement()\n return typeof active !== \"undefined\"\n ? el.contains(active)\n : false\n }),\n startWith(el === getActiveElement()),\n distinctUntilChanged()\n )\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n Observable,\n animationFrameScheduler,\n auditTime,\n fromEvent,\n map,\n merge,\n startWith\n} from \"rxjs\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Element offset\n */\nexport interface ElementOffset {\n x: number /* Horizontal offset */\n y: number /* Vertical offset */\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Retrieve element offset\n *\n * @param el - Element\n *\n * @returns Element offset\n */\nexport function getElementOffset(\n el: HTMLElement\n): ElementOffset {\n return {\n x: el.offsetLeft,\n y: el.offsetTop\n }\n}\n\n/* ------------------------------------------------------------------------- */\n\n/**\n * Watch element offset\n *\n * @param el - Element\n *\n * @returns Element offset observable\n */\nexport function watchElementOffset(\n el: HTMLElement\n): Observable {\n return merge(\n fromEvent(window, \"load\"),\n fromEvent(window, \"resize\")\n )\n .pipe(\n auditTime(0, animationFrameScheduler),\n map(() => getElementOffset(el)),\n startWith(getElementOffset(el))\n )\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n Observable,\n animationFrameScheduler,\n auditTime,\n fromEvent,\n map,\n merge,\n startWith\n} from \"rxjs\"\n\nimport { ElementOffset } from \"../_\"\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Retrieve element content offset (= scroll offset)\n *\n * @param el - Element\n *\n * @returns Element content offset\n */\nexport function getElementContentOffset(\n el: HTMLElement\n): ElementOffset {\n return {\n x: el.scrollLeft,\n y: el.scrollTop\n }\n}\n\n/* ------------------------------------------------------------------------- */\n\n/**\n * Watch element content offset\n *\n * @param el - Element\n *\n * @returns Element content offset observable\n */\nexport function watchElementContentOffset(\n el: HTMLElement\n): Observable {\n return merge(\n fromEvent(el, \"scroll\"),\n fromEvent(window, \"resize\")\n )\n .pipe(\n auditTime(0, animationFrameScheduler),\n map(() => getElementContentOffset(el)),\n startWith(getElementContentOffset(el))\n )\n}\n", "/**\r\n * A collection of shims that provide minimal functionality of the ES6 collections.\r\n *\r\n * These implementations are not meant to be used outside of the ResizeObserver\r\n * modules as they cover only a limited range of use cases.\r\n */\r\n/* eslint-disable require-jsdoc, valid-jsdoc */\r\nvar MapShim = (function () {\r\n if (typeof Map !== 'undefined') {\r\n return Map;\r\n }\r\n /**\r\n * Returns index in provided array that matches the specified key.\r\n *\r\n * @param {Array} arr\r\n * @param {*} key\r\n * @returns {number}\r\n */\r\n function getIndex(arr, key) {\r\n var result = -1;\r\n arr.some(function (entry, index) {\r\n if (entry[0] === key) {\r\n result = index;\r\n return true;\r\n }\r\n return false;\r\n });\r\n return result;\r\n }\r\n return /** @class */ (function () {\r\n function class_1() {\r\n this.__entries__ = [];\r\n }\r\n Object.defineProperty(class_1.prototype, \"size\", {\r\n /**\r\n * @returns {boolean}\r\n */\r\n get: function () {\r\n return this.__entries__.length;\r\n },\r\n enumerable: true,\r\n configurable: true\r\n });\r\n /**\r\n * @param {*} key\r\n * @returns {*}\r\n */\r\n class_1.prototype.get = function (key) {\r\n var index = getIndex(this.__entries__, key);\r\n var entry = this.__entries__[index];\r\n return entry && entry[1];\r\n };\r\n /**\r\n * @param {*} key\r\n * @param {*} value\r\n * @returns {void}\r\n */\r\n class_1.prototype.set = function (key, value) {\r\n var index = getIndex(this.__entries__, key);\r\n if (~index) {\r\n this.__entries__[index][1] = value;\r\n }\r\n else {\r\n this.__entries__.push([key, value]);\r\n }\r\n };\r\n /**\r\n * @param {*} key\r\n * @returns {void}\r\n */\r\n class_1.prototype.delete = function (key) {\r\n var entries = this.__entries__;\r\n var index = getIndex(entries, key);\r\n if (~index) {\r\n entries.splice(index, 1);\r\n }\r\n };\r\n /**\r\n * @param {*} key\r\n * @returns {void}\r\n */\r\n class_1.prototype.has = function (key) {\r\n return !!~getIndex(this.__entries__, key);\r\n };\r\n /**\r\n * @returns {void}\r\n */\r\n class_1.prototype.clear = function () {\r\n this.__entries__.splice(0);\r\n };\r\n /**\r\n * @param {Function} callback\r\n * @param {*} [ctx=null]\r\n * @returns {void}\r\n */\r\n class_1.prototype.forEach = function (callback, ctx) {\r\n if (ctx === void 0) { ctx = null; }\r\n for (var _i = 0, _a = this.__entries__; _i < _a.length; _i++) {\r\n var entry = _a[_i];\r\n callback.call(ctx, entry[1], entry[0]);\r\n }\r\n };\r\n return class_1;\r\n }());\r\n})();\n\n/**\r\n * Detects whether window and document objects are available in current environment.\r\n */\r\nvar isBrowser = typeof window !== 'undefined' && typeof document !== 'undefined' && window.document === document;\n\n// Returns global object of a current environment.\r\nvar global$1 = (function () {\r\n if (typeof global !== 'undefined' && global.Math === Math) {\r\n return global;\r\n }\r\n if (typeof self !== 'undefined' && self.Math === Math) {\r\n return self;\r\n }\r\n if (typeof window !== 'undefined' && window.Math === Math) {\r\n return window;\r\n }\r\n // eslint-disable-next-line no-new-func\r\n return Function('return this')();\r\n})();\n\n/**\r\n * A shim for the requestAnimationFrame which falls back to the setTimeout if\r\n * first one is not supported.\r\n *\r\n * @returns {number} Requests' identifier.\r\n */\r\nvar requestAnimationFrame$1 = (function () {\r\n if (typeof requestAnimationFrame === 'function') {\r\n // It's required to use a bounded function because IE sometimes throws\r\n // an \"Invalid calling object\" error if rAF is invoked without the global\r\n // object on the left hand side.\r\n return requestAnimationFrame.bind(global$1);\r\n }\r\n return function (callback) { return setTimeout(function () { return callback(Date.now()); }, 1000 / 60); };\r\n})();\n\n// Defines minimum timeout before adding a trailing call.\r\nvar trailingTimeout = 2;\r\n/**\r\n * Creates a wrapper function which ensures that provided callback will be\r\n * invoked only once during the specified delay period.\r\n *\r\n * @param {Function} callback - Function to be invoked after the delay period.\r\n * @param {number} delay - Delay after which to invoke callback.\r\n * @returns {Function}\r\n */\r\nfunction throttle (callback, delay) {\r\n var leadingCall = false, trailingCall = false, lastCallTime = 0;\r\n /**\r\n * Invokes the original callback function and schedules new invocation if\r\n * the \"proxy\" was called during current request.\r\n *\r\n * @returns {void}\r\n */\r\n function resolvePending() {\r\n if (leadingCall) {\r\n leadingCall = false;\r\n callback();\r\n }\r\n if (trailingCall) {\r\n proxy();\r\n }\r\n }\r\n /**\r\n * Callback invoked after the specified delay. It will further postpone\r\n * invocation of the original function delegating it to the\r\n * requestAnimationFrame.\r\n *\r\n * @returns {void}\r\n */\r\n function timeoutCallback() {\r\n requestAnimationFrame$1(resolvePending);\r\n }\r\n /**\r\n * Schedules invocation of the original function.\r\n *\r\n * @returns {void}\r\n */\r\n function proxy() {\r\n var timeStamp = Date.now();\r\n if (leadingCall) {\r\n // Reject immediately following calls.\r\n if (timeStamp - lastCallTime < trailingTimeout) {\r\n return;\r\n }\r\n // Schedule new call to be in invoked when the pending one is resolved.\r\n // This is important for \"transitions\" which never actually start\r\n // immediately so there is a chance that we might miss one if change\r\n // happens amids the pending invocation.\r\n trailingCall = true;\r\n }\r\n else {\r\n leadingCall = true;\r\n trailingCall = false;\r\n setTimeout(timeoutCallback, delay);\r\n }\r\n lastCallTime = timeStamp;\r\n }\r\n return proxy;\r\n}\n\n// Minimum delay before invoking the update of observers.\r\nvar REFRESH_DELAY = 20;\r\n// A list of substrings of CSS properties used to find transition events that\r\n// might affect dimensions of observed elements.\r\nvar transitionKeys = ['top', 'right', 'bottom', 'left', 'width', 'height', 'size', 'weight'];\r\n// Check if MutationObserver is available.\r\nvar mutationObserverSupported = typeof MutationObserver !== 'undefined';\r\n/**\r\n * Singleton controller class which handles updates of ResizeObserver instances.\r\n */\r\nvar ResizeObserverController = /** @class */ (function () {\r\n /**\r\n * Creates a new instance of ResizeObserverController.\r\n *\r\n * @private\r\n */\r\n function ResizeObserverController() {\r\n /**\r\n * Indicates whether DOM listeners have been added.\r\n *\r\n * @private {boolean}\r\n */\r\n this.connected_ = false;\r\n /**\r\n * Tells that controller has subscribed for Mutation Events.\r\n *\r\n * @private {boolean}\r\n */\r\n this.mutationEventsAdded_ = false;\r\n /**\r\n * Keeps reference to the instance of MutationObserver.\r\n *\r\n * @private {MutationObserver}\r\n */\r\n this.mutationsObserver_ = null;\r\n /**\r\n * A list of connected observers.\r\n *\r\n * @private {Array}\r\n */\r\n this.observers_ = [];\r\n this.onTransitionEnd_ = this.onTransitionEnd_.bind(this);\r\n this.refresh = throttle(this.refresh.bind(this), REFRESH_DELAY);\r\n }\r\n /**\r\n * Adds observer to observers list.\r\n *\r\n * @param {ResizeObserverSPI} observer - Observer to be added.\r\n * @returns {void}\r\n */\r\n ResizeObserverController.prototype.addObserver = function (observer) {\r\n if (!~this.observers_.indexOf(observer)) {\r\n this.observers_.push(observer);\r\n }\r\n // Add listeners if they haven't been added yet.\r\n if (!this.connected_) {\r\n this.connect_();\r\n }\r\n };\r\n /**\r\n * Removes observer from observers list.\r\n *\r\n * @param {ResizeObserverSPI} observer - Observer to be removed.\r\n * @returns {void}\r\n */\r\n ResizeObserverController.prototype.removeObserver = function (observer) {\r\n var observers = this.observers_;\r\n var index = observers.indexOf(observer);\r\n // Remove observer if it's present in registry.\r\n if (~index) {\r\n observers.splice(index, 1);\r\n }\r\n // Remove listeners if controller has no connected observers.\r\n if (!observers.length && this.connected_) {\r\n this.disconnect_();\r\n }\r\n };\r\n /**\r\n * Invokes the update of observers. It will continue running updates insofar\r\n * it detects changes.\r\n *\r\n * @returns {void}\r\n */\r\n ResizeObserverController.prototype.refresh = function () {\r\n var changesDetected = this.updateObservers_();\r\n // Continue running updates if changes have been detected as there might\r\n // be future ones caused by CSS transitions.\r\n if (changesDetected) {\r\n this.refresh();\r\n }\r\n };\r\n /**\r\n * Updates every observer from observers list and notifies them of queued\r\n * entries.\r\n *\r\n * @private\r\n * @returns {boolean} Returns \"true\" if any observer has detected changes in\r\n * dimensions of it's elements.\r\n */\r\n ResizeObserverController.prototype.updateObservers_ = function () {\r\n // Collect observers that have active observations.\r\n var activeObservers = this.observers_.filter(function (observer) {\r\n return observer.gatherActive(), observer.hasActive();\r\n });\r\n // Deliver notifications in a separate cycle in order to avoid any\r\n // collisions between observers, e.g. when multiple instances of\r\n // ResizeObserver are tracking the same element and the callback of one\r\n // of them changes content dimensions of the observed target. Sometimes\r\n // this may result in notifications being blocked for the rest of observers.\r\n activeObservers.forEach(function (observer) { return observer.broadcastActive(); });\r\n return activeObservers.length > 0;\r\n };\r\n /**\r\n * Initializes DOM listeners.\r\n *\r\n * @private\r\n * @returns {void}\r\n */\r\n ResizeObserverController.prototype.connect_ = function () {\r\n // Do nothing if running in a non-browser environment or if listeners\r\n // have been already added.\r\n if (!isBrowser || this.connected_) {\r\n return;\r\n }\r\n // Subscription to the \"Transitionend\" event is used as a workaround for\r\n // delayed transitions. This way it's possible to capture at least the\r\n // final state of an element.\r\n document.addEventListener('transitionend', this.onTransitionEnd_);\r\n window.addEventListener('resize', this.refresh);\r\n if (mutationObserverSupported) {\r\n this.mutationsObserver_ = new MutationObserver(this.refresh);\r\n this.mutationsObserver_.observe(document, {\r\n attributes: true,\r\n childList: true,\r\n characterData: true,\r\n subtree: true\r\n });\r\n }\r\n else {\r\n document.addEventListener('DOMSubtreeModified', this.refresh);\r\n this.mutationEventsAdded_ = true;\r\n }\r\n this.connected_ = true;\r\n };\r\n /**\r\n * Removes DOM listeners.\r\n *\r\n * @private\r\n * @returns {void}\r\n */\r\n ResizeObserverController.prototype.disconnect_ = function () {\r\n // Do nothing if running in a non-browser environment or if listeners\r\n // have been already removed.\r\n if (!isBrowser || !this.connected_) {\r\n return;\r\n }\r\n document.removeEventListener('transitionend', this.onTransitionEnd_);\r\n window.removeEventListener('resize', this.refresh);\r\n if (this.mutationsObserver_) {\r\n this.mutationsObserver_.disconnect();\r\n }\r\n if (this.mutationEventsAdded_) {\r\n document.removeEventListener('DOMSubtreeModified', this.refresh);\r\n }\r\n this.mutationsObserver_ = null;\r\n this.mutationEventsAdded_ = false;\r\n this.connected_ = false;\r\n };\r\n /**\r\n * \"Transitionend\" event handler.\r\n *\r\n * @private\r\n * @param {TransitionEvent} event\r\n * @returns {void}\r\n */\r\n ResizeObserverController.prototype.onTransitionEnd_ = function (_a) {\r\n var _b = _a.propertyName, propertyName = _b === void 0 ? '' : _b;\r\n // Detect whether transition may affect dimensions of an element.\r\n var isReflowProperty = transitionKeys.some(function (key) {\r\n return !!~propertyName.indexOf(key);\r\n });\r\n if (isReflowProperty) {\r\n this.refresh();\r\n }\r\n };\r\n /**\r\n * Returns instance of the ResizeObserverController.\r\n *\r\n * @returns {ResizeObserverController}\r\n */\r\n ResizeObserverController.getInstance = function () {\r\n if (!this.instance_) {\r\n this.instance_ = new ResizeObserverController();\r\n }\r\n return this.instance_;\r\n };\r\n /**\r\n * Holds reference to the controller's instance.\r\n *\r\n * @private {ResizeObserverController}\r\n */\r\n ResizeObserverController.instance_ = null;\r\n return ResizeObserverController;\r\n}());\n\n/**\r\n * Defines non-writable/enumerable properties of the provided target object.\r\n *\r\n * @param {Object} target - Object for which to define properties.\r\n * @param {Object} props - Properties to be defined.\r\n * @returns {Object} Target object.\r\n */\r\nvar defineConfigurable = (function (target, props) {\r\n for (var _i = 0, _a = Object.keys(props); _i < _a.length; _i++) {\r\n var key = _a[_i];\r\n Object.defineProperty(target, key, {\r\n value: props[key],\r\n enumerable: false,\r\n writable: false,\r\n configurable: true\r\n });\r\n }\r\n return target;\r\n});\n\n/**\r\n * Returns the global object associated with provided element.\r\n *\r\n * @param {Object} target\r\n * @returns {Object}\r\n */\r\nvar getWindowOf = (function (target) {\r\n // Assume that the element is an instance of Node, which means that it\r\n // has the \"ownerDocument\" property from which we can retrieve a\r\n // corresponding global object.\r\n var ownerGlobal = target && target.ownerDocument && target.ownerDocument.defaultView;\r\n // Return the local global object if it's not possible extract one from\r\n // provided element.\r\n return ownerGlobal || global$1;\r\n});\n\n// Placeholder of an empty content rectangle.\r\nvar emptyRect = createRectInit(0, 0, 0, 0);\r\n/**\r\n * Converts provided string to a number.\r\n *\r\n * @param {number|string} value\r\n * @returns {number}\r\n */\r\nfunction toFloat(value) {\r\n return parseFloat(value) || 0;\r\n}\r\n/**\r\n * Extracts borders size from provided styles.\r\n *\r\n * @param {CSSStyleDeclaration} styles\r\n * @param {...string} positions - Borders positions (top, right, ...)\r\n * @returns {number}\r\n */\r\nfunction getBordersSize(styles) {\r\n var positions = [];\r\n for (var _i = 1; _i < arguments.length; _i++) {\r\n positions[_i - 1] = arguments[_i];\r\n }\r\n return positions.reduce(function (size, position) {\r\n var value = styles['border-' + position + '-width'];\r\n return size + toFloat(value);\r\n }, 0);\r\n}\r\n/**\r\n * Extracts paddings sizes from provided styles.\r\n *\r\n * @param {CSSStyleDeclaration} styles\r\n * @returns {Object} Paddings box.\r\n */\r\nfunction getPaddings(styles) {\r\n var positions = ['top', 'right', 'bottom', 'left'];\r\n var paddings = {};\r\n for (var _i = 0, positions_1 = positions; _i < positions_1.length; _i++) {\r\n var position = positions_1[_i];\r\n var value = styles['padding-' + position];\r\n paddings[position] = toFloat(value);\r\n }\r\n return paddings;\r\n}\r\n/**\r\n * Calculates content rectangle of provided SVG element.\r\n *\r\n * @param {SVGGraphicsElement} target - Element content rectangle of which needs\r\n * to be calculated.\r\n * @returns {DOMRectInit}\r\n */\r\nfunction getSVGContentRect(target) {\r\n var bbox = target.getBBox();\r\n return createRectInit(0, 0, bbox.width, bbox.height);\r\n}\r\n/**\r\n * Calculates content rectangle of provided HTMLElement.\r\n *\r\n * @param {HTMLElement} target - Element for which to calculate the content rectangle.\r\n * @returns {DOMRectInit}\r\n */\r\nfunction getHTMLElementContentRect(target) {\r\n // Client width & height properties can't be\r\n // used exclusively as they provide rounded values.\r\n var clientWidth = target.clientWidth, clientHeight = target.clientHeight;\r\n // By this condition we can catch all non-replaced inline, hidden and\r\n // detached elements. Though elements with width & height properties less\r\n // than 0.5 will be discarded as well.\r\n //\r\n // Without it we would need to implement separate methods for each of\r\n // those cases and it's not possible to perform a precise and performance\r\n // effective test for hidden elements. E.g. even jQuery's ':visible' filter\r\n // gives wrong results for elements with width & height less than 0.5.\r\n if (!clientWidth && !clientHeight) {\r\n return emptyRect;\r\n }\r\n var styles = getWindowOf(target).getComputedStyle(target);\r\n var paddings = getPaddings(styles);\r\n var horizPad = paddings.left + paddings.right;\r\n var vertPad = paddings.top + paddings.bottom;\r\n // Computed styles of width & height are being used because they are the\r\n // only dimensions available to JS that contain non-rounded values. It could\r\n // be possible to utilize the getBoundingClientRect if only it's data wasn't\r\n // affected by CSS transformations let alone paddings, borders and scroll bars.\r\n var width = toFloat(styles.width), height = toFloat(styles.height);\r\n // Width & height include paddings and borders when the 'border-box' box\r\n // model is applied (except for IE).\r\n if (styles.boxSizing === 'border-box') {\r\n // Following conditions are required to handle Internet Explorer which\r\n // doesn't include paddings and borders to computed CSS dimensions.\r\n //\r\n // We can say that if CSS dimensions + paddings are equal to the \"client\"\r\n // properties then it's either IE, and thus we don't need to subtract\r\n // anything, or an element merely doesn't have paddings/borders styles.\r\n if (Math.round(width + horizPad) !== clientWidth) {\r\n width -= getBordersSize(styles, 'left', 'right') + horizPad;\r\n }\r\n if (Math.round(height + vertPad) !== clientHeight) {\r\n height -= getBordersSize(styles, 'top', 'bottom') + vertPad;\r\n }\r\n }\r\n // Following steps can't be applied to the document's root element as its\r\n // client[Width/Height] properties represent viewport area of the window.\r\n // Besides, it's as well not necessary as the itself neither has\r\n // rendered scroll bars nor it can be clipped.\r\n if (!isDocumentElement(target)) {\r\n // In some browsers (only in Firefox, actually) CSS width & height\r\n // include scroll bars size which can be removed at this step as scroll\r\n // bars are the only difference between rounded dimensions + paddings\r\n // and \"client\" properties, though that is not always true in Chrome.\r\n var vertScrollbar = Math.round(width + horizPad) - clientWidth;\r\n var horizScrollbar = Math.round(height + vertPad) - clientHeight;\r\n // Chrome has a rather weird rounding of \"client\" properties.\r\n // E.g. for an element with content width of 314.2px it sometimes gives\r\n // the client width of 315px and for the width of 314.7px it may give\r\n // 314px. And it doesn't happen all the time. So just ignore this delta\r\n // as a non-relevant.\r\n if (Math.abs(vertScrollbar) !== 1) {\r\n width -= vertScrollbar;\r\n }\r\n if (Math.abs(horizScrollbar) !== 1) {\r\n height -= horizScrollbar;\r\n }\r\n }\r\n return createRectInit(paddings.left, paddings.top, width, height);\r\n}\r\n/**\r\n * Checks whether provided element is an instance of the SVGGraphicsElement.\r\n *\r\n * @param {Element} target - Element to be checked.\r\n * @returns {boolean}\r\n */\r\nvar isSVGGraphicsElement = (function () {\r\n // Some browsers, namely IE and Edge, don't have the SVGGraphicsElement\r\n // interface.\r\n if (typeof SVGGraphicsElement !== 'undefined') {\r\n return function (target) { return target instanceof getWindowOf(target).SVGGraphicsElement; };\r\n }\r\n // If it's so, then check that element is at least an instance of the\r\n // SVGElement and that it has the \"getBBox\" method.\r\n // eslint-disable-next-line no-extra-parens\r\n return function (target) { return (target instanceof getWindowOf(target).SVGElement &&\r\n typeof target.getBBox === 'function'); };\r\n})();\r\n/**\r\n * Checks whether provided element is a document element ().\r\n *\r\n * @param {Element} target - Element to be checked.\r\n * @returns {boolean}\r\n */\r\nfunction isDocumentElement(target) {\r\n return target === getWindowOf(target).document.documentElement;\r\n}\r\n/**\r\n * Calculates an appropriate content rectangle for provided html or svg element.\r\n *\r\n * @param {Element} target - Element content rectangle of which needs to be calculated.\r\n * @returns {DOMRectInit}\r\n */\r\nfunction getContentRect(target) {\r\n if (!isBrowser) {\r\n return emptyRect;\r\n }\r\n if (isSVGGraphicsElement(target)) {\r\n return getSVGContentRect(target);\r\n }\r\n return getHTMLElementContentRect(target);\r\n}\r\n/**\r\n * Creates rectangle with an interface of the DOMRectReadOnly.\r\n * Spec: https://drafts.fxtf.org/geometry/#domrectreadonly\r\n *\r\n * @param {DOMRectInit} rectInit - Object with rectangle's x/y coordinates and dimensions.\r\n * @returns {DOMRectReadOnly}\r\n */\r\nfunction createReadOnlyRect(_a) {\r\n var x = _a.x, y = _a.y, width = _a.width, height = _a.height;\r\n // If DOMRectReadOnly is available use it as a prototype for the rectangle.\r\n var Constr = typeof DOMRectReadOnly !== 'undefined' ? DOMRectReadOnly : Object;\r\n var rect = Object.create(Constr.prototype);\r\n // Rectangle's properties are not writable and non-enumerable.\r\n defineConfigurable(rect, {\r\n x: x, y: y, width: width, height: height,\r\n top: y,\r\n right: x + width,\r\n bottom: height + y,\r\n left: x\r\n });\r\n return rect;\r\n}\r\n/**\r\n * Creates DOMRectInit object based on the provided dimensions and the x/y coordinates.\r\n * Spec: https://drafts.fxtf.org/geometry/#dictdef-domrectinit\r\n *\r\n * @param {number} x - X coordinate.\r\n * @param {number} y - Y coordinate.\r\n * @param {number} width - Rectangle's width.\r\n * @param {number} height - Rectangle's height.\r\n * @returns {DOMRectInit}\r\n */\r\nfunction createRectInit(x, y, width, height) {\r\n return { x: x, y: y, width: width, height: height };\r\n}\n\n/**\r\n * Class that is responsible for computations of the content rectangle of\r\n * provided DOM element and for keeping track of it's changes.\r\n */\r\nvar ResizeObservation = /** @class */ (function () {\r\n /**\r\n * Creates an instance of ResizeObservation.\r\n *\r\n * @param {Element} target - Element to be observed.\r\n */\r\n function ResizeObservation(target) {\r\n /**\r\n * Broadcasted width of content rectangle.\r\n *\r\n * @type {number}\r\n */\r\n this.broadcastWidth = 0;\r\n /**\r\n * Broadcasted height of content rectangle.\r\n *\r\n * @type {number}\r\n */\r\n this.broadcastHeight = 0;\r\n /**\r\n * Reference to the last observed content rectangle.\r\n *\r\n * @private {DOMRectInit}\r\n */\r\n this.contentRect_ = createRectInit(0, 0, 0, 0);\r\n this.target = target;\r\n }\r\n /**\r\n * Updates content rectangle and tells whether it's width or height properties\r\n * have changed since the last broadcast.\r\n *\r\n * @returns {boolean}\r\n */\r\n ResizeObservation.prototype.isActive = function () {\r\n var rect = getContentRect(this.target);\r\n this.contentRect_ = rect;\r\n return (rect.width !== this.broadcastWidth ||\r\n rect.height !== this.broadcastHeight);\r\n };\r\n /**\r\n * Updates 'broadcastWidth' and 'broadcastHeight' properties with a data\r\n * from the corresponding properties of the last observed content rectangle.\r\n *\r\n * @returns {DOMRectInit} Last observed content rectangle.\r\n */\r\n ResizeObservation.prototype.broadcastRect = function () {\r\n var rect = this.contentRect_;\r\n this.broadcastWidth = rect.width;\r\n this.broadcastHeight = rect.height;\r\n return rect;\r\n };\r\n return ResizeObservation;\r\n}());\n\nvar ResizeObserverEntry = /** @class */ (function () {\r\n /**\r\n * Creates an instance of ResizeObserverEntry.\r\n *\r\n * @param {Element} target - Element that is being observed.\r\n * @param {DOMRectInit} rectInit - Data of the element's content rectangle.\r\n */\r\n function ResizeObserverEntry(target, rectInit) {\r\n var contentRect = createReadOnlyRect(rectInit);\r\n // According to the specification following properties are not writable\r\n // and are also not enumerable in the native implementation.\r\n //\r\n // Property accessors are not being used as they'd require to define a\r\n // private WeakMap storage which may cause memory leaks in browsers that\r\n // don't support this type of collections.\r\n defineConfigurable(this, { target: target, contentRect: contentRect });\r\n }\r\n return ResizeObserverEntry;\r\n}());\n\nvar ResizeObserverSPI = /** @class */ (function () {\r\n /**\r\n * Creates a new instance of ResizeObserver.\r\n *\r\n * @param {ResizeObserverCallback} callback - Callback function that is invoked\r\n * when one of the observed elements changes it's content dimensions.\r\n * @param {ResizeObserverController} controller - Controller instance which\r\n * is responsible for the updates of observer.\r\n * @param {ResizeObserver} callbackCtx - Reference to the public\r\n * ResizeObserver instance which will be passed to callback function.\r\n */\r\n function ResizeObserverSPI(callback, controller, callbackCtx) {\r\n /**\r\n * Collection of resize observations that have detected changes in dimensions\r\n * of elements.\r\n *\r\n * @private {Array}\r\n */\r\n this.activeObservations_ = [];\r\n /**\r\n * Registry of the ResizeObservation instances.\r\n *\r\n * @private {Map}\r\n */\r\n this.observations_ = new MapShim();\r\n if (typeof callback !== 'function') {\r\n throw new TypeError('The callback provided as parameter 1 is not a function.');\r\n }\r\n this.callback_ = callback;\r\n this.controller_ = controller;\r\n this.callbackCtx_ = callbackCtx;\r\n }\r\n /**\r\n * Starts observing provided element.\r\n *\r\n * @param {Element} target - Element to be observed.\r\n * @returns {void}\r\n */\r\n ResizeObserverSPI.prototype.observe = function (target) {\r\n if (!arguments.length) {\r\n throw new TypeError('1 argument required, but only 0 present.');\r\n }\r\n // Do nothing if current environment doesn't have the Element interface.\r\n if (typeof Element === 'undefined' || !(Element instanceof Object)) {\r\n return;\r\n }\r\n if (!(target instanceof getWindowOf(target).Element)) {\r\n throw new TypeError('parameter 1 is not of type \"Element\".');\r\n }\r\n var observations = this.observations_;\r\n // Do nothing if element is already being observed.\r\n if (observations.has(target)) {\r\n return;\r\n }\r\n observations.set(target, new ResizeObservation(target));\r\n this.controller_.addObserver(this);\r\n // Force the update of observations.\r\n this.controller_.refresh();\r\n };\r\n /**\r\n * Stops observing provided element.\r\n *\r\n * @param {Element} target - Element to stop observing.\r\n * @returns {void}\r\n */\r\n ResizeObserverSPI.prototype.unobserve = function (target) {\r\n if (!arguments.length) {\r\n throw new TypeError('1 argument required, but only 0 present.');\r\n }\r\n // Do nothing if current environment doesn't have the Element interface.\r\n if (typeof Element === 'undefined' || !(Element instanceof Object)) {\r\n return;\r\n }\r\n if (!(target instanceof getWindowOf(target).Element)) {\r\n throw new TypeError('parameter 1 is not of type \"Element\".');\r\n }\r\n var observations = this.observations_;\r\n // Do nothing if element is not being observed.\r\n if (!observations.has(target)) {\r\n return;\r\n }\r\n observations.delete(target);\r\n if (!observations.size) {\r\n this.controller_.removeObserver(this);\r\n }\r\n };\r\n /**\r\n * Stops observing all elements.\r\n *\r\n * @returns {void}\r\n */\r\n ResizeObserverSPI.prototype.disconnect = function () {\r\n this.clearActive();\r\n this.observations_.clear();\r\n this.controller_.removeObserver(this);\r\n };\r\n /**\r\n * Collects observation instances the associated element of which has changed\r\n * it's content rectangle.\r\n *\r\n * @returns {void}\r\n */\r\n ResizeObserverSPI.prototype.gatherActive = function () {\r\n var _this = this;\r\n this.clearActive();\r\n this.observations_.forEach(function (observation) {\r\n if (observation.isActive()) {\r\n _this.activeObservations_.push(observation);\r\n }\r\n });\r\n };\r\n /**\r\n * Invokes initial callback function with a list of ResizeObserverEntry\r\n * instances collected from active resize observations.\r\n *\r\n * @returns {void}\r\n */\r\n ResizeObserverSPI.prototype.broadcastActive = function () {\r\n // Do nothing if observer doesn't have active observations.\r\n if (!this.hasActive()) {\r\n return;\r\n }\r\n var ctx = this.callbackCtx_;\r\n // Create ResizeObserverEntry instance for every active observation.\r\n var entries = this.activeObservations_.map(function (observation) {\r\n return new ResizeObserverEntry(observation.target, observation.broadcastRect());\r\n });\r\n this.callback_.call(ctx, entries, ctx);\r\n this.clearActive();\r\n };\r\n /**\r\n * Clears the collection of active observations.\r\n *\r\n * @returns {void}\r\n */\r\n ResizeObserverSPI.prototype.clearActive = function () {\r\n this.activeObservations_.splice(0);\r\n };\r\n /**\r\n * Tells whether observer has active observations.\r\n *\r\n * @returns {boolean}\r\n */\r\n ResizeObserverSPI.prototype.hasActive = function () {\r\n return this.activeObservations_.length > 0;\r\n };\r\n return ResizeObserverSPI;\r\n}());\n\n// Registry of internal observers. If WeakMap is not available use current shim\r\n// for the Map collection as it has all required methods and because WeakMap\r\n// can't be fully polyfilled anyway.\r\nvar observers = typeof WeakMap !== 'undefined' ? new WeakMap() : new MapShim();\r\n/**\r\n * ResizeObserver API. Encapsulates the ResizeObserver SPI implementation\r\n * exposing only those methods and properties that are defined in the spec.\r\n */\r\nvar ResizeObserver = /** @class */ (function () {\r\n /**\r\n * Creates a new instance of ResizeObserver.\r\n *\r\n * @param {ResizeObserverCallback} callback - Callback that is invoked when\r\n * dimensions of the observed elements change.\r\n */\r\n function ResizeObserver(callback) {\r\n if (!(this instanceof ResizeObserver)) {\r\n throw new TypeError('Cannot call a class as a function.');\r\n }\r\n if (!arguments.length) {\r\n throw new TypeError('1 argument required, but only 0 present.');\r\n }\r\n var controller = ResizeObserverController.getInstance();\r\n var observer = new ResizeObserverSPI(callback, controller, this);\r\n observers.set(this, observer);\r\n }\r\n return ResizeObserver;\r\n}());\r\n// Expose public methods of ResizeObserver.\r\n[\r\n 'observe',\r\n 'unobserve',\r\n 'disconnect'\r\n].forEach(function (method) {\r\n ResizeObserver.prototype[method] = function () {\r\n var _a;\r\n return (_a = observers.get(this))[method].apply(_a, arguments);\r\n };\r\n});\n\nvar index = (function () {\r\n // Export existing implementation if available.\r\n if (typeof global$1.ResizeObserver !== 'undefined') {\r\n return global$1.ResizeObserver;\r\n }\r\n return ResizeObserver;\r\n})();\n\nexport default index;\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport ResizeObserver from \"resize-observer-polyfill\"\nimport {\n NEVER,\n Observable,\n Subject,\n defer,\n filter,\n finalize,\n map,\n merge,\n of,\n shareReplay,\n startWith,\n switchMap,\n tap\n} from \"rxjs\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Element offset\n */\nexport interface ElementSize {\n width: number /* Element width */\n height: number /* Element height */\n}\n\n/* ----------------------------------------------------------------------------\n * Data\n * ------------------------------------------------------------------------- */\n\n/**\n * Resize observer entry subject\n */\nconst entry$ = new Subject()\n\n/**\n * Resize observer observable\n *\n * This observable will create a `ResizeObserver` on the first subscription\n * and will automatically terminate it when there are no more subscribers.\n * It's quite important to centralize observation in a single `ResizeObserver`,\n * as the performance difference can be quite dramatic, as the link shows.\n *\n * @see https://bit.ly/3iIYfEm - Google Groups on performance\n */\nconst observer$ = defer(() => of(\n new ResizeObserver(entries => {\n for (const entry of entries)\n entry$.next(entry)\n })\n))\n .pipe(\n switchMap(observer => merge(NEVER, of(observer))\n .pipe(\n finalize(() => observer.disconnect())\n )\n ),\n shareReplay(1)\n )\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Retrieve element size\n *\n * @param el - Element\n *\n * @returns Element size\n */\nexport function getElementSize(\n el: HTMLElement\n): ElementSize {\n return {\n width: el.offsetWidth,\n height: el.offsetHeight\n }\n}\n\n/* ------------------------------------------------------------------------- */\n\n/**\n * Watch element size\n *\n * This function returns an observable that subscribes to a single internal\n * instance of `ResizeObserver` upon subscription, and emit resize events until\n * termination. Note that this function should not be called with the same\n * element twice, as the first unsubscription will terminate observation.\n *\n * Sadly, we can't use the `DOMRect` objects returned by the observer, because\n * we need the emitted values to be consistent with `getElementSize`, which will\n * return the used values (rounded) and not actual values (unrounded). Thus, we\n * use the `offset*` properties. See the linked GitHub issue.\n *\n * @see https://bit.ly/3m0k3he - GitHub issue\n *\n * @param el - Element\n *\n * @returns Element size observable\n */\nexport function watchElementSize(\n el: HTMLElement\n): Observable {\n return observer$\n .pipe(\n tap(observer => observer.observe(el)),\n switchMap(observer => entry$\n .pipe(\n filter(({ target }) => target === el),\n finalize(() => observer.unobserve(el)),\n map(() => getElementSize(el))\n )\n ),\n startWith(getElementSize(el))\n )\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport { ElementSize } from \"../_\"\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Retrieve element content size (= scroll width and height)\n *\n * @param el - Element\n *\n * @returns Element content size\n */\nexport function getElementContentSize(\n el: HTMLElement\n): ElementSize {\n return {\n width: el.scrollWidth,\n height: el.scrollHeight\n }\n}\n\n/**\n * Retrieve the overflowing container of an element, if any\n *\n * @param el - Element\n *\n * @returns Overflowing container or nothing\n */\nexport function getElementContainer(\n el: HTMLElement\n): HTMLElement | undefined {\n let parent = el.parentElement\n while (parent)\n if (\n el.scrollWidth <= parent.scrollWidth &&\n el.scrollHeight <= parent.scrollHeight\n )\n parent = (el = parent).parentElement\n else\n break\n\n /* Return overflowing container */\n return parent ? el : undefined\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n NEVER,\n Observable,\n Subject,\n defer,\n distinctUntilChanged,\n filter,\n finalize,\n map,\n merge,\n of,\n shareReplay,\n switchMap,\n tap\n} from \"rxjs\"\n\nimport {\n getElementContentSize,\n getElementSize,\n watchElementContentOffset\n} from \"~/browser\"\n\n/* ----------------------------------------------------------------------------\n * Data\n * ------------------------------------------------------------------------- */\n\n/**\n * Intersection observer entry subject\n */\nconst entry$ = new Subject()\n\n/**\n * Intersection observer observable\n *\n * This observable will create an `IntersectionObserver` on first subscription\n * and will automatically terminate it when there are no more subscribers.\n *\n * @see https://bit.ly/3iIYfEm - Google Groups on performance\n */\nconst observer$ = defer(() => of(\n new IntersectionObserver(entries => {\n for (const entry of entries)\n entry$.next(entry)\n }, {\n threshold: 0\n })\n))\n .pipe(\n switchMap(observer => merge(NEVER, of(observer))\n .pipe(\n finalize(() => observer.disconnect())\n )\n ),\n shareReplay(1)\n )\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Watch element visibility\n *\n * @param el - Element\n *\n * @returns Element visibility observable\n */\nexport function watchElementVisibility(\n el: HTMLElement\n): Observable {\n return observer$\n .pipe(\n tap(observer => observer.observe(el)),\n switchMap(observer => entry$\n .pipe(\n filter(({ target }) => target === el),\n finalize(() => observer.unobserve(el)),\n map(({ isIntersecting }) => isIntersecting)\n )\n )\n )\n}\n\n/**\n * Watch element boundary\n *\n * This function returns an observable which emits whether the bottom content\n * boundary (= scroll offset) of an element is within a certain threshold.\n *\n * @param el - Element\n * @param threshold - Threshold\n *\n * @returns Element boundary observable\n */\nexport function watchElementBoundary(\n el: HTMLElement, threshold = 16\n): Observable {\n return watchElementContentOffset(el)\n .pipe(\n map(({ y }) => {\n const visible = getElementSize(el)\n const content = getElementContentSize(el)\n return y >= (\n content.height - visible.height - threshold\n )\n }),\n distinctUntilChanged()\n )\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n Observable,\n fromEvent,\n map,\n startWith\n} from \"rxjs\"\n\nimport { getElement } from \"../element\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Toggle\n */\nexport type Toggle =\n | \"drawer\" /* Toggle for drawer */\n | \"search\" /* Toggle for search */\n\n/* ----------------------------------------------------------------------------\n * Data\n * ------------------------------------------------------------------------- */\n\n/**\n * Toggle map\n */\nconst toggles: Record = {\n drawer: getElement(\"[data-md-toggle=drawer]\"),\n search: getElement(\"[data-md-toggle=search]\")\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Retrieve the value of a toggle\n *\n * @param name - Toggle\n *\n * @returns Toggle value\n */\nexport function getToggle(name: Toggle): boolean {\n return toggles[name].checked\n}\n\n/**\n * Set toggle\n *\n * Simulating a click event seems to be the most cross-browser compatible way\n * of changing the value while also emitting a `change` event. Before, Material\n * used `CustomEvent` to programmatically change the value of a toggle, but this\n * is a much simpler and cleaner solution which doesn't require a polyfill.\n *\n * @param name - Toggle\n * @param value - Toggle value\n */\nexport function setToggle(name: Toggle, value: boolean): void {\n if (toggles[name].checked !== value)\n toggles[name].click()\n}\n\n/* ------------------------------------------------------------------------- */\n\n/**\n * Watch toggle\n *\n * @param name - Toggle\n *\n * @returns Toggle value observable\n */\nexport function watchToggle(name: Toggle): Observable {\n const el = toggles[name]\n return fromEvent(el, \"change\")\n .pipe(\n map(() => el.checked),\n startWith(el.checked)\n )\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n Observable,\n filter,\n fromEvent,\n map,\n share\n} from \"rxjs\"\n\nimport { getActiveElement } from \"../element\"\nimport { getToggle } from \"../toggle\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Keyboard mode\n */\nexport type KeyboardMode =\n | \"global\" /* Global */\n | \"search\" /* Search is open */\n\n/* ------------------------------------------------------------------------- */\n\n/**\n * Keyboard\n */\nexport interface Keyboard {\n mode: KeyboardMode /* Keyboard mode */\n type: string /* Key type */\n claim(): void /* Key claim */\n}\n\n/* ----------------------------------------------------------------------------\n * Helper functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Check whether an element may receive keyboard input\n *\n * @param el - Element\n * @param type - Key type\n *\n * @returns Test result\n */\nfunction isSusceptibleToKeyboard(\n el: HTMLElement, type: string\n): boolean {\n switch (el.constructor) {\n\n /* Input elements */\n case HTMLInputElement:\n /* @ts-expect-error - omit unnecessary type cast */\n if (el.type === \"radio\")\n return /^Arrow/.test(type)\n else\n return true\n\n /* Select element and textarea */\n case HTMLSelectElement:\n case HTMLTextAreaElement:\n return true\n\n /* Everything else */\n default:\n return el.isContentEditable\n }\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Watch keyboard\n *\n * @returns Keyboard observable\n */\nexport function watchKeyboard(): Observable {\n return fromEvent(window, \"keydown\")\n .pipe(\n filter(ev => !(ev.metaKey || ev.ctrlKey)),\n map(ev => ({\n mode: getToggle(\"search\") ? \"search\" : \"global\",\n type: ev.key,\n claim() {\n ev.preventDefault()\n ev.stopPropagation()\n }\n } as Keyboard)),\n filter(({ mode, type }) => {\n if (mode === \"global\") {\n const active = getActiveElement()\n if (typeof active !== \"undefined\")\n return !isSusceptibleToKeyboard(active, type)\n }\n return true\n }),\n share()\n )\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport { Subject } from \"rxjs\"\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Retrieve location\n *\n * This function returns a `URL` object (and not `Location`) to normalize the\n * typings across the application. Furthermore, locations need to be tracked\n * without setting them and `Location` is a singleton which represents the\n * current location.\n *\n * @returns URL\n */\nexport function getLocation(): URL {\n return new URL(location.href)\n}\n\n/**\n * Set location\n *\n * @param url - URL to change to\n */\nexport function setLocation(url: URL): void {\n location.href = url.href\n}\n\n/* ------------------------------------------------------------------------- */\n\n/**\n * Watch location\n *\n * @returns Location subject\n */\nexport function watchLocation(): Subject {\n return new Subject()\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport { JSX as JSXInternal } from \"preact\"\n\n/* ----------------------------------------------------------------------------\n * Helper types\n * ------------------------------------------------------------------------- */\n\n/**\n * HTML attributes\n */\ntype Attributes =\n & JSXInternal.HTMLAttributes\n & JSXInternal.SVGAttributes\n & Record\n\n/**\n * Child element\n */\ntype Child =\n | HTMLElement\n | Text\n | string\n | number\n\n/* ----------------------------------------------------------------------------\n * Helper functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Append a child node to an element\n *\n * @param el - Element\n * @param child - Child node(s)\n */\nfunction appendChild(el: HTMLElement, child: Child | Child[]): void {\n\n /* Handle primitive types (including raw HTML) */\n if (typeof child === \"string\" || typeof child === \"number\") {\n el.innerHTML += child.toString()\n\n /* Handle nodes */\n } else if (child instanceof Node) {\n el.appendChild(child)\n\n /* Handle nested children */\n } else if (Array.isArray(child)) {\n for (const node of child)\n appendChild(el, node)\n }\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * JSX factory\n *\n * @template T - Element type\n *\n * @param tag - HTML tag\n * @param attributes - HTML attributes\n * @param children - Child elements\n *\n * @returns Element\n */\nexport function h(\n tag: T, attributes?: Attributes | null, ...children: Child[]\n): HTMLElementTagNameMap[T]\n\nexport function h(\n tag: string, attributes?: Attributes | null, ...children: Child[]\n): T\n\nexport function h(\n tag: string, attributes?: Attributes | null, ...children: Child[]\n): T {\n const el = document.createElement(tag)\n\n /* Set attributes, if any */\n if (attributes)\n for (const attr of Object.keys(attributes)) {\n if (typeof attributes[attr] === \"undefined\")\n continue\n\n /* Set default attribute or boolean */\n if (typeof attributes[attr] !== \"boolean\")\n el.setAttribute(attr, attributes[attr])\n else\n el.setAttribute(attr, \"\")\n }\n\n /* Append child nodes */\n for (const child of children)\n appendChild(el, child)\n\n /* Return element */\n return el as T\n}\n\n/* ----------------------------------------------------------------------------\n * Namespace\n * ------------------------------------------------------------------------- */\n\nexport declare namespace h {\n namespace JSX {\n type Element = HTMLElement\n type IntrinsicElements = JSXInternal.IntrinsicElements\n }\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Truncate a string after the given number of characters\n *\n * This is not a very reasonable approach, since the summaries kind of suck.\n * It would be better to create something more intelligent, highlighting the\n * search occurrences and making a better summary out of it, but this note was\n * written three years ago, so who knows if we'll ever fix it.\n *\n * @param value - Value to be truncated\n * @param n - Number of characters\n *\n * @returns Truncated value\n */\nexport function truncate(value: string, n: number): string {\n let i = n\n if (value.length > i) {\n while (value[i] !== \" \" && --i > 0) { /* keep eating */ }\n return `${value.substring(0, i)}...`\n }\n return value\n}\n\n/**\n * Round a number for display with repository facts\n *\n * This is a reverse-engineered version of GitHub's weird rounding algorithm\n * for stars, forks and all other numbers. While all numbers below `1,000` are\n * returned as-is, bigger numbers are converted to fixed numbers:\n *\n * - `1,049` => `1k`\n * - `1,050` => `1.1k`\n * - `1,949` => `1.9k`\n * - `1,950` => `2k`\n *\n * @param value - Original value\n *\n * @returns Rounded value\n */\nexport function round(value: number): string {\n if (value > 999) {\n const digits = +((value - 950) % 1000 > 99)\n return `${((value + 0.000001) / 1000).toFixed(digits)}k`\n } else {\n return value.toString()\n }\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n Observable,\n filter,\n fromEvent,\n map,\n shareReplay,\n startWith\n} from \"rxjs\"\n\nimport { getOptionalElement } from \"~/browser\"\nimport { h } from \"~/utilities\"\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Retrieve location hash\n *\n * @returns Location hash\n */\nexport function getLocationHash(): string {\n return location.hash.substring(1)\n}\n\n/**\n * Set location hash\n *\n * Setting a new fragment identifier via `location.hash` will have no effect\n * if the value doesn't change. When a new fragment identifier is set, we want\n * the browser to target the respective element at all times, which is why we\n * use this dirty little trick.\n *\n * @param hash - Location hash\n */\nexport function setLocationHash(hash: string): void {\n const el = h(\"a\", { href: hash })\n el.addEventListener(\"click\", ev => ev.stopPropagation())\n el.click()\n}\n\n/* ------------------------------------------------------------------------- */\n\n/**\n * Watch location hash\n *\n * @returns Location hash observable\n */\nexport function watchLocationHash(): Observable {\n return fromEvent(window, \"hashchange\")\n .pipe(\n map(getLocationHash),\n startWith(getLocationHash()),\n filter(hash => hash.length > 0),\n shareReplay(1)\n )\n}\n\n/**\n * Watch location target\n *\n * @returns Location target observable\n */\nexport function watchLocationTarget(): Observable {\n return watchLocationHash()\n .pipe(\n map(id => getOptionalElement(`[id=\"${id}\"]`)!),\n filter(el => typeof el !== \"undefined\")\n )\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n EMPTY,\n Observable,\n fromEvent,\n fromEventPattern,\n map,\n merge,\n startWith,\n switchMap\n} from \"rxjs\"\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Watch media query\n *\n * Note that although `MediaQueryList.addListener` is deprecated we have to\n * use it, because it's the only way to ensure proper downward compatibility.\n *\n * @see https://bit.ly/3dUBH2m - GitHub issue\n *\n * @param query - Media query\n *\n * @returns Media observable\n */\nexport function watchMedia(query: string): Observable {\n const media = matchMedia(query)\n return fromEventPattern(next => (\n media.addListener(() => next(media.matches))\n ))\n .pipe(\n startWith(media.matches)\n )\n}\n\n/**\n * Watch print mode\n *\n * @returns Print observable\n */\nexport function watchPrint(): Observable {\n const media = matchMedia(\"print\")\n return merge(\n fromEvent(window, \"beforeprint\").pipe(map(() => true)),\n fromEvent(window, \"afterprint\").pipe(map(() => false))\n )\n .pipe(\n startWith(media.matches)\n )\n}\n\n/* ------------------------------------------------------------------------- */\n\n/**\n * Toggle an observable with a media observable\n *\n * @template T - Data type\n *\n * @param query$ - Media observable\n * @param factory - Observable factory\n *\n * @returns Toggled observable\n */\nexport function at(\n query$: Observable, factory: () => Observable\n): Observable {\n return query$\n .pipe(\n switchMap(active => active ? factory() : EMPTY)\n )\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n EMPTY,\n Observable,\n catchError,\n from,\n map,\n of,\n shareReplay,\n switchMap,\n throwError\n} from \"rxjs\"\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Fetch the given URL\n *\n * If the request fails (e.g. when dispatched from `file://` locations), the\n * observable will complete without emitting a value.\n *\n * @param url - Request URL\n * @param options - Options\n *\n * @returns Response observable\n */\nexport function request(\n url: URL | string, options: RequestInit = { credentials: \"same-origin\" }\n): Observable {\n return from(fetch(`${url}`, options))\n .pipe(\n catchError(() => EMPTY),\n switchMap(res => res.status !== 200\n ? throwError(() => new Error(res.statusText))\n : of(res)\n )\n )\n}\n\n/**\n * Fetch JSON from the given URL\n *\n * @template T - Data type\n *\n * @param url - Request URL\n * @param options - Options\n *\n * @returns Data observable\n */\nexport function requestJSON(\n url: URL | string, options?: RequestInit\n): Observable {\n return request(url, options)\n .pipe(\n switchMap(res => res.json()),\n shareReplay(1)\n )\n}\n\n/**\n * Fetch XML from the given URL\n *\n * @param url - Request URL\n * @param options - Options\n *\n * @returns Data observable\n */\nexport function requestXML(\n url: URL | string, options?: RequestInit\n): Observable {\n const dom = new DOMParser()\n return request(url, options)\n .pipe(\n switchMap(res => res.text()),\n map(res => dom.parseFromString(res, \"text/xml\")),\n shareReplay(1)\n )\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n Observable,\n defer,\n finalize,\n fromEvent,\n map,\n merge,\n switchMap,\n take,\n throwError\n} from \"rxjs\"\n\nimport { h } from \"~/utilities\"\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Create and load a `script` element\n *\n * This function returns an observable that will emit when the script was\n * successfully loaded, or throw an error if it didn't.\n *\n * @param src - Script URL\n *\n * @returns Script observable\n */\nexport function watchScript(src: string): Observable {\n const script = h(\"script\", { src })\n return defer(() => {\n document.head.appendChild(script)\n return merge(\n fromEvent(script, \"load\"),\n fromEvent(script, \"error\")\n .pipe(\n switchMap(() => (\n throwError(() => new ReferenceError(`Invalid script: ${src}`))\n ))\n )\n )\n .pipe(\n map(() => undefined),\n finalize(() => document.head.removeChild(script)),\n take(1)\n )\n })\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n Observable,\n fromEvent,\n map,\n merge,\n startWith\n} from \"rxjs\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Viewport offset\n */\nexport interface ViewportOffset {\n x: number /* Horizontal offset */\n y: number /* Vertical offset */\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Retrieve viewport offset\n *\n * On iOS Safari, viewport offset can be negative due to overflow scrolling.\n * As this may induce strange behaviors downstream, we'll just limit it to 0.\n *\n * @returns Viewport offset\n */\nexport function getViewportOffset(): ViewportOffset {\n return {\n x: Math.max(0, scrollX),\n y: Math.max(0, scrollY)\n }\n}\n\n/* ------------------------------------------------------------------------- */\n\n/**\n * Watch viewport offset\n *\n * @returns Viewport offset observable\n */\nexport function watchViewportOffset(): Observable {\n return merge(\n fromEvent(window, \"scroll\", { passive: true }),\n fromEvent(window, \"resize\", { passive: true })\n )\n .pipe(\n map(getViewportOffset),\n startWith(getViewportOffset())\n )\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n Observable,\n fromEvent,\n map,\n startWith\n} from \"rxjs\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Viewport size\n */\nexport interface ViewportSize {\n width: number /* Viewport width */\n height: number /* Viewport height */\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Retrieve viewport size\n *\n * @returns Viewport size\n */\nexport function getViewportSize(): ViewportSize {\n return {\n width: innerWidth,\n height: innerHeight\n }\n}\n\n/* ------------------------------------------------------------------------- */\n\n/**\n * Watch viewport size\n *\n * @returns Viewport size observable\n */\nexport function watchViewportSize(): Observable {\n return fromEvent(window, \"resize\", { passive: true })\n .pipe(\n map(getViewportSize),\n startWith(getViewportSize())\n )\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n Observable,\n combineLatest,\n map,\n shareReplay\n} from \"rxjs\"\n\nimport {\n ViewportOffset,\n watchViewportOffset\n} from \"../offset\"\nimport {\n ViewportSize,\n watchViewportSize\n} from \"../size\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Viewport\n */\nexport interface Viewport {\n offset: ViewportOffset /* Viewport offset */\n size: ViewportSize /* Viewport size */\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Watch viewport\n *\n * @returns Viewport observable\n */\nexport function watchViewport(): Observable {\n return combineLatest([\n watchViewportOffset(),\n watchViewportSize()\n ])\n .pipe(\n map(([offset, size]) => ({ offset, size })),\n shareReplay(1)\n )\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n Observable,\n combineLatest,\n distinctUntilKeyChanged,\n map\n} from \"rxjs\"\n\nimport { Header } from \"~/components\"\n\nimport { getElementOffset } from \"../../element\"\nimport { Viewport } from \"../_\"\n\n/* ----------------------------------------------------------------------------\n * Helper types\n * ------------------------------------------------------------------------- */\n\n/**\n * Watch options\n */\ninterface WatchOptions {\n viewport$: Observable /* Viewport observable */\n header$: Observable
    /* Header observable */\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Watch viewport relative to element\n *\n * @param el - Element\n * @param options - Options\n *\n * @returns Viewport observable\n */\nexport function watchViewportAt(\n el: HTMLElement, { viewport$, header$ }: WatchOptions\n): Observable {\n const size$ = viewport$\n .pipe(\n distinctUntilKeyChanged(\"size\")\n )\n\n /* Compute element offset */\n const offset$ = combineLatest([size$, header$])\n .pipe(\n map(() => getElementOffset(el))\n )\n\n /* Compute relative viewport, return hot observable */\n return combineLatest([header$, viewport$, offset$])\n .pipe(\n map(([{ height }, { offset, size }, { x, y }]) => ({\n offset: {\n x: offset.x - x,\n y: offset.y - y + height\n },\n size\n }))\n )\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n Observable,\n Subject,\n fromEvent,\n map,\n share,\n switchMap,\n tap,\n throttle\n} from \"rxjs\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Worker message\n */\nexport interface WorkerMessage {\n type: unknown /* Message type */\n data?: unknown /* Message data */\n}\n\n/**\n * Worker handler\n *\n * @template T - Message type\n */\nexport interface WorkerHandler<\n T extends WorkerMessage\n> {\n tx$: Subject /* Message transmission subject */\n rx$: Observable /* Message receive observable */\n}\n\n/* ----------------------------------------------------------------------------\n * Helper types\n * ------------------------------------------------------------------------- */\n\n/**\n * Watch options\n *\n * @template T - Worker message type\n */\ninterface WatchOptions {\n tx$: Observable /* Message transmission observable */\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Watch a web worker\n *\n * This function returns an observable that sends all values emitted by the\n * message observable to the web worker. Web worker communication is expected\n * to be bidirectional (request-response) and synchronous. Messages that are\n * emitted during a pending request are throttled, the last one is emitted.\n *\n * @param worker - Web worker\n * @param options - Options\n *\n * @returns Worker message observable\n */\nexport function watchWorker(\n worker: Worker, { tx$ }: WatchOptions\n): Observable {\n\n /* Intercept messages from worker-like objects */\n const rx$ = fromEvent(worker, \"message\")\n .pipe(\n map(({ data }) => data as T)\n )\n\n /* Send and receive messages, return hot observable */\n return tx$\n .pipe(\n throttle(() => rx$, { leading: true, trailing: true }),\n tap(message => worker.postMessage(message)),\n switchMap(() => rx$),\n share()\n )\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport { getElement, getLocation } from \"~/browser\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Feature flag\n */\nexport type Flag =\n | \"announce.dismiss\" /* Dismissable announcement bar */\n | \"content.code.annotate\" /* Code annotations */\n | \"content.lazy\" /* Lazy content elements */\n | \"content.tabs.link\" /* Link content tabs */\n | \"header.autohide\" /* Hide header */\n | \"navigation.expand\" /* Automatic expansion */\n | \"navigation.indexes\" /* Section pages */\n | \"navigation.instant\" /* Instant loading */\n | \"navigation.sections\" /* Section navigation */\n | \"navigation.tabs\" /* Tabs navigation */\n | \"navigation.tabs.sticky\" /* Tabs navigation (sticky) */\n | \"navigation.top\" /* Back-to-top button */\n | \"navigation.tracking\" /* Anchor tracking */\n | \"search.highlight\" /* Search highlighting */\n | \"search.share\" /* Search sharing */\n | \"search.suggest\" /* Search suggestions */\n | \"toc.follow\" /* Following table of contents */\n | \"toc.integrate\" /* Integrated table of contents */\n\n/* ------------------------------------------------------------------------- */\n\n/**\n * Translation\n */\nexport type Translation =\n | \"clipboard.copy\" /* Copy to clipboard */\n | \"clipboard.copied\" /* Copied to clipboard */\n | \"search.config.lang\" /* Search language */\n | \"search.config.pipeline\" /* Search pipeline */\n | \"search.config.separator\" /* Search separator */\n | \"search.placeholder\" /* Search */\n | \"search.result.placeholder\" /* Type to start searching */\n | \"search.result.none\" /* No matching documents */\n | \"search.result.one\" /* 1 matching document */\n | \"search.result.other\" /* # matching documents */\n | \"search.result.more.one\" /* 1 more on this page */\n | \"search.result.more.other\" /* # more on this page */\n | \"search.result.term.missing\" /* Missing */\n | \"select.version.title\" /* Version selector */\n\n/**\n * Translations\n */\nexport type Translations = Record\n\n/* ------------------------------------------------------------------------- */\n\n/**\n * Versioning\n */\nexport interface Versioning {\n provider: \"mike\" /* Version provider */\n default?: string /* Default version */\n}\n\n/**\n * Configuration\n */\nexport interface Config {\n base: string /* Base URL */\n features: Flag[] /* Feature flags */\n translations: Translations /* Translations */\n search: string /* Search worker URL */\n tags?: Record /* Tags mapping */\n version?: Versioning /* Versioning */\n}\n\n/* ----------------------------------------------------------------------------\n * Data\n * ------------------------------------------------------------------------- */\n\n/**\n * Retrieve global configuration and make base URL absolute\n */\nconst script = getElement(\"#__config\")\nconst config: Config = JSON.parse(script.textContent!)\nconfig.base = `${new URL(config.base, getLocation())}`\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Retrieve global configuration\n *\n * @returns Global configuration\n */\nexport function configuration(): Config {\n return config\n}\n\n/**\n * Check whether a feature flag is enabled\n *\n * @param flag - Feature flag\n *\n * @returns Test result\n */\nexport function feature(flag: Flag): boolean {\n return config.features.includes(flag)\n}\n\n/**\n * Retrieve the translation for the given key\n *\n * @param key - Key to be translated\n * @param value - Positional value, if any\n *\n * @returns Translation\n */\nexport function translation(\n key: Translation, value?: string | number\n): string {\n return typeof value !== \"undefined\"\n ? config.translations[key].replace(\"#\", value.toString())\n : config.translations[key]\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport { getElement, getElements } from \"~/browser\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Component type\n */\nexport type ComponentType =\n | \"announce\" /* Announcement bar */\n | \"container\" /* Container */\n | \"consent\" /* Consent */\n | \"content\" /* Content */\n | \"dialog\" /* Dialog */\n | \"header\" /* Header */\n | \"header-title\" /* Header title */\n | \"header-topic\" /* Header topic */\n | \"main\" /* Main area */\n | \"outdated\" /* Version warning */\n | \"palette\" /* Color palette */\n | \"search\" /* Search */\n | \"search-query\" /* Search input */\n | \"search-result\" /* Search results */\n | \"search-share\" /* Search sharing */\n | \"search-suggest\" /* Search suggestions */\n | \"sidebar\" /* Sidebar */\n | \"skip\" /* Skip link */\n | \"source\" /* Repository information */\n | \"tabs\" /* Navigation tabs */\n | \"toc\" /* Table of contents */\n | \"top\" /* Back-to-top button */\n\n/**\n * Component\n *\n * @template T - Component type\n * @template U - Reference type\n */\nexport type Component<\n T extends {} = {},\n U extends HTMLElement = HTMLElement\n> =\n T & {\n ref: U /* Component reference */\n }\n\n/* ----------------------------------------------------------------------------\n * Helper types\n * ------------------------------------------------------------------------- */\n\n/**\n * Component type map\n */\ninterface ComponentTypeMap {\n \"announce\": HTMLElement /* Announcement bar */\n \"container\": HTMLElement /* Container */\n \"consent\": HTMLElement /* Consent */\n \"content\": HTMLElement /* Content */\n \"dialog\": HTMLElement /* Dialog */\n \"header\": HTMLElement /* Header */\n \"header-title\": HTMLElement /* Header title */\n \"header-topic\": HTMLElement /* Header topic */\n \"main\": HTMLElement /* Main area */\n \"outdated\": HTMLElement /* Version warning */\n \"palette\": HTMLElement /* Color palette */\n \"search\": HTMLElement /* Search */\n \"search-query\": HTMLInputElement /* Search input */\n \"search-result\": HTMLElement /* Search results */\n \"search-share\": HTMLAnchorElement /* Search sharing */\n \"search-suggest\": HTMLElement /* Search suggestions */\n \"sidebar\": HTMLElement /* Sidebar */\n \"skip\": HTMLAnchorElement /* Skip link */\n \"source\": HTMLAnchorElement /* Repository information */\n \"tabs\": HTMLElement /* Navigation tabs */\n \"toc\": HTMLElement /* Table of contents */\n \"top\": HTMLAnchorElement /* Back-to-top button */\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Retrieve the element for a given component or throw a reference error\n *\n * @template T - Component type\n *\n * @param type - Component type\n * @param node - Node of reference\n *\n * @returns Element\n */\nexport function getComponentElement(\n type: T, node: ParentNode = document\n): ComponentTypeMap[T] {\n return getElement(`[data-md-component=${type}]`, node)\n}\n\n/**\n * Retrieve all elements for a given component\n *\n * @template T - Component type\n *\n * @param type - Component type\n * @param node - Node of reference\n *\n * @returns Elements\n */\nexport function getComponentElements(\n type: T, node: ParentNode = document\n): ComponentTypeMap[T][] {\n return getElements(`[data-md-component=${type}]`, node)\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n EMPTY,\n Observable,\n Subject,\n defer,\n finalize,\n fromEvent,\n map,\n startWith,\n tap\n} from \"rxjs\"\n\nimport { feature } from \"~/_\"\nimport { getElement } from \"~/browser\"\n\nimport { Component } from \"../_\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Announcement bar\n */\nexport interface Announce {\n hash: number /* Content hash */\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Watch announcement bar\n *\n * @param el - Announcement bar element\n *\n * @returns Announcement bar observable\n */\nexport function watchAnnounce(\n el: HTMLElement\n): Observable {\n const button = getElement(\".md-typeset > :first-child\", el)\n return fromEvent(button, \"click\", { once: true })\n .pipe(\n map(() => getElement(\".md-typeset\", el)),\n map(content => ({ hash: __md_hash(content.innerHTML) }))\n )\n}\n\n/**\n * Mount announcement bar\n *\n * @param el - Announcement bar element\n *\n * @returns Announcement bar component observable\n */\nexport function mountAnnounce(\n el: HTMLElement\n): Observable> {\n if (!feature(\"announce.dismiss\") || !el.childElementCount)\n return EMPTY\n\n /* Mount component on subscription */\n return defer(() => {\n const push$ = new Subject()\n push$\n .pipe(\n startWith({ hash: __md_get(\"__announce\") })\n )\n .subscribe(({ hash }) => {\n if (hash && hash === (__md_get(\"__announce\") ?? hash)) {\n el.hidden = true\n\n /* Persist preference in local storage */\n __md_set(\"__announce\", hash)\n }\n })\n\n /* Create and return component */\n return watchAnnounce(el)\n .pipe(\n tap(state => push$.next(state)),\n finalize(() => push$.complete()),\n map(state => ({ ref: el, ...state }))\n )\n })\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n Observable,\n Subject,\n finalize,\n map,\n tap\n} from \"rxjs\"\n\nimport { Component } from \"../_\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Consent\n */\nexport interface Consent {\n hidden: boolean /* Consent is hidden */\n}\n\n/**\n * Consent defaults\n */\nexport interface ConsentDefaults {\n analytics?: boolean /* Consent for Analytics */\n github?: boolean /* Consent for GitHub */\n}\n\n/* ----------------------------------------------------------------------------\n * Helper types\n * ------------------------------------------------------------------------- */\n\n/**\n * Watch options\n */\ninterface WatchOptions {\n target$: Observable /* Target observable */\n}\n\n/**\n * Mount options\n */\ninterface MountOptions {\n target$: Observable /* Target observable */\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Watch consent\n *\n * @param el - Consent element\n * @param options - Options\n *\n * @returns Consent observable\n */\nexport function watchConsent(\n el: HTMLElement, { target$ }: WatchOptions\n): Observable {\n return target$\n .pipe(\n map(target => ({ hidden: target !== el }))\n )\n}\n\n/* ------------------------------------------------------------------------- */\n\n/**\n * Mount consent\n *\n * @param el - Consent element\n * @param options - Options\n *\n * @returns Consent component observable\n */\nexport function mountConsent(\n el: HTMLElement, options: MountOptions\n): Observable> {\n const internal$ = new Subject()\n internal$.subscribe(({ hidden }) => {\n el.hidden = hidden\n })\n\n /* Create and return component */\n return watchConsent(el, options)\n .pipe(\n tap(state => internal$.next(state)),\n finalize(() => internal$.complete()),\n map(state => ({ ref: el, ...state }))\n )\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport ClipboardJS from \"clipboard\"\nimport {\n EMPTY,\n Observable,\n Subject,\n defer,\n distinctUntilChanged,\n distinctUntilKeyChanged,\n filter,\n finalize,\n map,\n mergeWith,\n switchMap,\n take,\n tap\n} from \"rxjs\"\n\nimport { feature } from \"~/_\"\nimport {\n getElementContentSize,\n watchElementSize,\n watchElementVisibility\n} from \"~/browser\"\nimport { renderClipboardButton } from \"~/templates\"\n\nimport { Component } from \"../../../_\"\nimport {\n Annotation,\n mountAnnotationList\n} from \"../../annotation\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Code block\n */\nexport interface CodeBlock {\n scrollable: boolean /* Code block overflows */\n}\n\n/* ----------------------------------------------------------------------------\n * Helper types\n * ------------------------------------------------------------------------- */\n\n/**\n * Mount options\n */\ninterface MountOptions {\n target$: Observable /* Location target observable */\n print$: Observable /* Media print observable */\n}\n\n/* ----------------------------------------------------------------------------\n * Data\n * ------------------------------------------------------------------------- */\n\n/**\n * Global sequence number for code blocks\n */\nlet sequence = 0\n\n/* ----------------------------------------------------------------------------\n * Helper functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Find candidate list element directly following a code block\n *\n * @param el - Code block element\n *\n * @returns List element or nothing\n */\nfunction findCandidateList(el: HTMLElement): HTMLElement | undefined {\n if (el.nextElementSibling) {\n const sibling = el.nextElementSibling as HTMLElement\n if (sibling.tagName === \"OL\")\n return sibling\n\n /* Skip empty paragraphs - see https://bit.ly/3r4ZJ2O */\n else if (sibling.tagName === \"P\" && !sibling.children.length)\n return findCandidateList(sibling)\n }\n\n /* Everything else */\n return undefined\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Watch code block\n *\n * This function monitors size changes of the viewport, as well as switches of\n * content tabs with embedded code blocks, as both may trigger overflow.\n *\n * @param el - Code block element\n *\n * @returns Code block observable\n */\nexport function watchCodeBlock(\n el: HTMLElement\n): Observable {\n return watchElementSize(el)\n .pipe(\n map(({ width }) => {\n const content = getElementContentSize(el)\n return {\n scrollable: content.width > width\n }\n }),\n distinctUntilKeyChanged(\"scrollable\")\n )\n}\n\n/**\n * Mount code block\n *\n * This function ensures that an overflowing code block is focusable through\n * keyboard, so it can be scrolled without a mouse to improve on accessibility.\n * Furthermore, if code annotations are enabled, they are mounted if and only\n * if the code block is currently visible, e.g., not in a hidden content tab.\n *\n * Note that code blocks may be mounted eagerly or lazily. If they're mounted\n * lazily (on first visibility), code annotation anchor links will not work,\n * as they are evaluated on initial page load, and code annotations in general\n * might feel a little bumpier.\n *\n * @param el - Code block element\n * @param options - Options\n *\n * @returns Code block and annotation component observable\n */\nexport function mountCodeBlock(\n el: HTMLElement, options: MountOptions\n): Observable> {\n const { matches: hover } = matchMedia(\"(hover)\")\n\n /* Defer mounting of code block - see https://bit.ly/3vHVoVD */\n const factory$ = defer(() => {\n const push$ = new Subject()\n push$.subscribe(({ scrollable }) => {\n if (scrollable && hover)\n el.setAttribute(\"tabindex\", \"0\")\n else\n el.removeAttribute(\"tabindex\")\n })\n\n /* Render button for Clipboard.js integration */\n if (ClipboardJS.isSupported()) {\n const parent = el.closest(\"pre\")!\n parent.id = `__code_${++sequence}`\n parent.insertBefore(\n renderClipboardButton(parent.id),\n el\n )\n }\n\n /* Handle code annotations */\n const container = el.closest(\".highlight\")\n if (container instanceof HTMLElement) {\n const list = findCandidateList(container)\n\n /* Mount code annotations, if enabled */\n if (typeof list !== \"undefined\" && (\n container.classList.contains(\"annotate\") ||\n feature(\"content.code.annotate\")\n )) {\n const annotations$ = mountAnnotationList(list, el, options)\n\n /* Create and return component */\n return watchCodeBlock(el)\n .pipe(\n tap(state => push$.next(state)),\n finalize(() => push$.complete()),\n map(state => ({ ref: el, ...state })),\n mergeWith(\n watchElementSize(container)\n .pipe(\n map(({ width, height }) => width && height),\n distinctUntilChanged(),\n switchMap(active => active ? annotations$ : EMPTY)\n )\n )\n )\n }\n }\n\n /* Create and return component */\n return watchCodeBlock(el)\n .pipe(\n tap(state => push$.next(state)),\n finalize(() => push$.complete()),\n map(state => ({ ref: el, ...state }))\n )\n })\n\n /* Mount code block lazily */\n if (feature(\"content.lazy\"))\n return watchElementVisibility(el)\n .pipe(\n filter(visible => visible),\n take(1),\n switchMap(() => factory$)\n )\n\n /* Mount code block */\n return factory$\n}\n", "/*\n * Copyright (c) 2016-2021 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport { h } from \"~/utilities\"\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Render a tooltip\n *\n * @param id - Tooltip identifier\n *\n * @returns Element\n */\nexport function renderTooltip(id?: string): HTMLElement {\n return (\n
    \n
    \n
    \n )\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport { h } from \"~/utilities\"\n\nimport { renderTooltip } from \"../tooltip\"\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Render an annotation\n *\n * @param id - Annotation identifier\n * @param prefix - Tooltip identifier prefix\n *\n * @returns Element\n */\nexport function renderAnnotation(\n id: string | number, prefix?: string\n): HTMLElement {\n prefix = prefix ? `${prefix}_annotation_${id}` : undefined\n\n /* Render tooltip with anchor, if given */\n if (prefix) {\n const anchor = prefix ? `#${prefix}` : undefined\n return (\n \n )\n } else {\n return (\n \n )\n }\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport { translation } from \"~/_\"\nimport { h } from \"~/utilities\"\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Render a 'copy-to-clipboard' button\n *\n * @param id - Unique identifier\n *\n * @returns Element\n */\nexport function renderClipboardButton(id: string): HTMLElement {\n return (\n code`}\n >\n )\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport { ComponentChild } from \"preact\"\n\nimport { configuration, feature, translation } from \"~/_\"\nimport {\n SearchDocument,\n SearchMetadata,\n SearchResultItem\n} from \"~/integrations/search\"\nimport { h, truncate } from \"~/utilities\"\n\n/* ----------------------------------------------------------------------------\n * Helper types\n * ------------------------------------------------------------------------- */\n\n/**\n * Render flag\n */\nconst enum Flag {\n TEASER = 1, /* Render teaser */\n PARENT = 2 /* Render as parent */\n}\n\n/* ----------------------------------------------------------------------------\n * Helper function\n * ------------------------------------------------------------------------- */\n\n/**\n * Render a search document\n *\n * @param document - Search document\n * @param flag - Render flags\n *\n * @returns Element\n */\nfunction renderSearchDocument(\n document: SearchDocument & SearchMetadata, flag: Flag\n): HTMLElement {\n const parent = flag & Flag.PARENT\n const teaser = flag & Flag.TEASER\n\n /* Render missing query terms */\n const missing = Object.keys(document.terms)\n .filter(key => !document.terms[key])\n .reduce((list, key) => [\n ...list, {key}, \" \"\n ], [])\n .slice(0, -1)\n\n /* Assemble query string for highlighting */\n const url = new URL(document.location)\n if (feature(\"search.highlight\"))\n url.searchParams.set(\"h\", Object.entries(document.terms)\n .filter(([, match]) => match)\n .reduce((highlight, [value]) => `${highlight} ${value}`.trim(), \"\")\n )\n\n /* Render article or section, depending on flags */\n const { tags } = configuration()\n return (\n \n \n {parent > 0 &&
    }\n

    {document.title}

    \n {teaser > 0 && document.text.length > 0 &&\n

    \n {truncate(document.text, 320)}\n

    \n }\n {document.tags && (\n
    \n {document.tags.map(tag => {\n const id = tag.replace(/<[^>]+>/g, \"\")\n const type = tags\n ? id in tags\n ? `md-tag-icon md-tag-icon--${tags[id]}`\n : \"md-tag-icon\"\n : \"\"\n return (\n {tag}\n )\n })}\n
    \n )}\n {teaser > 0 && missing.length > 0 &&\n

    \n {translation(\"search.result.term.missing\")}: {...missing}\n

    \n }\n \n     \n )\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Render a search result\n *\n * @param result - Search result\n *\n * @returns Element\n */\nexport function renderSearchResultItem(\n result: SearchResultItem\n): HTMLElement {\n const threshold = result[0].score\n const docs = [...result]\n\n /* Find and extract parent article */\n const parent = docs.findIndex(doc => !doc.location.includes(\"#\"))\n const [article] = docs.splice(parent, 1)\n\n /* Determine last index above threshold */\n let index = docs.findIndex(doc => doc.score < threshold)\n if (index === -1)\n index = docs.length\n\n /* Partition sections */\n const best = docs.slice(0, index)\n const more = docs.slice(index)\n\n /* Render children */\n const children = [\n renderSearchDocument(article, Flag.PARENT | +(!parent && index === 0)),\n ...best.map(section => renderSearchDocument(section, Flag.TEASER)),\n ...more.length ? [\n
    \n \n {more.length > 0 && more.length === 1\n ? translation(\"search.result.more.one\")\n : translation(\"search.result.more.other\", more.length)\n }\n \n {...more.map(section => renderSearchDocument(section, Flag.TEASER))}\n
    \n ] : []\n ]\n\n /* Render search result */\n return (\n
  • \n {children}\n
    • \n )\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport { SourceFacts } from \"~/components\"\nimport { h, round } from \"~/utilities\"\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Render repository facts\n *\n * @param facts - Repository facts\n *\n * @returns Element\n */\nexport function renderSourceFacts(facts: SourceFacts): HTMLElement {\n return (\n
      \n {Object.entries(facts).map(([key, value]) => (\n
    • \n {typeof value === \"number\" ? round(value) : value}\n
      • \n ))}\n
    \n )\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport { h } from \"~/utilities\"\n\n/* ----------------------------------------------------------------------------\n * Helper types\n * ------------------------------------------------------------------------- */\n\n/**\n * Tabbed control type\n */\ntype TabbedControlType =\n | \"prev\"\n | \"next\"\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Render control for content tabs\n *\n * @param type - Control type\n *\n * @returns Element\n */\nexport function renderTabbedControl(\n type: TabbedControlType\n): HTMLElement {\n const classes = `tabbed-control tabbed-control--${type}`\n return (\n \n )\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport { h } from \"~/utilities\"\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Render a table inside a wrapper to improve scrolling on mobile\n *\n * @param table - Table element\n *\n * @returns Element\n */\nexport function renderTable(table: HTMLElement): HTMLElement {\n return (\n
    \n
    \n {table}\n
    \n
    \n )\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport { configuration, translation } from \"~/_\"\nimport { h } from \"~/utilities\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Version\n */\nexport interface Version {\n version: string /* Version identifier */\n title: string /* Version title */\n aliases: string[] /* Version aliases */\n}\n\n/* ----------------------------------------------------------------------------\n * Helper functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Render a version\n *\n * @param version - Version\n *\n * @returns Element\n */\nfunction renderVersion(version: Version): HTMLElement {\n const config = configuration()\n\n /* Ensure trailing slash - see https://bit.ly/3rL5u3f */\n const url = new URL(`../${version.version}/`, config.base)\n return (\n
  • \n \n {version.title}\n \n
    • \n )\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Render a version selector\n *\n * @param versions - Versions\n * @param active - Active version\n *\n * @returns Element\n */\nexport function renderVersionSelector(\n versions: Version[], active: Version\n): HTMLElement {\n return (\n
    \n \n {active.title}\n \n
      \n {versions.map(renderVersion)}\n
    \n
    \n )\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n Observable,\n Subject,\n animationFrameScheduler,\n auditTime,\n combineLatest,\n debounceTime,\n defer,\n delay,\n filter,\n finalize,\n fromEvent,\n map,\n merge,\n switchMap,\n take,\n takeLast,\n takeUntil,\n tap,\n throttleTime,\n withLatestFrom\n} from \"rxjs\"\n\nimport {\n ElementOffset,\n getActiveElement,\n getElementSize,\n watchElementContentOffset,\n watchElementFocus,\n watchElementOffset,\n watchElementVisibility\n} from \"~/browser\"\n\nimport { Component } from \"../../../_\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Annotation\n */\nexport interface Annotation {\n active: boolean /* Annotation is active */\n offset: ElementOffset /* Annotation offset */\n}\n\n/* ----------------------------------------------------------------------------\n * Helper types\n * ------------------------------------------------------------------------- */\n\n/**\n * Mount options\n */\ninterface MountOptions {\n target$: Observable /* Location target observable */\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Watch annotation\n *\n * @param el - Annotation element\n * @param container - Containing element\n *\n * @returns Annotation observable\n */\nexport function watchAnnotation(\n el: HTMLElement, container: HTMLElement\n): Observable {\n const offset$ = defer(() => combineLatest([\n watchElementOffset(el),\n watchElementContentOffset(container)\n ]))\n .pipe(\n map(([{ x, y }, scroll]): ElementOffset => {\n const { width, height } = getElementSize(el)\n return ({\n x: x - scroll.x + width / 2,\n y: y - scroll.y + height / 2\n })\n })\n )\n\n /* Actively watch annotation on focus */\n return watchElementFocus(el)\n .pipe(\n switchMap(active => offset$\n .pipe(\n map(offset => ({ active, offset })),\n take(+!active || Infinity)\n )\n )\n )\n}\n\n/**\n * Mount annotation\n *\n * @param el - Annotation element\n * @param container - Containing element\n * @param options - Options\n *\n * @returns Annotation component observable\n */\nexport function mountAnnotation(\n el: HTMLElement, container: HTMLElement, { target$ }: MountOptions\n): Observable> {\n const [tooltip, index] = Array.from(el.children)\n\n /* Mount component on subscription */\n return defer(() => {\n const push$ = new Subject()\n const done$ = push$.pipe(takeLast(1))\n push$.subscribe({\n\n /* Handle emission */\n next({ offset }) {\n el.style.setProperty(\"--md-tooltip-x\", `${offset.x}px`)\n el.style.setProperty(\"--md-tooltip-y\", `${offset.y}px`)\n },\n\n /* Handle complete */\n complete() {\n el.style.removeProperty(\"--md-tooltip-x\")\n el.style.removeProperty(\"--md-tooltip-y\")\n }\n })\n\n /* Start animation only when annotation is visible */\n watchElementVisibility(el)\n .pipe(\n takeUntil(done$)\n )\n .subscribe(visible => {\n el.toggleAttribute(\"data-md-visible\", visible)\n })\n\n /* Toggle tooltip presence to mitigate empty lines when copying */\n merge(\n push$.pipe(filter(({ active }) => active)),\n push$.pipe(debounceTime(250), filter(({ active }) => !active))\n )\n .subscribe({\n\n /* Handle emission */\n next({ active }) {\n if (active)\n el.prepend(tooltip)\n else\n tooltip.remove()\n },\n\n /* Handle complete */\n complete() {\n el.prepend(tooltip)\n }\n })\n\n /* Toggle tooltip visibility */\n push$\n .pipe(\n auditTime(16, animationFrameScheduler)\n )\n .subscribe(({ active }) => {\n tooltip.classList.toggle(\"md-tooltip--active\", active)\n })\n\n /* Track relative origin of tooltip */\n push$\n .pipe(\n throttleTime(125, animationFrameScheduler),\n filter(() => !!el.offsetParent),\n map(() => el.offsetParent!.getBoundingClientRect()),\n map(({ x }) => x)\n )\n .subscribe({\n\n /* Handle emission */\n next(origin) {\n if (origin)\n el.style.setProperty(\"--md-tooltip-0\", `${-origin}px`)\n else\n el.style.removeProperty(\"--md-tooltip-0\")\n },\n\n /* Handle complete */\n complete() {\n el.style.removeProperty(\"--md-tooltip-0\")\n }\n })\n\n /* Allow to copy link without scrolling to anchor */\n fromEvent(index, \"click\")\n .pipe(\n takeUntil(done$),\n filter(ev => !(ev.metaKey || ev.ctrlKey))\n )\n .subscribe(ev => ev.preventDefault())\n\n /* Allow to open link in new tab or blur on close */\n fromEvent(index, \"mousedown\")\n .pipe(\n takeUntil(done$),\n withLatestFrom(push$)\n )\n .subscribe(([ev, { active }]) => {\n\n /* Open in new tab */\n if (ev.button !== 0 || ev.metaKey || ev.ctrlKey) {\n ev.preventDefault()\n\n /* Close annotation */\n } else if (active) {\n ev.preventDefault()\n\n /* Focus parent annotation, if any */\n const parent = el.parentElement!.closest(\".md-annotation\")\n if (parent instanceof HTMLElement)\n parent.focus()\n else\n getActiveElement()?.blur()\n }\n })\n\n /* Open and focus annotation on location target */\n target$\n .pipe(\n takeUntil(done$),\n filter(target => target === tooltip),\n delay(125)\n )\n .subscribe(() => el.focus())\n\n /* Create and return component */\n return watchAnnotation(el, container)\n .pipe(\n tap(state => push$.next(state)),\n finalize(() => push$.complete()),\n map(state => ({ ref: el, ...state }))\n )\n })\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n EMPTY,\n Observable,\n Subject,\n defer,\n finalize,\n merge,\n share,\n takeLast,\n takeUntil\n} from \"rxjs\"\n\nimport {\n getElement,\n getElements,\n getOptionalElement\n} from \"~/browser\"\nimport { renderAnnotation } from \"~/templates\"\n\nimport { Component } from \"../../../_\"\nimport {\n Annotation,\n mountAnnotation\n} from \"../_\"\n\n/* ----------------------------------------------------------------------------\n * Helper types\n * ------------------------------------------------------------------------- */\n\n/**\n * Mount options\n */\ninterface MountOptions {\n target$: Observable /* Location target observable */\n print$: Observable /* Media print observable */\n}\n\n/* ----------------------------------------------------------------------------\n * Helper functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Find all annotation markers in the given code block\n *\n * @param container - Containing element\n *\n * @returns Annotation markers\n */\nfunction findAnnotationMarkers(container: HTMLElement): Text[] {\n const markers: Text[] = []\n for (const el of getElements(\".c, .c1, .cm\", container)) {\n const nodes: Text[] = []\n\n /* Find all text nodes in current element */\n const it = document.createNodeIterator(el, NodeFilter.SHOW_TEXT)\n for (let node = it.nextNode(); node; node = it.nextNode())\n nodes.push(node as Text)\n\n /* Find all markers in each text node */\n for (let text of nodes) {\n let match: RegExpExecArray | null\n\n /* Split text at marker and add to list */\n while ((match = /(\\(\\d+\\))(!)?/.exec(text.textContent!))) {\n const [, id, force] = match\n if (typeof force === \"undefined\") {\n const marker = text.splitText(match.index)\n text = marker.splitText(id.length)\n markers.push(marker)\n\n /* Replace entire text with marker */\n } else {\n text.textContent = id\n markers.push(text)\n break\n }\n }\n }\n }\n return markers\n}\n\n/**\n * Swap the child nodes of two elements\n *\n * @param source - Source element\n * @param target - Target element\n */\nfunction swap(source: HTMLElement, target: HTMLElement): void {\n target.append(...Array.from(source.childNodes))\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Mount annotation list\n *\n * This function analyzes the containing code block and checks for markers\n * referring to elements in the given annotation list. If no markers are found,\n * the list is left untouched. Otherwise, list elements are rendered as\n * annotations inside the code block.\n *\n * @param el - Annotation list element\n * @param container - Containing element\n * @param options - Options\n *\n * @returns Annotation component observable\n */\nexport function mountAnnotationList(\n el: HTMLElement, container: HTMLElement, { target$, print$ }: MountOptions\n): Observable> {\n\n /* Compute prefix for tooltip anchors */\n const parent = container.closest(\"[id]\")\n const prefix = parent?.id\n\n /* Find and replace all markers with empty annotations */\n const annotations = new Map()\n for (const marker of findAnnotationMarkers(container)) {\n const [, id] = marker.textContent!.match(/\\((\\d+)\\)/)!\n if (getOptionalElement(`li:nth-child(${id})`, el)) {\n annotations.set(id, renderAnnotation(id, prefix))\n marker.replaceWith(annotations.get(id)!)\n }\n }\n\n /* Keep list if there are no annotations to render */\n if (annotations.size === 0)\n return EMPTY\n\n /* Mount component on subscription */\n return defer(() => {\n const done$ = new Subject()\n\n /* Retrieve container pairs for swapping */\n const pairs: [HTMLElement, HTMLElement][] = []\n for (const [id, annotation] of annotations)\n pairs.push([\n getElement(\".md-typeset\", annotation),\n getElement(`li:nth-child(${id})`, el)\n ])\n\n /* Handle print mode - see https://bit.ly/3rgPdpt */\n print$\n .pipe(\n takeUntil(done$.pipe(takeLast(1)))\n )\n .subscribe(active => {\n el.hidden = !active\n\n /* Show annotations in code block or list (print) */\n for (const [inner, child] of pairs)\n if (!active)\n swap(child, inner)\n else\n swap(inner, child)\n })\n\n /* Create and return component */\n return merge(...[...annotations]\n .map(([, annotation]) => (\n mountAnnotation(annotation, container, { target$ })\n ))\n )\n .pipe(\n finalize(() => done$.complete()),\n share()\n )\n })\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n Observable,\n map,\n of,\n shareReplay,\n tap\n} from \"rxjs\"\n\nimport { watchScript } from \"~/browser\"\nimport { h } from \"~/utilities\"\n\nimport { Component } from \"../../../_\"\n\nimport themeCSS from \"./index.css\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Mermaid diagram\n */\nexport interface Mermaid {}\n\n/* ----------------------------------------------------------------------------\n * Data\n * ------------------------------------------------------------------------- */\n\n/**\n * Mermaid instance observable\n */\nlet mermaid$: Observable\n\n/**\n * Global sequence number for diagrams\n */\nlet sequence = 0\n\n/* ----------------------------------------------------------------------------\n * Helper functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Fetch Mermaid script\n *\n * @returns Mermaid scripts observable\n */\nfunction fetchScripts(): Observable {\n return typeof mermaid === \"undefined\" || mermaid instanceof Element\n ? watchScript(\"https://unpkg.com/mermaid@9.1.7/dist/mermaid.min.js\")\n : of(undefined)\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Mount Mermaid diagram\n *\n * @param el - Code block element\n *\n * @returns Mermaid diagram component observable\n */\nexport function mountMermaid(\n el: HTMLElement\n): Observable> {\n el.classList.remove(\"mermaid\") // Hack: mitigate https://bit.ly/3CiN6Du\n mermaid$ ||= fetchScripts()\n .pipe(\n tap(() => mermaid.initialize({\n startOnLoad: false,\n themeCSS,\n sequence: {\n actorFontSize: \"16px\", // Hack: mitigate https://bit.ly/3y0NEi3\n messageFontSize: \"16px\",\n noteFontSize: \"16px\"\n }\n })),\n map(() => undefined),\n shareReplay(1)\n )\n\n /* Render diagram */\n mermaid$.subscribe(() => {\n el.classList.add(\"mermaid\") // Hack: mitigate https://bit.ly/3CiN6Du\n const id = `__mermaid_${sequence++}`\n const host = h(\"div\", { class: \"mermaid\" })\n mermaid.mermaidAPI.render(id, el.textContent, (svg: string) => {\n\n /* Create a shadow root and inject diagram */\n const shadow = host.attachShadow({ mode: \"closed\" })\n shadow.innerHTML = svg\n\n /* Replace code block with diagram */\n el.replaceWith(host)\n })\n })\n\n /* Create and return component */\n return mermaid$\n .pipe(\n map(() => ({ ref: el }))\n )\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n Observable,\n Subject,\n defer,\n filter,\n finalize,\n map,\n merge,\n tap\n} from \"rxjs\"\n\nimport { Component } from \"../../_\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Details\n */\nexport interface Details {\n action: \"open\" | \"close\" /* Details state */\n reveal?: boolean /* Details is revealed */\n}\n\n/* ----------------------------------------------------------------------------\n * Helper types\n * ------------------------------------------------------------------------- */\n\n/**\n * Watch options\n */\ninterface WatchOptions {\n target$: Observable /* Location target observable */\n print$: Observable /* Media print observable */\n}\n\n/**\n * Mount options\n */\ninterface MountOptions {\n target$: Observable /* Location target observable */\n print$: Observable /* Media print observable */\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Watch details\n *\n * @param el - Details element\n * @param options - Options\n *\n * @returns Details observable\n */\nexport function watchDetails(\n el: HTMLDetailsElement, { target$, print$ }: WatchOptions\n): Observable
    {\n let open = true\n return merge(\n\n /* Open and focus details on location target */\n target$\n .pipe(\n map(target => target.closest(\"details:not([open])\")!),\n filter(details => el === details),\n map(() => ({\n action: \"open\", reveal: true\n }) as Details)\n ),\n\n /* Open details on print and close afterwards */\n print$\n .pipe(\n filter(active => active || !open),\n tap(() => open = el.open),\n map(active => ({\n action: active ? \"open\" : \"close\"\n }) as Details)\n )\n )\n}\n\n/**\n * Mount details\n *\n * This function ensures that `details` tags are opened on anchor jumps and\n * prior to printing, so the whole content of the page is visible.\n *\n * @param el - Details element\n * @param options - Options\n *\n * @returns Details component observable\n */\nexport function mountDetails(\n el: HTMLDetailsElement, options: MountOptions\n): Observable> {\n return defer(() => {\n const push$ = new Subject
    ()\n push$.subscribe(({ action, reveal }) => {\n el.toggleAttribute(\"open\", action === \"open\")\n if (reveal)\n el.scrollIntoView()\n })\n\n /* Create and return component */\n return watchDetails(el, options)\n .pipe(\n tap(state => push$.next(state)),\n finalize(() => push$.complete()),\n map(state => ({ ref: el, ...state }))\n )\n })\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport { Observable, of } from \"rxjs\"\n\nimport { renderTable } from \"~/templates\"\nimport { h } from \"~/utilities\"\n\nimport { Component } from \"../../_\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Data table\n */\nexport interface DataTable {}\n\n/* ----------------------------------------------------------------------------\n * Data\n * ------------------------------------------------------------------------- */\n\n/**\n * Sentinel for replacement\n */\nconst sentinel = h(\"table\")\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Mount data table\n *\n * This function wraps a data table in another scrollable container, so it can\n * be smoothly scrolled on smaller screen sizes and won't break the layout.\n *\n * @param el - Data table element\n *\n * @returns Data table component observable\n */\nexport function mountDataTable(\n el: HTMLElement\n): Observable> {\n el.replaceWith(sentinel)\n sentinel.replaceWith(renderTable(el))\n\n /* Create and return component */\n return of({ ref: el })\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n Observable,\n Subject,\n animationFrameScheduler,\n asyncScheduler,\n auditTime,\n combineLatest,\n defer,\n finalize,\n fromEvent,\n map,\n merge,\n skip,\n startWith,\n subscribeOn,\n takeLast,\n takeUntil,\n tap,\n withLatestFrom\n} from \"rxjs\"\n\nimport { feature } from \"~/_\"\nimport {\n Viewport,\n getElement,\n getElementContentOffset,\n getElementContentSize,\n getElementOffset,\n getElementSize,\n getElements,\n watchElementContentOffset,\n watchElementSize\n} from \"~/browser\"\nimport { renderTabbedControl } from \"~/templates\"\n\nimport { Component } from \"../../_\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Content tabs\n */\nexport interface ContentTabs {\n active: HTMLLabelElement /* Active tab label */\n}\n\n/* ----------------------------------------------------------------------------\n * Helper types\n * ------------------------------------------------------------------------- */\n\n/**\n * Mount options\n */\ninterface MountOptions {\n viewport$: Observable /* Viewport observable */\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Watch content tabs\n *\n * @param el - Content tabs element\n *\n * @returns Content tabs observable\n */\nexport function watchContentTabs(\n el: HTMLElement\n): Observable {\n const inputs = getElements(\":scope > input\", el)\n const initial = inputs.find(input => input.checked) || inputs[0]\n return merge(...inputs.map(input => fromEvent(input, \"change\")\n .pipe(\n map(() => getElement(`label[for=\"${input.id}\"]`))\n )\n ))\n .pipe(\n startWith(getElement(`label[for=\"${initial.id}\"]`)),\n map(active => ({ active }))\n )\n}\n\n/**\n * Mount content tabs\n *\n * This function scrolls the active tab into view. While this functionality is\n * provided by browsers as part of `scrollInfoView`, browsers will always also\n * scroll the vertical axis, which we do not want. Thus, we decided to provide\n * this functionality ourselves.\n *\n * @param el - Content tabs element\n * @param options - Options\n *\n * @returns Content tabs component observable\n */\nexport function mountContentTabs(\n el: HTMLElement, { viewport$ }: MountOptions\n): Observable> {\n\n /* Render content tab previous button for pagination */\n const prev = renderTabbedControl(\"prev\")\n el.append(prev)\n\n /* Render content tab next button for pagination */\n const next = renderTabbedControl(\"next\")\n el.append(next)\n\n /* Mount component on subscription */\n const container = getElement(\".tabbed-labels\", el)\n return defer(() => {\n const push$ = new Subject()\n const done$ = push$.pipe(takeLast(1))\n combineLatest([push$, watchElementSize(el)])\n .pipe(\n auditTime(1, animationFrameScheduler),\n takeUntil(done$)\n )\n .subscribe({\n\n /* Handle emission */\n next([{ active }, size]) {\n const offset = getElementOffset(active)\n const { width } = getElementSize(active)\n\n /* Set tab indicator offset and width */\n el.style.setProperty(\"--md-indicator-x\", `${offset.x}px`)\n el.style.setProperty(\"--md-indicator-width\", `${width}px`)\n\n /* Scroll container to active content tab */\n const content = getElementContentOffset(container)\n if (\n offset.x < content.x ||\n offset.x + width > content.x + size.width\n )\n container.scrollTo({\n left: Math.max(0, offset.x - 16),\n behavior: \"smooth\"\n })\n },\n\n /* Handle complete */\n complete() {\n el.style.removeProperty(\"--md-indicator-x\")\n el.style.removeProperty(\"--md-indicator-width\")\n }\n })\n\n /* Hide content tab buttons on borders */\n combineLatest([\n watchElementContentOffset(container),\n watchElementSize(container)\n ])\n .pipe(\n takeUntil(done$)\n )\n .subscribe(([offset, size]) => {\n const content = getElementContentSize(container)\n prev.hidden = offset.x < 16\n next.hidden = offset.x > content.width - size.width - 16\n })\n\n /* Paginate content tab container on click */\n merge(\n fromEvent(prev, \"click\").pipe(map(() => -1)),\n fromEvent(next, \"click\").pipe(map(() => +1))\n )\n .pipe(\n takeUntil(done$)\n )\n .subscribe(direction => {\n const { width } = getElementSize(container)\n container.scrollBy({\n left: width * direction,\n behavior: \"smooth\"\n })\n })\n\n /* Set up linking of content tabs, if enabled */\n if (feature(\"content.tabs.link\"))\n push$.pipe(\n skip(1),\n withLatestFrom(viewport$)\n )\n .subscribe(([{ active }, { offset }]) => {\n const tab = active.innerText.trim()\n if (active.hasAttribute(\"data-md-switching\")) {\n active.removeAttribute(\"data-md-switching\")\n\n /* Determine viewport offset of active tab */\n } else {\n const y = el.offsetTop - offset.y\n\n /* Passively activate other tabs */\n for (const set of getElements(\"[data-tabs]\"))\n for (const input of getElements(\n \":scope > input\", set\n )) {\n const label = getElement(`label[for=\"${input.id}\"]`)\n if (\n label !== active &&\n label.innerText.trim() === tab\n ) {\n label.setAttribute(\"data-md-switching\", \"\")\n input.click()\n break\n }\n }\n\n /* Bring active tab into view */\n window.scrollTo({\n top: el.offsetTop - y\n })\n\n /* Persist active tabs in local storage */\n const tabs = __md_get(\"__tabs\") || []\n __md_set(\"__tabs\", [...new Set([tab, ...tabs])])\n }\n })\n\n /* Create and return component */\n return watchContentTabs(el)\n .pipe(\n tap(state => push$.next(state)),\n finalize(() => push$.complete()),\n map(state => ({ ref: el, ...state }))\n )\n })\n .pipe(\n subscribeOn(asyncScheduler)\n )\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport { Observable, merge } from \"rxjs\"\n\nimport { Viewport, getElements } from \"~/browser\"\n\nimport { Component } from \"../../_\"\nimport { Annotation } from \"../annotation\"\nimport {\n CodeBlock,\n Mermaid,\n mountCodeBlock,\n mountMermaid\n} from \"../code\"\nimport {\n Details,\n mountDetails\n} from \"../details\"\nimport {\n DataTable,\n mountDataTable\n} from \"../table\"\nimport {\n ContentTabs,\n mountContentTabs\n} from \"../tabs\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Content\n */\nexport type Content =\n | Annotation\n | ContentTabs\n | CodeBlock\n | Mermaid\n | DataTable\n | Details\n\n/* ----------------------------------------------------------------------------\n * Helper types\n * ------------------------------------------------------------------------- */\n\n/**\n * Mount options\n */\ninterface MountOptions {\n viewport$: Observable /* Viewport observable */\n target$: Observable /* Location target observable */\n print$: Observable /* Media print observable */\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Mount content\n *\n * This function mounts all components that are found in the content of the\n * actual article, including code blocks, data tables and details.\n *\n * @param el - Content element\n * @param options - Options\n *\n * @returns Content component observable\n */\nexport function mountContent(\n el: HTMLElement, { viewport$, target$, print$ }: MountOptions\n): Observable> {\n return merge(\n\n /* Code blocks */\n ...getElements(\"pre:not(.mermaid) > code\", el)\n .map(child => mountCodeBlock(child, { target$, print$ })),\n\n /* Mermaid diagrams */\n ...getElements(\"pre.mermaid\", el)\n .map(child => mountMermaid(child)),\n\n /* Data tables */\n ...getElements(\"table:not([class])\", el)\n .map(child => mountDataTable(child)),\n\n /* Details */\n ...getElements(\"details\", el)\n .map(child => mountDetails(child, { target$, print$ })),\n\n /* Content tabs */\n ...getElements(\"[data-tabs]\", el)\n .map(child => mountContentTabs(child, { viewport$ }))\n )\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n Observable,\n Subject,\n defer,\n delay,\n finalize,\n map,\n merge,\n of,\n switchMap,\n tap\n} from \"rxjs\"\n\nimport { getElement } from \"~/browser\"\n\nimport { Component } from \"../_\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Dialog\n */\nexport interface Dialog {\n message: string /* Dialog message */\n active: boolean /* Dialog is active */\n}\n\n/* ----------------------------------------------------------------------------\n * Helper types\n * ------------------------------------------------------------------------- */\n\n/**\n * Watch options\n */\ninterface WatchOptions {\n alert$: Subject /* Alert subject */\n}\n\n/**\n * Mount options\n */\ninterface MountOptions {\n alert$: Subject /* Alert subject */\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Watch dialog\n *\n * @param _el - Dialog element\n * @param options - Options\n *\n * @returns Dialog observable\n */\nexport function watchDialog(\n _el: HTMLElement, { alert$ }: WatchOptions\n): Observable {\n return alert$\n .pipe(\n switchMap(message => merge(\n of(true),\n of(false).pipe(delay(2000))\n )\n .pipe(\n map(active => ({ message, active }))\n )\n )\n )\n}\n\n/**\n * Mount dialog\n *\n * This function reveals the dialog in the right corner when a new alert is\n * emitted through the subject that is passed as part of the options.\n *\n * @param el - Dialog element\n * @param options - Options\n *\n * @returns Dialog component observable\n */\nexport function mountDialog(\n el: HTMLElement, options: MountOptions\n): Observable> {\n const inner = getElement(\".md-typeset\", el)\n return defer(() => {\n const push$ = new Subject()\n push$.subscribe(({ message, active }) => {\n el.classList.toggle(\"md-dialog--active\", active)\n inner.textContent = message\n })\n\n /* Create and return component */\n return watchDialog(el, options)\n .pipe(\n tap(state => push$.next(state)),\n finalize(() => push$.complete()),\n map(state => ({ ref: el, ...state }))\n )\n })\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n Observable,\n Subject,\n bufferCount,\n combineLatest,\n combineLatestWith,\n defer,\n distinctUntilChanged,\n distinctUntilKeyChanged,\n filter,\n map,\n of,\n shareReplay,\n startWith,\n switchMap,\n takeLast,\n takeUntil\n} from \"rxjs\"\n\nimport { feature } from \"~/_\"\nimport {\n Viewport,\n watchElementSize,\n watchToggle\n} from \"~/browser\"\n\nimport { Component } from \"../../_\"\nimport { Main } from \"../../main\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Header\n */\nexport interface Header {\n height: number /* Header visible height */\n hidden: boolean /* Header is hidden */\n}\n\n/* ----------------------------------------------------------------------------\n * Helper types\n * ------------------------------------------------------------------------- */\n\n/**\n * Watch options\n */\ninterface WatchOptions {\n viewport$: Observable /* Viewport observable */\n}\n\n/**\n * Mount options\n */\ninterface MountOptions {\n viewport$: Observable /* Viewport observable */\n header$: Observable
    /* Header observable */\n main$: Observable
    /* Main area observable */\n}\n\n/* ----------------------------------------------------------------------------\n * Helper functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Compute whether the header is hidden\n *\n * If the user scrolls past a certain threshold, the header can be hidden when\n * scrolling down, and shown when scrolling up.\n *\n * @param options - Options\n *\n * @returns Toggle observable\n */\nfunction isHidden({ viewport$ }: WatchOptions): Observable {\n if (!feature(\"header.autohide\"))\n return of(false)\n\n /* Compute direction and turning point */\n const direction$ = viewport$\n .pipe(\n map(({ offset: { y } }) => y),\n bufferCount(2, 1),\n map(([a, b]) => [a < b, b] as const),\n distinctUntilKeyChanged(0)\n )\n\n /* Compute whether header should be hidden */\n const hidden$ = combineLatest([viewport$, direction$])\n .pipe(\n filter(([{ offset }, [, y]]) => Math.abs(y - offset.y) > 100),\n map(([, [direction]]) => direction),\n distinctUntilChanged()\n )\n\n /* Compute threshold for hiding */\n const search$ = watchToggle(\"search\")\n return combineLatest([viewport$, search$])\n .pipe(\n map(([{ offset }, search]) => offset.y > 400 && !search),\n distinctUntilChanged(),\n switchMap(active => active ? hidden$ : of(false)),\n startWith(false)\n )\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Watch header\n *\n * @param el - Header element\n * @param options - Options\n *\n * @returns Header observable\n */\nexport function watchHeader(\n el: HTMLElement, options: WatchOptions\n): Observable
    {\n return defer(() => combineLatest([\n watchElementSize(el),\n isHidden(options)\n ]))\n .pipe(\n map(([{ height }, hidden]) => ({\n height,\n hidden\n })),\n distinctUntilChanged((a, b) => (\n a.height === b.height &&\n a.hidden === b.hidden\n )),\n shareReplay(1)\n )\n}\n\n/**\n * Mount header\n *\n * This function manages the different states of the header, i.e. whether it's\n * hidden or rendered with a shadow. This depends heavily on the main area.\n *\n * @param el - Header element\n * @param options - Options\n *\n * @returns Header component observable\n */\nexport function mountHeader(\n el: HTMLElement, { header$, main$ }: MountOptions\n): Observable> {\n return defer(() => {\n const push$ = new Subject
    ()\n const done$ = push$.pipe(takeLast(1))\n push$\n .pipe(\n distinctUntilKeyChanged(\"active\"),\n combineLatestWith(header$)\n )\n .subscribe(([{ active }, { hidden }]) => {\n el.classList.toggle(\"md-header--shadow\", active && !hidden)\n el.hidden = hidden\n })\n\n /* Link to main area */\n main$.subscribe(push$)\n\n /* Create and return component */\n return header$\n .pipe(\n takeUntil(done$),\n map(state => ({ ref: el, ...state }))\n )\n })\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n EMPTY,\n Observable,\n Subject,\n defer,\n distinctUntilKeyChanged,\n finalize,\n map,\n tap\n} from \"rxjs\"\n\nimport {\n Viewport,\n getElementSize,\n getOptionalElement,\n watchViewportAt\n} from \"~/browser\"\n\nimport { Component } from \"../../_\"\nimport { Header } from \"../_\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Header\n */\nexport interface HeaderTitle {\n active: boolean /* Header title is active */\n}\n\n/* ----------------------------------------------------------------------------\n * Helper types\n * ------------------------------------------------------------------------- */\n\n/**\n * Watch options\n */\ninterface WatchOptions {\n viewport$: Observable /* Viewport observable */\n header$: Observable
    /* Header observable */\n}\n\n/**\n * Mount options\n */\ninterface MountOptions {\n viewport$: Observable /* Viewport observable */\n header$: Observable
    /* Header observable */\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Watch header title\n *\n * @param el - Heading element\n * @param options - Options\n *\n * @returns Header title observable\n */\nexport function watchHeaderTitle(\n el: HTMLElement, { viewport$, header$ }: WatchOptions\n): Observable {\n return watchViewportAt(el, { viewport$, header$ })\n .pipe(\n map(({ offset: { y } }) => {\n const { height } = getElementSize(el)\n return {\n active: y >= height\n }\n }),\n distinctUntilKeyChanged(\"active\")\n )\n}\n\n/**\n * Mount header title\n *\n * This function swaps the header title from the site title to the title of the\n * current page when the user scrolls past the first headline.\n *\n * @param el - Header title element\n * @param options - Options\n *\n * @returns Header title component observable\n */\nexport function mountHeaderTitle(\n el: HTMLElement, options: MountOptions\n): Observable> {\n return defer(() => {\n const push$ = new Subject()\n push$.subscribe(({ active }) => {\n el.classList.toggle(\"md-header__title--active\", active)\n })\n\n /* Obtain headline, if any */\n const heading = getOptionalElement(\"article h1\")\n if (typeof heading === \"undefined\")\n return EMPTY\n\n /* Create and return component */\n return watchHeaderTitle(heading, options)\n .pipe(\n tap(state => push$.next(state)),\n finalize(() => push$.complete()),\n map(state => ({ ref: el, ...state }))\n )\n })\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n Observable,\n combineLatest,\n distinctUntilChanged,\n distinctUntilKeyChanged,\n map,\n switchMap\n} from \"rxjs\"\n\nimport {\n Viewport,\n watchElementSize\n} from \"~/browser\"\n\nimport { Header } from \"../header\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Main area\n */\nexport interface Main {\n offset: number /* Main area top offset */\n height: number /* Main area visible height */\n active: boolean /* Main area is active */\n}\n\n/* ----------------------------------------------------------------------------\n * Helper types\n * ------------------------------------------------------------------------- */\n\n/**\n * Watch options\n */\ninterface WatchOptions {\n viewport$: Observable /* Viewport observable */\n header$: Observable
    /* Header observable */\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Watch main area\n *\n * This function returns an observable that computes the visual parameters of\n * the main area which depends on the viewport vertical offset and height, as\n * well as the height of the header element, if the header is fixed.\n *\n * @param el - Main area element\n * @param options - Options\n *\n * @returns Main area observable\n */\nexport function watchMain(\n el: HTMLElement, { viewport$, header$ }: WatchOptions\n): Observable
    {\n\n /* Compute necessary adjustment for header */\n const adjust$ = header$\n .pipe(\n map(({ height }) => height),\n distinctUntilChanged()\n )\n\n /* Compute the main area's top and bottom borders */\n const border$ = adjust$\n .pipe(\n switchMap(() => watchElementSize(el)\n .pipe(\n map(({ height }) => ({\n top: el.offsetTop,\n bottom: el.offsetTop + height\n })),\n distinctUntilKeyChanged(\"bottom\")\n )\n )\n )\n\n /* Compute the main area's offset, visible height and if we scrolled past */\n return combineLatest([adjust$, border$, viewport$])\n .pipe(\n map(([header, { top, bottom }, { offset: { y }, size: { height } }]) => {\n height = Math.max(0, height\n - Math.max(0, top - y, header)\n - Math.max(0, height + y - bottom)\n )\n return {\n offset: top - header,\n height,\n active: top - header <= y\n }\n }),\n distinctUntilChanged((a, b) => (\n a.offset === b.offset &&\n a.height === b.height &&\n a.active === b.active\n ))\n )\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n Observable,\n Subject,\n asyncScheduler,\n defer,\n finalize,\n fromEvent,\n map,\n mergeMap,\n observeOn,\n of,\n shareReplay,\n startWith,\n tap\n} from \"rxjs\"\n\nimport { getElements } from \"~/browser\"\n\nimport { Component } from \"../_\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Palette colors\n */\nexport interface PaletteColor {\n scheme?: string /* Color scheme */\n primary?: string /* Primary color */\n accent?: string /* Accent color */\n}\n\n/**\n * Palette\n */\nexport interface Palette {\n index: number /* Palette index */\n color: PaletteColor /* Palette colors */\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Watch color palette\n *\n * @param inputs - Color palette element\n *\n * @returns Color palette observable\n */\nexport function watchPalette(\n inputs: HTMLInputElement[]\n): Observable {\n const current = __md_get(\"__palette\") || {\n index: inputs.findIndex(input => matchMedia(\n input.getAttribute(\"data-md-color-media\")!\n ).matches)\n }\n\n /* Emit changes in color palette */\n return of(...inputs)\n .pipe(\n mergeMap(input => fromEvent(input, \"change\")\n .pipe(\n map(() => input)\n )\n ),\n startWith(inputs[Math.max(0, current.index)]),\n map(input => ({\n index: inputs.indexOf(input),\n color: {\n scheme: input.getAttribute(\"data-md-color-scheme\"),\n primary: input.getAttribute(\"data-md-color-primary\"),\n accent: input.getAttribute(\"data-md-color-accent\")\n }\n } as Palette)),\n shareReplay(1)\n )\n}\n\n/**\n * Mount color palette\n *\n * @param el - Color palette element\n *\n * @returns Color palette component observable\n */\nexport function mountPalette(\n el: HTMLElement\n): Observable> {\n return defer(() => {\n const push$ = new Subject()\n push$.subscribe(palette => {\n document.body.setAttribute(\"data-md-color-switching\", \"\")\n\n /* Set color palette */\n for (const [key, value] of Object.entries(palette.color))\n document.body.setAttribute(`data-md-color-${key}`, value)\n\n /* Toggle visibility */\n for (let index = 0; index < inputs.length; index++) {\n const label = inputs[index].nextElementSibling\n if (label instanceof HTMLElement)\n label.hidden = palette.index !== index\n }\n\n /* Persist preference in local storage */\n __md_set(\"__palette\", palette)\n })\n\n /* Revert transition durations after color switch */\n push$.pipe(observeOn(asyncScheduler))\n .subscribe(() => {\n document.body.removeAttribute(\"data-md-color-switching\")\n })\n\n /* Create and return component */\n const inputs = getElements(\"input\", el)\n return watchPalette(inputs)\n .pipe(\n tap(state => push$.next(state)),\n finalize(() => push$.complete()),\n map(state => ({ ref: el, ...state }))\n )\n })\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport ClipboardJS from \"clipboard\"\nimport {\n Observable,\n Subject,\n map,\n tap\n} from \"rxjs\"\n\nimport { translation } from \"~/_\"\nimport { getElement } from \"~/browser\"\n\n/* ----------------------------------------------------------------------------\n * Helper types\n * ------------------------------------------------------------------------- */\n\n/**\n * Setup options\n */\ninterface SetupOptions {\n alert$: Subject /* Alert subject */\n}\n\n/* ----------------------------------------------------------------------------\n * Helper functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Extract text to copy\n *\n * @param el - HTML element\n *\n * @returns Extracted text\n */\nfunction extract(el: HTMLElement): string {\n el.setAttribute(\"data-md-copying\", \"\")\n const text = el.innerText\n el.removeAttribute(\"data-md-copying\")\n return text\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Set up Clipboard.js integration\n *\n * @param options - Options\n */\nexport function setupClipboardJS(\n { alert$ }: SetupOptions\n): void {\n if (ClipboardJS.isSupported()) {\n new Observable(subscriber => {\n new ClipboardJS(\"[data-clipboard-target], [data-clipboard-text]\", {\n text: el => (\n el.getAttribute(\"data-clipboard-text\")! ||\n extract(getElement(\n el.getAttribute(\"data-clipboard-target\")!\n ))\n )\n })\n .on(\"success\", ev => subscriber.next(ev))\n })\n .pipe(\n tap(ev => {\n const trigger = ev.trigger as HTMLElement\n trigger.focus()\n }),\n map(() => translation(\"clipboard.copied\"))\n )\n .subscribe(alert$)\n }\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n EMPTY,\n Observable,\n catchError,\n defaultIfEmpty,\n map,\n of,\n tap\n} from \"rxjs\"\n\nimport { configuration } from \"~/_\"\nimport { getElements, requestXML } from \"~/browser\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Sitemap, i.e. a list of URLs\n */\nexport type Sitemap = string[]\n\n/* ----------------------------------------------------------------------------\n * Helper functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Preprocess a list of URLs\n *\n * This function replaces the `site_url` in the sitemap with the actual base\n * URL, to allow instant loading to work in occasions like Netlify previews.\n *\n * @param urls - URLs\n *\n * @returns URL path parts\n */\nfunction preprocess(urls: Sitemap): Sitemap {\n if (urls.length < 2)\n return [\"\"]\n\n /* Take the first two URLs and remove everything after the last slash */\n const [root, next] = [...urls]\n .sort((a, b) => a.length - b.length)\n .map(url => url.replace(/[^/]+$/, \"\"))\n\n /* Compute common prefix */\n let index = 0\n if (root === next)\n index = root.length\n else\n while (root.charCodeAt(index) === next.charCodeAt(index))\n index++\n\n /* Remove common prefix and return in original order */\n return urls.map(url => url.replace(root.slice(0, index), \"\"))\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Fetch the sitemap for the given base URL\n *\n * @param base - Base URL\n *\n * @returns Sitemap observable\n */\nexport function fetchSitemap(base?: URL): Observable {\n const cached = __md_get(\"__sitemap\", sessionStorage, base)\n if (cached) {\n return of(cached)\n } else {\n const config = configuration()\n return requestXML(new URL(\"sitemap.xml\", base || config.base))\n .pipe(\n map(sitemap => preprocess(getElements(\"loc\", sitemap)\n .map(node => node.textContent!)\n )),\n catchError(() => EMPTY), // @todo refactor instant loading\n defaultIfEmpty([]),\n tap(sitemap => __md_set(\"__sitemap\", sitemap, sessionStorage, base))\n )\n }\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n EMPTY,\n NEVER,\n Observable,\n Subject,\n bufferCount,\n catchError,\n concatMap,\n debounceTime,\n distinctUntilChanged,\n distinctUntilKeyChanged,\n filter,\n fromEvent,\n map,\n merge,\n of,\n sample,\n share,\n skip,\n skipUntil,\n switchMap\n} from \"rxjs\"\n\nimport { configuration, feature } from \"~/_\"\nimport {\n Viewport,\n ViewportOffset,\n getElements,\n getOptionalElement,\n request,\n setLocation,\n setLocationHash\n} from \"~/browser\"\nimport { getComponentElement } from \"~/components\"\nimport { h } from \"~/utilities\"\n\nimport { fetchSitemap } from \"../sitemap\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * History state\n */\nexport interface HistoryState {\n url: URL /* State URL */\n offset?: ViewportOffset /* State viewport offset */\n}\n\n/* ----------------------------------------------------------------------------\n * Helper types\n * ------------------------------------------------------------------------- */\n\n/**\n * Setup options\n */\ninterface SetupOptions {\n document$: Subject /* Document subject */\n location$: Subject /* Location subject */\n viewport$: Observable /* Viewport observable */\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Set up instant loading\n *\n * When fetching, theoretically, we could use `responseType: \"document\"`, but\n * since all MkDocs links are relative, we need to make sure that the current\n * location matches the document we just loaded. Otherwise any relative links\n * in the document could use the old location.\n *\n * This is the reason why we need to synchronize history events and the process\n * of fetching the document for navigation changes (except `popstate` events):\n *\n * 1. Fetch document via `XMLHTTPRequest`\n * 2. Set new location via `history.pushState`\n * 3. Parse and emit fetched document\n *\n * For `popstate` events, we must not use `history.pushState`, or the forward\n * history will be irreversibly overwritten. In case the request fails, the\n * location change is dispatched regularly.\n *\n * @param options - Options\n */\nexport function setupInstantLoading(\n { document$, location$, viewport$ }: SetupOptions\n): void {\n const config = configuration()\n if (location.protocol === \"file:\")\n return\n\n /* Disable automatic scroll restoration */\n if (\"scrollRestoration\" in history) {\n history.scrollRestoration = \"manual\"\n\n /* Hack: ensure that reloads restore viewport offset */\n fromEvent(window, \"beforeunload\")\n .subscribe(() => {\n history.scrollRestoration = \"auto\"\n })\n }\n\n /* Hack: ensure absolute favicon link to omit 404s when switching */\n const favicon = getOptionalElement(\"link[rel=icon]\")\n if (typeof favicon !== \"undefined\")\n favicon.href = favicon.href\n\n /* Intercept internal navigation */\n const push$ = fetchSitemap()\n .pipe(\n map(paths => paths.map(path => `${new URL(path, config.base)}`)),\n switchMap(urls => fromEvent(document.body, \"click\")\n .pipe(\n filter(ev => !ev.metaKey && !ev.ctrlKey),\n switchMap(ev => {\n if (ev.target instanceof Element) {\n const el = ev.target.closest(\"a\")\n if (el && !el.target) {\n const url = new URL(el.href)\n\n /* Canonicalize URL */\n url.search = \"\"\n url.hash = \"\"\n\n /* Check if URL should be intercepted */\n if (\n url.pathname !== location.pathname &&\n urls.includes(url.toString())\n ) {\n ev.preventDefault()\n return of({\n url: new URL(el.href)\n })\n }\n }\n }\n return NEVER\n })\n )\n ),\n share()\n )\n\n /* Intercept history back and forward */\n const pop$ = fromEvent(window, \"popstate\")\n .pipe(\n filter(ev => ev.state !== null),\n map(ev => ({\n url: new URL(location.href),\n offset: ev.state\n })),\n share()\n )\n\n /* Emit location change */\n merge(push$, pop$)\n .pipe(\n distinctUntilChanged((a, b) => a.url.href === b.url.href),\n map(({ url }) => url)\n )\n .subscribe(location$)\n\n /* Fetch document via `XMLHTTPRequest` */\n const response$ = location$\n .pipe(\n distinctUntilKeyChanged(\"pathname\"),\n switchMap(url => request(url.href)\n .pipe(\n catchError(() => {\n setLocation(url)\n return NEVER\n })\n )\n ),\n share()\n )\n\n /* Set new location via `history.pushState` */\n push$\n .pipe(\n sample(response$)\n )\n .subscribe(({ url }) => {\n history.pushState({}, \"\", `${url}`)\n })\n\n /* Parse and emit fetched document */\n const dom = new DOMParser()\n response$\n .pipe(\n switchMap(res => res.text()),\n map(res => dom.parseFromString(res, \"text/html\"))\n )\n .subscribe(document$)\n\n /* Replace meta tags and components */\n document$\n .pipe(\n skip(1)\n )\n .subscribe(replacement => {\n for (const selector of [\n\n /* Meta tags */\n \"title\",\n \"link[rel=canonical]\",\n \"meta[name=author]\",\n \"meta[name=description]\",\n\n /* Components */\n \"[data-md-component=announce]\",\n \"[data-md-component=container]\",\n \"[data-md-component=header-topic]\",\n \"[data-md-component=outdated]\",\n \"[data-md-component=logo]\",\n \"[data-md-component=skip]\",\n ...feature(\"navigation.tabs.sticky\")\n ? [\"[data-md-component=tabs]\"]\n : []\n ]) {\n const source = getOptionalElement(selector)\n const target = getOptionalElement(selector, replacement)\n if (\n typeof source !== \"undefined\" &&\n typeof target !== \"undefined\"\n ) {\n source.replaceWith(target)\n }\n }\n })\n\n /* Re-evaluate scripts */\n document$\n .pipe(\n skip(1),\n map(() => getComponentElement(\"container\")),\n switchMap(el => getElements(\"script\", el)),\n concatMap(el => {\n const script = h(\"script\")\n if (el.src) {\n for (const name of el.getAttributeNames())\n script.setAttribute(name, el.getAttribute(name)!)\n el.replaceWith(script)\n\n /* Complete when script is loaded */\n return new Observable(observer => {\n script.onload = () => observer.complete()\n })\n\n /* Complete immediately */\n } else {\n script.textContent = el.textContent\n el.replaceWith(script)\n return EMPTY\n }\n })\n )\n .subscribe()\n\n /* Emit history state change */\n merge(push$, pop$)\n .pipe(\n sample(document$)\n )\n .subscribe(({ url, offset }) => {\n if (url.hash && !offset) {\n setLocationHash(url.hash)\n } else {\n window.scrollTo(0, offset?.y || 0)\n }\n })\n\n /* Debounce update of viewport offset */\n viewport$\n .pipe(\n skipUntil(push$),\n debounceTime(250),\n distinctUntilKeyChanged(\"offset\")\n )\n .subscribe(({ offset }) => {\n history.replaceState(offset, \"\")\n })\n\n /* Set viewport offset from history */\n merge(push$, pop$)\n .pipe(\n bufferCount(2, 1),\n filter(([a, b]) => a.url.pathname === b.url.pathname),\n map(([, state]) => state)\n )\n .subscribe(({ offset }) => {\n window.scrollTo(0, offset?.y || 0)\n })\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport escapeHTML from \"escape-html\"\n\nimport { SearchIndexDocument } from \"../_\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Search document\n */\nexport interface SearchDocument extends SearchIndexDocument {\n parent?: SearchIndexDocument /* Parent article */\n}\n\n/* ------------------------------------------------------------------------- */\n\n/**\n * Search document mapping\n */\nexport type SearchDocumentMap = Map\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Create a search document mapping\n *\n * @param docs - Search index documents\n *\n * @returns Search document map\n */\nexport function setupSearchDocumentMap(\n docs: SearchIndexDocument[]\n): SearchDocumentMap {\n const documents = new Map()\n const parents = new Set()\n for (const doc of docs) {\n const [path, hash] = doc.location.split(\"#\")\n\n /* Extract location, title and tags */\n const location = doc.location\n const title = doc.title\n const tags = doc.tags\n\n /* Escape and cleanup text */\n const text = escapeHTML(doc.text)\n .replace(/\\s+(?=[,.:;!?])/g, \"\")\n .replace(/\\s+/g, \" \")\n\n /* Handle section */\n if (hash) {\n const parent = documents.get(path)!\n\n /* Ignore first section, override article */\n if (!parents.has(parent)) {\n parent.title = doc.title\n parent.text = text\n\n /* Remember that we processed the article */\n parents.add(parent)\n\n /* Add subsequent section */\n } else {\n documents.set(location, {\n location,\n title,\n text,\n parent\n })\n }\n\n /* Add article */\n } else {\n documents.set(location, {\n location,\n title,\n text,\n ...tags && { tags }\n })\n }\n }\n return documents\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport escapeHTML from \"escape-html\"\n\nimport { SearchIndexConfig } from \"../_\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Search highlight function\n *\n * @param value - Value\n *\n * @returns Highlighted value\n */\nexport type SearchHighlightFn = (value: string) => string\n\n/**\n * Search highlight factory function\n *\n * @param query - Query value\n *\n * @returns Search highlight function\n */\nexport type SearchHighlightFactoryFn = (query: string) => SearchHighlightFn\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Create a search highlighter\n *\n * @param config - Search index configuration\n * @param escape - Whether to escape HTML\n *\n * @returns Search highlight factory function\n */\nexport function setupSearchHighlighter(\n config: SearchIndexConfig, escape: boolean\n): SearchHighlightFactoryFn {\n const separator = new RegExp(config.separator, \"img\")\n const highlight = (_: unknown, data: string, term: string) => {\n return `${data}${term}`\n }\n\n /* Return factory function */\n return (query: string) => {\n query = query\n .replace(/[\\s*+\\-:~^]+/g, \" \")\n .trim()\n\n /* Create search term match expression */\n const match = new RegExp(`(^|${config.separator})(${\n query\n .replace(/[|\\\\{}()[\\]^$+*?.-]/g, \"\\\\$&\")\n .replace(separator, \"|\")\n })`, \"img\")\n\n /* Highlight string value */\n return value => (\n escape\n ? escapeHTML(value)\n : value\n )\n .replace(match, highlight)\n .replace(/<\\/mark>(\\s+)]*>/img, \"$1\")\n }\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Search transformation function\n *\n * @param value - Query value\n *\n * @returns Transformed query value\n */\nexport type SearchTransformFn = (value: string) => string\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Default transformation function\n *\n * 1. Search for terms in quotation marks and prepend a `+` modifier to denote\n * that the resulting document must contain all terms, converting the query\n * to an `AND` query (as opposed to the default `OR` behavior). While users\n * may expect terms enclosed in quotation marks to map to span queries, i.e.\n * for which order is important, Lunr.js doesn't support them, so the best\n * we can do is to convert the terms to an `AND` query.\n *\n * 2. Replace control characters which are not located at the beginning of the\n * query or preceded by white space, or are not followed by a non-whitespace\n * character or are at the end of the query string. Furthermore, filter\n * unmatched quotation marks.\n *\n * 3. Trim excess whitespace from left and right.\n *\n * @param query - Query value\n *\n * @returns Transformed query value\n */\nexport function defaultTransform(query: string): string {\n return query\n .split(/\"([^\"]+)\"/g) /* => 1 */\n .map((terms, index) => index & 1\n ? terms.replace(/^\\b|^(?![^\\x00-\\x7F]|$)|\\s+/g, \" +\")\n : terms\n )\n .join(\"\")\n .replace(/\"|(?:^|\\s+)[*+\\-:^~]+(?=\\s+|$)/g, \"\") /* => 2 */\n .trim() /* => 3 */\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A RTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport { SearchIndex, SearchResult } from \"../../_\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Search message type\n */\nexport const enum SearchMessageType {\n SETUP, /* Search index setup */\n READY, /* Search index ready */\n QUERY, /* Search query */\n RESULT /* Search results */\n}\n\n/* ------------------------------------------------------------------------- */\n\n/**\n * Message containing the data necessary to setup the search index\n */\nexport interface SearchSetupMessage {\n type: SearchMessageType.SETUP /* Message type */\n data: SearchIndex /* Message data */\n}\n\n/**\n * Message indicating the search index is ready\n */\nexport interface SearchReadyMessage {\n type: SearchMessageType.READY /* Message type */\n}\n\n/**\n * Message containing a search query\n */\nexport interface SearchQueryMessage {\n type: SearchMessageType.QUERY /* Message type */\n data: string /* Message data */\n}\n\n/**\n * Message containing results for a search query\n */\nexport interface SearchResultMessage {\n type: SearchMessageType.RESULT /* Message type */\n data: SearchResult /* Message data */\n}\n\n/* ------------------------------------------------------------------------- */\n\n/**\n * Message exchanged with the search worker\n */\nexport type SearchMessage =\n | SearchSetupMessage\n | SearchReadyMessage\n | SearchQueryMessage\n | SearchResultMessage\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Type guard for search setup messages\n *\n * @param message - Search worker message\n *\n * @returns Test result\n */\nexport function isSearchSetupMessage(\n message: SearchMessage\n): message is SearchSetupMessage {\n return message.type === SearchMessageType.SETUP\n}\n\n/**\n * Type guard for search ready messages\n *\n * @param message - Search worker message\n *\n * @returns Test result\n */\nexport function isSearchReadyMessage(\n message: SearchMessage\n): message is SearchReadyMessage {\n return message.type === SearchMessageType.READY\n}\n\n/**\n * Type guard for search query messages\n *\n * @param message - Search worker message\n *\n * @returns Test result\n */\nexport function isSearchQueryMessage(\n message: SearchMessage\n): message is SearchQueryMessage {\n return message.type === SearchMessageType.QUERY\n}\n\n/**\n * Type guard for search result messages\n *\n * @param message - Search worker message\n *\n * @returns Test result\n */\nexport function isSearchResultMessage(\n message: SearchMessage\n): message is SearchResultMessage {\n return message.type === SearchMessageType.RESULT\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A RTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n ObservableInput,\n Subject,\n from,\n map,\n share\n} from \"rxjs\"\n\nimport { configuration, feature, translation } from \"~/_\"\nimport { WorkerHandler, watchWorker } from \"~/browser\"\n\nimport { SearchIndex } from \"../../_\"\nimport {\n SearchOptions,\n SearchPipeline\n} from \"../../options\"\nimport {\n SearchMessage,\n SearchMessageType,\n SearchSetupMessage,\n isSearchResultMessage\n} from \"../message\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Search worker\n */\nexport type SearchWorker = WorkerHandler\n\n/* ----------------------------------------------------------------------------\n * Helper functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Set up search index\n *\n * @param data - Search index\n *\n * @returns Search index\n */\nfunction setupSearchIndex({ config, docs }: SearchIndex): SearchIndex {\n\n /* Override default language with value from translation */\n if (config.lang.length === 1 && config.lang[0] === \"en\")\n config.lang = [\n translation(\"search.config.lang\")\n ]\n\n /* Override default separator with value from translation */\n if (config.separator === \"[\\\\s\\\\-]+\")\n config.separator = translation(\"search.config.separator\")\n\n /* Set pipeline from translation */\n const pipeline = translation(\"search.config.pipeline\")\n .split(/\\s*,\\s*/)\n .filter(Boolean) as SearchPipeline\n\n /* Determine search options */\n const options: SearchOptions = {\n pipeline,\n suggestions: feature(\"search.suggest\")\n }\n\n /* Return search index after defaulting */\n return { config, docs, options }\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Set up search worker\n *\n * This function creates a web worker to set up and query the search index,\n * which is done using Lunr.js. The index must be passed as an observable to\n * enable hacks like _localsearch_ via search index embedding as JSON.\n *\n * @param url - Worker URL\n * @param index - Search index observable input\n *\n * @returns Search worker\n */\nexport function setupSearchWorker(\n url: string, index: ObservableInput\n): SearchWorker {\n const config = configuration()\n const worker = new Worker(url)\n\n /* Create communication channels and resolve relative links */\n const tx$ = new Subject()\n const rx$ = watchWorker(worker, { tx$ })\n .pipe(\n map(message => {\n if (isSearchResultMessage(message)) {\n for (const result of message.data.items)\n for (const document of result)\n document.location = `${new URL(document.location, config.base)}`\n }\n return message\n }),\n share()\n )\n\n /* Set up search index */\n from(index)\n .pipe(\n map(data => ({\n type: SearchMessageType.SETUP,\n data: setupSearchIndex(data)\n } as SearchSetupMessage))\n )\n .subscribe(tx$.next.bind(tx$))\n\n /* Return search worker */\n return { tx$, rx$ }\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n EMPTY,\n Subject,\n catchError,\n combineLatest,\n filter,\n fromEvent,\n map,\n of,\n switchMap,\n withLatestFrom\n} from \"rxjs\"\n\nimport { configuration } from \"~/_\"\nimport {\n getElement,\n getLocation,\n requestJSON,\n setLocation\n} from \"~/browser\"\nimport { getComponentElements } from \"~/components\"\nimport {\n Version,\n renderVersionSelector\n} from \"~/templates\"\n\nimport { fetchSitemap } from \"../sitemap\"\n\n/* ----------------------------------------------------------------------------\n * Helper types\n * ------------------------------------------------------------------------- */\n\n/**\n * Setup options\n */\ninterface SetupOptions {\n document$: Subject /* Document subject */\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Set up version selector\n *\n * @param options - Options\n */\nexport function setupVersionSelector(\n { document$ }: SetupOptions\n): void {\n const config = configuration()\n const versions$ = requestJSON(\n new URL(\"../versions.json\", config.base)\n )\n .pipe(\n catchError(() => EMPTY) // @todo refactor instant loading\n )\n\n /* Determine current version */\n const current$ = versions$\n .pipe(\n map(versions => {\n const [, current] = config.base.match(/([^/]+)\\/?$/)!\n return versions.find(({ version, aliases }) => (\n version === current || aliases.includes(current)\n )) || versions[0]\n })\n )\n\n /* Intercept inter-version navigation */\n versions$\n .pipe(\n map(versions => new Map(versions.map(version => [\n `${new URL(`../${version.version}/`, config.base)}`,\n version\n ]))),\n switchMap(urls => fromEvent(document.body, \"click\")\n .pipe(\n filter(ev => !ev.metaKey && !ev.ctrlKey),\n withLatestFrom(current$),\n switchMap(([ev, current]) => {\n if (ev.target instanceof Element) {\n const el = ev.target.closest(\"a\")\n if (el && !el.target && urls.has(el.href)) {\n const url = el.href\n // This is a temporary hack to detect if a version inside the\n // version selector or on another part of the site was clicked.\n // If we're inside the version selector, we definitely want to\n // find the same page, as we might have different deployments\n // due to aliases. However, if we're outside the version\n // selector, we must abort here, because we might otherwise\n // interfere with instant loading. We need to refactor this\n // at some point together with instant loading.\n //\n // See https://github.com/squidfunk/mkdocs-material/issues/4012\n if (!ev.target.closest(\".md-version\")) {\n const version = urls.get(url)!\n if (version === current)\n return EMPTY\n }\n ev.preventDefault()\n return of(url)\n }\n }\n return EMPTY\n }),\n switchMap(url => {\n const { version } = urls.get(url)!\n return fetchSitemap(new URL(url))\n .pipe(\n map(sitemap => {\n const location = getLocation()\n const path = location.href.replace(config.base, \"\")\n return sitemap.includes(path.split(\"#\")[0])\n ? new URL(`../${version}/${path}`, config.base)\n : new URL(url)\n })\n )\n })\n )\n )\n )\n .subscribe(url => setLocation(url))\n\n /* Render version selector and warning */\n combineLatest([versions$, current$])\n .subscribe(([versions, current]) => {\n const topic = getElement(\".md-header__topic\")\n topic.appendChild(renderVersionSelector(versions, current))\n })\n\n /* Integrate outdated version banner with instant loading */\n document$.pipe(switchMap(() => current$))\n .subscribe(current => {\n\n /* Check if version state was already determined */\n let outdated = __md_get(\"__outdated\", sessionStorage)\n if (outdated === null) {\n const latest = config.version?.default || \"latest\"\n outdated = !current.aliases.includes(latest)\n\n /* Persist version state in session storage */\n __md_set(\"__outdated\", outdated, sessionStorage)\n }\n\n /* Unhide outdated version banner */\n if (outdated)\n for (const warning of getComponentElements(\"outdated\"))\n warning.hidden = false\n })\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n Observable,\n Subject,\n combineLatest,\n delay,\n distinctUntilChanged,\n distinctUntilKeyChanged,\n filter,\n finalize,\n fromEvent,\n map,\n merge,\n share,\n shareReplay,\n startWith,\n take,\n takeLast,\n takeUntil,\n tap\n} from \"rxjs\"\n\nimport { translation } from \"~/_\"\nimport {\n getLocation,\n setToggle,\n watchElementFocus,\n watchToggle\n} from \"~/browser\"\nimport {\n SearchMessageType,\n SearchQueryMessage,\n SearchWorker,\n defaultTransform,\n isSearchReadyMessage\n} from \"~/integrations\"\n\nimport { Component } from \"../../_\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Search query\n */\nexport interface SearchQuery {\n value: string /* Query value */\n focus: boolean /* Query focus */\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Watch search query\n *\n * Note that the focus event which triggers re-reading the current query value\n * is delayed by `1ms` so the input's empty state is allowed to propagate.\n *\n * @param el - Search query element\n * @param worker - Search worker\n *\n * @returns Search query observable\n */\nexport function watchSearchQuery(\n el: HTMLInputElement, { rx$ }: SearchWorker\n): Observable {\n const fn = __search?.transform || defaultTransform\n\n /* Immediately show search dialog */\n const { searchParams } = getLocation()\n if (searchParams.has(\"q\"))\n setToggle(\"search\", true)\n\n /* Intercept query parameter (deep link) */\n const param$ = rx$\n .pipe(\n filter(isSearchReadyMessage),\n take(1),\n map(() => searchParams.get(\"q\") || \"\")\n )\n\n /* Remove query parameter when search is closed */\n watchToggle(\"search\")\n .pipe(\n filter(active => !active),\n take(1)\n )\n .subscribe(() => {\n const url = new URL(location.href)\n url.searchParams.delete(\"q\")\n history.replaceState({}, \"\", `${url}`)\n })\n\n /* Set query from parameter */\n param$.subscribe(value => { // TODO: not ideal - find a better way\n if (value) {\n el.value = value\n el.focus()\n }\n })\n\n /* Intercept focus and input events */\n const focus$ = watchElementFocus(el)\n const value$ = merge(\n fromEvent(el, \"keyup\"),\n fromEvent(el, \"focus\").pipe(delay(1)),\n param$\n )\n .pipe(\n map(() => fn(el.value)),\n startWith(\"\"),\n distinctUntilChanged(),\n )\n\n /* Combine into single observable */\n return combineLatest([value$, focus$])\n .pipe(\n map(([value, focus]) => ({ value, focus })),\n shareReplay(1)\n )\n}\n\n/**\n * Mount search query\n *\n * @param el - Search query element\n * @param worker - Search worker\n *\n * @returns Search query component observable\n */\nexport function mountSearchQuery(\n el: HTMLInputElement, { tx$, rx$ }: SearchWorker\n): Observable> {\n const push$ = new Subject()\n const done$ = push$.pipe(takeLast(1))\n\n /* Handle value changes */\n push$\n .pipe(\n distinctUntilKeyChanged(\"value\"),\n map(({ value }): SearchQueryMessage => ({\n type: SearchMessageType.QUERY,\n data: value\n }))\n )\n .subscribe(tx$.next.bind(tx$))\n\n /* Handle focus changes */\n push$\n .pipe(\n distinctUntilKeyChanged(\"focus\")\n )\n .subscribe(({ focus }) => {\n if (focus) {\n setToggle(\"search\", focus)\n el.placeholder = \"\"\n } else {\n el.placeholder = translation(\"search.placeholder\")\n }\n })\n\n /* Handle reset */\n fromEvent(el.form!, \"reset\")\n .pipe(\n takeUntil(done$)\n )\n .subscribe(() => el.focus())\n\n /* Create and return component */\n return watchSearchQuery(el, { tx$, rx$ })\n .pipe(\n tap(state => push$.next(state)),\n finalize(() => push$.complete()),\n map(state => ({ ref: el, ...state })),\n share()\n )\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n Observable,\n Subject,\n bufferCount,\n filter,\n finalize,\n map,\n merge,\n of,\n skipUntil,\n switchMap,\n take,\n tap,\n withLatestFrom,\n zipWith\n} from \"rxjs\"\n\nimport { translation } from \"~/_\"\nimport {\n getElement,\n watchElementBoundary\n} from \"~/browser\"\nimport {\n SearchResult,\n SearchWorker,\n isSearchReadyMessage,\n isSearchResultMessage\n} from \"~/integrations\"\nimport { renderSearchResultItem } from \"~/templates\"\nimport { round } from \"~/utilities\"\n\nimport { Component } from \"../../_\"\nimport { SearchQuery } from \"../query\"\n\n/* ----------------------------------------------------------------------------\n * Helper types\n * ------------------------------------------------------------------------- */\n\n/**\n * Mount options\n */\ninterface MountOptions {\n query$: Observable /* Search query observable */\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Mount search result list\n *\n * This function performs a lazy rendering of the search results, depending on\n * the vertical offset of the search result container.\n *\n * @param el - Search result list element\n * @param worker - Search worker\n * @param options - Options\n *\n * @returns Search result list component observable\n */\nexport function mountSearchResult(\n el: HTMLElement, { rx$ }: SearchWorker, { query$ }: MountOptions\n): Observable> {\n const push$ = new Subject()\n const boundary$ = watchElementBoundary(el.parentElement!)\n .pipe(\n filter(Boolean)\n )\n\n /* Retrieve nested components */\n const meta = getElement(\":scope > :first-child\", el)\n const list = getElement(\":scope > :last-child\", el)\n\n /* Wait until search is ready */\n const ready$ = rx$\n .pipe(\n filter(isSearchReadyMessage),\n take(1)\n )\n\n /* Update search result metadata */\n push$\n .pipe(\n withLatestFrom(query$),\n skipUntil(ready$)\n )\n .subscribe(([{ items }, { value }]) => {\n if (value) {\n switch (items.length) {\n\n /* No results */\n case 0:\n meta.textContent = translation(\"search.result.none\")\n break\n\n /* One result */\n case 1:\n meta.textContent = translation(\"search.result.one\")\n break\n\n /* Multiple result */\n default:\n meta.textContent = translation(\n \"search.result.other\",\n round(items.length)\n )\n }\n } else {\n meta.textContent = translation(\"search.result.placeholder\")\n }\n })\n\n /* Update search result list */\n push$\n .pipe(\n tap(() => list.innerHTML = \"\"),\n switchMap(({ items }) => merge(\n of(...items.slice(0, 10)),\n of(...items.slice(10))\n .pipe(\n bufferCount(4),\n zipWith(boundary$),\n switchMap(([chunk]) => chunk)\n )\n ))\n )\n .subscribe(result => list.appendChild(\n renderSearchResultItem(result)\n ))\n\n /* Filter search result message */\n const result$ = rx$\n .pipe(\n filter(isSearchResultMessage),\n map(({ data }) => data)\n )\n\n /* Create and return component */\n return result$\n .pipe(\n tap(state => push$.next(state)),\n finalize(() => push$.complete()),\n map(state => ({ ref: el, ...state }))\n )\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n Observable,\n Subject,\n finalize,\n fromEvent,\n map,\n tap\n} from \"rxjs\"\n\nimport { getLocation } from \"~/browser\"\n\nimport { Component } from \"../../_\"\nimport { SearchQuery } from \"../query\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Search sharing\n */\nexport interface SearchShare {\n url: URL /* Deep link for sharing */\n}\n\n/* ----------------------------------------------------------------------------\n * Helper types\n * ------------------------------------------------------------------------- */\n\n/**\n * Watch options\n */\ninterface WatchOptions {\n query$: Observable /* Search query observable */\n}\n\n/**\n * Mount options\n */\ninterface MountOptions {\n query$: Observable /* Search query observable */\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Mount search sharing\n *\n * @param _el - Search sharing element\n * @param options - Options\n *\n * @returns Search sharing observable\n */\nexport function watchSearchShare(\n _el: HTMLElement, { query$ }: WatchOptions\n): Observable {\n return query$\n .pipe(\n map(({ value }) => {\n const url = getLocation()\n url.hash = \"\"\n url.searchParams.delete(\"h\")\n url.searchParams.set(\"q\", value)\n return { url }\n })\n )\n}\n\n/**\n * Mount search sharing\n *\n * @param el - Search sharing element\n * @param options - Options\n *\n * @returns Search sharing component observable\n */\nexport function mountSearchShare(\n el: HTMLAnchorElement, options: MountOptions\n): Observable> {\n const push$ = new Subject()\n push$.subscribe(({ url }) => {\n el.setAttribute(\"data-clipboard-text\", el.href)\n el.href = `${url}`\n })\n\n /* Prevent following of link */\n fromEvent(el, \"click\")\n .subscribe(ev => ev.preventDefault())\n\n /* Create and return component */\n return watchSearchShare(el, options)\n .pipe(\n tap(state => push$.next(state)),\n finalize(() => push$.complete()),\n map(state => ({ ref: el, ...state }))\n )\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n Observable,\n Subject,\n asyncScheduler,\n combineLatestWith,\n distinctUntilChanged,\n filter,\n finalize,\n fromEvent,\n map,\n merge,\n observeOn,\n tap\n} from \"rxjs\"\n\nimport { Keyboard } from \"~/browser\"\nimport {\n SearchResult,\n SearchWorker,\n isSearchResultMessage\n} from \"~/integrations\"\n\nimport { Component, getComponentElement } from \"../../_\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Search suggestions\n */\nexport interface SearchSuggest {}\n\n/* ----------------------------------------------------------------------------\n * Helper types\n * ------------------------------------------------------------------------- */\n\n/**\n * Mount options\n */\ninterface MountOptions {\n keyboard$: Observable /* Keyboard observable */\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Mount search suggestions\n *\n * This function will perform a lazy rendering of the search results, depending\n * on the vertical offset of the search result container.\n *\n * @param el - Search result list element\n * @param worker - Search worker\n * @param options - Options\n *\n * @returns Search result list component observable\n */\nexport function mountSearchSuggest(\n el: HTMLElement, { rx$ }: SearchWorker, { keyboard$ }: MountOptions\n): Observable> {\n const push$ = new Subject()\n\n /* Retrieve query component and track all changes */\n const query = getComponentElement(\"search-query\")\n const query$ = merge(\n fromEvent(query, \"keydown\"),\n fromEvent(query, \"focus\")\n )\n .pipe(\n observeOn(asyncScheduler),\n map(() => query.value),\n distinctUntilChanged(),\n )\n\n /* Update search suggestions */\n push$\n .pipe(\n combineLatestWith(query$),\n map(([{ suggestions }, value]) => {\n const words = value.split(/([\\s-]+)/)\n if (suggestions?.length && words[words.length - 1]) {\n const last = suggestions[suggestions.length - 1]\n if (last.startsWith(words[words.length - 1]))\n words[words.length - 1] = last\n } else {\n words.length = 0\n }\n return words\n })\n )\n .subscribe(words => el.innerHTML = words\n .join(\"\")\n .replace(/\\s/g, \" \")\n )\n\n /* Set up search keyboard handlers */\n keyboard$\n .pipe(\n filter(({ mode }) => mode === \"search\")\n )\n .subscribe(key => {\n switch (key.type) {\n\n /* Right arrow: accept current suggestion */\n case \"ArrowRight\":\n if (\n el.innerText.length &&\n query.selectionStart === query.value.length\n )\n query.value = el.innerText\n break\n }\n })\n\n /* Filter search result message */\n const result$ = rx$\n .pipe(\n filter(isSearchResultMessage),\n map(({ data }) => data)\n )\n\n /* Create and return component */\n return result$\n .pipe(\n tap(state => push$.next(state)),\n finalize(() => push$.complete()),\n map(() => ({ ref: el }))\n )\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n NEVER,\n Observable,\n ObservableInput,\n filter,\n merge,\n mergeWith,\n sample,\n take\n} from \"rxjs\"\n\nimport { configuration } from \"~/_\"\nimport {\n Keyboard,\n getActiveElement,\n getElements,\n setToggle\n} from \"~/browser\"\nimport {\n SearchIndex,\n SearchResult,\n isSearchQueryMessage,\n isSearchReadyMessage,\n setupSearchWorker\n} from \"~/integrations\"\n\nimport {\n Component,\n getComponentElement,\n getComponentElements\n} from \"../../_\"\nimport {\n SearchQuery,\n mountSearchQuery\n} from \"../query\"\nimport { mountSearchResult } from \"../result\"\nimport {\n SearchShare,\n mountSearchShare\n} from \"../share\"\nimport {\n SearchSuggest,\n mountSearchSuggest\n} from \"../suggest\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Search\n */\nexport type Search =\n | SearchQuery\n | SearchResult\n | SearchShare\n | SearchSuggest\n\n/* ----------------------------------------------------------------------------\n * Helper types\n * ------------------------------------------------------------------------- */\n\n/**\n * Mount options\n */\ninterface MountOptions {\n index$: ObservableInput /* Search index observable */\n keyboard$: Observable /* Keyboard observable */\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Mount search\n *\n * This function sets up the search functionality, including the underlying\n * web worker and all keyboard bindings.\n *\n * @param el - Search element\n * @param options - Options\n *\n * @returns Search component observable\n */\nexport function mountSearch(\n el: HTMLElement, { index$, keyboard$ }: MountOptions\n): Observable> {\n const config = configuration()\n try {\n const url = __search?.worker || config.search\n const worker = setupSearchWorker(url, index$)\n\n /* Retrieve query and result components */\n const query = getComponentElement(\"search-query\", el)\n const result = getComponentElement(\"search-result\", el)\n\n /* Re-emit query when search is ready */\n const { tx$, rx$ } = worker\n tx$\n .pipe(\n filter(isSearchQueryMessage),\n sample(rx$.pipe(filter(isSearchReadyMessage))),\n take(1)\n )\n .subscribe(tx$.next.bind(tx$))\n\n /* Set up search keyboard handlers */\n keyboard$\n .pipe(\n filter(({ mode }) => mode === \"search\")\n )\n .subscribe(key => {\n const active = getActiveElement()\n switch (key.type) {\n\n /* Enter: go to first (best) result */\n case \"Enter\":\n if (active === query) {\n const anchors = new Map()\n for (const anchor of getElements(\n \":first-child [href]\", result\n )) {\n const article = anchor.firstElementChild!\n anchors.set(anchor, parseFloat(\n article.getAttribute(\"data-md-score\")!\n ))\n }\n\n /* Go to result with highest score, if any */\n if (anchors.size) {\n const [[best]] = [...anchors].sort(([, a], [, b]) => b - a)\n best.click()\n }\n\n /* Otherwise omit form submission */\n key.claim()\n }\n break\n\n /* Escape or Tab: close search */\n case \"Escape\":\n case \"Tab\":\n setToggle(\"search\", false)\n query.blur()\n break\n\n /* Vertical arrows: select previous or next search result */\n case \"ArrowUp\":\n case \"ArrowDown\":\n if (typeof active === \"undefined\") {\n query.focus()\n } else {\n const els = [query, ...getElements(\n \":not(details) > [href], summary, details[open] [href]\",\n result\n )]\n const i = Math.max(0, (\n Math.max(0, els.indexOf(active)) + els.length + (\n key.type === \"ArrowUp\" ? -1 : +1\n )\n ) % els.length)\n els[i].focus()\n }\n\n /* Prevent scrolling of page */\n key.claim()\n break\n\n /* All other keys: hand to search query */\n default:\n if (query !== getActiveElement())\n query.focus()\n }\n })\n\n /* Set up global keyboard handlers */\n keyboard$\n .pipe(\n filter(({ mode }) => mode === \"global\"),\n )\n .subscribe(key => {\n switch (key.type) {\n\n /* Open search and select query */\n case \"f\":\n case \"s\":\n case \"/\":\n query.focus()\n query.select()\n\n /* Prevent scrolling of page */\n key.claim()\n break\n }\n })\n\n /* Create and return component */\n const query$ = mountSearchQuery(query, worker)\n const result$ = mountSearchResult(result, worker, { query$ })\n return merge(query$, result$)\n .pipe(\n mergeWith(\n\n /* Search sharing */\n ...getComponentElements(\"search-share\", el)\n .map(child => mountSearchShare(child, { query$ })),\n\n /* Search suggestions */\n ...getComponentElements(\"search-suggest\", el)\n .map(child => mountSearchSuggest(child, worker, { keyboard$ }))\n )\n )\n\n /* Gracefully handle broken search */\n } catch (err) {\n el.hidden = true\n return NEVER\n }\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n Observable,\n ObservableInput,\n combineLatest,\n filter,\n map,\n startWith\n} from \"rxjs\"\n\nimport { getLocation } from \"~/browser\"\nimport {\n SearchIndex,\n setupSearchHighlighter\n} from \"~/integrations\"\nimport { h } from \"~/utilities\"\n\nimport { Component } from \"../../_\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Search highlighting\n */\nexport interface SearchHighlight {\n nodes: Map /* Map of replacements */\n}\n\n/* ----------------------------------------------------------------------------\n * Helper types\n * ------------------------------------------------------------------------- */\n\n/**\n * Mount options\n */\ninterface MountOptions {\n index$: ObservableInput /* Search index observable */\n location$: Observable /* Location observable */\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Mount search highlighting\n *\n * @param el - Content element\n * @param options - Options\n *\n * @returns Search highlighting component observable\n */\nexport function mountSearchHiglight(\n el: HTMLElement, { index$, location$ }: MountOptions\n): Observable> {\n return combineLatest([\n index$,\n location$\n .pipe(\n startWith(getLocation()),\n filter(url => !!url.searchParams.get(\"h\"))\n )\n ])\n .pipe(\n map(([index, url]) => setupSearchHighlighter(index.config, true)(\n url.searchParams.get(\"h\")!\n )),\n map(fn => {\n const nodes = new Map()\n\n /* Traverse text nodes and collect matches */\n const it = document.createNodeIterator(el, NodeFilter.SHOW_TEXT)\n for (let node = it.nextNode(); node; node = it.nextNode()) {\n if (node.parentElement?.offsetHeight) {\n const original = node.textContent!\n const replaced = fn(original)\n if (replaced.length > original.length)\n nodes.set(node as ChildNode, replaced)\n }\n }\n\n /* Replace original nodes with matches */\n for (const [node, text] of nodes) {\n const { childNodes } = h(\"span\", null, text)\n node.replaceWith(...Array.from(childNodes))\n }\n\n /* Return component */\n return { ref: el, nodes }\n })\n )\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n Observable,\n Subject,\n animationFrameScheduler,\n auditTime,\n combineLatest,\n defer,\n distinctUntilChanged,\n finalize,\n map,\n observeOn,\n take,\n tap,\n withLatestFrom\n} from \"rxjs\"\n\nimport {\n Viewport,\n getElement,\n getElementContainer,\n getElementOffset,\n getElementSize,\n getElements\n} from \"~/browser\"\n\nimport { Component } from \"../_\"\nimport { Header } from \"../header\"\nimport { Main } from \"../main\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Sidebar\n */\nexport interface Sidebar {\n height: number /* Sidebar height */\n locked: boolean /* Sidebar is locked */\n}\n\n/* ----------------------------------------------------------------------------\n * Helper types\n * ------------------------------------------------------------------------- */\n\n/**\n * Watch options\n */\ninterface WatchOptions {\n viewport$: Observable /* Viewport observable */\n main$: Observable
    /* Main area observable */\n}\n\n/**\n * Mount options\n */\ninterface MountOptions {\n viewport$: Observable /* Viewport observable */\n header$: Observable
    /* Header observable */\n main$: Observable
    /* Main area observable */\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Watch sidebar\n *\n * This function returns an observable that computes the visual parameters of\n * the sidebar which depends on the vertical viewport offset, as well as the\n * height of the main area. When the page is scrolled beyond the header, the\n * sidebar is locked and fills the remaining space.\n *\n * @param el - Sidebar element\n * @param options - Options\n *\n * @returns Sidebar observable\n */\nexport function watchSidebar(\n el: HTMLElement, { viewport$, main$ }: WatchOptions\n): Observable {\n const parent = el.parentElement!\n const adjust =\n parent.offsetTop -\n parent.parentElement!.offsetTop\n\n /* Compute the sidebar's available height and if it should be locked */\n return combineLatest([main$, viewport$])\n .pipe(\n map(([{ offset, height }, { offset: { y } }]) => {\n height = height\n + Math.min(adjust, Math.max(0, y - offset))\n - adjust\n return {\n height,\n locked: y >= offset + adjust\n }\n }),\n distinctUntilChanged((a, b) => (\n a.height === b.height &&\n a.locked === b.locked\n ))\n )\n}\n\n/**\n * Mount sidebar\n *\n * This function doesn't set the height of the actual sidebar, but of its first\n * child \u2013 the `.md-sidebar__scrollwrap` element in order to mitigiate jittery\n * sidebars when the footer is scrolled into view. At some point we switched\n * from `absolute` / `fixed` positioning to `sticky` positioning, significantly\n * reducing jitter in some browsers (respectively Firefox and Safari) when\n * scrolling from the top. However, top-aligned sticky positioning means that\n * the sidebar snaps to the bottom when the end of the container is reached.\n * This is what leads to the mentioned jitter, as the sidebar's height may be\n * updated too slowly.\n *\n * This behaviour can be mitigiated by setting the height of the sidebar to `0`\n * while preserving the padding, and the height on its first element.\n *\n * @param el - Sidebar element\n * @param options - Options\n *\n * @returns Sidebar component observable\n */\nexport function mountSidebar(\n el: HTMLElement, { header$, ...options }: MountOptions\n): Observable> {\n const inner = getElement(\".md-sidebar__scrollwrap\", el)\n const { y } = getElementOffset(inner)\n return defer(() => {\n const push$ = new Subject()\n push$\n .pipe(\n auditTime(0, animationFrameScheduler),\n withLatestFrom(header$)\n )\n .subscribe({\n\n /* Handle emission */\n next([{ height }, { height: offset }]) {\n inner.style.height = `${height - 2 * y}px`\n el.style.top = `${offset}px`\n },\n\n /* Handle complete */\n complete() {\n inner.style.height = \"\"\n el.style.top = \"\"\n }\n })\n\n /* Bring active item into view on initial load */\n push$\n .pipe(\n observeOn(animationFrameScheduler),\n take(1)\n )\n .subscribe(() => {\n for (const item of getElements(\".md-nav__link--active[href]\", el)) {\n const container = getElementContainer(item)\n if (typeof container !== \"undefined\") {\n const offset = item.offsetTop - container.offsetTop\n const { height } = getElementSize(container)\n container.scrollTo({\n top: offset - height / 2\n })\n }\n }\n })\n\n /* Create and return component */\n return watchSidebar(el, options)\n .pipe(\n tap(state => push$.next(state)),\n finalize(() => push$.complete()),\n map(state => ({ ref: el, ...state }))\n )\n })\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport { Repo, User } from \"github-types\"\nimport {\n EMPTY,\n Observable,\n catchError,\n defaultIfEmpty,\n map,\n zip\n} from \"rxjs\"\n\nimport { requestJSON } from \"~/browser\"\n\nimport { SourceFacts } from \"../_\"\n\n/* ----------------------------------------------------------------------------\n * Helper types\n * ------------------------------------------------------------------------- */\n\n/**\n * GitHub release (partial)\n */\ninterface Release {\n tag_name: string /* Tag name */\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Fetch GitHub repository facts\n *\n * @param user - GitHub user or organization\n * @param repo - GitHub repository\n *\n * @returns Repository facts observable\n */\nexport function fetchSourceFactsFromGitHub(\n user: string, repo?: string\n): Observable {\n if (typeof repo !== \"undefined\") {\n const url = `https://api.github.com/repos/${user}/${repo}`\n return zip(\n\n /* Fetch version */\n requestJSON(`${url}/releases/latest`)\n .pipe(\n catchError(() => EMPTY), // @todo refactor instant loading\n map(release => ({\n version: release.tag_name\n })),\n defaultIfEmpty({})\n ),\n\n /* Fetch stars and forks */\n requestJSON(url)\n .pipe(\n catchError(() => EMPTY), // @todo refactor instant loading\n map(info => ({\n stars: info.stargazers_count,\n forks: info.forks_count\n })),\n defaultIfEmpty({})\n )\n )\n .pipe(\n map(([release, info]) => ({ ...release, ...info }))\n )\n\n /* User or organization */\n } else {\n const url = `https://api.github.com/users/${user}`\n return requestJSON(url)\n .pipe(\n map(info => ({\n repositories: info.public_repos\n })),\n defaultIfEmpty({})\n )\n }\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport { ProjectSchema } from \"gitlab\"\nimport {\n EMPTY,\n Observable,\n catchError,\n defaultIfEmpty,\n map\n} from \"rxjs\"\n\nimport { requestJSON } from \"~/browser\"\n\nimport { SourceFacts } from \"../_\"\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Fetch GitLab repository facts\n *\n * @param base - GitLab base\n * @param project - GitLab project\n *\n * @returns Repository facts observable\n */\nexport function fetchSourceFactsFromGitLab(\n base: string, project: string\n): Observable {\n const url = `https://${base}/api/v4/projects/${encodeURIComponent(project)}`\n return requestJSON(url)\n .pipe(\n catchError(() => EMPTY), // @todo refactor instant loading\n map(({ star_count, forks_count }) => ({\n stars: star_count,\n forks: forks_count\n })),\n defaultIfEmpty({})\n )\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport { EMPTY, Observable } from \"rxjs\"\n\nimport { fetchSourceFactsFromGitHub } from \"../github\"\nimport { fetchSourceFactsFromGitLab } from \"../gitlab\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Repository facts for repositories\n */\nexport interface RepositoryFacts {\n stars?: number /* Number of stars */\n forks?: number /* Number of forks */\n version?: string /* Latest version */\n}\n\n/**\n * Repository facts for organizations\n */\nexport interface OrganizationFacts {\n repositories?: number /* Number of repositories */\n}\n\n/* ------------------------------------------------------------------------- */\n\n/**\n * Repository facts\n */\nexport type SourceFacts =\n | RepositoryFacts\n | OrganizationFacts\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Fetch repository facts\n *\n * @param url - Repository URL\n *\n * @returns Repository facts observable\n */\nexport function fetchSourceFacts(\n url: string\n): Observable {\n\n /* Try to match GitHub repository */\n let match = url.match(/^.+github\\.com\\/([^/]+)\\/?([^/]+)?/i)\n if (match) {\n const [, user, repo] = match\n return fetchSourceFactsFromGitHub(user, repo)\n }\n\n /* Try to match GitLab repository */\n match = url.match(/^.+?([^/]*gitlab[^/]+)\\/(.+?)\\/?$/i)\n if (match) {\n const [, base, slug] = match\n return fetchSourceFactsFromGitLab(base, slug)\n }\n\n /* Fallback */\n return EMPTY\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n EMPTY,\n Observable,\n Subject,\n catchError,\n defer,\n filter,\n finalize,\n map,\n of,\n shareReplay,\n tap\n} from \"rxjs\"\n\nimport { getElement } from \"~/browser\"\nimport { ConsentDefaults } from \"~/components/consent\"\nimport { renderSourceFacts } from \"~/templates\"\n\nimport {\n Component,\n getComponentElements\n} from \"../../_\"\nimport {\n SourceFacts,\n fetchSourceFacts\n} from \"../facts\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Repository information\n */\nexport interface Source {\n facts: SourceFacts /* Repository facts */\n}\n\n/* ----------------------------------------------------------------------------\n * Data\n * ------------------------------------------------------------------------- */\n\n/**\n * Repository information observable\n */\nlet fetch$: Observable\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Watch repository information\n *\n * This function tries to read the repository facts from session storage, and\n * if unsuccessful, fetches them from the underlying provider.\n *\n * @param el - Repository information element\n *\n * @returns Repository information observable\n */\nexport function watchSource(\n el: HTMLAnchorElement\n): Observable {\n return fetch$ ||= defer(() => {\n const cached = __md_get(\"__source\", sessionStorage)\n if (cached) {\n return of(cached)\n } else {\n\n /* Check if consent is configured and was given */\n const els = getComponentElements(\"consent\")\n if (els.length) {\n const consent = __md_get(\"__consent\")\n if (!(consent && consent.github))\n return EMPTY\n }\n\n /* Fetch repository facts */\n return fetchSourceFacts(el.href)\n .pipe(\n tap(facts => __md_set(\"__source\", facts, sessionStorage))\n )\n }\n })\n .pipe(\n catchError(() => EMPTY),\n filter(facts => Object.keys(facts).length > 0),\n map(facts => ({ facts })),\n shareReplay(1)\n )\n}\n\n/**\n * Mount repository information\n *\n * @param el - Repository information element\n *\n * @returns Repository information component observable\n */\nexport function mountSource(\n el: HTMLAnchorElement\n): Observable> {\n const inner = getElement(\":scope > :last-child\", el)\n return defer(() => {\n const push$ = new Subject()\n push$.subscribe(({ facts }) => {\n inner.appendChild(renderSourceFacts(facts))\n inner.classList.add(\"md-source__repository--active\")\n })\n\n /* Create and return component */\n return watchSource(el)\n .pipe(\n tap(state => push$.next(state)),\n finalize(() => push$.complete()),\n map(state => ({ ref: el, ...state }))\n )\n })\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n Observable,\n Subject,\n defer,\n distinctUntilKeyChanged,\n finalize,\n map,\n of,\n switchMap,\n tap\n} from \"rxjs\"\n\nimport { feature } from \"~/_\"\nimport {\n Viewport,\n watchElementSize,\n watchViewportAt\n} from \"~/browser\"\n\nimport { Component } from \"../_\"\nimport { Header } from \"../header\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Navigation tabs\n */\nexport interface Tabs {\n hidden: boolean /* Navigation tabs are hidden */\n}\n\n/* ----------------------------------------------------------------------------\n * Helper types\n * ------------------------------------------------------------------------- */\n\n/**\n * Watch options\n */\ninterface WatchOptions {\n viewport$: Observable /* Viewport observable */\n header$: Observable
    /* Header observable */\n}\n\n/**\n * Mount options\n */\ninterface MountOptions {\n viewport$: Observable /* Viewport observable */\n header$: Observable
    /* Header observable */\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Watch navigation tabs\n *\n * @param el - Navigation tabs element\n * @param options - Options\n *\n * @returns Navigation tabs observable\n */\nexport function watchTabs(\n el: HTMLElement, { viewport$, header$ }: WatchOptions\n): Observable {\n return watchElementSize(document.body)\n .pipe(\n switchMap(() => watchViewportAt(el, { header$, viewport$ })),\n map(({ offset: { y } }) => {\n return {\n hidden: y >= 10\n }\n }),\n distinctUntilKeyChanged(\"hidden\")\n )\n}\n\n/**\n * Mount navigation tabs\n *\n * This function hides the navigation tabs when scrolling past the threshold\n * and makes them reappear in a nice CSS animation when scrolling back up.\n *\n * @param el - Navigation tabs element\n * @param options - Options\n *\n * @returns Navigation tabs component observable\n */\nexport function mountTabs(\n el: HTMLElement, options: MountOptions\n): Observable> {\n return defer(() => {\n const push$ = new Subject()\n push$.subscribe({\n\n /* Handle emission */\n next({ hidden }) {\n el.hidden = hidden\n },\n\n /* Handle complete */\n complete() {\n el.hidden = false\n }\n })\n\n /* Create and return component */\n return (\n feature(\"navigation.tabs.sticky\")\n ? of({ hidden: false })\n : watchTabs(el, options)\n )\n .pipe(\n tap(state => push$.next(state)),\n finalize(() => push$.complete()),\n map(state => ({ ref: el, ...state }))\n )\n })\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n Observable,\n Subject,\n bufferCount,\n combineLatestWith,\n debounceTime,\n defer,\n distinctUntilChanged,\n distinctUntilKeyChanged,\n filter,\n finalize,\n map,\n merge,\n of,\n repeat,\n scan,\n share,\n skip,\n startWith,\n switchMap,\n takeLast,\n takeUntil,\n tap,\n withLatestFrom\n} from \"rxjs\"\n\nimport { feature } from \"~/_\"\nimport {\n Viewport,\n getElement,\n getElementContainer,\n getElementSize,\n getElements,\n getLocation,\n getOptionalElement,\n watchElementSize\n} from \"~/browser\"\n\nimport {\n Component,\n getComponentElement\n} from \"../_\"\nimport { Header } from \"../header\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Table of contents\n */\nexport interface TableOfContents {\n prev: HTMLAnchorElement[][] /* Anchors (previous) */\n next: HTMLAnchorElement[][] /* Anchors (next) */\n}\n\n/* ----------------------------------------------------------------------------\n * Helper types\n * ------------------------------------------------------------------------- */\n\n/**\n * Watch options\n */\ninterface WatchOptions {\n viewport$: Observable /* Viewport observable */\n header$: Observable
    /* Header observable */\n}\n\n/**\n * Mount options\n */\ninterface MountOptions {\n viewport$: Observable /* Viewport observable */\n header$: Observable
    /* Header observable */\n target$: Observable /* Location target observable */\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Watch table of contents\n *\n * This is effectively a scroll spy implementation which will account for the\n * fixed header and automatically re-calculate anchor offsets when the viewport\n * is resized. The returned observable will only emit if the table of contents\n * needs to be repainted.\n *\n * This implementation tracks an anchor element's entire path starting from its\n * level up to the top-most anchor element, e.g. `[h3, h2, h1]`. Although the\n * Material theme currently doesn't make use of this information, it enables\n * the styling of the entire hierarchy through customization.\n *\n * Note that the current anchor is the last item of the `prev` anchor list.\n *\n * @param el - Table of contents element\n * @param options - Options\n *\n * @returns Table of contents observable\n */\nexport function watchTableOfContents(\n el: HTMLElement, { viewport$, header$ }: WatchOptions\n): Observable {\n const table = new Map()\n\n /* Compute anchor-to-target mapping */\n const anchors = getElements(\"[href^=\\\\#]\", el)\n for (const anchor of anchors) {\n const id = decodeURIComponent(anchor.hash.substring(1))\n const target = getOptionalElement(`[id=\"${id}\"]`)\n if (typeof target !== \"undefined\")\n table.set(anchor, target)\n }\n\n /* Compute necessary adjustment for header */\n const adjust$ = header$\n .pipe(\n distinctUntilKeyChanged(\"height\"),\n map(({ height }) => {\n const main = getComponentElement(\"main\")\n const grid = getElement(\":scope > :first-child\", main)\n return height + 0.8 * (\n grid.offsetTop -\n main.offsetTop\n )\n }),\n share()\n )\n\n /* Compute partition of previous and next anchors */\n const partition$ = watchElementSize(document.body)\n .pipe(\n distinctUntilKeyChanged(\"height\"),\n\n /* Build index to map anchor paths to vertical offsets */\n switchMap(body => defer(() => {\n let path: HTMLAnchorElement[] = []\n return of([...table].reduce((index, [anchor, target]) => {\n while (path.length) {\n const last = table.get(path[path.length - 1])!\n if (last.tagName >= target.tagName) {\n path.pop()\n } else {\n break\n }\n }\n\n /* If the current anchor is hidden, continue with its parent */\n let offset = target.offsetTop\n while (!offset && target.parentElement) {\n target = target.parentElement\n offset = target.offsetTop\n }\n\n /* Map reversed anchor path to vertical offset */\n return index.set(\n [...path = [...path, anchor]].reverse(),\n offset\n )\n }, new Map()))\n })\n .pipe(\n\n /* Sort index by vertical offset (see https://bit.ly/30z6QSO) */\n map(index => new Map([...index].sort(([, a], [, b]) => a - b))),\n combineLatestWith(adjust$),\n\n /* Re-compute partition when viewport offset changes */\n switchMap(([index, adjust]) => viewport$\n .pipe(\n scan(([prev, next], { offset: { y }, size }) => {\n const last = y + size.height >= Math.floor(body.height)\n\n /* Look forward */\n while (next.length) {\n const [, offset] = next[0]\n if (offset - adjust < y || last) {\n prev = [...prev, next.shift()!]\n } else {\n break\n }\n }\n\n /* Look backward */\n while (prev.length) {\n const [, offset] = prev[prev.length - 1]\n if (offset - adjust >= y && !last) {\n next = [prev.pop()!, ...next]\n } else {\n break\n }\n }\n\n /* Return partition */\n return [prev, next]\n }, [[], [...index]]),\n distinctUntilChanged((a, b) => (\n a[0] === b[0] &&\n a[1] === b[1]\n ))\n )\n )\n )\n )\n )\n\n /* Compute and return anchor list migrations */\n return partition$\n .pipe(\n map(([prev, next]) => ({\n prev: prev.map(([path]) => path),\n next: next.map(([path]) => path)\n })),\n\n /* Extract anchor list migrations */\n startWith({ prev: [], next: [] }),\n bufferCount(2, 1),\n map(([a, b]) => {\n\n /* Moving down */\n if (a.prev.length < b.prev.length) {\n return {\n prev: b.prev.slice(Math.max(0, a.prev.length - 1), b.prev.length),\n next: []\n }\n\n /* Moving up */\n } else {\n return {\n prev: b.prev.slice(-1),\n next: b.next.slice(0, b.next.length - a.next.length)\n }\n }\n })\n )\n}\n\n/* ------------------------------------------------------------------------- */\n\n/**\n * Mount table of contents\n *\n * @param el - Table of contents element\n * @param options - Options\n *\n * @returns Table of contents component observable\n */\nexport function mountTableOfContents(\n el: HTMLElement, { viewport$, header$, target$ }: MountOptions\n): Observable> {\n return defer(() => {\n const push$ = new Subject()\n const done$ = push$.pipe(takeLast(1))\n push$.subscribe(({ prev, next }) => {\n\n /* Look forward */\n for (const [anchor] of next) {\n anchor.classList.remove(\"md-nav__link--passed\")\n anchor.classList.remove(\"md-nav__link--active\")\n }\n\n /* Look backward */\n for (const [index, [anchor]] of prev.entries()) {\n anchor.classList.add(\"md-nav__link--passed\")\n anchor.classList.toggle(\n \"md-nav__link--active\",\n index === prev.length - 1\n )\n }\n })\n\n /* Set up following, if enabled */\n if (feature(\"toc.follow\")) {\n\n /* Toggle smooth scrolling only for anchor clicks */\n const smooth$ = merge(\n viewport$.pipe(debounceTime(1), map(() => undefined)),\n viewport$.pipe(debounceTime(250), map(() => \"smooth\" as const))\n )\n\n /* Bring active anchor into view */\n push$\n .pipe(\n filter(({ prev }) => prev.length > 0),\n withLatestFrom(smooth$)\n )\n .subscribe(([{ prev }, behavior]) => {\n const [anchor] = prev[prev.length - 1]\n if (anchor.offsetHeight) {\n\n /* Retrieve overflowing container and scroll */\n const container = getElementContainer(anchor)\n if (typeof container !== \"undefined\") {\n const offset = anchor.offsetTop - container.offsetTop\n const { height } = getElementSize(container)\n container.scrollTo({\n top: offset - height / 2,\n behavior\n })\n }\n }\n })\n }\n\n /* Set up anchor tracking, if enabled */\n if (feature(\"navigation.tracking\"))\n viewport$\n .pipe(\n takeUntil(done$),\n distinctUntilKeyChanged(\"offset\"),\n debounceTime(250),\n skip(1),\n takeUntil(target$.pipe(skip(1))),\n repeat({ delay: 250 }),\n withLatestFrom(push$)\n )\n .subscribe(([, { prev }]) => {\n const url = getLocation()\n\n /* Set hash fragment to active anchor */\n const anchor = prev[prev.length - 1]\n if (anchor && anchor.length) {\n const [active] = anchor\n const { hash } = new URL(active.href)\n if (url.hash !== hash) {\n url.hash = hash\n history.replaceState({}, \"\", `${url}`)\n }\n\n /* Reset anchor when at the top */\n } else {\n url.hash = \"\"\n history.replaceState({}, \"\", `${url}`)\n }\n })\n\n /* Create and return component */\n return watchTableOfContents(el, { viewport$, header$ })\n .pipe(\n tap(state => push$.next(state)),\n finalize(() => push$.complete()),\n map(state => ({ ref: el, ...state }))\n )\n })\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n Observable,\n Subject,\n bufferCount,\n combineLatest,\n distinctUntilChanged,\n distinctUntilKeyChanged,\n endWith,\n finalize,\n map,\n repeat,\n skip,\n takeLast,\n takeUntil,\n tap\n} from \"rxjs\"\n\nimport { Viewport } from \"~/browser\"\n\nimport { Component } from \"../_\"\nimport { Header } from \"../header\"\nimport { Main } from \"../main\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Back-to-top button\n */\nexport interface BackToTop {\n hidden: boolean /* Back-to-top button is hidden */\n}\n\n/* ----------------------------------------------------------------------------\n * Helper types\n * ------------------------------------------------------------------------- */\n\n/**\n * Watch options\n */\ninterface WatchOptions {\n viewport$: Observable /* Viewport observable */\n main$: Observable
    /* Main area observable */\n target$: Observable /* Location target observable */\n}\n\n/**\n * Mount options\n */\ninterface MountOptions {\n viewport$: Observable /* Viewport observable */\n header$: Observable
    /* Header observable */\n main$: Observable
    /* Main area observable */\n target$: Observable /* Location target observable */\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Watch back-to-top\n *\n * @param _el - Back-to-top element\n * @param options - Options\n *\n * @returns Back-to-top observable\n */\nexport function watchBackToTop(\n _el: HTMLElement, { viewport$, main$, target$ }: WatchOptions\n): Observable {\n\n /* Compute direction */\n const direction$ = viewport$\n .pipe(\n map(({ offset: { y } }) => y),\n bufferCount(2, 1),\n map(([a, b]) => a > b && b > 0),\n distinctUntilChanged()\n )\n\n /* Compute whether main area is active */\n const active$ = main$\n .pipe(\n map(({ active }) => active)\n )\n\n /* Compute threshold for hiding */\n return combineLatest([active$, direction$])\n .pipe(\n map(([active, direction]) => !(active && direction)),\n distinctUntilChanged(),\n takeUntil(target$.pipe(skip(1))),\n endWith(true),\n repeat({ delay: 250 }),\n map(hidden => ({ hidden }))\n )\n}\n\n/* ------------------------------------------------------------------------- */\n\n/**\n * Mount back-to-top\n *\n * @param el - Back-to-top element\n * @param options - Options\n *\n * @returns Back-to-top component observable\n */\nexport function mountBackToTop(\n el: HTMLElement, { viewport$, header$, main$, target$ }: MountOptions\n): Observable> {\n const push$ = new Subject()\n const done$ = push$.pipe(takeLast(1))\n push$.subscribe({\n\n /* Handle emission */\n next({ hidden }) {\n el.hidden = hidden\n if (hidden) {\n el.setAttribute(\"tabindex\", \"-1\")\n el.blur()\n } else {\n el.removeAttribute(\"tabindex\")\n }\n },\n\n /* Handle complete */\n complete() {\n el.style.top = \"\"\n el.hidden = true\n el.removeAttribute(\"tabindex\")\n }\n })\n\n /* Watch header height */\n header$\n .pipe(\n takeUntil(done$),\n distinctUntilKeyChanged(\"height\")\n )\n .subscribe(({ height }) => {\n el.style.top = `${height + 16}px`\n })\n\n /* Create and return component */\n return watchBackToTop(el, { viewport$, main$, target$ })\n .pipe(\n tap(state => push$.next(state)),\n finalize(() => push$.complete()),\n map(state => ({ ref: el, ...state }))\n )\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n Observable,\n fromEvent,\n map,\n mergeMap,\n switchMap,\n takeWhile,\n tap,\n withLatestFrom\n} from \"rxjs\"\n\nimport { getElements } from \"~/browser\"\n\n/* ----------------------------------------------------------------------------\n * Helper types\n * ------------------------------------------------------------------------- */\n\n/**\n * Patch options\n */\ninterface PatchOptions {\n document$: Observable /* Document observable */\n tablet$: Observable /* Media tablet observable */\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Patch indeterminate checkboxes\n *\n * This function replaces the indeterminate \"pseudo state\" with the actual\n * indeterminate state, which is used to keep navigation always expanded.\n *\n * @param options - Options\n */\nexport function patchIndeterminate(\n { document$, tablet$ }: PatchOptions\n): void {\n document$\n .pipe(\n switchMap(() => getElements(\n // @todo `data-md-state` is deprecated and removed in v9\n \".md-toggle--indeterminate, [data-md-state=indeterminate]\"\n )),\n tap(el => {\n el.indeterminate = true\n el.checked = false\n }),\n mergeMap(el => fromEvent(el, \"change\")\n .pipe(\n takeWhile(() => el.classList.contains(\"md-toggle--indeterminate\")),\n map(() => el)\n )\n ),\n withLatestFrom(tablet$)\n )\n .subscribe(([el, tablet]) => {\n el.classList.remove(\"md-toggle--indeterminate\")\n if (tablet)\n el.checked = false\n })\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n Observable,\n filter,\n fromEvent,\n map,\n mergeMap,\n switchMap,\n tap\n} from \"rxjs\"\n\nimport { getElements } from \"~/browser\"\n\n/* ----------------------------------------------------------------------------\n * Helper types\n * ------------------------------------------------------------------------- */\n\n/**\n * Patch options\n */\ninterface PatchOptions {\n document$: Observable /* Document observable */\n}\n\n/* ----------------------------------------------------------------------------\n * Helper functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Check whether the given device is an Apple device\n *\n * @returns Test result\n */\nfunction isAppleDevice(): boolean {\n return /(iPad|iPhone|iPod)/.test(navigator.userAgent)\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Patch all elements with `data-md-scrollfix` attributes\n *\n * This is a year-old patch which ensures that overflow scrolling works at the\n * top and bottom of containers on iOS by ensuring a `1px` scroll offset upon\n * the start of a touch event.\n *\n * @see https://bit.ly/2SCtAOO - Original source\n *\n * @param options - Options\n */\nexport function patchScrollfix(\n { document$ }: PatchOptions\n): void {\n document$\n .pipe(\n switchMap(() => getElements(\"[data-md-scrollfix]\")),\n tap(el => el.removeAttribute(\"data-md-scrollfix\")),\n filter(isAppleDevice),\n mergeMap(el => fromEvent(el, \"touchstart\")\n .pipe(\n map(() => el)\n )\n )\n )\n .subscribe(el => {\n const top = el.scrollTop\n\n /* We're at the top of the container */\n if (top === 0) {\n el.scrollTop = 1\n\n /* We're at the bottom of the container */\n } else if (top + el.offsetHeight === el.scrollHeight) {\n el.scrollTop = top - 1\n }\n })\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n Observable,\n combineLatest,\n delay,\n map,\n of,\n switchMap,\n withLatestFrom\n} from \"rxjs\"\n\nimport {\n Viewport,\n watchToggle\n} from \"~/browser\"\n\n/* ----------------------------------------------------------------------------\n * Helper types\n * ------------------------------------------------------------------------- */\n\n/**\n * Patch options\n */\ninterface PatchOptions {\n viewport$: Observable /* Viewport observable */\n tablet$: Observable /* Media tablet observable */\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Patch the document body to lock when search is open\n *\n * For mobile and tablet viewports, the search is rendered full screen, which\n * leads to scroll leaking when at the top or bottom of the search result. This\n * function locks the body when the search is in full screen mode, and restores\n * the scroll position when leaving.\n *\n * @param options - Options\n */\nexport function patchScrolllock(\n { viewport$, tablet$ }: PatchOptions\n): void {\n combineLatest([watchToggle(\"search\"), tablet$])\n .pipe(\n map(([active, tablet]) => active && !tablet),\n switchMap(active => of(active)\n .pipe(\n delay(active ? 400 : 100)\n )\n ),\n withLatestFrom(viewport$)\n )\n .subscribe(([active, { offset: { y }}]) => {\n if (active) {\n document.body.setAttribute(\"data-md-scrolllock\", \"\")\n document.body.style.top = `-${y}px`\n } else {\n const value = -1 * parseInt(document.body.style.top, 10)\n document.body.removeAttribute(\"data-md-scrolllock\")\n document.body.style.top = \"\"\n if (value)\n window.scrollTo(0, value)\n }\n })\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\n/* ----------------------------------------------------------------------------\n * Polyfills\n * ------------------------------------------------------------------------- */\n\n/* Polyfill `Object.entries` */\nif (!Object.entries)\n Object.entries = function (obj: object) {\n const data: [string, string][] = []\n for (const key of Object.keys(obj))\n // @ts-expect-error - ignore property access warning\n data.push([key, obj[key]])\n\n /* Return entries */\n return data\n }\n\n/* Polyfill `Object.values` */\nif (!Object.values)\n Object.values = function (obj: object) {\n const data: string[] = []\n for (const key of Object.keys(obj))\n // @ts-expect-error - ignore property access warning\n 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IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n NEVER,\n ReplaySubject,\n delay,\n distinctUntilChanged,\n filter,\n finalize,\n fromEvent,\n interval,\n merge,\n mergeMap,\n of,\n repeat,\n switchMap,\n take,\n takeUntil,\n tap,\n withLatestFrom\n} from \"rxjs\"\n\n/* ----------------------------------------------------------------------------\n * Script\n * ------------------------------------------------------------------------- */\n\n/* Append container for instances */\nconst container = document.createElement(\"div\")\ndocument.body.appendChild(container)\n\n/* Append button next to palette toggle */\nconst header = document.querySelector(\".md-header__option\")\nif (header) {\n const button = document.createElement(\"button\")\n button.className = \"md-header__button md-icon \u1D34\u2092\u1D34\u2092\u1D34\u2092__button\"\n if (header.parentElement)\n header.parentElement.insertBefore(button, header)\n\n /* Toggle animation */\n const on$ = new ReplaySubject(1)\n on$\n .pipe(\n distinctUntilChanged()\n )\n .subscribe(on => {\n sessionStorage.setItem(\"\u1D34\u2092\u1D34\u2092\u1D34\u2092\", `${on}`)\n button.hidden = !on\n })\n\n /* Load state from session storage */\n on$.next(JSON.parse(sessionStorage.getItem(\"\u1D34\u2092\u1D34\u2092\u1D34\u2092\") || \"true\"))\n fromEvent(button, \"click\")\n .pipe(\n withLatestFrom(on$)\n )\n .subscribe(([, on]) => on$.next(!on))\n\n /* Generate instances */\n interval(250)\n .pipe(\n takeUntil(on$.pipe(filter(on => !on))),\n take(75),\n repeat({ delay: () => on$.pipe(filter(on => on)) }),\n mergeMap(() => {\n const instance = document.createElement(\"div\")\n instance.className = \"\u1D34\u2092\u1D34\u2092\u1D34\u2092\"\n instance.ariaHidden = \"true\"\n 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nu når og også om op os over på selv sig sin sine sit skal skulle som sådan thi til ud under var vi vil ville vor være været".split(" ")),e.Pipeline.registerFunction(e.da.stopWordFilter,"stopWordFilter-da")}}); \ No newline at end of file diff --git a/pr-preview/pr-11/assets/javascripts/lunr/min/lunr.de.min.js b/pr-preview/pr-11/assets/javascripts/lunr/min/lunr.de.min.js deleted file mode 100644 index f3b5c10..0000000 --- a/pr-preview/pr-11/assets/javascripts/lunr/min/lunr.de.min.js +++ /dev/null @@ -1,18 +0,0 @@ -/*! - * Lunr languages, `German` language - * https://github.com/MihaiValentin/lunr-languages - * - * Copyright 2014, Mihai Valentin - * http://www.mozilla.org/MPL/ - */ -/*! - * based on - * Snowball JavaScript Library v0.3 - * http://code.google.com/p/urim/ - * http://snowball.tartarus.org/ - * - * Copyright 2010, Oleg Mazko - * http://www.mozilla.org/MPL/ - */ - -!function(e,r){"function"==typeof define&&define.amd?define(r):"object"==typeof 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andere anderem anderen anderer anderes anderm andern anderr anders auch auf aus bei bin bis bist da damit dann das dasselbe dazu daß dein deine deinem deinen deiner deines dem demselben den denn denselben der derer derselbe derselben des desselben dessen dich die dies diese dieselbe dieselben diesem diesen dieser dieses dir doch dort du durch ein eine einem einen einer eines einig einige einigem einigen einiger einiges einmal er es etwas euch euer eure eurem euren eurer eures für gegen gewesen hab habe haben hat hatte hatten hier hin hinter ich ihm ihn ihnen ihr ihre ihrem ihren ihrer ihres im in indem ins ist jede jedem jeden jeder jedes jene jenem jenen jener jenes jetzt kann kein keine keinem keinen keiner keines können könnte machen man manche manchem manchen mancher manches mein meine meinem meinen meiner meines mich mir mit muss musste nach nicht nichts noch nun nur ob oder ohne sehr sein seine seinem seinen seiner seines selbst sich sie sind so solche solchem solchen solcher solches soll sollte sondern sonst um und uns unse unsem unsen unser unses unter viel vom von vor war waren warst was weg weil weiter welche welchem welchen welcher welches wenn werde werden wie wieder will wir wird wirst wo wollen wollte während würde würden zu zum zur zwar zwischen über".split(" ")),e.Pipeline.registerFunction(e.de.stopWordFilter,"stopWordFilter-de")}}); \ No newline at end of file diff --git a/pr-preview/pr-11/assets/javascripts/lunr/min/lunr.du.min.js b/pr-preview/pr-11/assets/javascripts/lunr/min/lunr.du.min.js deleted file mode 100644 index 49a0f3f..0000000 --- a/pr-preview/pr-11/assets/javascripts/lunr/min/lunr.du.min.js +++ /dev/null @@ -1,18 +0,0 @@ -/*! - * Lunr languages, `Dutch` language - * https://github.com/MihaiValentin/lunr-languages - * - * Copyright 2014, Mihai Valentin - * http://www.mozilla.org/MPL/ - */ -/*! - * based on - * Snowball JavaScript Library v0.3 - * http://code.google.com/p/urim/ - * http://snowball.tartarus.org/ - * - * Copyright 2010, Oleg Mazko - * http://www.mozilla.org/MPL/ - */ - -!function(e,r){"function"==typeof define&&define.amd?define(r):"object"==typeof exports?module.exports=r():r()(e.lunr)}(this,function(){return function(e){if(void 0===e)throw new Error("Lunr is not present. 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a/pr-preview/pr-11/assets/javascripts/lunr/min/lunr.es.min.js +++ /dev/null @@ -1,18 +0,0 @@ -/*! - * Lunr languages, `Spanish` language - * https://github.com/MihaiValentin/lunr-languages - * - * Copyright 2014, Mihai Valentin - * http://www.mozilla.org/MPL/ - */ -/*! - * based on - * Snowball JavaScript Library v0.3 - * http://code.google.com/p/urim/ - * http://snowball.tartarus.org/ - * - * Copyright 2010, Oleg Mazko - * http://www.mozilla.org/MPL/ - */ - -!function(e,s){"function"==typeof define&&define.amd?define(s):"object"==typeof exports?module.exports=s():s()(e.lunr)}(this,function(){return function(e){if(void 0===e)throw new Error("Lunr is not present. 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keressünk keresztül ki kívül között közül legalább legyen lehet lehetett lenne lenni lesz lett maga magát majd majd meg mellett mely melyek mert mi mikor milyen minden mindenki mindent mindig mint mintha mit mivel miért most már más másik még míg nagy nagyobb nagyon ne nekem neki nem nincs néha néhány nélkül olyan ott pedig persze rá s saját sem semmi sok sokat sokkal szemben szerint szinte számára talán tehát teljes tovább továbbá több ugyanis utolsó után utána vagy vagyis vagyok valaki valami valamint való van vannak vele vissza viszont volna volt voltak voltam voltunk által általában át én éppen és így õ õk õket össze úgy új újabb újra".split(" ")),e.Pipeline.registerFunction(e.hu.stopWordFilter,"stopWordFilter-hu")}}); \ No newline at end of file diff --git a/pr-preview/pr-11/assets/javascripts/lunr/min/lunr.it.min.js b/pr-preview/pr-11/assets/javascripts/lunr/min/lunr.it.min.js deleted file mode 100644 index 344b6a3..0000000 --- a/pr-preview/pr-11/assets/javascripts/lunr/min/lunr.it.min.js +++ /dev/null @@ -1,18 +0,0 @@ -/*! - * Lunr languages, `Italian` language - * https://github.com/MihaiValentin/lunr-languages - * - * Copyright 2014, Mihai Valentin - * http://www.mozilla.org/MPL/ - */ -/*! - * based on - * Snowball JavaScript Library v0.3 - * http://code.google.com/p/urim/ - * http://snowball.tartarus.org/ - * - * Copyright 2010, Oleg Mazko - * http://www.mozilla.org/MPL/ - */ - -!function(e,r){"function"==typeof define&&define.amd?define(r):"object"==typeof exports?module.exports=r():r()(e.lunr)}(this,function(){return function(e){if(void 0===e)throw new Error("Lunr is not present. Please include / require Lunr before this script.");if(void 0===e.stemmerSupport)throw new Error("Lunr stemmer support is not present. Please include / require Lunr stemmer support before this script.");e.it=function(){this.pipeline.reset(),this.pipeline.add(e.it.trimmer,e.it.stopWordFilter,e.it.stemmer),this.searchPipeline&&(this.searchPipeline.reset(),this.searchPipeline.add(e.it.stemmer))},e.it.wordCharacters="A-Za-zªºÀ-ÖØ-öø-ʸˠ-ˤᴀ-ᴥᴬ-ᵜᵢ-ᵥᵫ-ᵷᵹ-ᶾḀ-ỿⁱⁿₐ-ₜKÅℲⅎⅠ-ↈⱠ-ⱿꜢ-ꞇꞋ-ꞭꞰ-ꞷꟷ-ꟿꬰ-ꭚꭜ-ꭤff-stＡ-Ｚａ-ｚ",e.it.trimmer=e.trimmerSupport.generateTrimmer(e.it.wordCharacters),e.Pipeline.registerFunction(e.it.trimmer,"trimmer-it"),e.it.stemmer=function(){var r=e.stemmerSupport.Among,n=e.stemmerSupport.SnowballProgram,i=new function(){function e(e,r,n){return!(!x.eq_s(1,e)||(x.ket=x.cursor,!x.in_grouping(L,97,249)))&&(x.slice_from(r),x.cursor=n,!0)}function i(){for(var r,n,i,o,t=x.cursor;;){if(x.bra=x.cursor,r=x.find_among(h,7))switch(x.ket=x.cursor,r){case 1:x.slice_from("à");continue;case 2:x.slice_from("è");continue;case 3:x.slice_from("ì");continue;case 4:x.slice_from("ò");continue;case 5:x.slice_from("ù");continue;case 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avevo avrai avranno avrebbe avrebbero avrei avremmo avremo avreste avresti avrete avrà avrò avuta avute avuti avuto c che chi ci coi col come con contro cui da dagl dagli dai dal dall dalla dalle dallo degl degli dei del dell della delle dello di dov dove e ebbe ebbero ebbi ed era erano eravamo eravate eri ero essendo faccia facciamo facciano facciate faccio facemmo facendo facesse facessero facessi facessimo faceste facesti faceva facevamo facevano facevate facevi facevo fai fanno farai faranno farebbe farebbero farei faremmo faremo fareste faresti farete farà farò fece fecero feci fosse fossero fossi fossimo foste fosti fu fui fummo furono gli ha hai hanno ho i il in io l la le lei li lo loro lui ma mi mia mie miei mio ne negl negli nei nel nell nella nelle nello noi non nostra nostre nostri nostro o per perché più quale quanta quante quanti quanto quella quelle quelli quello questa queste questi questo sarai saranno sarebbe sarebbero sarei saremmo saremo sareste saresti sarete sarà sarò se sei si sia siamo siano siate siete sono sta stai stando stanno starai staranno starebbe starebbero starei staremmo staremo stareste staresti starete starà starò stava stavamo stavano stavate stavi stavo stemmo stesse stessero stessi stessimo steste stesti stette stettero stetti stia stiamo stiano stiate sto su sua sue sugl sugli sui sul sull sulla sulle sullo suo suoi ti tra tu tua tue tuo tuoi tutti tutto un una uno vi voi vostra vostre vostri vostro è".split(" ")),e.Pipeline.registerFunction(e.it.stopWordFilter,"stopWordFilter-it")}}); \ No newline at end of file diff --git a/pr-preview/pr-11/assets/javascripts/lunr/min/lunr.ja.min.js b/pr-preview/pr-11/assets/javascripts/lunr/min/lunr.ja.min.js deleted file mode 100644 index 5f254eb..0000000 --- a/pr-preview/pr-11/assets/javascripts/lunr/min/lunr.ja.min.js +++ /dev/null @@ -1 +0,0 @@ -!function(e,r){"function"==typeof define&&define.amd?define(r):"object"==typeof exports?module.exports=r():r()(e.lunr)}(this,function(){return 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t(){for(;!C.in_grouping(q,97,232);){if(C.cursor>=C.limit)return!0;C.cursor++}for(;!C.out_grouping(q,97,232);){if(C.cursor>=C.limit)return!0;C.cursor++}return!1}function s(){for(var r;;)if(C.bra=C.cursor,r=C.find_among(p,3))switch(C.ket=C.cursor,r){case 1:C.slice_from("y");break;case 2:C.slice_from("i");break;case 3:if(C.cursor>=C.limit)return;C.cursor++}}function u(){return _<=C.cursor}function c(){return d<=C.cursor}function a(){var r=C.limit-C.cursor;C.find_among_b(g,3)&&(C.cursor=C.limit-r,C.ket=C.cursor,C.cursor>C.limit_backward&&(C.cursor--,C.bra=C.cursor,C.slice_del()))}function l(){var r;w=!1,C.ket=C.cursor,C.eq_s_b(1,"e")&&(C.bra=C.cursor,u()&&(r=C.limit-C.cursor,C.out_grouping_b(q,97,232)&&(C.cursor=C.limit-r,C.slice_del(),w=!0,a())))}function m(){var r;u()&&(r=C.limit-C.cursor,C.out_grouping_b(q,97,232)&&(C.cursor=C.limit-r,C.eq_s_b(3,"gem")||(C.cursor=C.limit-r,C.slice_del(),a())))}function f(){var 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dă ea ei el ele eram este eu eşti face fata fi fie fiecare fii fim fiu fiţi frumos fără graţie halbă iar ieri la le li lor lui lângă lîngă mai mea mei mele mereu meu mi mie mine mult multă mulţi mulţumesc mâine mîine mă ne nevoie nici nicăieri nimeni nimeri nimic nişte noastre noastră noi noroc nostru nouă noştri nu opt ori oricare orice oricine oricum oricând oricât oricînd oricît oriunde patra patru patrulea pe pentru peste pic poate pot prea prima primul prin puţin puţina puţină până pînă rog sa sale sau se spate spre sub sunt suntem sunteţi sută sînt sîntem sînteţi să săi său ta tale te timp tine toate toată tot totuşi toţi trei treia treilea tu tăi tău un una unde undeva unei uneia unele uneori unii unor unora unu unui unuia unul vi voastre voastră voi vostru vouă voştri vreme vreo vreun vă zece zero zi zice îi îl îmi împotriva în înainte înaintea încotro încât încît între întrucât întrucît îţi ăla ălea ăsta ăstea ăştia şapte şase şi ştiu ţi ţie".split(" 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i=Dr.limit-Dr.cursor;if(d())Dr.bra=Dr.cursor,Dr.slice_del();else if(Dr.cursor=Dr.limit-i,m())Dr.bra=Dr.cursor,Dr.slice_del(),Dr.ket=Dr.cursor,W()&&(Dr.bra=Dr.cursor,Dr.slice_del(),K());else if(Dr.cursor=Dr.limit-i,!K())return!1;return!0}function N(r){if(Dr.ket=Dr.cursor,!z()&&(Dr.cursor=Dr.limit-r,!b()))return!1;var i=Dr.limit-Dr.cursor;return!(!m()&&(Dr.cursor=Dr.limit-i,!d()))&&(Dr.bra=Dr.cursor,Dr.slice_del(),Dr.ket=Dr.cursor,W()&&(Dr.bra=Dr.cursor,Dr.slice_del(),K()),!0)}function O(){var r,i=Dr.limit-Dr.cursor;return Dr.ket=Dr.cursor,!(!w()&&(Dr.cursor=Dr.limit-i,!v()))&&(Dr.bra=Dr.cursor,Dr.slice_del(),r=Dr.limit-Dr.cursor,Dr.ket=Dr.cursor,!(!W()||(Dr.bra=Dr.cursor,Dr.slice_del(),!K()))||(Dr.cursor=Dr.limit-r,Dr.ket=Dr.cursor,!(a()||(Dr.cursor=Dr.limit-r,m()||(Dr.cursor=Dr.limit-r,K())))||(Dr.bra=Dr.cursor,Dr.slice_del(),Dr.ket=Dr.cursor,W()&&(Dr.bra=Dr.cursor,Dr.slice_del(),K()),!0)))}function Q(){var r,i,e=Dr.limit-Dr.cursor;if(Dr.ket=Dr.cursor,!p()&&(Dr.cursor=Dr.limit-e,!f()&&(Dr.cursor=Dr.limit-e,!_())))return!1;if(Dr.bra=Dr.cursor,Dr.slice_del(),Dr.ket=Dr.cursor,r=Dr.limit-Dr.cursor,a())Dr.bra=Dr.cursor,Dr.slice_del(),i=Dr.limit-Dr.cursor,Dr.ket=Dr.cursor,W()||(Dr.cursor=Dr.limit-i);else if(Dr.cursor=Dr.limit-r,!W())return!0;return Dr.bra=Dr.cursor,Dr.slice_del(),Dr.ket=Dr.cursor,K(),!0}function R(){var r,i,e=Dr.limit-Dr.cursor;if(Dr.ket=Dr.cursor,W())return Dr.bra=Dr.cursor,Dr.slice_del(),void K();if(Dr.cursor=Dr.limit-e,Dr.ket=Dr.cursor,q())if(Dr.bra=Dr.cursor,Dr.slice_del(),r=Dr.limit-Dr.cursor,Dr.ket=Dr.cursor,d())Dr.bra=Dr.cursor,Dr.slice_del();else{if(Dr.cursor=Dr.limit-r,Dr.ket=Dr.cursor,!a()&&(Dr.cursor=Dr.limit-r,!m())){if(Dr.cursor=Dr.limit-r,Dr.ket=Dr.cursor,!W())return;if(Dr.bra=Dr.cursor,Dr.slice_del(),!K())return}Dr.bra=Dr.cursor,Dr.slice_del(),Dr.ket=Dr.cursor,W()&&(Dr.bra=Dr.cursor,Dr.slice_del(),K())}else 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r=Dr.limit-Dr.cursor;if(Dr.in_grouping_b(Wr,97,305)){Dr.cursor=Dr.limit-r;break}if(Dr.cursor=Dr.limit-r,Dr.cursor<=Dr.limit_backward)return!1;Dr.cursor--}return!0}function X(r,i,e){if(Dr.cursor=Dr.limit-r,V()){var n=Dr.limit-Dr.cursor;if(!Dr.eq_s_b(1,i)&&(Dr.cursor=Dr.limit-n,!Dr.eq_s_b(1,e)))return!0;Dr.cursor=Dr.limit-r;var t=Dr.cursor;return Dr.insert(Dr.cursor,Dr.cursor,e),Dr.cursor=t,!1}return!0}function Y(){var r=Dr.limit-Dr.cursor;(Dr.eq_s_b(1,"d")||(Dr.cursor=Dr.limit-r,Dr.eq_s_b(1,"g")))&&X(r,"a","ı")&&X(r,"e","i")&&X(r,"o","u")&&X(r,"ö","ü")}function $(){for(var r,i=Dr.cursor,e=2;;){for(r=Dr.cursor;!Dr.in_grouping(Wr,97,305);){if(Dr.cursor>=Dr.limit)return Dr.cursor=r,!(e>0)&&(Dr.cursor=i,!0);Dr.cursor++}e--}}function rr(r,i,e){for(;!Dr.eq_s(i,e);){if(Dr.cursor>=Dr.limit)return!0;Dr.cursor++}return(tr=i)!=Dr.limit||(Dr.cursor=r,!1)}function ir(){var r=Dr.cursor;return!rr(r,2,"ad")||(Dr.cursor=r,!rr(r,5,"soyad"))}function er(){var r=Dr.cursor;return!ir()&&(Dr.limit_backward=r,Dr.cursor=Dr.limit,Y(),Dr.cursor=Dr.limit,U(),!0)}var nr,tr,ur=[new i("m",-1,-1),new i("n",-1,-1),new i("miz",-1,-1),new i("niz",-1,-1),new i("muz",-1,-1),new i("nuz",-1,-1),new i("müz",-1,-1),new i("nüz",-1,-1),new i("mız",-1,-1),new i("nız",-1,-1)],or=[new i("leri",-1,-1),new i("ları",-1,-1)],sr=[new i("ni",-1,-1),new i("nu",-1,-1),new i("nü",-1,-1),new i("nı",-1,-1)],cr=[new i("in",-1,-1),new i("un",-1,-1),new i("ün",-1,-1),new i("ın",-1,-1)],lr=[new i("a",-1,-1),new i("e",-1,-1)],ar=[new i("na",-1,-1),new i("ne",-1,-1)],mr=[new i("da",-1,-1),new i("ta",-1,-1),new i("de",-1,-1),new i("te",-1,-1)],dr=[new i("nda",-1,-1),new i("nde",-1,-1)],fr=[new i("dan",-1,-1),new i("tan",-1,-1),new i("den",-1,-1),new i("ten",-1,-1)],br=[new i("ndan",-1,-1),new i("nden",-1,-1)],wr=[new i("la",-1,-1),new i("le",-1,-1)],_r=[new i("ca",-1,-1),new i("ce",-1,-1)],kr=[new i("im",-1,-1),new i("um",-1,-1),new i("üm",-1,-1),new i("ım",-1,-1)],pr=[new i("sin",-1,-1),new i("sun",-1,-1),new i("sün",-1,-1),new i("sın",-1,-1)],gr=[new i("iz",-1,-1),new i("uz",-1,-1),new i("üz",-1,-1),new i("ız",-1,-1)],yr=[new i("siniz",-1,-1),new i("sunuz",-1,-1),new i("sünüz",-1,-1),new i("sınız",-1,-1)],zr=[new i("lar",-1,-1),new i("ler",-1,-1)],vr=[new i("niz",-1,-1),new i("nuz",-1,-1),new i("nüz",-1,-1),new i("nız",-1,-1)],hr=[new i("dir",-1,-1),new i("tir",-1,-1),new i("dur",-1,-1),new i("tur",-1,-1),new i("dür",-1,-1),new i("tür",-1,-1),new i("dır",-1,-1),new i("tır",-1,-1)],qr=[new i("casına",-1,-1),new i("cesine",-1,-1)],Cr=[new i("di",-1,-1),new i("ti",-1,-1),new i("dik",-1,-1),new i("tik",-1,-1),new i("duk",-1,-1),new i("tuk",-1,-1),new i("dük",-1,-1),new i("tük",-1,-1),new i("dık",-1,-1),new i("tık",-1,-1),new i("dim",-1,-1),new i("tim",-1,-1),new i("dum",-1,-1),new i("tum",-1,-1),new i("düm",-1,-1),new i("tüm",-1,-1),new i("dım",-1,-1),new i("tım",-1,-1),new i("din",-1,-1),new i("tin",-1,-1),new i("dun",-1,-1),new i("tun",-1,-1),new i("dün",-1,-1),new i("tün",-1,-1),new i("dın",-1,-1),new i("tın",-1,-1),new i("du",-1,-1),new i("tu",-1,-1),new i("dü",-1,-1),new i("tü",-1,-1),new i("dı",-1,-1),new i("tı",-1,-1)],Pr=[new i("sa",-1,-1),new i("se",-1,-1),new i("sak",-1,-1),new i("sek",-1,-1),new i("sam",-1,-1),new i("sem",-1,-1),new i("san",-1,-1),new i("sen",-1,-1)],Fr=[new i("miş",-1,-1),new i("muş",-1,-1),new i("müş",-1,-1),new i("mış",-1,-1)],Sr=[new i("b",-1,1),new i("c",-1,2),new i("d",-1,3),new i("ğ",-1,4)],Wr=[17,65,16,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,32,8,0,0,0,0,0,0,1],Lr=[1,16,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8,0,0,0,0,0,0,1],xr=[1,64,16,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1],Ar=[17,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,130],Er=[1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1],jr=[17],Tr=[65],Zr=[65],Br=[["a",xr,97,305],["e",Ar,101,252],["ı",Er,97,305],["i",jr,101,105],["o",Tr,111,117],["ö",Zr,246,252],["u",Tr,111,117]],Dr=new e;this.setCurrent=function(r){Dr.setCurrent(r)},this.getCurrent=function(){return Dr.getCurrent()},this.stem=function(){return!!($()&&(Dr.limit_backward=Dr.cursor,Dr.cursor=Dr.limit,J(),Dr.cursor=Dr.limit,nr&&(R(),Dr.cursor=Dr.limit_backward,er())))}};return function(r){return"function"==typeof r.update?r.update(function(r){return n.setCurrent(r),n.stem(),n.getCurrent()}):(n.setCurrent(r),n.stem(),n.getCurrent())}}(),r.Pipeline.registerFunction(r.tr.stemmer,"stemmer-tr"),r.tr.stopWordFilter=r.generateStopWordFilter("acaba altmış altı ama ancak arada aslında ayrıca bana bazı belki ben benden beni benim beri beş bile bin bir biri birkaç birkez birçok birşey birşeyi biz bizden bize bizi bizim bu buna bunda bundan bunlar bunları bunların bunu bunun burada böyle böylece da daha dahi de defa değil diye diğer doksan dokuz dolayı dolayısıyla dört edecek eden ederek edilecek ediliyor edilmesi ediyor elli en etmesi etti ettiği ettiğini eğer gibi göre halen hangi hatta hem henüz hep hepsi her herhangi herkesin hiç hiçbir iki ile ilgili ise itibaren itibariyle için işte kadar karşın katrilyon kendi kendilerine kendini kendisi kendisine kendisini kez ki kim kimden kime kimi kimse kırk milyar milyon mu mü mı nasıl ne neden nedenle nerde nerede nereye niye niçin o olan olarak oldu olduklarını olduğu olduğunu olmadı olmadığı olmak olması olmayan olmaz olsa olsun olup olur olursa oluyor on ona ondan onlar onlardan onları onların onu onun otuz oysa pek rağmen sadece sanki sekiz seksen sen senden seni senin siz sizden sizi sizin tarafından trilyon tüm var vardı ve veya ya yani yapacak yapmak yaptı yaptıkları yaptığı yaptığını yapılan yapılması yapıyor yedi yerine yetmiş yine yirmi yoksa yüz zaten çok çünkü öyle üzere üç şey şeyden şeyi şeyler şu şuna şunda şundan şunları şunu şöyle".split(" ")),r.Pipeline.registerFunction(r.tr.stopWordFilter,"stopWordFilter-tr")}}); \ No newline at end of file diff --git a/pr-preview/pr-11/assets/javascripts/lunr/min/lunr.vi.min.js b/pr-preview/pr-11/assets/javascripts/lunr/min/lunr.vi.min.js deleted file mode 100644 index 22aed28..0000000 --- a/pr-preview/pr-11/assets/javascripts/lunr/min/lunr.vi.min.js +++ /dev/null @@ -1 +0,0 @@ -!function(e,r){"function"==typeof define&&define.amd?define(r):"object"==typeof exports?module.exports=r():r()(e.lunr)}(this,function(){return function(e){if(void 0===e)throw new Error("Lunr is not present. Please include / require Lunr before this script.");if(void 0===e.stemmerSupport)throw new Error("Lunr stemmer support is not present. Please include / require Lunr stemmer support before this script.");e.vi=function(){this.pipeline.reset(),this.pipeline.add(e.vi.stopWordFilter,e.vi.trimmer)},e.vi.wordCharacters="[A-Za-ẓ̀͐́͑̉̃̓ÂâÊêÔôĂ-ăĐ-đƠ-ơƯ-ư]",e.vi.trimmer=e.trimmerSupport.generateTrimmer(e.vi.wordCharacters),e.Pipeline.registerFunction(e.vi.trimmer,"trimmer-vi"),e.vi.stopWordFilter=e.generateStopWordFilter("là cái nhưng mà".split(" "))}}); \ No newline at end of file diff --git a/pr-preview/pr-11/assets/javascripts/lunr/min/lunr.zh.min.js b/pr-preview/pr-11/assets/javascripts/lunr/min/lunr.zh.min.js deleted file mode 100644 index 9838ef9..0000000 --- a/pr-preview/pr-11/assets/javascripts/lunr/min/lunr.zh.min.js +++ /dev/null @@ -1 +0,0 @@ -!function(e,r){"function"==typeof define&&define.amd?define(r):"object"==typeof exports?module.exports=r(require("@node-rs/jieba")):r()(e.lunr)}(this,function(e){return function(r,t){if(void 0===r)throw new Error("Lunr is not present. Please include / require Lunr before this script.");if(void 0===r.stemmerSupport)throw new Error("Lunr stemmer support is not present. Please include / require Lunr stemmer support before this script.");var i="2"==r.version[0];r.zh=function(){this.pipeline.reset(),this.pipeline.add(r.zh.trimmer,r.zh.stopWordFilter,r.zh.stemmer),i?this.tokenizer=r.zh.tokenizer:(r.tokenizer&&(r.tokenizer=r.zh.tokenizer),this.tokenizerFn&&(this.tokenizerFn=r.zh.tokenizer))},r.zh.tokenizer=function(n){if(!arguments.length||null==n||void 0==n)return[];if(Array.isArray(n))return n.map(function(e){return i?new r.Token(e.toLowerCase()):e.toLowerCase()});t&&e.load(t);var o=n.toString().trim().toLowerCase(),s=[];e.cut(o,!0).forEach(function(e){s=s.concat(e.split(" "))}),s=s.filter(function(e){return!!e});var u=0;return s.map(function(e,t){if(i){var n=o.indexOf(e,u),s={};return s.position=[n,e.length],s.index=t,u=n,new r.Token(e,s)}return e})},r.zh.wordCharacters="\\w一-龥",r.zh.trimmer=r.trimmerSupport.generateTrimmer(r.zh.wordCharacters),r.Pipeline.registerFunction(r.zh.trimmer,"trimmer-zh"),r.zh.stemmer=function(){return function(e){return e}}(),r.Pipeline.registerFunction(r.zh.stemmer,"stemmer-zh"),r.zh.stopWordFilter=r.generateStopWordFilter("的 一 不 在 人 有 是 为 以 于 上 他 而 后 之 来 及 了 因 下 可 到 由 这 与 也 此 但 并 个 其 已 无 小 我 们 起 最 再 今 去 好 只 又 或 很 亦 某 把 那 你 乃 它 吧 被 比 别 趁 当 从 到 得 打 凡 儿 尔 该 各 给 跟 和 何 还 即 几 既 看 据 距 靠 啦 了 另 么 每 们 嘛 拿 哪 那 您 凭 且 却 让 仍 啥 如 若 使 谁 虽 随 同 所 她 哇 嗡 往 哪 些 向 沿 哟 用 于 咱 则 怎 曾 至 致 着 诸 自".split(" ")),r.Pipeline.registerFunction(r.zh.stopWordFilter,"stopWordFilter-zh")}}); \ No newline at end of file diff --git a/pr-preview/pr-11/assets/javascripts/lunr/tinyseg.js b/pr-preview/pr-11/assets/javascripts/lunr/tinyseg.js deleted file mode 100644 index 167fa6d..0000000 --- a/pr-preview/pr-11/assets/javascripts/lunr/tinyseg.js +++ /dev/null @@ -1,206 +0,0 @@ -/** - * export the module via AMD, CommonJS or as a browser global - * Export code from https://github.com/umdjs/umd/blob/master/returnExports.js - */ -;(function (root, factory) { - if (typeof define === 'function' && define.amd) { - // AMD. Register as an anonymous module. - define(factory) - } else if (typeof exports === 'object') { - /** - * Node. 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j <= i; j++) { - path[j].merge = p; - } - info.merge = p; - } - - return info; - }); - return infos.filter(function(info) { return info; }); - }, - - fallback: function(path, leftBoundary, text, i) { - var _info = path[leftBoundary]; - if (text[i].match(/[\u0E48-\u0E4E]/)) { - if (leftBoundary != 0) - leftBoundary = path[leftBoundary].p; - return {p: leftBoundary, - mw: 0, - w: 1 + _info.w, - unk: 1 + _info.unk, - type: "UNK"}; -/* } else if(leftBoundary > 0 && path[leftBoundary].type !== "UNK") { - leftBoundary = path[leftBoundary].p; - return {p: leftBoundary, - w: 1 + _info.w, - unk: 1 + _info.unk, - type: "UNK"}; */ - } else { - return {p: leftBoundary, - mw: _info.mw, - w: 1 + _info.w, - unk: 1 + _info.unk, - type: "UNK"}; - } - }, - - build: function(path, finalAcceptors, i, leftBoundary, text) { - var basicPathInfos = this.buildByAcceptors(path, finalAcceptors, i); - if (basicPathInfos.length > 0) { - return basicPathInfos; - } else { - return [this.fallback(path, leftBoundary, text, i)]; - } - } -}; - -module.exports = function() { - return _.clone(PathInfoBuilder); -} - -},{"./wordcut_core":8,"underscore":25}],5:[function(require,module,exports){ -var _ = require("underscore"); - - -var PathSelector = { - selectPath: function(paths) { - var path = paths.reduce(function(selectedPath, path) { - if (selectedPath == null) { - return path; - } else { - if (path.unk < selectedPath.unk) - return path; - if (path.unk == selectedPath.unk) { - if (path.mw < selectedPath.mw) - return path - if (path.mw == selectedPath.mw) { - if (path.w < selectedPath.w) - return path; - } - } - return selectedPath; - } - }, null); - return path; - }, - - createPath: function() { - return [{p:null, w:0, unk:0, type: "INIT", mw:0}]; - } -}; - -module.exports = function() { - return _.clone(PathSelector); -}; - -},{"underscore":25}],6:[function(require,module,exports){ -function isMatch(pat, offset, ch) { - if (pat.length <= offset) - return false; - var _ch = pat[offset]; - return _ch == ch || - (_ch.match(/[กข]/) && ch.match(/[ก-ฮ]/)) || - (_ch.match(/[มบ]/) && ch.match(/[ก-ฮ]/)) || - (_ch.match(/\u0E49/) && ch.match(/[\u0E48-\u0E4B]/)); -} - -var Rule0 = { - pat: "เหก็ม", - createAcceptor: function(tag) { - return {strOffset: 0, - isFinal: false, - transit: function(ch) { - if (isMatch(Rule0.pat, this.strOffset,ch)) { - this.isFinal = (this.strOffset + 1 == Rule0.pat.length); - this.strOffset++; - } else { - this.isError = true; - } - return this; - }, - isError: false, - tag: "THAI_RULE", - type: "THAI_RULE", - w: 1}; - } -}; - -var PartRule = { - createAcceptor: function(tag) { - return {strOffset: 0, - patterns: [ - "แก", "เก", "ก้", "กก์", "กา", "กี", "กิ", "กืก" - ], - isFinal: false, - transit: function(ch) { - var offset = this.strOffset; - this.patterns = this.patterns.filter(function(pat) { - return isMatch(pat, offset, ch); - }); - - if (this.patterns.length > 0) { - var len = 1 + offset; - this.isFinal = this.patterns.some(function(pat) { - return pat.length == len; - }); - this.strOffset++; - } else { - this.isError = true; - } - return this; - }, - isError: false, - tag: "PART", - type: "PART", - unk: 1, - w: 1}; - } -}; - -var ThaiRules = [Rule0, PartRule]; - -module.exports = ThaiRules; - -},{}],7:[function(require,module,exports){ -var sys = require("sys") - , WordcutDict = require("./dict") - , WordcutCore = require("./wordcut_core") - , PathInfoBuilder = require("./path_info_builder") - , PathSelector = require("./path_selector") - , Acceptors = require("./acceptors") - , latinRules = require("./latin_rules") - , thaiRules = require("./thai_rules") - , _ = require("underscore"); - - -var Wordcut = Object.create(WordcutCore); -Wordcut.defaultPathInfoBuilder = PathInfoBuilder; -Wordcut.defaultPathSelector = PathSelector; -Wordcut.defaultAcceptors = Acceptors; -Wordcut.defaultLatinRules = latinRules; -Wordcut.defaultThaiRules = thaiRules; -Wordcut.defaultDict = WordcutDict; - - -Wordcut.initNoDict = function(dict_path) { - var self = this; - self.pathInfoBuilder = new self.defaultPathInfoBuilder; - self.pathSelector = new self.defaultPathSelector; - self.acceptors = new self.defaultAcceptors; - self.defaultLatinRules.forEach(function(rule) { - self.acceptors.creators.push(rule); - }); - self.defaultThaiRules.forEach(function(rule) { - self.acceptors.creators.push(rule); - }); -}; - -Wordcut.init = function(dict_path, withDefault, additionalWords) { - withDefault = withDefault || false; - this.initNoDict(); - var dict = _.clone(this.defaultDict); - dict.init(dict_path, withDefault, additionalWords); - this.acceptors.creators.push(dict); -}; - -module.exports = Wordcut; - -},{"./acceptors":1,"./dict":2,"./latin_rules":3,"./path_info_builder":4,"./path_selector":5,"./thai_rules":6,"./wordcut_core":8,"sys":28,"underscore":25}],8:[function(require,module,exports){ -var WordcutCore = { - - buildPath: function(text) { - var self = this - , path = self.pathSelector.createPath() - , leftBoundary = 0; - self.acceptors.reset(); - for (var i = 0; i < text.length; i++) { - var ch = text[i]; - self.acceptors.transit(ch); - - var possiblePathInfos = self - .pathInfoBuilder - .build(path, - self.acceptors.getFinalAcceptors(), - i, - leftBoundary, - text); - var selectedPath = self.pathSelector.selectPath(possiblePathInfos) - - path.push(selectedPath); - if (selectedPath.type !== "UNK") { - leftBoundary = i; - } - } - return path; - }, - - pathToRanges: function(path) { - var e = path.length - 1 - , ranges = []; - - while (e > 0) { - var info = path[e] - , s = info.p; - - if (info.merge !== undefined && ranges.length > 0) { - var r = ranges[ranges.length - 1]; - r.s = info.merge; - s = r.s; - } else { - ranges.push({s:s, e:e}); - } - e = s; - } - return ranges.reverse(); - }, - - rangesToText: function(text, ranges, delimiter) { - return ranges.map(function(r) { - return text.substring(r.s, r.e); - }).join(delimiter); - }, - - cut: function(text, delimiter) { - var path = this.buildPath(text) - , ranges = this.pathToRanges(path); - return this - .rangesToText(text, ranges, - (delimiter === undefined ? "|" : delimiter)); - }, - - cutIntoRanges: function(text, noText) { - var path = this.buildPath(text) - , ranges = this.pathToRanges(path); - - if (!noText) { - ranges.forEach(function(r) { - r.text = text.substring(r.s, r.e); - }); - } - return ranges; - }, - - cutIntoArray: function(text) { - var path = this.buildPath(text) - , ranges = this.pathToRanges(path); - - return ranges.map(function(r) { - return text.substring(r.s, r.e) - }); - } -}; - -module.exports = WordcutCore; - -},{}],9:[function(require,module,exports){ -// http://wiki.commonjs.org/wiki/Unit_Testing/1.0 -// -// THIS IS NOT TESTED NOR LIKELY TO WORK OUTSIDE V8! -// -// Originally from narwhal.js (http://narwhaljs.org) -// Copyright (c) 2009 Thomas Robinson <280north.com> -// -// Permission is hereby granted, free of charge, to any person obtaining a copy -// of this software and associated documentation files (the 'Software'), to -// deal in the Software without restriction, including without limitation the -// rights to use, copy, modify, merge, publish, distribute, sublicense, and/or -// sell copies of the Software, and to permit persons to whom the Software is -// furnished to do so, subject to the following conditions: -// -// The above copyright notice and this permission notice shall be included in -// all copies or substantial portions of the Software. -// -// THE SOFTWARE IS PROVIDED 'AS IS', WITHOUT WARRANTY OF ANY KIND, EXPRESS OR -// IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, -// FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE -// AUTHORS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN -// ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION -// WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE. - -// when used in node, this will actually load the util module we depend on -// versus loading the builtin util module as happens otherwise -// this is a bug in node module loading as far as I am concerned -var util = require('util/'); - -var pSlice = Array.prototype.slice; -var hasOwn = Object.prototype.hasOwnProperty; - -// 1. The assert module provides functions that throw -// AssertionError's when particular conditions are not met. The -// assert module must conform to the following interface. - -var assert = module.exports = ok; - -// 2. The AssertionError is defined in assert. -// new assert.AssertionError({ message: message, -// actual: actual, -// expected: expected }) - -assert.AssertionError = function AssertionError(options) { - this.name = 'AssertionError'; - this.actual = options.actual; - this.expected = options.expected; - this.operator = options.operator; - if (options.message) { - this.message = options.message; - this.generatedMessage = false; - } else { - this.message = getMessage(this); - this.generatedMessage = true; - } - var stackStartFunction = options.stackStartFunction || fail; - - if (Error.captureStackTrace) { - Error.captureStackTrace(this, stackStartFunction); - } - else { - // non v8 browsers so we can have a stacktrace - var err = new Error(); - if (err.stack) { - var out = err.stack; - - // try to strip useless frames - var fn_name = stackStartFunction.name; - var idx = out.indexOf('\n' + fn_name); - if (idx >= 0) { - // once we have located the function frame - // we need to strip out everything before it (and its line) - var next_line = out.indexOf('\n', idx + 1); - out = out.substring(next_line + 1); - } - - this.stack = out; - } - } -}; - -// assert.AssertionError instanceof Error -util.inherits(assert.AssertionError, Error); - -function replacer(key, value) { - if (util.isUndefined(value)) { - return '' + value; - } - if (util.isNumber(value) && !isFinite(value)) { - return value.toString(); - } - if (util.isFunction(value) || util.isRegExp(value)) { - return value.toString(); - } - return value; -} - -function truncate(s, n) { - if (util.isString(s)) { - return s.length < n ? s : s.slice(0, n); - } else { - return s; - } -} - -function getMessage(self) { - return truncate(JSON.stringify(self.actual, replacer), 128) + ' ' + - self.operator + ' ' + - truncate(JSON.stringify(self.expected, replacer), 128); -} - -// At present only the three keys mentioned above are used and -// understood by the spec. Implementations or sub modules can pass -// other keys to the AssertionError's constructor - they will be -// ignored. - -// 3. All of the following functions must throw an AssertionError -// when a corresponding condition is not met, with a message that -// may be undefined if not provided. All assertion methods provide -// both the actual and expected values to the assertion error for -// display purposes. - -function fail(actual, expected, message, operator, stackStartFunction) { - throw new assert.AssertionError({ - message: message, - actual: actual, - expected: expected, - operator: operator, - stackStartFunction: stackStartFunction - }); -} - -// EXTENSION! allows for well behaved errors defined elsewhere. -assert.fail = fail; - -// 4. Pure assertion tests whether a value is truthy, as determined -// by !!guard. -// assert.ok(guard, message_opt); -// This statement is equivalent to assert.equal(true, !!guard, -// message_opt);. To test strictly for the value true, use -// assert.strictEqual(true, guard, message_opt);. - -function ok(value, message) { - if (!value) fail(value, true, message, '==', assert.ok); -} -assert.ok = ok; - -// 5. The equality assertion tests shallow, coercive equality with -// ==. -// assert.equal(actual, expected, message_opt); - -assert.equal = function equal(actual, expected, message) { - if (actual != expected) fail(actual, expected, message, '==', assert.equal); -}; - -// 6. The non-equality assertion tests for whether two objects are not equal -// with != assert.notEqual(actual, expected, message_opt); - -assert.notEqual = function notEqual(actual, expected, message) { - if (actual == expected) { - fail(actual, expected, message, '!=', assert.notEqual); - } -}; - -// 7. The equivalence assertion tests a deep equality relation. -// assert.deepEqual(actual, expected, message_opt); - -assert.deepEqual = function deepEqual(actual, expected, message) { - if (!_deepEqual(actual, expected)) { - fail(actual, expected, message, 'deepEqual', assert.deepEqual); - } -}; - -function _deepEqual(actual, expected) { - // 7.1. All identical values are equivalent, as determined by ===. - if (actual === expected) { - return true; - - } else if (util.isBuffer(actual) && util.isBuffer(expected)) { - if (actual.length != expected.length) return false; - - for (var i = 0; i < actual.length; i++) { - if (actual[i] !== expected[i]) return false; - } - - return true; - - // 7.2. If the expected value is a Date object, the actual value is - // equivalent if it is also a Date object that refers to the same time. - } else if (util.isDate(actual) && util.isDate(expected)) { - return actual.getTime() === expected.getTime(); - - // 7.3 If the expected value is a RegExp object, the actual value is - // equivalent if it is also a RegExp object with the same source and - // properties (`global`, `multiline`, `lastIndex`, `ignoreCase`). - } else if (util.isRegExp(actual) && util.isRegExp(expected)) { - return actual.source === expected.source && - actual.global === expected.global && - actual.multiline === expected.multiline && - actual.lastIndex === expected.lastIndex && - actual.ignoreCase === expected.ignoreCase; - - // 7.4. Other pairs that do not both pass typeof value == 'object', - // equivalence is determined by ==. - } else if (!util.isObject(actual) && !util.isObject(expected)) { - return actual == expected; - - // 7.5 For all other Object pairs, including Array objects, equivalence is - // determined by having the same number of owned properties (as verified - // with Object.prototype.hasOwnProperty.call), the same set of keys - // (although not necessarily the same order), equivalent values for every - // corresponding key, and an identical 'prototype' property. Note: this - // accounts for both named and indexed properties on Arrays. - } else { - return objEquiv(actual, expected); - } -} - -function isArguments(object) { - return Object.prototype.toString.call(object) == '[object Arguments]'; -} - -function objEquiv(a, b) { - if (util.isNullOrUndefined(a) || util.isNullOrUndefined(b)) - return false; - // an identical 'prototype' property. - if (a.prototype !== b.prototype) return false; - // if one is a primitive, the other must be same - if (util.isPrimitive(a) || util.isPrimitive(b)) { - return a === b; - } - var aIsArgs = isArguments(a), - bIsArgs = isArguments(b); - if ((aIsArgs && !bIsArgs) || (!aIsArgs && bIsArgs)) - return false; - if (aIsArgs) { - a = pSlice.call(a); - b = pSlice.call(b); - return _deepEqual(a, b); - } - var ka = objectKeys(a), - kb = objectKeys(b), - key, i; - // having the same number of owned properties (keys incorporates - // hasOwnProperty) - if (ka.length != kb.length) - return false; - //the same set of keys (although not necessarily the same order), - ka.sort(); - kb.sort(); - //~~~cheap key test - for (i = ka.length - 1; i >= 0; i--) { - if (ka[i] != kb[i]) - return false; - } - //equivalent values for every corresponding key, and - //~~~possibly expensive deep test - for (i = ka.length - 1; i >= 0; i--) { - key = ka[i]; - if (!_deepEqual(a[key], b[key])) return false; - } - return true; -} - -// 8. The non-equivalence assertion tests for any deep inequality. -// assert.notDeepEqual(actual, expected, message_opt); - -assert.notDeepEqual = function notDeepEqual(actual, expected, message) { - if (_deepEqual(actual, expected)) { - fail(actual, expected, message, 'notDeepEqual', assert.notDeepEqual); - } -}; - -// 9. The strict equality assertion tests strict equality, as determined by ===. -// assert.strictEqual(actual, expected, message_opt); - -assert.strictEqual = function strictEqual(actual, expected, message) { - if (actual !== expected) { - fail(actual, expected, message, '===', assert.strictEqual); - } -}; - -// 10. The strict non-equality assertion tests for strict inequality, as -// determined by !==. assert.notStrictEqual(actual, expected, message_opt); - -assert.notStrictEqual = function notStrictEqual(actual, expected, message) { - if (actual === expected) { - fail(actual, expected, message, '!==', assert.notStrictEqual); - } -}; - -function expectedException(actual, expected) { - if (!actual || !expected) { - return false; - } - - if (Object.prototype.toString.call(expected) == '[object RegExp]') { - return expected.test(actual); - } else if (actual instanceof expected) { - return true; - } else if (expected.call({}, actual) === true) { - return true; - } - - return false; -} - -function _throws(shouldThrow, block, expected, message) { - var actual; - - if (util.isString(expected)) { - message = expected; - expected = null; - } - - try { - block(); - } catch (e) { - actual = e; - } - - message = (expected && expected.name ? ' (' + expected.name + ').' : '.') + - (message ? ' ' + message : '.'); - - if (shouldThrow && !actual) { - fail(actual, expected, 'Missing expected exception' + message); - } - - if (!shouldThrow && expectedException(actual, expected)) { - fail(actual, expected, 'Got unwanted exception' + message); - } - - if ((shouldThrow && actual && expected && - !expectedException(actual, expected)) || (!shouldThrow && actual)) { - throw actual; - } -} - -// 11. Expected to throw an error: -// assert.throws(block, Error_opt, message_opt); - -assert.throws = function(block, /*optional*/error, /*optional*/message) { - _throws.apply(this, [true].concat(pSlice.call(arguments))); -}; - -// EXTENSION! This is annoying to write outside this module. -assert.doesNotThrow = function(block, /*optional*/message) { - _throws.apply(this, [false].concat(pSlice.call(arguments))); -}; - -assert.ifError = function(err) { if (err) {throw err;}}; - -var objectKeys = Object.keys || function (obj) { - var keys = []; - for (var key in obj) { - if (hasOwn.call(obj, key)) keys.push(key); - } - return keys; -}; - -},{"util/":28}],10:[function(require,module,exports){ -'use strict'; -module.exports = balanced; -function balanced(a, b, str) { - if (a instanceof RegExp) a = maybeMatch(a, str); - if (b instanceof RegExp) b = maybeMatch(b, str); - - var r = range(a, b, str); - - return r && { - start: r[0], - end: r[1], - pre: str.slice(0, r[0]), - body: str.slice(r[0] + a.length, r[1]), - post: str.slice(r[1] + b.length) - }; -} - -function maybeMatch(reg, str) { - var m = str.match(reg); - return m ? m[0] : null; -} - -balanced.range = range; -function range(a, b, str) { - var begs, beg, left, right, result; - var ai = str.indexOf(a); - var bi = str.indexOf(b, ai + 1); - var i = ai; - - if (ai >= 0 && bi > 0) { - begs = []; - left = str.length; - - while (i >= 0 && !result) { - if (i == ai) { - begs.push(i); - ai = str.indexOf(a, i + 1); - } else if (begs.length == 1) { - result = [ begs.pop(), bi ]; - } else { - beg = begs.pop(); - if (beg < left) { - left = beg; - right = bi; - } - - bi = str.indexOf(b, i + 1); - } - - i = ai < bi && ai >= 0 ? ai : bi; - } - - if (begs.length) { - result = [ left, right ]; - } - } - - return result; -} - -},{}],11:[function(require,module,exports){ -var concatMap = require('concat-map'); -var balanced = require('balanced-match'); - -module.exports = expandTop; - -var escSlash = '\0SLASH'+Math.random()+'\0'; -var escOpen = '\0OPEN'+Math.random()+'\0'; -var escClose = '\0CLOSE'+Math.random()+'\0'; -var escComma = '\0COMMA'+Math.random()+'\0'; -var escPeriod = '\0PERIOD'+Math.random()+'\0'; - -function numeric(str) { - return parseInt(str, 10) == str - ? parseInt(str, 10) - : str.charCodeAt(0); -} - -function escapeBraces(str) { - return str.split('\\\\').join(escSlash) - .split('\\{').join(escOpen) - .split('\\}').join(escClose) - .split('\\,').join(escComma) - .split('\\.').join(escPeriod); -} - -function unescapeBraces(str) { - return str.split(escSlash).join('\\') - .split(escOpen).join('{') - .split(escClose).join('}') - .split(escComma).join(',') - .split(escPeriod).join('.'); -} - - -// Basically just str.split(","), but handling cases -// where we have nested braced sections, which should be -// treated as individual members, like {a,{b,c},d} -function parseCommaParts(str) { - if (!str) - return ['']; - - var parts = []; - var m = balanced('{', '}', str); - - if (!m) - return str.split(','); - - var pre = m.pre; - var body = m.body; - var post = m.post; - var p = pre.split(','); - - p[p.length-1] += '{' + body + '}'; - var postParts = parseCommaParts(post); - if (post.length) { - p[p.length-1] += postParts.shift(); - p.push.apply(p, postParts); - } - - parts.push.apply(parts, p); - - return parts; -} - -function expandTop(str) { - if (!str) - return []; - - // I don't know why Bash 4.3 does this, but it does. - // Anything starting with {} will have the first two bytes preserved - // but *only* at the top level, so {},a}b will not expand to anything, - // but a{},b}c will be expanded to [a}c,abc]. - // One could argue that this is a bug in Bash, but since the goal of - // this module is to match Bash's rules, we escape a leading {} - if (str.substr(0, 2) === '{}') { - str = '\\{\\}' + str.substr(2); - } - - return expand(escapeBraces(str), true).map(unescapeBraces); -} - -function identity(e) { - return e; -} - -function embrace(str) { - return '{' + str + '}'; -} -function isPadded(el) { - return /^-?0\d/.test(el); -} - -function lte(i, y) { - return i <= y; -} -function gte(i, y) { - return i >= y; -} - -function expand(str, isTop) { - var expansions = []; - - var m = balanced('{', '}', str); - if (!m || /\$$/.test(m.pre)) return [str]; - - var isNumericSequence = /^-?\d+\.\.-?\d+(?:\.\.-?\d+)?$/.test(m.body); - var isAlphaSequence = /^[a-zA-Z]\.\.[a-zA-Z](?:\.\.-?\d+)?$/.test(m.body); - var isSequence = isNumericSequence || isAlphaSequence; - var isOptions = m.body.indexOf(',') >= 0; - if (!isSequence && !isOptions) { - // {a},b} - if (m.post.match(/,.*\}/)) { - str = m.pre + '{' + m.body + escClose + m.post; - return expand(str); - } - return [str]; - } - - var n; - if (isSequence) { - n = m.body.split(/\.\./); - } else { - n = parseCommaParts(m.body); - if (n.length === 1) { - // x{{a,b}}y ==> x{a}y x{b}y - n = expand(n[0], false).map(embrace); - if (n.length === 1) { - var post = m.post.length - ? expand(m.post, false) - : ['']; - return post.map(function(p) { - return m.pre + n[0] + p; - }); - } - } - } - - // at this point, n is the parts, and we know it's not a comma set - // with a single entry. - - // no need to expand pre, since it is guaranteed to be free of brace-sets - var pre = m.pre; - var post = m.post.length - ? expand(m.post, false) - : ['']; - - var N; - - if (isSequence) { - var x = numeric(n[0]); - var y = numeric(n[1]); - var width = Math.max(n[0].length, n[1].length) - var incr = n.length == 3 - ? Math.abs(numeric(n[2])) - : 1; - var test = lte; - var reverse = y < x; - if (reverse) { - incr *= -1; - test = gte; - } - var pad = n.some(isPadded); - - N = []; - - for (var i = x; test(i, y); i += incr) { - var c; - if (isAlphaSequence) { - c = String.fromCharCode(i); - if (c === '\\') - c = ''; - } else { - c = String(i); - if (pad) { - var need = width - c.length; - if (need > 0) { - var z = new Array(need + 1).join('0'); - if (i < 0) - c = '-' + z + c.slice(1); - else - c = z + c; - } - } - } - N.push(c); - } - } else { - N = concatMap(n, function(el) { return expand(el, false) }); - } - - for (var j = 0; j < N.length; j++) { - for (var k = 0; k < post.length; k++) { - var expansion = pre + N[j] + post[k]; - if (!isTop || isSequence || expansion) - expansions.push(expansion); - } - } - - return expansions; -} - - -},{"balanced-match":10,"concat-map":13}],12:[function(require,module,exports){ - -},{}],13:[function(require,module,exports){ -module.exports = function (xs, fn) { - var res = []; - for (var i = 0; i < xs.length; i++) { - var x = fn(xs[i], i); - if (isArray(x)) res.push.apply(res, x); - else res.push(x); - } - return res; -}; - -var isArray = Array.isArray || function (xs) { - return Object.prototype.toString.call(xs) === '[object Array]'; -}; - -},{}],14:[function(require,module,exports){ -// Copyright Joyent, Inc. and other Node contributors. -// -// Permission is hereby granted, free of charge, to any person obtaining a -// copy of this software and associated documentation files (the -// "Software"), to deal in the Software without restriction, including -// without limitation the rights to use, copy, modify, merge, publish, -// distribute, sublicense, and/or sell copies of the Software, and to permit -// persons to whom the Software is furnished to do so, subject to the -// following conditions: -// -// The above copyright notice and this permission notice shall be included -// in all copies or substantial portions of the Software. -// -// THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS -// OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF -// MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN -// NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, -// DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR -// OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE -// USE OR OTHER DEALINGS IN THE SOFTWARE. - -function EventEmitter() { - this._events = this._events || {}; - this._maxListeners = this._maxListeners || undefined; -} -module.exports = EventEmitter; - -// Backwards-compat with node 0.10.x -EventEmitter.EventEmitter = EventEmitter; - -EventEmitter.prototype._events = undefined; -EventEmitter.prototype._maxListeners = undefined; - -// By default EventEmitters will print a warning if more than 10 listeners are -// added to it. This is a useful default which helps finding memory leaks. -EventEmitter.defaultMaxListeners = 10; - -// Obviously not all Emitters should be limited to 10. This function allows -// that to be increased. Set to zero for unlimited. -EventEmitter.prototype.setMaxListeners = function(n) { - if (!isNumber(n) || n < 0 || isNaN(n)) - throw TypeError('n must be a positive number'); - this._maxListeners = n; - return this; -}; - -EventEmitter.prototype.emit = function(type) { - var er, handler, len, args, i, listeners; - - if (!this._events) - this._events = {}; - - // If there is no 'error' event listener then throw. - if (type === 'error') { - if (!this._events.error || - (isObject(this._events.error) && !this._events.error.length)) { - er = arguments[1]; - if (er instanceof Error) { - throw er; // Unhandled 'error' event - } - throw TypeError('Uncaught, unspecified "error" event.'); - } - } - - handler = this._events[type]; - - if (isUndefined(handler)) - return false; - - if (isFunction(handler)) { - switch (arguments.length) { - // fast cases - case 1: - handler.call(this); - break; - case 2: - handler.call(this, arguments[1]); - break; - case 3: - handler.call(this, arguments[1], arguments[2]); - break; - // slower - default: - len = arguments.length; - args = new Array(len - 1); - for (i = 1; i < len; i++) - args[i - 1] = arguments[i]; - handler.apply(this, args); - } - } else if (isObject(handler)) { - len = arguments.length; - args = new Array(len - 1); - for (i = 1; i < len; i++) - args[i - 1] = arguments[i]; - - listeners = handler.slice(); - len = listeners.length; - for (i = 0; i < len; i++) - listeners[i].apply(this, args); - } - - return true; -}; - -EventEmitter.prototype.addListener = function(type, listener) { - var m; - - if (!isFunction(listener)) - throw TypeError('listener must be a function'); - - if (!this._events) - this._events = {}; - - // To avoid recursion in the case that type === "newListener"! Before - // adding it to the listeners, first emit "newListener". - if (this._events.newListener) - this.emit('newListener', type, - isFunction(listener.listener) ? - listener.listener : listener); - - if (!this._events[type]) - // Optimize the case of one listener. Don't need the extra array object. - this._events[type] = listener; - else if (isObject(this._events[type])) - // If we've already got an array, just append. - this._events[type].push(listener); - else - // Adding the second element, need to change to array. - this._events[type] = [this._events[type], listener]; - - // Check for listener leak - if (isObject(this._events[type]) && !this._events[type].warned) { - var m; - if (!isUndefined(this._maxListeners)) { - m = this._maxListeners; - } else { - m = EventEmitter.defaultMaxListeners; - } - - if (m && m > 0 && this._events[type].length > m) { - this._events[type].warned = true; - console.error('(node) warning: possible EventEmitter memory ' + - 'leak detected. %d listeners added. ' + - 'Use emitter.setMaxListeners() to increase limit.', - this._events[type].length); - if (typeof console.trace === 'function') { - // not supported in IE 10 - console.trace(); - } - } - } - - return this; -}; - -EventEmitter.prototype.on = EventEmitter.prototype.addListener; - -EventEmitter.prototype.once = function(type, listener) { - if (!isFunction(listener)) - throw TypeError('listener must be a function'); - - var fired = false; - - function g() { - this.removeListener(type, g); - - if (!fired) { - fired = true; - listener.apply(this, arguments); - } - } - - g.listener = listener; - this.on(type, g); - - return this; -}; - -// emits a 'removeListener' event iff the listener was removed -EventEmitter.prototype.removeListener = function(type, listener) { - var list, position, length, i; - - if (!isFunction(listener)) - throw TypeError('listener must be a function'); - - if (!this._events || !this._events[type]) - return this; - - list = this._events[type]; - length = list.length; - position = -1; - - if (list === listener || - (isFunction(list.listener) && list.listener === listener)) { - delete this._events[type]; - if (this._events.removeListener) - this.emit('removeListener', type, listener); - - } else if (isObject(list)) { - for (i = length; i-- > 0;) { - if (list[i] === listener || - (list[i].listener && list[i].listener === listener)) { - position = i; - break; - } - } - - if (position < 0) - return this; - - if (list.length === 1) { - list.length = 0; - delete this._events[type]; - } else { - list.splice(position, 1); - } - - if (this._events.removeListener) - this.emit('removeListener', type, listener); - } - - return this; -}; - -EventEmitter.prototype.removeAllListeners = function(type) { - var key, listeners; - - if (!this._events) - return this; - - // not listening for removeListener, no need to emit - if (!this._events.removeListener) { - if (arguments.length === 0) - this._events = {}; - else if (this._events[type]) - delete this._events[type]; - return this; - } - - // emit removeListener for all listeners on all events - if (arguments.length === 0) { - for (key in this._events) { - if (key === 'removeListener') continue; - this.removeAllListeners(key); - } - this.removeAllListeners('removeListener'); - this._events = {}; - return this; - } - - listeners = this._events[type]; - - if (isFunction(listeners)) { - this.removeListener(type, listeners); - } else { - // LIFO order - while (listeners.length) - this.removeListener(type, listeners[listeners.length - 1]); - } - delete this._events[type]; - - return this; -}; - -EventEmitter.prototype.listeners = function(type) { - var ret; - if (!this._events || !this._events[type]) - ret = []; - else if (isFunction(this._events[type])) - ret = [this._events[type]]; - else - ret = this._events[type].slice(); - return ret; -}; - -EventEmitter.listenerCount = function(emitter, type) { - var ret; - if (!emitter._events || !emitter._events[type]) - ret = 0; - else if (isFunction(emitter._events[type])) - ret = 1; - else - ret = emitter._events[type].length; - return ret; -}; - -function isFunction(arg) { - return typeof arg === 'function'; -} - -function isNumber(arg) { - return typeof arg === 'number'; -} - -function isObject(arg) { - return typeof arg === 'object' && arg !== null; -} - -function isUndefined(arg) { - return arg === void 0; -} - -},{}],15:[function(require,module,exports){ -(function (process){ -exports.alphasort = alphasort -exports.alphasorti = alphasorti -exports.setopts = setopts -exports.ownProp = ownProp -exports.makeAbs = makeAbs -exports.finish = finish -exports.mark = mark -exports.isIgnored = isIgnored -exports.childrenIgnored = childrenIgnored - -function ownProp (obj, field) { - return Object.prototype.hasOwnProperty.call(obj, field) -} - -var path = require("path") -var minimatch = require("minimatch") -var isAbsolute = require("path-is-absolute") -var Minimatch = minimatch.Minimatch - -function alphasorti (a, b) { - return a.toLowerCase().localeCompare(b.toLowerCase()) -} - -function alphasort (a, b) { - return a.localeCompare(b) -} - -function setupIgnores (self, options) { - self.ignore = options.ignore || [] - - if (!Array.isArray(self.ignore)) - self.ignore = [self.ignore] - - if (self.ignore.length) { - self.ignore = self.ignore.map(ignoreMap) - } -} - -function ignoreMap (pattern) { - var gmatcher = null - if (pattern.slice(-3) === '/**') { - var gpattern = pattern.replace(/(\/\*\*)+$/, '') - gmatcher = new Minimatch(gpattern) - } - - return { - matcher: new Minimatch(pattern), - gmatcher: gmatcher - } -} - -function setopts (self, pattern, options) { - if (!options) - options = {} - - // base-matching: just use globstar for that. - if (options.matchBase && -1 === pattern.indexOf("/")) { - if (options.noglobstar) { - throw new Error("base matching requires globstar") - } - pattern = "**/" + pattern - } - - self.silent = !!options.silent - self.pattern = pattern - self.strict = options.strict !== false - self.realpath = !!options.realpath - self.realpathCache = options.realpathCache || Object.create(null) - self.follow = !!options.follow - self.dot = !!options.dot - self.mark = !!options.mark - self.nodir = !!options.nodir - if (self.nodir) - self.mark = true - self.sync = !!options.sync - self.nounique = !!options.nounique - self.nonull = !!options.nonull - self.nosort = !!options.nosort - self.nocase = !!options.nocase - self.stat = !!options.stat - self.noprocess = !!options.noprocess - - self.maxLength = options.maxLength || Infinity - self.cache = options.cache || Object.create(null) - self.statCache = options.statCache || Object.create(null) - self.symlinks = options.symlinks || Object.create(null) - - setupIgnores(self, options) - - self.changedCwd = false - var cwd = process.cwd() - if (!ownProp(options, "cwd")) - self.cwd = cwd - else { - self.cwd = options.cwd - self.changedCwd = path.resolve(options.cwd) !== cwd - } - - self.root = options.root || path.resolve(self.cwd, "/") - self.root = path.resolve(self.root) - if (process.platform === "win32") - self.root = self.root.replace(/\\/g, "/") - - self.nomount = !!options.nomount - - // disable comments and negation unless the user explicitly - // passes in false as the option. - options.nonegate = options.nonegate === false ? false : true - options.nocomment = options.nocomment === false ? false : true - deprecationWarning(options) - - self.minimatch = new Minimatch(pattern, options) - self.options = self.minimatch.options -} - -// TODO(isaacs): remove entirely in v6 -// exported to reset in tests -exports.deprecationWarned -function deprecationWarning(options) { - if (!options.nonegate || !options.nocomment) { - if (process.noDeprecation !== true && !exports.deprecationWarned) { - var msg = 'glob WARNING: comments and negation will be disabled in v6' - if (process.throwDeprecation) - throw new Error(msg) - else if (process.traceDeprecation) - console.trace(msg) - else - console.error(msg) - - exports.deprecationWarned = true - } - } -} - -function finish (self) { - var nou = self.nounique - var all = nou ? [] : Object.create(null) - - for (var i = 0, l = self.matches.length; i < l; i ++) { - var matches = self.matches[i] - if (!matches || Object.keys(matches).length === 0) { - if (self.nonull) { - // do like the shell, and spit out the literal glob - var literal = self.minimatch.globSet[i] - if (nou) - all.push(literal) - else - all[literal] = true - } - } else { - // had matches - var m = Object.keys(matches) - if (nou) - all.push.apply(all, m) - else - m.forEach(function (m) { - all[m] = true - }) - } - } - - if (!nou) - all = Object.keys(all) - - if (!self.nosort) - all = all.sort(self.nocase ? alphasorti : alphasort) - - // at *some* point we statted all of these - if (self.mark) { - for (var i = 0; i < all.length; i++) { - all[i] = self._mark(all[i]) - } - if (self.nodir) { - all = all.filter(function (e) { - return !(/\/$/.test(e)) - }) - } - } - - if (self.ignore.length) - all = all.filter(function(m) { - return !isIgnored(self, m) - }) - - self.found = all -} - -function mark (self, p) { - var abs = makeAbs(self, p) - var c = self.cache[abs] - var m = p - if (c) { - var isDir = c === 'DIR' || Array.isArray(c) - var slash = p.slice(-1) === '/' - - if (isDir && !slash) - m += '/' - else if (!isDir && slash) - m = m.slice(0, -1) - - if (m !== p) { - var mabs = makeAbs(self, m) - self.statCache[mabs] = self.statCache[abs] - self.cache[mabs] = self.cache[abs] - } - } - - return m -} - -// lotta situps... -function makeAbs (self, f) { - var abs = f - if (f.charAt(0) === '/') { - abs = path.join(self.root, f) - } else if (isAbsolute(f) || f === '') { - abs = f - } else if (self.changedCwd) { - abs = path.resolve(self.cwd, f) - } else { - abs = path.resolve(f) - } - return abs -} - - -// Return true, if pattern ends with globstar '**', for the accompanying parent directory. -// Ex:- If node_modules/** is the pattern, add 'node_modules' to ignore list along with it's contents -function isIgnored (self, path) { - if (!self.ignore.length) - return false - - return self.ignore.some(function(item) { - return item.matcher.match(path) || !!(item.gmatcher && item.gmatcher.match(path)) - }) -} - -function childrenIgnored (self, path) { - if (!self.ignore.length) - return false - - return self.ignore.some(function(item) { - return !!(item.gmatcher && item.gmatcher.match(path)) - }) -} - -}).call(this,require('_process')) -},{"_process":24,"minimatch":20,"path":22,"path-is-absolute":23}],16:[function(require,module,exports){ -(function (process){ -// Approach: -// -// 1. Get the minimatch set -// 2. For each pattern in the set, PROCESS(pattern, false) -// 3. Store matches per-set, then uniq them -// -// PROCESS(pattern, inGlobStar) -// Get the first [n] items from pattern that are all strings -// Join these together. This is PREFIX. -// If there is no more remaining, then stat(PREFIX) and -// add to matches if it succeeds. END. -// -// If inGlobStar and PREFIX is symlink and points to dir -// set ENTRIES = [] -// else readdir(PREFIX) as ENTRIES -// If fail, END -// -// with ENTRIES -// If pattern[n] is GLOBSTAR -// // handle the case where the globstar match is empty -// // by pruning it out, and testing the resulting pattern -// PROCESS(pattern[0..n] + pattern[n+1 .. $], false) -// // handle other cases. -// for ENTRY in ENTRIES (not dotfiles) -// // attach globstar + tail onto the entry -// // Mark that this entry is a globstar match -// PROCESS(pattern[0..n] + ENTRY + pattern[n .. $], true) -// -// else // not globstar -// for ENTRY in ENTRIES (not dotfiles, unless pattern[n] is dot) -// Test ENTRY against pattern[n] -// If fails, continue -// If passes, PROCESS(pattern[0..n] + item + pattern[n+1 .. $]) -// -// Caveat: -// Cache all stats and readdirs results to minimize syscall. Since all -// we ever care about is existence and directory-ness, we can just keep -// `true` for files, and [children,...] for directories, or `false` for -// things that don't exist. - -module.exports = glob - -var fs = require('fs') -var minimatch = require('minimatch') -var Minimatch = minimatch.Minimatch -var inherits = require('inherits') -var EE = require('events').EventEmitter -var path = require('path') -var assert = require('assert') -var isAbsolute = require('path-is-absolute') -var globSync = require('./sync.js') -var common = require('./common.js') -var alphasort = common.alphasort -var alphasorti = common.alphasorti -var setopts = common.setopts -var ownProp = common.ownProp -var inflight = require('inflight') -var util = require('util') -var childrenIgnored = common.childrenIgnored -var isIgnored = common.isIgnored - -var once = require('once') - -function glob (pattern, options, cb) { - if (typeof options === 'function') cb = options, options = {} - if (!options) options = {} - - if (options.sync) { - if (cb) - throw new TypeError('callback provided to sync glob') - return globSync(pattern, options) - } - - return new Glob(pattern, options, cb) -} - -glob.sync = globSync -var GlobSync = glob.GlobSync = globSync.GlobSync - -// old api surface -glob.glob = glob - -glob.hasMagic = function (pattern, options_) { - var options = util._extend({}, options_) - options.noprocess = true - - var g = new Glob(pattern, options) - var set = g.minimatch.set - if (set.length > 1) - return true - - for (var j = 0; j < set[0].length; j++) { - if (typeof set[0][j] !== 'string') - return true - } - - return false -} - -glob.Glob = Glob -inherits(Glob, EE) -function Glob (pattern, options, cb) { - if (typeof options === 'function') { - cb = options - options = null - } - - if (options && options.sync) { - if (cb) - throw new TypeError('callback provided to sync glob') - return new GlobSync(pattern, options) - } - - if (!(this instanceof Glob)) - return new Glob(pattern, options, cb) - - setopts(this, pattern, options) - this._didRealPath = false - - // process each pattern in the minimatch set - var n = this.minimatch.set.length - - // The matches are stored as {: true,...} so that - // duplicates are automagically pruned. - // Later, we do an Object.keys() on these. - // Keep them as a list so we can fill in when nonull is set. - this.matches = new Array(n) - - if (typeof cb === 'function') { - cb = once(cb) - this.on('error', cb) - this.on('end', function (matches) { - cb(null, matches) - }) - } - - var self = this - var n = this.minimatch.set.length - this._processing = 0 - this.matches = new Array(n) - - this._emitQueue = [] - this._processQueue = [] - this.paused = false - - if (this.noprocess) - return this - - if (n === 0) - return done() - - for (var i = 0; i < n; i ++) { - this._process(this.minimatch.set[i], i, false, done) - } - - function done () { - --self._processing - if (self._processing <= 0) - self._finish() - } -} - -Glob.prototype._finish = function () { - assert(this instanceof Glob) - if (this.aborted) - return - - if (this.realpath && !this._didRealpath) - return this._realpath() - - common.finish(this) - this.emit('end', this.found) -} - -Glob.prototype._realpath = function () { - if (this._didRealpath) - return - - this._didRealpath = true - - var n = this.matches.length - if (n === 0) - return this._finish() - - var self = this - for (var i = 0; i < this.matches.length; i++) - this._realpathSet(i, next) - - function next () { - if (--n === 0) - self._finish() - } -} - -Glob.prototype._realpathSet = function (index, cb) { - var matchset = this.matches[index] - if (!matchset) - return cb() - - var found = Object.keys(matchset) - var self = this - var n = found.length - - if (n === 0) - return cb() - - var set = this.matches[index] = Object.create(null) - found.forEach(function (p, i) { - // If there's a problem with the stat, then it means that - // one or more of the links in the realpath couldn't be - // resolved. just return the abs value in that case. - p = self._makeAbs(p) - fs.realpath(p, self.realpathCache, function (er, real) { - if (!er) - set[real] = true - else if (er.syscall === 'stat') - set[p] = true - else - self.emit('error', er) // srsly wtf right here - - if (--n === 0) { - self.matches[index] = set - cb() - } - }) - }) -} - -Glob.prototype._mark = function (p) { - return common.mark(this, p) -} - -Glob.prototype._makeAbs = function (f) { - return common.makeAbs(this, f) -} - -Glob.prototype.abort = function () { - this.aborted = true - this.emit('abort') -} - -Glob.prototype.pause = function () { - if (!this.paused) { - this.paused = true - this.emit('pause') - } -} - -Glob.prototype.resume = function () { - if (this.paused) { - this.emit('resume') - this.paused = false - if (this._emitQueue.length) { - var eq = this._emitQueue.slice(0) - this._emitQueue.length = 0 - for (var i = 0; i < eq.length; i ++) { - var e = eq[i] - this._emitMatch(e[0], e[1]) - } - } - if (this._processQueue.length) { - var pq = this._processQueue.slice(0) - this._processQueue.length = 0 - for (var i = 0; i < pq.length; i ++) { - var p = pq[i] - this._processing-- - this._process(p[0], p[1], p[2], p[3]) - } - } - } -} - -Glob.prototype._process = function (pattern, index, inGlobStar, cb) { - assert(this instanceof Glob) - assert(typeof cb === 'function') - - if (this.aborted) - return - - this._processing++ - if (this.paused) { - this._processQueue.push([pattern, index, inGlobStar, cb]) - return - } - - //console.error('PROCESS %d', this._processing, pattern) - - // Get the first [n] parts of pattern that are all strings. - var n = 0 - while (typeof pattern[n] === 'string') { - n ++ - } - // now n is the index of the first one that is *not* a string. - - // see if there's anything else - var prefix - switch (n) { - // if not, then this is rather simple - case pattern.length: - this._processSimple(pattern.join('/'), index, cb) - return - - case 0: - // pattern *starts* with some non-trivial item. - // going to readdir(cwd), but not include the prefix in matches. - prefix = null - break - - default: - // pattern has some string bits in the front. - // whatever it starts with, whether that's 'absolute' like /foo/bar, - // or 'relative' like '../baz' - prefix = pattern.slice(0, n).join('/') - break - } - - var remain = pattern.slice(n) - - // get the list of entries. - var read - if (prefix === null) - read = '.' - else if (isAbsolute(prefix) || isAbsolute(pattern.join('/'))) { - if (!prefix || !isAbsolute(prefix)) - prefix = '/' + prefix - read = prefix - } else - read = prefix - - var abs = this._makeAbs(read) - - //if ignored, skip _processing - if (childrenIgnored(this, read)) - return cb() - - var isGlobStar = remain[0] === minimatch.GLOBSTAR - if (isGlobStar) - this._processGlobStar(prefix, read, abs, remain, index, inGlobStar, cb) - else - this._processReaddir(prefix, read, abs, remain, index, inGlobStar, cb) -} - -Glob.prototype._processReaddir = function (prefix, read, abs, remain, index, inGlobStar, cb) { - var self = this - this._readdir(abs, inGlobStar, function (er, entries) { - return self._processReaddir2(prefix, read, abs, remain, index, inGlobStar, entries, cb) - }) -} - -Glob.prototype._processReaddir2 = function (prefix, read, abs, remain, index, inGlobStar, entries, cb) { - - // if the abs isn't a dir, then nothing can match! - if (!entries) - return cb() - - // It will only match dot entries if it starts with a dot, or if - // dot is set. Stuff like @(.foo|.bar) isn't allowed. - var pn = remain[0] - var negate = !!this.minimatch.negate - var rawGlob = pn._glob - var dotOk = this.dot || rawGlob.charAt(0) === '.' - - var matchedEntries = [] - for (var i = 0; i < entries.length; i++) { - var e = entries[i] - if (e.charAt(0) !== '.' || dotOk) { - var m - if (negate && !prefix) { - m = !e.match(pn) - } else { - m = e.match(pn) - } - if (m) - matchedEntries.push(e) - } - } - - //console.error('prd2', prefix, entries, remain[0]._glob, matchedEntries) - - var len = matchedEntries.length - // If there are no matched entries, then nothing matches. - if (len === 0) - return cb() - - // if this is the last remaining pattern bit, then no need for - // an additional stat *unless* the user has specified mark or - // stat explicitly. We know they exist, since readdir returned - // them. - - if (remain.length === 1 && !this.mark && !this.stat) { - if (!this.matches[index]) - this.matches[index] = Object.create(null) - - for (var i = 0; i < len; i ++) { - var e = matchedEntries[i] - if (prefix) { - if (prefix !== '/') - e = prefix + '/' + e - else - e = prefix + e - } - - if (e.charAt(0) === '/' && !this.nomount) { - e = path.join(this.root, e) - } - this._emitMatch(index, e) - } - // This was the last one, and no stats were needed - return cb() - } - - // now test all matched entries as stand-ins for that part - // of the pattern. - remain.shift() - for (var i = 0; i < len; i ++) { - var e = matchedEntries[i] - var newPattern - if (prefix) { - if (prefix !== '/') - e = prefix + '/' + e - else - e = prefix + e - } - this._process([e].concat(remain), index, inGlobStar, cb) - } - cb() -} - -Glob.prototype._emitMatch = function (index, e) { - if (this.aborted) - return - - if (this.matches[index][e]) - return - - if (isIgnored(this, e)) - return - - if (this.paused) { - this._emitQueue.push([index, e]) - return - } - - var abs = this._makeAbs(e) - - if (this.nodir) { - var c = this.cache[abs] - if (c === 'DIR' || Array.isArray(c)) - return - } - - if (this.mark) - e = this._mark(e) - - this.matches[index][e] = true - - var st = this.statCache[abs] - if (st) - this.emit('stat', e, st) - - this.emit('match', e) -} - -Glob.prototype._readdirInGlobStar = function (abs, cb) { - if (this.aborted) - return - - // follow all symlinked directories forever - // just proceed as if this is a non-globstar situation - if (this.follow) - return this._readdir(abs, false, cb) - - var lstatkey = 'lstat\0' + abs - var self = this - var lstatcb = inflight(lstatkey, lstatcb_) - - if (lstatcb) - fs.lstat(abs, lstatcb) - - function lstatcb_ (er, lstat) { - if (er) - return cb() - - var isSym = lstat.isSymbolicLink() - self.symlinks[abs] = isSym - - // If it's not a symlink or a dir, then it's definitely a regular file. - // don't bother doing a readdir in that case. - if (!isSym && !lstat.isDirectory()) { - self.cache[abs] = 'FILE' - cb() - } else - self._readdir(abs, false, cb) - } -} - -Glob.prototype._readdir = function (abs, inGlobStar, cb) { - if (this.aborted) - return - - cb = inflight('readdir\0'+abs+'\0'+inGlobStar, cb) - if (!cb) - return - - //console.error('RD %j %j', +inGlobStar, abs) - if (inGlobStar && !ownProp(this.symlinks, abs)) - return this._readdirInGlobStar(abs, cb) - - if (ownProp(this.cache, abs)) { - var c = this.cache[abs] - if (!c || c === 'FILE') - return cb() - - if (Array.isArray(c)) - return cb(null, c) - } - - var self = this - fs.readdir(abs, readdirCb(this, abs, cb)) -} - -function readdirCb (self, abs, cb) { - return function (er, entries) { - if (er) - self._readdirError(abs, er, cb) - else - self._readdirEntries(abs, entries, cb) - } -} - -Glob.prototype._readdirEntries = function (abs, entries, cb) { - if (this.aborted) - return - - // if we haven't asked to stat everything, then just - // assume that everything in there exists, so we can avoid - // having to stat it a second time. - if (!this.mark && !this.stat) { - for (var i = 0; i < entries.length; i ++) { - var e = entries[i] - if (abs === '/') - e = abs + e - else - e = abs + '/' + e - this.cache[e] = true - } - } - - this.cache[abs] = entries - return cb(null, entries) -} - -Glob.prototype._readdirError = function (f, er, cb) { - if (this.aborted) - return - - // handle errors, and cache the information - switch (er.code) { - case 'ENOTSUP': // https://github.com/isaacs/node-glob/issues/205 - case 'ENOTDIR': // totally normal. means it *does* exist. - this.cache[this._makeAbs(f)] = 'FILE' - break - - case 'ENOENT': // not terribly unusual - case 'ELOOP': - case 'ENAMETOOLONG': - case 'UNKNOWN': - this.cache[this._makeAbs(f)] = false - break - - default: // some unusual error. Treat as failure. - this.cache[this._makeAbs(f)] = false - if (this.strict) { - this.emit('error', er) - // If the error is handled, then we abort - // if not, we threw out of here - this.abort() - } - if (!this.silent) - console.error('glob error', er) - break - } - - return cb() -} - -Glob.prototype._processGlobStar = function (prefix, read, abs, remain, index, inGlobStar, cb) { - var self = this - this._readdir(abs, inGlobStar, function (er, entries) { - self._processGlobStar2(prefix, read, abs, remain, index, inGlobStar, entries, cb) - }) -} - - -Glob.prototype._processGlobStar2 = function (prefix, read, abs, remain, index, inGlobStar, entries, cb) { - //console.error('pgs2', prefix, remain[0], entries) - - // no entries means not a dir, so it can never have matches - // foo.txt/** doesn't match foo.txt - if (!entries) - return cb() - - // test without the globstar, and with every child both below - // and replacing the globstar. - var remainWithoutGlobStar = remain.slice(1) - var gspref = prefix ? [ prefix ] : [] - var noGlobStar = gspref.concat(remainWithoutGlobStar) - - // the noGlobStar pattern exits the inGlobStar state - this._process(noGlobStar, index, false, cb) - - var isSym = this.symlinks[abs] - var len = entries.length - - // If it's a symlink, and we're in a globstar, then stop - if (isSym && inGlobStar) - return cb() - - for (var i = 0; i < len; i++) { - var e = entries[i] - if (e.charAt(0) === '.' && !this.dot) - continue - - // these two cases enter the inGlobStar state - var instead = gspref.concat(entries[i], remainWithoutGlobStar) - this._process(instead, index, true, cb) - - var below = gspref.concat(entries[i], remain) - this._process(below, index, true, cb) - } - - cb() -} - -Glob.prototype._processSimple = function (prefix, index, cb) { - // XXX review this. Shouldn't it be doing the mounting etc - // before doing stat? kinda weird? - var self = this - this._stat(prefix, function (er, exists) { - self._processSimple2(prefix, index, er, exists, cb) - }) -} -Glob.prototype._processSimple2 = function (prefix, index, er, exists, cb) { - - //console.error('ps2', prefix, exists) - - if (!this.matches[index]) - this.matches[index] = Object.create(null) - - // If it doesn't exist, then just mark the lack of results - if (!exists) - return cb() - - if (prefix && isAbsolute(prefix) && !this.nomount) { - var trail = /[\/\\]$/.test(prefix) - if (prefix.charAt(0) === '/') { - prefix = path.join(this.root, prefix) - } else { - prefix = path.resolve(this.root, prefix) - if (trail) - prefix += '/' - } - } - - if (process.platform === 'win32') - prefix = prefix.replace(/\\/g, '/') - - // Mark this as a match - this._emitMatch(index, prefix) - cb() -} - -// Returns either 'DIR', 'FILE', or false -Glob.prototype._stat = function (f, cb) { - var abs = this._makeAbs(f) - var needDir = f.slice(-1) === '/' - - if (f.length > this.maxLength) - return cb() - - if (!this.stat && ownProp(this.cache, abs)) { - var c = this.cache[abs] - - if (Array.isArray(c)) - c = 'DIR' - - // It exists, but maybe not how we need it - if (!needDir || c === 'DIR') - return cb(null, c) - - if (needDir && c === 'FILE') - return cb() - - // otherwise we have to stat, because maybe c=true - // if we know it exists, but not what it is. - } - - var exists - var stat = this.statCache[abs] - if (stat !== undefined) { - if (stat === false) - return cb(null, stat) - else { - var type = stat.isDirectory() ? 'DIR' : 'FILE' - if (needDir && type === 'FILE') - return cb() - else - return cb(null, type, stat) - } - } - - var self = this - var statcb = inflight('stat\0' + abs, lstatcb_) - if (statcb) - fs.lstat(abs, statcb) - - function lstatcb_ (er, lstat) { - if (lstat && lstat.isSymbolicLink()) { - // If it's a symlink, then treat it as the target, unless - // the target does not exist, then treat it as a file. - return fs.stat(abs, function (er, stat) { - if (er) - self._stat2(f, abs, null, lstat, cb) - else - self._stat2(f, abs, er, stat, cb) - }) - } else { - self._stat2(f, abs, er, lstat, cb) - } - } -} - -Glob.prototype._stat2 = function (f, abs, er, stat, cb) { - if (er) { - this.statCache[abs] = false - return cb() - } - - var needDir = f.slice(-1) === '/' - this.statCache[abs] = stat - - if (abs.slice(-1) === '/' && !stat.isDirectory()) - return cb(null, false, stat) - - var c = stat.isDirectory() ? 'DIR' : 'FILE' - this.cache[abs] = this.cache[abs] || c - - if (needDir && c !== 'DIR') - return cb() - - return cb(null, c, stat) -} - -}).call(this,require('_process')) -},{"./common.js":15,"./sync.js":17,"_process":24,"assert":9,"events":14,"fs":12,"inflight":18,"inherits":19,"minimatch":20,"once":21,"path":22,"path-is-absolute":23,"util":28}],17:[function(require,module,exports){ -(function (process){ -module.exports = globSync -globSync.GlobSync = GlobSync - -var fs = require('fs') -var minimatch = require('minimatch') -var Minimatch = minimatch.Minimatch -var Glob = require('./glob.js').Glob -var util = require('util') -var path = require('path') -var assert = require('assert') -var isAbsolute = require('path-is-absolute') -var common = require('./common.js') -var alphasort = common.alphasort -var alphasorti = common.alphasorti -var setopts = common.setopts -var ownProp = common.ownProp -var childrenIgnored = common.childrenIgnored - -function globSync (pattern, options) { - if (typeof options === 'function' || arguments.length === 3) - throw new TypeError('callback provided to sync glob\n'+ - 'See: https://github.com/isaacs/node-glob/issues/167') - - return new GlobSync(pattern, options).found -} - -function GlobSync (pattern, options) { - if (!pattern) - throw new Error('must provide pattern') - - if (typeof options === 'function' || arguments.length === 3) - throw new TypeError('callback provided to sync glob\n'+ - 'See: https://github.com/isaacs/node-glob/issues/167') - - if (!(this instanceof GlobSync)) - return new GlobSync(pattern, options) - - setopts(this, pattern, options) - - if (this.noprocess) - return this - - var n = this.minimatch.set.length - this.matches = new Array(n) - for (var i = 0; i < n; i ++) { - this._process(this.minimatch.set[i], i, false) - } - this._finish() -} - -GlobSync.prototype._finish = function () { - assert(this instanceof GlobSync) - if (this.realpath) { - var self = this - this.matches.forEach(function (matchset, index) { - var set = self.matches[index] = Object.create(null) - for (var p in matchset) { - try { - p = self._makeAbs(p) - var real = fs.realpathSync(p, self.realpathCache) - set[real] = true - } catch (er) { - if (er.syscall === 'stat') - set[self._makeAbs(p)] = true - else - throw er - } - } - }) - } - common.finish(this) -} - - -GlobSync.prototype._process = function (pattern, index, inGlobStar) { - assert(this instanceof GlobSync) - - // Get the first [n] parts of pattern that are all strings. - var n = 0 - while (typeof pattern[n] === 'string') { - n ++ - } - // now n is the index of the first one that is *not* a string. - - // See if there's anything else - var prefix - switch (n) { - // if not, then this is rather simple - case pattern.length: - this._processSimple(pattern.join('/'), index) - return - - case 0: - // pattern *starts* with some non-trivial item. - // going to readdir(cwd), but not include the prefix in matches. - prefix = null - break - - default: - // pattern has some string bits in the front. - // whatever it starts with, whether that's 'absolute' like /foo/bar, - // or 'relative' like '../baz' - prefix = pattern.slice(0, n).join('/') - break - } - - var remain = pattern.slice(n) - - // get the list of entries. - var read - if (prefix === null) - read = '.' - else if (isAbsolute(prefix) || isAbsolute(pattern.join('/'))) { - if (!prefix || !isAbsolute(prefix)) - prefix = '/' + prefix - read = prefix - } else - read = prefix - - var abs = this._makeAbs(read) - - //if ignored, skip processing - if (childrenIgnored(this, read)) - return - - var isGlobStar = remain[0] === minimatch.GLOBSTAR - if (isGlobStar) - this._processGlobStar(prefix, read, abs, remain, index, inGlobStar) - else - this._processReaddir(prefix, read, abs, remain, index, inGlobStar) -} - - -GlobSync.prototype._processReaddir = function (prefix, read, abs, remain, index, inGlobStar) { - var entries = this._readdir(abs, inGlobStar) - - // if the abs isn't a dir, then nothing can match! - if (!entries) - return - - // It will only match dot entries if it starts with a dot, or if - // dot is set. Stuff like @(.foo|.bar) isn't allowed. - var pn = remain[0] - var negate = !!this.minimatch.negate - var rawGlob = pn._glob - var dotOk = this.dot || rawGlob.charAt(0) === '.' - - var matchedEntries = [] - for (var i = 0; i < entries.length; i++) { - var e = entries[i] - if (e.charAt(0) !== '.' || dotOk) { - var m - if (negate && !prefix) { - m = !e.match(pn) - } else { - m = e.match(pn) - } - if (m) - matchedEntries.push(e) - } - } - - var len = matchedEntries.length - // If there are no matched entries, then nothing matches. - if (len === 0) - return - - // if this is the last remaining pattern bit, then no need for - // an additional stat *unless* the user has specified mark or - // stat explicitly. We know they exist, since readdir returned - // them. - - if (remain.length === 1 && !this.mark && !this.stat) { - if (!this.matches[index]) - this.matches[index] = Object.create(null) - - for (var i = 0; i < len; i ++) { - var e = matchedEntries[i] - if (prefix) { - if (prefix.slice(-1) !== '/') - e = prefix + '/' + e - else - e = prefix + e - } - - if (e.charAt(0) === '/' && !this.nomount) { - e = path.join(this.root, e) - } - this.matches[index][e] = true - } - // This was the last one, and no stats were needed - return - } - - // now test all matched entries as stand-ins for that part - // of the pattern. - remain.shift() - for (var i = 0; i < len; i ++) { - var e = matchedEntries[i] - var newPattern - if (prefix) - newPattern = [prefix, e] - else - newPattern = [e] - this._process(newPattern.concat(remain), index, inGlobStar) - } -} - - -GlobSync.prototype._emitMatch = function (index, e) { - var abs = this._makeAbs(e) - if (this.mark) - e = this._mark(e) - - if (this.matches[index][e]) - return - - if (this.nodir) { - var c = this.cache[this._makeAbs(e)] - if (c === 'DIR' || Array.isArray(c)) - return - } - - this.matches[index][e] = true - if (this.stat) - this._stat(e) -} - - -GlobSync.prototype._readdirInGlobStar = function (abs) { - // follow all symlinked directories forever - // just proceed as if this is a non-globstar situation - if (this.follow) - return this._readdir(abs, false) - - var entries - var lstat - var stat - try { - lstat = fs.lstatSync(abs) - } catch (er) { - // lstat failed, doesn't exist - return null - } - - var isSym = lstat.isSymbolicLink() - this.symlinks[abs] = isSym - - // If it's not a symlink or a dir, then it's definitely a regular file. - // don't bother doing a readdir in that case. - if (!isSym && !lstat.isDirectory()) - this.cache[abs] = 'FILE' - else - entries = this._readdir(abs, false) - - return entries -} - -GlobSync.prototype._readdir = function (abs, inGlobStar) { - var entries - - if (inGlobStar && !ownProp(this.symlinks, abs)) - return this._readdirInGlobStar(abs) - - if (ownProp(this.cache, abs)) { - var c = this.cache[abs] - if (!c || c === 'FILE') - return null - - if (Array.isArray(c)) - return c - } - - try { - return this._readdirEntries(abs, fs.readdirSync(abs)) - } catch (er) { - this._readdirError(abs, er) - return null - } -} - -GlobSync.prototype._readdirEntries = function (abs, entries) { - // if we haven't asked to stat everything, then just - // assume that everything in there exists, so we can avoid - // having to stat it a second time. - if (!this.mark && !this.stat) { - for (var i = 0; i < entries.length; i ++) { - var e = entries[i] - if (abs === '/') - e = abs + e - else - e = abs + '/' + e - this.cache[e] = true - } - } - - this.cache[abs] = entries - - // mark and cache dir-ness - return entries -} - -GlobSync.prototype._readdirError = function (f, er) { - // handle errors, and cache the information - switch (er.code) { - case 'ENOTSUP': // https://github.com/isaacs/node-glob/issues/205 - case 'ENOTDIR': // totally normal. means it *does* exist. - this.cache[this._makeAbs(f)] = 'FILE' - break - - case 'ENOENT': // not terribly unusual - case 'ELOOP': - case 'ENAMETOOLONG': - case 'UNKNOWN': - this.cache[this._makeAbs(f)] = false - break - - default: // some unusual error. Treat as failure. - this.cache[this._makeAbs(f)] = false - if (this.strict) - throw er - if (!this.silent) - console.error('glob error', er) - break - } -} - -GlobSync.prototype._processGlobStar = function (prefix, read, abs, remain, index, inGlobStar) { - - var entries = this._readdir(abs, inGlobStar) - - // no entries means not a dir, so it can never have matches - // foo.txt/** doesn't match foo.txt - if (!entries) - return - - // test without the globstar, and with every child both below - // and replacing the globstar. - var remainWithoutGlobStar = remain.slice(1) - var gspref = prefix ? [ prefix ] : [] - var noGlobStar = gspref.concat(remainWithoutGlobStar) - - // the noGlobStar pattern exits the inGlobStar state - this._process(noGlobStar, index, false) - - var len = entries.length - var isSym = this.symlinks[abs] - - // If it's a symlink, and we're in a globstar, then stop - if (isSym && inGlobStar) - return - - for (var i = 0; i < len; i++) { - var e = entries[i] - if (e.charAt(0) === '.' && !this.dot) - continue - - // these two cases enter the inGlobStar state - var instead = gspref.concat(entries[i], remainWithoutGlobStar) - this._process(instead, index, true) - - var below = gspref.concat(entries[i], remain) - this._process(below, index, true) - } -} - -GlobSync.prototype._processSimple = function (prefix, index) { - // XXX review this. Shouldn't it be doing the mounting etc - // before doing stat? kinda weird? - var exists = this._stat(prefix) - - if (!this.matches[index]) - this.matches[index] = Object.create(null) - - // If it doesn't exist, then just mark the lack of results - if (!exists) - return - - if (prefix && isAbsolute(prefix) && !this.nomount) { - var trail = /[\/\\]$/.test(prefix) - if (prefix.charAt(0) === '/') { - prefix = path.join(this.root, prefix) - } else { - prefix = path.resolve(this.root, prefix) - if (trail) - prefix += '/' - } - } - - if (process.platform === 'win32') - prefix = prefix.replace(/\\/g, '/') - - // Mark this as a match - this.matches[index][prefix] = true -} - -// Returns either 'DIR', 'FILE', or false -GlobSync.prototype._stat = function (f) { - var abs = this._makeAbs(f) - var needDir = f.slice(-1) === '/' - - if (f.length > this.maxLength) - return false - - if (!this.stat && ownProp(this.cache, abs)) { - var c = this.cache[abs] - - if (Array.isArray(c)) - c = 'DIR' - - // It exists, but maybe not how we need it - if (!needDir || c === 'DIR') - return c - - if (needDir && c === 'FILE') - return false - - // otherwise we have to stat, because maybe c=true - // if we know it exists, but not what it is. - } - - var exists - var stat = this.statCache[abs] - if (!stat) { - var lstat - try { - lstat = fs.lstatSync(abs) - } catch (er) { - return false - } - - if (lstat.isSymbolicLink()) { - try { - stat = fs.statSync(abs) - } catch (er) { - stat = lstat - } - } else { - stat = lstat - } - } - - this.statCache[abs] = stat - - var c = stat.isDirectory() ? 'DIR' : 'FILE' - this.cache[abs] = this.cache[abs] || c - - if (needDir && c !== 'DIR') - return false - - return c -} - -GlobSync.prototype._mark = function (p) { - return common.mark(this, p) -} - -GlobSync.prototype._makeAbs = function (f) { - return common.makeAbs(this, f) -} - -}).call(this,require('_process')) -},{"./common.js":15,"./glob.js":16,"_process":24,"assert":9,"fs":12,"minimatch":20,"path":22,"path-is-absolute":23,"util":28}],18:[function(require,module,exports){ -(function (process){ -var wrappy = require('wrappy') -var reqs = Object.create(null) -var once = require('once') - -module.exports = wrappy(inflight) - -function inflight (key, cb) { - if (reqs[key]) { - reqs[key].push(cb) - return null - } else { - reqs[key] = [cb] - return makeres(key) - } -} - -function makeres (key) { - return once(function RES () { - var cbs = reqs[key] - var len = cbs.length - var args = slice(arguments) - - // XXX It's somewhat ambiguous whether a new callback added in this - // pass should be queued for later execution if something in the - // list of callbacks throws, or if it should just be discarded. - // However, it's such an edge case that it hardly matters, and either - // choice is likely as surprising as the other. - // As it happens, we do go ahead and schedule it for later execution. - try { - for (var i = 0; i < len; i++) { - cbs[i].apply(null, args) - } - } finally { - if (cbs.length > len) { - // added more in the interim. - // de-zalgo, just in case, but don't call again. - cbs.splice(0, len) - process.nextTick(function () { - RES.apply(null, args) - }) - } else { - delete reqs[key] - } - } - }) -} - -function slice (args) { - var length = args.length - var array = [] - - for (var i = 0; i < length; i++) array[i] = args[i] - return array -} - -}).call(this,require('_process')) -},{"_process":24,"once":21,"wrappy":29}],19:[function(require,module,exports){ -if (typeof Object.create === 'function') { - // implementation from standard node.js 'util' module - module.exports = function inherits(ctor, superCtor) { - ctor.super_ = superCtor - ctor.prototype = Object.create(superCtor.prototype, { - constructor: { - value: ctor, - enumerable: false, - writable: true, - configurable: true - } - }); - }; -} else { - // old school shim for old browsers - module.exports = function inherits(ctor, superCtor) { - ctor.super_ = superCtor - var TempCtor = function () {} - TempCtor.prototype = superCtor.prototype - ctor.prototype = new TempCtor() - ctor.prototype.constructor = ctor - } -} - -},{}],20:[function(require,module,exports){ -module.exports = minimatch -minimatch.Minimatch = Minimatch - -var path = { sep: '/' } -try { - path = require('path') -} catch (er) {} - -var GLOBSTAR = minimatch.GLOBSTAR = Minimatch.GLOBSTAR = {} -var expand = require('brace-expansion') - -var plTypes = { - '!': { open: '(?:(?!(?:', close: '))[^/]*?)'}, - '?': { open: '(?:', close: ')?' }, - '+': { open: '(?:', close: ')+' }, - '*': { open: '(?:', close: ')*' }, - '@': { open: '(?:', close: ')' } -} - -// any single thing other than / -// don't need to escape / when using new RegExp() -var qmark = '[^/]' - -// * => any number of characters -var star = qmark + '*?' - -// ** when dots are allowed. Anything goes, except .. and . -// not (^ or / followed by one or two dots followed by $ or /), -// followed by anything, any number of times. -var twoStarDot = '(?:(?!(?:\\\/|^)(?:\\.{1,2})($|\\\/)).)*?' - -// not a ^ or / followed by a dot, -// followed by anything, any number of times. -var twoStarNoDot = '(?:(?!(?:\\\/|^)\\.).)*?' - -// characters that need to be escaped in RegExp. -var reSpecials = charSet('().*{}+?[]^$\\!') - -// "abc" -> { a:true, b:true, c:true } -function charSet (s) { - return s.split('').reduce(function (set, c) { - set[c] = true - return set - }, {}) -} - -// normalizes slashes. -var slashSplit = /\/+/ - -minimatch.filter = filter -function filter (pattern, options) { - options = options || {} - return function (p, i, list) { - return minimatch(p, pattern, options) - } -} - -function ext (a, b) { - a = a || {} - b = b || {} - var t = {} - Object.keys(b).forEach(function (k) { - t[k] = b[k] - }) - Object.keys(a).forEach(function (k) { - t[k] = a[k] - }) - return t -} - -minimatch.defaults = function (def) { - if (!def || !Object.keys(def).length) return minimatch - - var orig = minimatch - - var m = function minimatch (p, pattern, options) { - return orig.minimatch(p, pattern, ext(def, options)) - } - - m.Minimatch = function Minimatch (pattern, options) { - return new orig.Minimatch(pattern, ext(def, options)) - } - - return m -} - -Minimatch.defaults = function (def) { - if (!def || !Object.keys(def).length) return Minimatch - return minimatch.defaults(def).Minimatch -} - -function minimatch (p, pattern, options) { - if (typeof pattern !== 'string') { - throw new TypeError('glob pattern string required') - } - - if (!options) options = {} - - // shortcut: comments match nothing. - if (!options.nocomment && pattern.charAt(0) === '#') { - return false - } - - // "" only matches "" - if (pattern.trim() === '') return p === '' - - return new Minimatch(pattern, options).match(p) -} - -function Minimatch (pattern, options) { - if (!(this instanceof Minimatch)) { - return new Minimatch(pattern, options) - } - - if (typeof pattern !== 'string') { - throw new TypeError('glob pattern string required') - } - - if (!options) options = {} - pattern = pattern.trim() - - // windows support: need to use /, not \ - if (path.sep !== '/') { - pattern = pattern.split(path.sep).join('/') - } - - this.options = options - this.set = [] - this.pattern = pattern - this.regexp = null - this.negate = false - this.comment = false - this.empty = false - - // make the set of regexps etc. - this.make() -} - -Minimatch.prototype.debug = function () {} - -Minimatch.prototype.make = make -function make () { - // don't do it more than once. - if (this._made) return - - var pattern = this.pattern - var options = this.options - - // empty patterns and comments match nothing. - if (!options.nocomment && pattern.charAt(0) === '#') { - this.comment = true - return - } - if (!pattern) { - this.empty = true - return - } - - // step 1: figure out negation, etc. - this.parseNegate() - - // step 2: expand braces - var set = this.globSet = this.braceExpand() - - if (options.debug) this.debug = console.error - - this.debug(this.pattern, set) - - // step 3: now we have a set, so turn each one into a series of path-portion - // matching patterns. - // These will be regexps, except in the case of "**", which is - // set to the GLOBSTAR object for globstar behavior, - // and will not contain any / characters - set = this.globParts = set.map(function (s) { - return s.split(slashSplit) - }) - - this.debug(this.pattern, set) - - // glob --> regexps - set = set.map(function (s, si, set) { - return s.map(this.parse, this) - }, this) - - this.debug(this.pattern, set) - - // filter out everything that didn't compile properly. - set = set.filter(function (s) { - return s.indexOf(false) === -1 - }) - - this.debug(this.pattern, set) - - this.set = set -} - -Minimatch.prototype.parseNegate = parseNegate -function parseNegate () { - var pattern = this.pattern - var negate = false - var options = this.options - var negateOffset = 0 - - if (options.nonegate) return - - for (var i = 0, l = pattern.length - ; i < l && pattern.charAt(i) === '!' - ; i++) { - negate = !negate - negateOffset++ - } - - if (negateOffset) this.pattern = pattern.substr(negateOffset) - this.negate = negate -} - -// Brace expansion: -// a{b,c}d -> abd acd -// a{b,}c -> abc ac -// a{0..3}d -> a0d a1d a2d a3d -// a{b,c{d,e}f}g -> abg acdfg acefg -// a{b,c}d{e,f}g -> abdeg acdeg abdeg abdfg -// -// Invalid sets are not expanded. -// a{2..}b -> a{2..}b -// a{b}c -> a{b}c -minimatch.braceExpand = function (pattern, options) { - return braceExpand(pattern, options) -} - -Minimatch.prototype.braceExpand = braceExpand - -function braceExpand (pattern, options) { - if (!options) { - if (this instanceof Minimatch) { - options = this.options - } else { - options = {} - } - } - - pattern = typeof pattern === 'undefined' - ? this.pattern : pattern - - if (typeof pattern === 'undefined') { - throw new TypeError('undefined pattern') - } - - if (options.nobrace || - !pattern.match(/\{.*\}/)) { - // shortcut. no need to expand. - return [pattern] - } - - return expand(pattern) -} - -// parse a component of the expanded set. -// At this point, no pattern may contain "/" in it -// so we're going to return a 2d array, where each entry is the full -// pattern, split on '/', and then turned into a regular expression. -// A regexp is made at the end which joins each array with an -// escaped /, and another full one which joins each regexp with |. -// -// Following the lead of Bash 4.1, note that "**" only has special meaning -// when it is the *only* thing in a path portion. Otherwise, any series -// of * is equivalent to a single *. Globstar behavior is enabled by -// default, and can be disabled by setting options.noglobstar. -Minimatch.prototype.parse = parse -var SUBPARSE = {} -function parse (pattern, isSub) { - if (pattern.length > 1024 * 64) { - throw new TypeError('pattern is too long') - } - - var options = this.options - - // shortcuts - if (!options.noglobstar && pattern === '**') return GLOBSTAR - if (pattern === '') return '' - - var re = '' - var hasMagic = !!options.nocase - var escaping = false - // ? => one single character - var patternListStack = [] - var negativeLists = [] - var stateChar - var inClass = false - var reClassStart = -1 - var classStart = -1 - // . and .. never match anything that doesn't start with ., - // even when options.dot is set. - var patternStart = pattern.charAt(0) === '.' ? '' // anything - // not (start or / followed by . or .. followed by / or end) - : options.dot ? '(?!(?:^|\\\/)\\.{1,2}(?:$|\\\/))' - : '(?!\\.)' - var self = this - - function clearStateChar () { - if (stateChar) { - // we had some state-tracking character - // that wasn't consumed by this pass. - switch (stateChar) { - case '*': - re += star - hasMagic = true - break - case '?': - re += qmark - hasMagic = true - break - default: - re += '\\' + stateChar - break - } - self.debug('clearStateChar %j %j', stateChar, re) - stateChar = false - } - } - - for (var i = 0, len = pattern.length, c - ; (i < len) && (c = pattern.charAt(i)) - ; i++) { - this.debug('%s\t%s %s %j', pattern, i, re, c) - - // skip over any that are escaped. - if (escaping && reSpecials[c]) { - re += '\\' + c - escaping = false - continue - } - - switch (c) { - case '/': - // completely not allowed, even escaped. - // Should already be path-split by now. - return false - - case '\\': - clearStateChar() - escaping = true - continue - - // the various stateChar values - // for the "extglob" stuff. - case '?': - case '*': - case '+': - case '@': - case '!': - this.debug('%s\t%s %s %j <-- stateChar', pattern, i, re, c) - - // all of those are literals inside a class, except that - // the glob [!a] means [^a] in regexp - if (inClass) { - this.debug(' in class') - if (c === '!' && i === classStart + 1) c = '^' - re += c - continue - } - - // if we already have a stateChar, then it means - // that there was something like ** or +? in there. - // Handle the stateChar, then proceed with this one. - self.debug('call clearStateChar %j', stateChar) - clearStateChar() - stateChar = c - // if extglob is disabled, then +(asdf|foo) isn't a thing. - // just clear the statechar *now*, rather than even diving into - // the patternList stuff. - if (options.noext) clearStateChar() - continue - - case '(': - if (inClass) { - re += '(' - continue - } - - if (!stateChar) { - re += '\\(' - continue - } - - patternListStack.push({ - type: stateChar, - start: i - 1, - reStart: re.length, - open: plTypes[stateChar].open, - close: plTypes[stateChar].close - }) - // negation is (?:(?!js)[^/]*) - re += stateChar === '!' ? '(?:(?!(?:' : '(?:' - this.debug('plType %j %j', stateChar, re) - stateChar = false - continue - - case ')': - if (inClass || !patternListStack.length) { - re += '\\)' - continue - } - - clearStateChar() - hasMagic = true - var pl = patternListStack.pop() - // negation is (?:(?!js)[^/]*) - // The others are (?:) - re += pl.close - if (pl.type === '!') { - negativeLists.push(pl) - } - pl.reEnd = re.length - continue - - case '|': - if (inClass || !patternListStack.length || escaping) { - re += '\\|' - escaping = false - continue - } - - clearStateChar() - re += '|' - continue - - // these are mostly the same in regexp and glob - case '[': - // swallow any state-tracking char before the [ - clearStateChar() - - if (inClass) { - re += '\\' + c - continue - } - - inClass = true - classStart = i - reClassStart = re.length - re += c - continue - - case ']': - // a right bracket shall lose its special - // meaning and represent itself in - // a bracket expression if it occurs - // first in the list. -- POSIX.2 2.8.3.2 - if (i === classStart + 1 || !inClass) { - re += '\\' + c - escaping = false - continue - } - - // handle the case where we left a class open. - // "[z-a]" is valid, equivalent to "\[z-a\]" - if (inClass) { - // split where the last [ was, make sure we don't have - // an invalid re. if so, re-walk the contents of the - // would-be class to re-translate any characters that - // were passed through as-is - // TODO: It would probably be faster to determine this - // without a try/catch and a new RegExp, but it's tricky - // to do safely. For now, this is safe and works. - var cs = pattern.substring(classStart + 1, i) - try { - RegExp('[' + cs + ']') - } catch (er) { - // not a valid class! - var sp = this.parse(cs, SUBPARSE) - re = re.substr(0, reClassStart) + '\\[' + sp[0] + '\\]' - hasMagic = hasMagic || sp[1] - inClass = false - continue - } - } - - // finish up the class. - hasMagic = true - inClass = false - re += c - continue - - default: - // swallow any state char that wasn't consumed - clearStateChar() - - if (escaping) { - // no need - escaping = false - } else if (reSpecials[c] - && !(c === '^' && inClass)) { - re += '\\' - } - - re += c - - } // switch - } // for - - // handle the case where we left a class open. - // "[abc" is valid, equivalent to "\[abc" - if (inClass) { - // split where the last [ was, and escape it - // this is a huge pita. We now have to re-walk - // the contents of the would-be class to re-translate - // any characters that were passed through as-is - cs = pattern.substr(classStart + 1) - sp = this.parse(cs, SUBPARSE) - re = re.substr(0, reClassStart) + '\\[' + sp[0] - hasMagic = hasMagic || sp[1] - } - - // handle the case where we had a +( thing at the *end* - // of the pattern. - // each pattern list stack adds 3 chars, and we need to go through - // and escape any | chars that were passed through as-is for the regexp. - // Go through and escape them, taking care not to double-escape any - // | chars that were already escaped. - for (pl = patternListStack.pop(); pl; pl = patternListStack.pop()) { - var tail = re.slice(pl.reStart + pl.open.length) - this.debug('setting tail', re, pl) - // maybe some even number of \, then maybe 1 \, followed by a | - tail = tail.replace(/((?:\\{2}){0,64})(\\?)\|/g, function (_, $1, $2) { - if (!$2) { - // the | isn't already escaped, so escape it. - $2 = '\\' - } - - // need to escape all those slashes *again*, without escaping the - // one that we need for escaping the | character. As it works out, - // escaping an even number of slashes can be done by simply repeating - // it exactly after itself. That's why this trick works. - // - // I am sorry that you have to see this. - return $1 + $1 + $2 + '|' - }) - - this.debug('tail=%j\n %s', tail, tail, pl, re) - var t = pl.type === '*' ? star - : pl.type === '?' ? qmark - : '\\' + pl.type - - hasMagic = true - re = re.slice(0, pl.reStart) + t + '\\(' + tail - } - - // handle trailing things that only matter at the very end. - clearStateChar() - if (escaping) { - // trailing \\ - re += '\\\\' - } - - // only need to apply the nodot start if the re starts with - // something that could conceivably capture a dot - var addPatternStart = false - switch (re.charAt(0)) { - case '.': - case '[': - case '(': addPatternStart = true - } - - // Hack to work around lack of negative lookbehind in JS - // A pattern like: *.!(x).!(y|z) needs to ensure that a name - // like 'a.xyz.yz' doesn't match. So, the first negative - // lookahead, has to look ALL the way ahead, to the end of - // the pattern. - for (var n = negativeLists.length - 1; n > -1; n--) { - var nl = negativeLists[n] - - var nlBefore = re.slice(0, nl.reStart) - var nlFirst = re.slice(nl.reStart, nl.reEnd - 8) - var nlLast = re.slice(nl.reEnd - 8, nl.reEnd) - var nlAfter = re.slice(nl.reEnd) - - nlLast += nlAfter - - // Handle nested stuff like *(*.js|!(*.json)), where open parens - // mean that we should *not* include the ) in the bit that is considered - // "after" the negated section. - var openParensBefore = nlBefore.split('(').length - 1 - var cleanAfter = nlAfter - for (i = 0; i < openParensBefore; i++) { - cleanAfter = cleanAfter.replace(/\)[+*?]?/, '') - } - nlAfter = cleanAfter - - var dollar = '' - if (nlAfter === '' && isSub !== SUBPARSE) { - dollar = '$' - } - var newRe = nlBefore + nlFirst + nlAfter + dollar + nlLast - re = newRe - } - - // if the re is not "" at this point, then we need to make sure - // it doesn't match against an empty path part. - // Otherwise a/* will match a/, which it should not. - if (re !== '' && hasMagic) { - re = '(?=.)' + re - } - - if (addPatternStart) { - re = patternStart + re - } - - // parsing just a piece of a larger pattern. - if (isSub === SUBPARSE) { - return [re, hasMagic] - } - - // skip the regexp for non-magical patterns - // unescape anything in it, though, so that it'll be - // an exact match against a file etc. - if (!hasMagic) { - return globUnescape(pattern) - } - - var flags = options.nocase ? 'i' : '' - try { - var regExp = new RegExp('^' + re + '$', flags) - } catch (er) { - // If it was an invalid regular expression, then it can't match - // anything. This trick looks for a character after the end of - // the string, which is of course impossible, except in multi-line - // mode, but it's not a /m regex. - return new RegExp('$.') - } - - regExp._glob = pattern - regExp._src = re - - return regExp -} - -minimatch.makeRe = function (pattern, options) { - return new Minimatch(pattern, options || {}).makeRe() -} - -Minimatch.prototype.makeRe = makeRe -function makeRe () { - if (this.regexp || this.regexp === false) return this.regexp - - // at this point, this.set is a 2d array of partial - // pattern strings, or "**". - // - // It's better to use .match(). This function shouldn't - // be used, really, but it's pretty convenient sometimes, - // when you just want to work with a regex. - var set = this.set - - if (!set.length) { - this.regexp = false - return this.regexp - } - var options = this.options - - var twoStar = options.noglobstar ? star - : options.dot ? twoStarDot - : twoStarNoDot - var flags = options.nocase ? 'i' : '' - - var re = set.map(function (pattern) { - return pattern.map(function (p) { - return (p === GLOBSTAR) ? twoStar - : (typeof p === 'string') ? regExpEscape(p) - : p._src - }).join('\\\/') - }).join('|') - - // must match entire pattern - // ending in a * or ** will make it less strict. - re = '^(?:' + re + ')$' - - // can match anything, as long as it's not this. - if (this.negate) re = '^(?!' + re + ').*$' - - try { - this.regexp = new RegExp(re, flags) - } catch (ex) { - this.regexp = false - } - return this.regexp -} - -minimatch.match = function (list, pattern, options) { - options = options || {} - var mm = new Minimatch(pattern, options) - list = list.filter(function (f) { - return mm.match(f) - }) - if (mm.options.nonull && !list.length) { - list.push(pattern) - } - return list -} - -Minimatch.prototype.match = match -function match (f, partial) { - this.debug('match', f, this.pattern) - // short-circuit in the case of busted things. - // comments, etc. - if (this.comment) return false - if (this.empty) return f === '' - - if (f === '/' && partial) return true - - var options = this.options - - // windows: need to use /, not \ - if (path.sep !== '/') { - f = f.split(path.sep).join('/') - } - - // treat the test path as a set of pathparts. - f = f.split(slashSplit) - this.debug(this.pattern, 'split', f) - - // just ONE of the pattern sets in this.set needs to match - // in order for it to be valid. If negating, then just one - // match means that we have failed. - // Either way, return on the first hit. - - var set = this.set - this.debug(this.pattern, 'set', set) - - // Find the basename of the path by looking for the last non-empty segment - var filename - var i - for (i = f.length - 1; i >= 0; i--) { - filename = f[i] - if (filename) break - } - - for (i = 0; i < set.length; i++) { - var pattern = set[i] - var file = f - if (options.matchBase && pattern.length === 1) { - file = [filename] - } - var hit = this.matchOne(file, pattern, partial) - if (hit) { - if (options.flipNegate) return true - return !this.negate - } - } - - // didn't get any hits. this is success if it's a negative - // pattern, failure otherwise. - if (options.flipNegate) return false - return this.negate -} - -// set partial to true to test if, for example, -// "/a/b" matches the start of "/*/b/*/d" -// Partial means, if you run out of file before you run -// out of pattern, then that's fine, as long as all -// the parts match. -Minimatch.prototype.matchOne = function (file, pattern, partial) { - var options = this.options - - this.debug('matchOne', - { 'this': this, file: file, pattern: pattern }) - - this.debug('matchOne', file.length, pattern.length) - - for (var fi = 0, - pi = 0, - fl = file.length, - pl = pattern.length - ; (fi < fl) && (pi < pl) - ; fi++, pi++) { - this.debug('matchOne loop') - var p = pattern[pi] - var f = file[fi] - - this.debug(pattern, p, f) - - // should be impossible. - // some invalid regexp stuff in the set. - if (p === false) return false - - if (p === GLOBSTAR) { - this.debug('GLOBSTAR', [pattern, p, f]) - - // "**" - // a/**/b/**/c would match the following: - // a/b/x/y/z/c - // a/x/y/z/b/c - // a/b/x/b/x/c - // a/b/c - // To do this, take the rest of the pattern after - // the **, and see if it would match the file remainder. - // If so, return success. - // If not, the ** "swallows" a segment, and try again. - // This is recursively awful. - // - // a/**/b/**/c matching a/b/x/y/z/c - // - a matches a - // - doublestar - // - matchOne(b/x/y/z/c, b/**/c) - // - b matches b - // - doublestar - // - matchOne(x/y/z/c, c) -> no - // - matchOne(y/z/c, c) -> no - // - matchOne(z/c, c) -> no - // - matchOne(c, c) yes, hit - var fr = fi - var pr = pi + 1 - if (pr === pl) { - this.debug('** at the end') - // a ** at the end will just swallow the rest. - // We have found a match. - // however, it will not swallow /.x, unless - // options.dot is set. - // . and .. are *never* matched by **, for explosively - // exponential reasons. - for (; fi < fl; fi++) { - if (file[fi] === '.' || file[fi] === '..' || - (!options.dot && file[fi].charAt(0) === '.')) return false - } - return true - } - - // ok, let's see if we can swallow whatever we can. - while (fr < fl) { - var swallowee = file[fr] - - this.debug('\nglobstar while', file, fr, pattern, pr, swallowee) - - // XXX remove this slice. Just pass the start index. - if (this.matchOne(file.slice(fr), pattern.slice(pr), partial)) { - this.debug('globstar found match!', fr, fl, swallowee) - // found a match. - return true - } else { - // can't swallow "." or ".." ever. - // can only swallow ".foo" when explicitly asked. - if (swallowee === '.' || swallowee === '..' || - (!options.dot && swallowee.charAt(0) === '.')) { - this.debug('dot detected!', file, fr, pattern, pr) - break - } - - // ** swallows a segment, and continue. - this.debug('globstar swallow a segment, and continue') - fr++ - } - } - - // no match was found. - // However, in partial mode, we can't say this is necessarily over. - // If there's more *pattern* left, then - if (partial) { - // ran out of file - this.debug('\n>>> no match, partial?', file, fr, pattern, pr) - if (fr === fl) return true - } - return false - } - - // something other than ** - // non-magic patterns just have to match exactly - // patterns with magic have been turned into regexps. - var hit - if (typeof p === 'string') { - if (options.nocase) { - hit = f.toLowerCase() === p.toLowerCase() - } else { - hit = f === p - } - this.debug('string match', p, f, hit) - } else { - hit = f.match(p) - this.debug('pattern match', p, f, hit) - } - - if (!hit) return false - } - - // Note: ending in / means that we'll get a final "" - // at the end of the pattern. This can only match a - // corresponding "" at the end of the file. - // If the file ends in /, then it can only match a - // a pattern that ends in /, unless the pattern just - // doesn't have any more for it. But, a/b/ should *not* - // match "a/b/*", even though "" matches against the - // [^/]*? pattern, except in partial mode, where it might - // simply not be reached yet. - // However, a/b/ should still satisfy a/* - - // now either we fell off the end of the pattern, or we're done. - if (fi === fl && pi === pl) { - // ran out of pattern and filename at the same time. - // an exact hit! - return true - } else if (fi === fl) { - // ran out of file, but still had pattern left. - // this is ok if we're doing the match as part of - // a glob fs traversal. - return partial - } else if (pi === pl) { - // ran out of pattern, still have file left. - // this is only acceptable if we're on the very last - // empty segment of a file with a trailing slash. - // a/* should match a/b/ - var emptyFileEnd = (fi === fl - 1) && (file[fi] === '') - return emptyFileEnd - } - - // should be unreachable. - throw new Error('wtf?') -} - -// replace stuff like \* with * -function globUnescape (s) { - return s.replace(/\\(.)/g, '$1') -} - -function regExpEscape (s) { - return s.replace(/[-[\]{}()*+?.,\\^$|#\s]/g, '\\$&') -} - -},{"brace-expansion":11,"path":22}],21:[function(require,module,exports){ -var wrappy = require('wrappy') -module.exports = wrappy(once) -module.exports.strict = wrappy(onceStrict) - -once.proto = once(function () { - Object.defineProperty(Function.prototype, 'once', { - value: function () { - return once(this) - }, - configurable: true - }) - - Object.defineProperty(Function.prototype, 'onceStrict', { - value: function () { - return onceStrict(this) - }, - configurable: true - }) -}) - -function once (fn) { - var f = function () { - if (f.called) return f.value - f.called = true - return f.value = fn.apply(this, arguments) - } - f.called = false - return f -} - -function onceStrict (fn) { - var f = function () { - if (f.called) - throw new Error(f.onceError) - f.called = true - return f.value = fn.apply(this, arguments) - } - var name = fn.name || 'Function wrapped with `once`' - f.onceError = name + " shouldn't be called more than once" - f.called = false - return f -} - -},{"wrappy":29}],22:[function(require,module,exports){ -(function (process){ -// Copyright Joyent, Inc. and other Node contributors. -// -// Permission is hereby granted, free of charge, to any person obtaining a -// copy of this software and associated documentation files (the -// "Software"), to deal in the Software without restriction, including -// without limitation the rights to use, copy, modify, merge, publish, -// distribute, sublicense, and/or sell copies of the Software, and to permit -// persons to whom the Software is furnished to do so, subject to the -// following conditions: -// -// The above copyright notice and this permission notice shall be included -// in all copies or substantial portions of the Software. -// -// THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS -// OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF -// MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN -// NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, -// DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR -// OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE -// USE OR OTHER DEALINGS IN THE SOFTWARE. - -// resolves . and .. elements in a path array with directory names there -// must be no slashes, empty elements, or device names (c:\) in the array -// (so also no leading and trailing slashes - it does not distinguish -// relative and absolute paths) -function normalizeArray(parts, allowAboveRoot) { - // if the path tries to go above the root, `up` ends up > 0 - var up = 0; - for (var i = parts.length - 1; i >= 0; i--) { - var last = parts[i]; - if (last === '.') { - parts.splice(i, 1); - } else if (last === '..') { - parts.splice(i, 1); - up++; - } else if (up) { - parts.splice(i, 1); - up--; - } - } - - // if the path is allowed to go above the root, restore leading ..s - if (allowAboveRoot) { - for (; up--; up) { - parts.unshift('..'); - } - } - - return parts; -} - -// Split a filename into [root, dir, basename, ext], unix version -// 'root' is just a slash, or nothing. -var splitPathRe = - /^(\/?|)([\s\S]*?)((?:\.{1,2}|[^\/]+?|)(\.[^.\/]*|))(?:[\/]*)$/; -var splitPath = function(filename) { - return splitPathRe.exec(filename).slice(1); -}; - -// path.resolve([from ...], to) -// posix version -exports.resolve = function() { - var resolvedPath = '', - resolvedAbsolute = false; - - for (var i = arguments.length - 1; i >= -1 && !resolvedAbsolute; i--) { - var path = (i >= 0) ? arguments[i] : process.cwd(); - - // Skip empty and invalid entries - if (typeof path !== 'string') { - throw new TypeError('Arguments to path.resolve must be strings'); - } else if (!path) { - continue; - } - - resolvedPath = path + '/' + resolvedPath; - resolvedAbsolute = path.charAt(0) === '/'; - } - - // At this point the path should be resolved to a full absolute path, but - // handle relative paths to be safe (might happen when process.cwd() fails) - - // Normalize the path - resolvedPath = normalizeArray(filter(resolvedPath.split('/'), function(p) { - return !!p; - }), !resolvedAbsolute).join('/'); - - return ((resolvedAbsolute ? '/' : '') + resolvedPath) || '.'; -}; - -// path.normalize(path) -// posix version -exports.normalize = function(path) { - var isAbsolute = exports.isAbsolute(path), - trailingSlash = substr(path, -1) === '/'; - - // Normalize the path - path = normalizeArray(filter(path.split('/'), function(p) { - return !!p; - }), !isAbsolute).join('/'); - - if (!path && !isAbsolute) { - path = '.'; - } - if (path && trailingSlash) { - path += '/'; - } - - return (isAbsolute ? '/' : '') + path; -}; - -// posix version -exports.isAbsolute = function(path) { - return path.charAt(0) === '/'; -}; - -// posix version -exports.join = function() { - var paths = Array.prototype.slice.call(arguments, 0); - return exports.normalize(filter(paths, function(p, index) { - if (typeof p !== 'string') { - throw new TypeError('Arguments to path.join must be strings'); - } - return p; - }).join('/')); -}; - - -// path.relative(from, to) -// posix version -exports.relative = function(from, to) { - from = exports.resolve(from).substr(1); - to = exports.resolve(to).substr(1); - - function trim(arr) { - var start = 0; - for (; start < arr.length; start++) { - if (arr[start] !== '') break; - } - - var end = arr.length - 1; - for (; end >= 0; end--) { - if (arr[end] !== '') break; - } - - if (start > end) return []; - return arr.slice(start, end - start + 1); - } - - var fromParts = trim(from.split('/')); - var toParts = trim(to.split('/')); - - var length = Math.min(fromParts.length, toParts.length); - var samePartsLength = length; - for (var i = 0; i < length; i++) { - if (fromParts[i] !== toParts[i]) { - samePartsLength = i; - break; - } - } - - var outputParts = []; - for (var i = samePartsLength; i < fromParts.length; i++) { - outputParts.push('..'); - } - - outputParts = outputParts.concat(toParts.slice(samePartsLength)); - - return outputParts.join('/'); -}; - -exports.sep = '/'; -exports.delimiter = ':'; - -exports.dirname = function(path) { - var result = splitPath(path), - root = result[0], - dir = result[1]; - - if (!root && !dir) { - // No dirname whatsoever - return '.'; - } - - if (dir) { - // It has a dirname, strip trailing slash - dir = dir.substr(0, dir.length - 1); - } - - return root + dir; -}; - - -exports.basename = function(path, ext) { - var f = splitPath(path)[2]; - // TODO: make this comparison case-insensitive on windows? - if (ext && f.substr(-1 * ext.length) === ext) { - f = f.substr(0, f.length - ext.length); - } - return f; -}; - - -exports.extname = function(path) { - return splitPath(path)[3]; -}; - -function filter (xs, f) { - if (xs.filter) return xs.filter(f); - var res = []; - for (var i = 0; i < xs.length; i++) { - if (f(xs[i], i, xs)) res.push(xs[i]); - } - return res; -} - -// String.prototype.substr - negative index don't work in IE8 -var substr = 'ab'.substr(-1) === 'b' - ? function (str, start, len) { return str.substr(start, len) } - : function (str, start, len) { - if (start < 0) start = str.length + start; - return str.substr(start, len); - } -; - -}).call(this,require('_process')) -},{"_process":24}],23:[function(require,module,exports){ -(function (process){ -'use strict'; - -function posix(path) { - return path.charAt(0) === '/'; -} - -function win32(path) { - // https://github.com/nodejs/node/blob/b3fcc245fb25539909ef1d5eaa01dbf92e168633/lib/path.js#L56 - var splitDeviceRe = /^([a-zA-Z]:|[\\\/]{2}[^\\\/]+[\\\/]+[^\\\/]+)?([\\\/])?([\s\S]*?)$/; - var result = splitDeviceRe.exec(path); - var device = result[1] || ''; - var isUnc = Boolean(device && device.charAt(1) !== ':'); - - // UNC paths are always absolute - return Boolean(result[2] || isUnc); -} - -module.exports = process.platform === 'win32' ? win32 : posix; -module.exports.posix = posix; -module.exports.win32 = win32; - -}).call(this,require('_process')) -},{"_process":24}],24:[function(require,module,exports){ -// shim for using process in browser -var process = module.exports = {}; - -// cached from whatever global is present so that test runners that stub it -// don't break things. But we need to wrap it in a try catch in case it is -// wrapped in strict mode code which doesn't define any globals. It's inside a -// function because try/catches deoptimize in certain engines. - -var cachedSetTimeout; -var cachedClearTimeout; - -function defaultSetTimout() { - throw new Error('setTimeout has not been defined'); -} -function defaultClearTimeout () { - throw new Error('clearTimeout has not been defined'); -} -(function () { - try { - if (typeof setTimeout === 'function') { - cachedSetTimeout = setTimeout; - } else { - cachedSetTimeout = defaultSetTimout; - } - } catch (e) { - cachedSetTimeout = defaultSetTimout; - } - try { - if (typeof clearTimeout === 'function') { - cachedClearTimeout = clearTimeout; - } else { - cachedClearTimeout = defaultClearTimeout; - } - } catch (e) { - cachedClearTimeout = defaultClearTimeout; - } -} ()) -function runTimeout(fun) { - if (cachedSetTimeout === setTimeout) { - //normal enviroments in sane situations - return setTimeout(fun, 0); - } - // if setTimeout wasn't available but was latter defined - if ((cachedSetTimeout === defaultSetTimout || !cachedSetTimeout) && setTimeout) { - cachedSetTimeout = setTimeout; - return setTimeout(fun, 0); - } - try { - // when when somebody has screwed with setTimeout but no I.E. maddness - return cachedSetTimeout(fun, 0); - } catch(e){ - try { - // When we are in I.E. but the script has been evaled so I.E. doesn't trust the global object when called normally - return cachedSetTimeout.call(null, fun, 0); - } catch(e){ - // same as above but when it's a version of I.E. that must have the global object for 'this', hopfully our context correct otherwise it will throw a global error - return cachedSetTimeout.call(this, fun, 0); - } - } - - -} -function runClearTimeout(marker) { - if (cachedClearTimeout === clearTimeout) { - //normal enviroments in sane situations - return clearTimeout(marker); - } - // if clearTimeout wasn't available but was latter defined - if ((cachedClearTimeout === defaultClearTimeout || !cachedClearTimeout) && clearTimeout) { - cachedClearTimeout = clearTimeout; - return clearTimeout(marker); - } - try { - // when when somebody has screwed with setTimeout but no I.E. maddness - return cachedClearTimeout(marker); - } catch (e){ - try { - // When we are in I.E. but the script has been evaled so I.E. doesn't trust the global object when called normally - return cachedClearTimeout.call(null, marker); - } catch (e){ - // same as above but when it's a version of I.E. that must have the global object for 'this', hopfully our context correct otherwise it will throw a global error. - // Some versions of I.E. have different rules for clearTimeout vs setTimeout - return cachedClearTimeout.call(this, marker); - } - } - - - -} -var queue = []; -var draining = false; -var currentQueue; -var queueIndex = -1; - -function cleanUpNextTick() { - if (!draining || !currentQueue) { - return; - } - draining = false; - if (currentQueue.length) { - queue = currentQueue.concat(queue); - } else { - queueIndex = -1; - } - if (queue.length) { - drainQueue(); - } -} - -function drainQueue() { - if (draining) { - return; - } - var timeout = runTimeout(cleanUpNextTick); - draining = true; - - var len = queue.length; - while(len) { - currentQueue = queue; - queue = []; - while (++queueIndex < len) { - if (currentQueue) { - currentQueue[queueIndex].run(); - } - } - queueIndex = -1; - len = queue.length; - } - currentQueue = null; - draining = false; - runClearTimeout(timeout); -} - -process.nextTick = function (fun) { - var args = new Array(arguments.length - 1); - if (arguments.length > 1) { - for (var i = 1; i < arguments.length; i++) { - args[i - 1] = arguments[i]; - } - } - queue.push(new Item(fun, args)); - if (queue.length === 1 && !draining) { - runTimeout(drainQueue); - } -}; - -// v8 likes predictible objects -function Item(fun, array) { - this.fun = fun; - this.array = array; -} -Item.prototype.run = function () { - this.fun.apply(null, this.array); -}; -process.title = 'browser'; -process.browser = true; -process.env = {}; -process.argv = []; -process.version = ''; // empty string to avoid regexp issues -process.versions = {}; - -function noop() {} - -process.on = noop; -process.addListener = noop; -process.once = noop; -process.off = noop; -process.removeListener = noop; -process.removeAllListeners = noop; -process.emit = noop; -process.prependListener = noop; -process.prependOnceListener = noop; - -process.listeners = function (name) { return [] } - -process.binding = function (name) { - throw new Error('process.binding is not supported'); -}; - -process.cwd = function () { return '/' }; -process.chdir = function (dir) { - throw new Error('process.chdir is not supported'); -}; -process.umask = function() { return 0; }; - -},{}],25:[function(require,module,exports){ -// Underscore.js 1.8.3 -// http://underscorejs.org -// (c) 2009-2015 Jeremy Ashkenas, DocumentCloud and Investigative Reporters & Editors -// Underscore may be freely distributed under the MIT license. - -(function() { - - // Baseline setup - // -------------- - - // Establish the root object, `window` in the browser, or `exports` on the server. - var root = this; - - // Save the previous value of the `_` variable. - var previousUnderscore = root._; - - // Save bytes in the minified (but not gzipped) version: - var ArrayProto = Array.prototype, ObjProto = Object.prototype, FuncProto = Function.prototype; - - // Create quick reference variables for speed access to core prototypes. - var - push = ArrayProto.push, - slice = ArrayProto.slice, - toString = ObjProto.toString, - hasOwnProperty = ObjProto.hasOwnProperty; - - // All **ECMAScript 5** native function implementations that we hope to use - // are declared here. - var - nativeIsArray = Array.isArray, - nativeKeys = Object.keys, - nativeBind = FuncProto.bind, - nativeCreate = Object.create; - - // Naked function reference for surrogate-prototype-swapping. - var Ctor = function(){}; - - // Create a safe reference to the Underscore object for use below. - var _ = function(obj) { - if (obj instanceof _) return obj; - if (!(this instanceof _)) return new _(obj); - this._wrapped = obj; - }; - - // Export the Underscore object for **Node.js**, with - // backwards-compatibility for the old `require()` API. If we're in - // the browser, add `_` as a global object. - if (typeof exports !== 'undefined') { - if (typeof module !== 'undefined' && module.exports) { - exports = module.exports = _; - } - exports._ = _; - } else { - root._ = _; - } - - // Current version. - _.VERSION = '1.8.3'; - - // Internal function that returns an efficient (for current engines) version - // of the passed-in callback, to be repeatedly applied in other Underscore - // functions. - var optimizeCb = function(func, context, argCount) { - if (context === void 0) return func; - switch (argCount == null ? 3 : argCount) { - case 1: return function(value) { - return func.call(context, value); - }; - case 2: return function(value, other) { - return func.call(context, value, other); - }; - case 3: return function(value, index, collection) { - return func.call(context, value, index, collection); - }; - case 4: return function(accumulator, value, index, collection) { - return func.call(context, accumulator, value, index, collection); - }; - } - return function() { - return func.apply(context, arguments); - }; - }; - - // A mostly-internal function to generate callbacks that can be applied - // to each element in a collection, returning the desired result — either - // identity, an arbitrary callback, a property matcher, or a property accessor. - var cb = function(value, context, argCount) { - if (value == null) return _.identity; - if (_.isFunction(value)) return optimizeCb(value, context, argCount); - if (_.isObject(value)) return _.matcher(value); - return _.property(value); - }; - _.iteratee = function(value, context) { - return cb(value, context, Infinity); - }; - - // An internal function for creating assigner functions. - var createAssigner = function(keysFunc, undefinedOnly) { - return function(obj) { - var length = arguments.length; - if (length < 2 || obj == null) return obj; - for (var index = 1; index < length; index++) { - var source = arguments[index], - keys = keysFunc(source), - l = keys.length; - for (var i = 0; i < l; i++) { - var key = keys[i]; - if (!undefinedOnly || obj[key] === void 0) obj[key] = source[key]; - } - } - return obj; - }; - }; - - // An internal function for creating a new object that inherits from another. - var baseCreate = function(prototype) { - if (!_.isObject(prototype)) return {}; - if (nativeCreate) return nativeCreate(prototype); - Ctor.prototype = prototype; - var result = new Ctor; - Ctor.prototype = null; - return result; - }; - - var property = function(key) { - return function(obj) { - return obj == null ? void 0 : obj[key]; - }; - }; - - // Helper for collection methods to determine whether a collection - // should be iterated as an array or as an object - // Related: http://people.mozilla.org/~jorendorff/es6-draft.html#sec-tolength - // Avoids a very nasty iOS 8 JIT bug on ARM-64. #2094 - var MAX_ARRAY_INDEX = Math.pow(2, 53) - 1; - var getLength = property('length'); - var isArrayLike = function(collection) { - var length = getLength(collection); - return typeof length == 'number' && length >= 0 && length <= MAX_ARRAY_INDEX; - }; - - // Collection Functions - // -------------------- - - // The cornerstone, an `each` implementation, aka `forEach`. - // Handles raw objects in addition to array-likes. Treats all - // sparse array-likes as if they were dense. - _.each = _.forEach = function(obj, iteratee, context) { - iteratee = optimizeCb(iteratee, context); - var i, length; - if (isArrayLike(obj)) { - for (i = 0, length = obj.length; i < length; i++) { - iteratee(obj[i], i, obj); - } - } else { - var keys = _.keys(obj); - for (i = 0, length = keys.length; i < length; i++) { - iteratee(obj[keys[i]], keys[i], obj); - } - } - return obj; - }; - - // Return the results of applying the iteratee to each element. - _.map = _.collect = function(obj, iteratee, context) { - iteratee = cb(iteratee, context); - var keys = !isArrayLike(obj) && _.keys(obj), - length = (keys || obj).length, - results = Array(length); - for (var index = 0; index < length; index++) { - var currentKey = keys ? keys[index] : index; - results[index] = iteratee(obj[currentKey], currentKey, obj); - } - return results; - }; - - // Create a reducing function iterating left or right. - function createReduce(dir) { - // Optimized iterator function as using arguments.length - // in the main function will deoptimize the, see #1991. - function iterator(obj, iteratee, memo, keys, index, length) { - for (; index >= 0 && index < length; index += dir) { - var currentKey = keys ? keys[index] : index; - memo = iteratee(memo, obj[currentKey], currentKey, obj); - } - return memo; - } - - return function(obj, iteratee, memo, context) { - iteratee = optimizeCb(iteratee, context, 4); - var keys = !isArrayLike(obj) && _.keys(obj), - length = (keys || obj).length, - index = dir > 0 ? 0 : length - 1; - // Determine the initial value if none is provided. - if (arguments.length < 3) { - memo = obj[keys ? keys[index] : index]; - index += dir; - } - return iterator(obj, iteratee, memo, keys, index, length); - }; - } - - // **Reduce** builds up a single result from a list of values, aka `inject`, - // or `foldl`. - _.reduce = _.foldl = _.inject = createReduce(1); - - // The right-associative version of reduce, also known as `foldr`. - _.reduceRight = _.foldr = createReduce(-1); - - // Return the first value which passes a truth test. Aliased as `detect`. - _.find = _.detect = function(obj, predicate, context) { - var key; - if (isArrayLike(obj)) { - key = _.findIndex(obj, predicate, context); - } else { - key = _.findKey(obj, predicate, context); - } - if (key !== void 0 && key !== -1) return obj[key]; - }; - - // Return all the elements that pass a truth test. - // Aliased as `select`. - _.filter = _.select = function(obj, predicate, context) { - var results = []; - predicate = cb(predicate, context); - _.each(obj, function(value, index, list) { - if (predicate(value, index, list)) results.push(value); - }); - return results; - }; - - // Return all the elements for which a truth test fails. - _.reject = function(obj, predicate, context) { - return _.filter(obj, _.negate(cb(predicate)), context); - }; - - // Determine whether all of the elements match a truth test. - // Aliased as `all`. - _.every = _.all = function(obj, predicate, context) { - predicate = cb(predicate, context); - var keys = !isArrayLike(obj) && _.keys(obj), - length = (keys || obj).length; - for (var index = 0; index < length; index++) { - var currentKey = keys ? keys[index] : index; - if (!predicate(obj[currentKey], currentKey, obj)) return false; - } - return true; - }; - - // Determine if at least one element in the object matches a truth test. - // Aliased as `any`. - _.some = _.any = function(obj, predicate, context) { - predicate = cb(predicate, context); - var keys = !isArrayLike(obj) && _.keys(obj), - length = (keys || obj).length; - for (var index = 0; index < length; index++) { - var currentKey = keys ? keys[index] : index; - if (predicate(obj[currentKey], currentKey, obj)) return true; - } - return false; - }; - - // Determine if the array or object contains a given item (using `===`). - // Aliased as `includes` and `include`. - _.contains = _.includes = _.include = function(obj, item, fromIndex, guard) { - if (!isArrayLike(obj)) obj = _.values(obj); - if (typeof fromIndex != 'number' || guard) fromIndex = 0; - return _.indexOf(obj, item, fromIndex) >= 0; - }; - - // Invoke a method (with arguments) on every item in a collection. - _.invoke = function(obj, method) { - var args = slice.call(arguments, 2); - var isFunc = _.isFunction(method); - return _.map(obj, function(value) { - var func = isFunc ? method : value[method]; - return func == null ? func : func.apply(value, args); - }); - }; - - // Convenience version of a common use case of `map`: fetching a property. - _.pluck = function(obj, key) { - return _.map(obj, _.property(key)); - }; - - // Convenience version of a common use case of `filter`: selecting only objects - // containing specific `key:value` pairs. - _.where = function(obj, attrs) { - return _.filter(obj, _.matcher(attrs)); - }; - - // Convenience version of a common use case of `find`: getting the first object - // containing specific `key:value` pairs. - _.findWhere = function(obj, attrs) { - return _.find(obj, _.matcher(attrs)); - }; - - // Return the maximum element (or element-based computation). - _.max = function(obj, iteratee, context) { - var result = -Infinity, lastComputed = -Infinity, - value, computed; - if (iteratee == null && obj != null) { - obj = isArrayLike(obj) ? obj : _.values(obj); - for (var i = 0, length = obj.length; i < length; i++) { - value = obj[i]; - if (value > result) { - result = value; - } - } - } else { - iteratee = cb(iteratee, context); - _.each(obj, function(value, index, list) { - computed = iteratee(value, index, list); - if (computed > lastComputed || computed === -Infinity && result === -Infinity) { - result = value; - lastComputed = computed; - } - }); - } - return result; - }; - - // Return the minimum element (or element-based computation). - _.min = function(obj, iteratee, context) { - var result = Infinity, lastComputed = Infinity, - value, computed; - if (iteratee == null && obj != null) { - obj = isArrayLike(obj) ? obj : _.values(obj); - for (var i = 0, length = obj.length; i < length; i++) { - value = obj[i]; - if (value < result) { - result = value; - } - } - } else { - iteratee = cb(iteratee, context); - _.each(obj, function(value, index, list) { - computed = iteratee(value, index, list); - if (computed < lastComputed || computed === Infinity && result === Infinity) { - result = value; - lastComputed = computed; - } - }); - } - return result; - }; - - // Shuffle a collection, using the modern version of the - // [Fisher-Yates shuffle](http://en.wikipedia.org/wiki/Fisher–Yates_shuffle). - _.shuffle = function(obj) { - var set = isArrayLike(obj) ? obj : _.values(obj); - var length = set.length; - var shuffled = Array(length); - for (var index = 0, rand; index < length; index++) { - rand = _.random(0, index); - if (rand !== index) shuffled[index] = shuffled[rand]; - shuffled[rand] = set[index]; - } - return shuffled; - }; - - // Sample **n** random values from a collection. - // If **n** is not specified, returns a single random element. - // The internal `guard` argument allows it to work with `map`. - _.sample = function(obj, n, guard) { - if (n == null || guard) { - if (!isArrayLike(obj)) obj = _.values(obj); - return obj[_.random(obj.length - 1)]; - } - return _.shuffle(obj).slice(0, Math.max(0, n)); - }; - - // Sort the object's values by a criterion produced by an iteratee. - _.sortBy = function(obj, iteratee, context) { - iteratee = cb(iteratee, context); - return _.pluck(_.map(obj, function(value, index, list) { - return { - value: value, - index: index, - criteria: iteratee(value, index, list) - }; - }).sort(function(left, right) { - var a = left.criteria; - var b = right.criteria; - if (a !== b) { - if (a > b || a === void 0) return 1; - if (a < b || b === void 0) return -1; - } - return left.index - right.index; - }), 'value'); - }; - - // An internal function used for aggregate "group by" operations. - var group = function(behavior) { - return function(obj, iteratee, context) { - var result = {}; - iteratee = cb(iteratee, context); - _.each(obj, function(value, index) { - var key = iteratee(value, index, obj); - behavior(result, value, key); - }); - return result; - }; - }; - - // Groups the object's values by a criterion. Pass either a string attribute - // to group by, or a function that returns the criterion. - _.groupBy = group(function(result, value, key) { - if (_.has(result, key)) result[key].push(value); else result[key] = [value]; - }); - - // Indexes the object's values by a criterion, similar to `groupBy`, but for - // when you know that your index values will be unique. - _.indexBy = group(function(result, value, key) { - result[key] = value; - }); - - // Counts instances of an object that group by a certain criterion. Pass - // either a string attribute to count by, or a function that returns the - // criterion. - _.countBy = group(function(result, value, key) { - if (_.has(result, key)) result[key]++; else result[key] = 1; - }); - - // Safely create a real, live array from anything iterable. - _.toArray = function(obj) { - if (!obj) return []; - if (_.isArray(obj)) return slice.call(obj); - if (isArrayLike(obj)) return _.map(obj, _.identity); - return _.values(obj); - }; - - // Return the number of elements in an object. - _.size = function(obj) { - if (obj == null) return 0; - return isArrayLike(obj) ? obj.length : _.keys(obj).length; - }; - - // Split a collection into two arrays: one whose elements all satisfy the given - // predicate, and one whose elements all do not satisfy the predicate. - _.partition = function(obj, predicate, context) { - predicate = cb(predicate, context); - var pass = [], fail = []; - _.each(obj, function(value, key, obj) { - (predicate(value, key, obj) ? pass : fail).push(value); - }); - return [pass, fail]; - }; - - // Array Functions - // --------------- - - // Get the first element of an array. Passing **n** will return the first N - // values in the array. Aliased as `head` and `take`. The **guard** check - // allows it to work with `_.map`. - _.first = _.head = _.take = function(array, n, guard) { - if (array == null) return void 0; - if (n == null || guard) return array[0]; - return _.initial(array, array.length - n); - }; - - // Returns everything but the last entry of the array. Especially useful on - // the arguments object. Passing **n** will return all the values in - // the array, excluding the last N. - _.initial = function(array, n, guard) { - return slice.call(array, 0, Math.max(0, array.length - (n == null || guard ? 1 : n))); - }; - - // Get the last element of an array. Passing **n** will return the last N - // values in the array. - _.last = function(array, n, guard) { - if (array == null) return void 0; - if (n == null || guard) return array[array.length - 1]; - return _.rest(array, Math.max(0, array.length - n)); - }; - - // Returns everything but the first entry of the array. Aliased as `tail` and `drop`. - // Especially useful on the arguments object. Passing an **n** will return - // the rest N values in the array. - _.rest = _.tail = _.drop = function(array, n, guard) { - return slice.call(array, n == null || guard ? 1 : n); - }; - - // Trim out all falsy values from an array. - _.compact = function(array) { - return _.filter(array, _.identity); - }; - - // Internal implementation of a recursive `flatten` function. - var flatten = function(input, shallow, strict, startIndex) { - var output = [], idx = 0; - for (var i = startIndex || 0, length = getLength(input); i < length; i++) { - var value = input[i]; - if (isArrayLike(value) && (_.isArray(value) || _.isArguments(value))) { - //flatten current level of array or arguments object - if (!shallow) value = flatten(value, shallow, strict); - var j = 0, len = value.length; - output.length += len; - while (j < len) { - output[idx++] = value[j++]; - } - } else if (!strict) { - output[idx++] = value; - } - } - return output; - }; - - // Flatten out an array, either recursively (by default), or just one level. - _.flatten = function(array, shallow) { - return flatten(array, shallow, false); - }; - - // Return a version of the array that does not contain the specified value(s). - _.without = function(array) { - return _.difference(array, slice.call(arguments, 1)); - }; - - // Produce a duplicate-free version of the array. If the array has already - // been sorted, you have the option of using a faster algorithm. - // Aliased as `unique`. - _.uniq = _.unique = function(array, isSorted, iteratee, context) { - if (!_.isBoolean(isSorted)) { - context = iteratee; - iteratee = isSorted; - isSorted = false; - } - if (iteratee != null) iteratee = cb(iteratee, context); - var result = []; - var seen = []; - for (var i = 0, length = getLength(array); i < length; i++) { - var value = array[i], - computed = iteratee ? iteratee(value, i, array) : value; - if (isSorted) { - if (!i || seen !== computed) result.push(value); - seen = computed; - } else if (iteratee) { - if (!_.contains(seen, computed)) { - seen.push(computed); - result.push(value); - } - } else if (!_.contains(result, value)) { - result.push(value); - } - } - return result; - }; - - // Produce an array that contains the union: each distinct element from all of - // the passed-in arrays. - _.union = function() { - return _.uniq(flatten(arguments, true, true)); - }; - - // Produce an array that contains every item shared between all the - // passed-in arrays. - _.intersection = function(array) { - var result = []; - var argsLength = arguments.length; - for (var i = 0, length = getLength(array); i < length; i++) { - var item = array[i]; - if (_.contains(result, item)) continue; - for (var j = 1; j < argsLength; j++) { - if (!_.contains(arguments[j], item)) break; - } - if (j === argsLength) result.push(item); - } - return result; - }; - - // Take the difference between one array and a number of other arrays. - // Only the elements present in just the first array will remain. - _.difference = function(array) { - var rest = flatten(arguments, true, true, 1); - return _.filter(array, function(value){ - return !_.contains(rest, value); - }); - }; - - // Zip together multiple lists into a single array -- elements that share - // an index go together. - _.zip = function() { - return _.unzip(arguments); - }; - - // Complement of _.zip. Unzip accepts an array of arrays and groups - // each array's elements on shared indices - _.unzip = function(array) { - var length = array && _.max(array, getLength).length || 0; - var result = Array(length); - - for (var index = 0; index < length; index++) { - result[index] = _.pluck(array, index); - } - return result; - }; - - // Converts lists into objects. Pass either a single array of `[key, value]` - // pairs, or two parallel arrays of the same length -- one of keys, and one of - // the corresponding values. - _.object = function(list, values) { - var result = {}; - for (var i = 0, length = getLength(list); i < length; i++) { - if (values) { - result[list[i]] = values[i]; - } else { - result[list[i][0]] = list[i][1]; - } - } - return result; - }; - - // Generator function to create the findIndex and findLastIndex functions - function createPredicateIndexFinder(dir) { - return function(array, predicate, context) { - predicate = cb(predicate, context); - var length = getLength(array); - var index = dir > 0 ? 0 : length - 1; - for (; index >= 0 && index < length; index += dir) { - if (predicate(array[index], index, array)) return index; - } - return -1; - }; - } - - // Returns the first index on an array-like that passes a predicate test - _.findIndex = createPredicateIndexFinder(1); - _.findLastIndex = createPredicateIndexFinder(-1); - - // Use a comparator function to figure out the smallest index at which - // an object should be inserted so as to maintain order. Uses binary search. - _.sortedIndex = function(array, obj, iteratee, context) { - iteratee = cb(iteratee, context, 1); - var value = iteratee(obj); - var low = 0, high = getLength(array); - while (low < high) { - var mid = Math.floor((low + high) / 2); - if (iteratee(array[mid]) < value) low = mid + 1; else high = mid; - } - return low; - }; - - // Generator function to create the indexOf and lastIndexOf functions - function createIndexFinder(dir, predicateFind, sortedIndex) { - return function(array, item, idx) { - var i = 0, length = getLength(array); - if (typeof idx == 'number') { - if (dir > 0) { - i = idx >= 0 ? idx : Math.max(idx + length, i); - } else { - length = idx >= 0 ? Math.min(idx + 1, length) : idx + length + 1; - } - } else if (sortedIndex && idx && length) { - idx = sortedIndex(array, item); - return array[idx] === item ? idx : -1; - } - if (item !== item) { - idx = predicateFind(slice.call(array, i, length), _.isNaN); - return idx >= 0 ? idx + i : -1; - } - for (idx = dir > 0 ? i : length - 1; idx >= 0 && idx < length; idx += dir) { - if (array[idx] === item) return idx; - } - return -1; - }; - } - - // Return the position of the first occurrence of an item in an array, - // or -1 if the item is not included in the array. - // If the array is large and already in sort order, pass `true` - // for **isSorted** to use binary search. - _.indexOf = createIndexFinder(1, _.findIndex, _.sortedIndex); - _.lastIndexOf = createIndexFinder(-1, _.findLastIndex); - - // Generate an integer Array containing an arithmetic progression. A port of - // the native Python `range()` function. See - // [the Python documentation](http://docs.python.org/library/functions.html#range). - _.range = function(start, stop, step) { - if (stop == null) { - stop = start || 0; - start = 0; - } - step = step || 1; - - var length = Math.max(Math.ceil((stop - start) / step), 0); - var range = Array(length); - - for (var idx = 0; idx < length; idx++, start += step) { - range[idx] = start; - } - - return range; - }; - - // Function (ahem) Functions - // ------------------ - - // Determines whether to execute a function as a constructor - // or a normal function with the provided arguments - var executeBound = function(sourceFunc, boundFunc, context, callingContext, args) { - if (!(callingContext instanceof boundFunc)) return sourceFunc.apply(context, args); - var self = baseCreate(sourceFunc.prototype); - var result = sourceFunc.apply(self, args); - if (_.isObject(result)) return result; - return self; - }; - - // Create a function bound to a given object (assigning `this`, and arguments, - // optionally). Delegates to **ECMAScript 5**'s native `Function.bind` if - // available. - _.bind = function(func, context) { - if (nativeBind && func.bind === nativeBind) return nativeBind.apply(func, slice.call(arguments, 1)); - if (!_.isFunction(func)) throw new TypeError('Bind must be called on a function'); - var args = slice.call(arguments, 2); - var bound = function() { - return executeBound(func, bound, context, this, args.concat(slice.call(arguments))); - }; - return bound; - }; - - // Partially apply a function by creating a version that has had some of its - // arguments pre-filled, without changing its dynamic `this` context. _ acts - // as a placeholder, allowing any combination of arguments to be pre-filled. - _.partial = function(func) { - var boundArgs = slice.call(arguments, 1); - var bound = function() { - var position = 0, length = boundArgs.length; - var args = Array(length); - for (var i = 0; i < length; i++) { - args[i] = boundArgs[i] === _ ? arguments[position++] : boundArgs[i]; - } - while (position < arguments.length) args.push(arguments[position++]); - return executeBound(func, bound, this, this, args); - }; - return bound; - }; - - // Bind a number of an object's methods to that object. Remaining arguments - // are the method names to be bound. Useful for ensuring that all callbacks - // defined on an object belong to it. - _.bindAll = function(obj) { - var i, length = arguments.length, key; - if (length <= 1) throw new Error('bindAll must be passed function names'); - for (i = 1; i < length; i++) { - key = arguments[i]; - obj[key] = _.bind(obj[key], obj); - } - return obj; - }; - - // Memoize an expensive function by storing its results. - _.memoize = function(func, hasher) { - var memoize = function(key) { - var cache = memoize.cache; - var address = '' + (hasher ? hasher.apply(this, arguments) : key); - if (!_.has(cache, address)) cache[address] = func.apply(this, arguments); - return cache[address]; - }; - memoize.cache = {}; - return memoize; - }; - - // Delays a function for the given number of milliseconds, and then calls - // it with the arguments supplied. - _.delay = function(func, wait) { - var args = slice.call(arguments, 2); - return setTimeout(function(){ - return func.apply(null, args); - }, wait); - }; - - // Defers a function, scheduling it to run after the current call stack has - // cleared. - _.defer = _.partial(_.delay, _, 1); - - // Returns a function, that, when invoked, will only be triggered at most once - // during a given window of time. Normally, the throttled function will run - // as much as it can, without ever going more than once per `wait` duration; - // but if you'd like to disable the execution on the leading edge, pass - // `{leading: false}`. To disable execution on the trailing edge, ditto. - _.throttle = function(func, wait, options) { - var context, args, result; - var timeout = null; - var previous = 0; - if (!options) options = {}; - var later = function() { - previous = options.leading === false ? 0 : _.now(); - timeout = null; - result = func.apply(context, args); - if (!timeout) context = args = null; - }; - return function() { - var now = _.now(); - if (!previous && options.leading === false) previous = now; - var remaining = wait - (now - previous); - context = this; - args = arguments; - if (remaining <= 0 || remaining > wait) { - if (timeout) { - clearTimeout(timeout); - timeout = null; - } - previous = now; - result = func.apply(context, args); - if (!timeout) context = args = null; - } else if (!timeout && options.trailing !== false) { - timeout = setTimeout(later, remaining); - } - return result; - }; - }; - - // Returns a function, that, as long as it continues to be invoked, will not - // be triggered. The function will be called after it stops being called for - // N milliseconds. If `immediate` is passed, trigger the function on the - // leading edge, instead of the trailing. - _.debounce = function(func, wait, immediate) { - var timeout, args, context, timestamp, result; - - var later = function() { - var last = _.now() - timestamp; - - if (last < wait && last >= 0) { - timeout = setTimeout(later, wait - last); - } else { - timeout = null; - if (!immediate) { - result = func.apply(context, args); - if (!timeout) context = args = null; - } - } - }; - - return function() { - context = this; - args = arguments; - timestamp = _.now(); - var callNow = immediate && !timeout; - if (!timeout) timeout = setTimeout(later, wait); - if (callNow) { - result = func.apply(context, args); - context = args = null; - } - - return result; - }; - }; - - // Returns the first function passed as an argument to the second, - // allowing you to adjust arguments, run code before and after, and - // conditionally execute the original function. - _.wrap = function(func, wrapper) { - return _.partial(wrapper, func); - }; - - // Returns a negated version of the passed-in predicate. - _.negate = function(predicate) { - return function() { - return !predicate.apply(this, arguments); - }; - }; - - // Returns a function that is the composition of a list of functions, each - // consuming the return value of the function that follows. - _.compose = function() { - var args = arguments; - var start = args.length - 1; - return function() { - var i = start; - var result = args[start].apply(this, arguments); - while (i--) result = args[i].call(this, result); - return result; - }; - }; - - // Returns a function that will only be executed on and after the Nth call. - _.after = function(times, func) { - return function() { - if (--times < 1) { - return func.apply(this, arguments); - } - }; - }; - - // Returns a function that will only be executed up to (but not including) the Nth call. - _.before = function(times, func) { - var memo; - return function() { - if (--times > 0) { - memo = func.apply(this, arguments); - } - if (times <= 1) func = null; - return memo; - }; - }; - - // Returns a function that will be executed at most one time, no matter how - // often you call it. Useful for lazy initialization. - _.once = _.partial(_.before, 2); - - // Object Functions - // ---------------- - - // Keys in IE < 9 that won't be iterated by `for key in ...` and thus missed. - var hasEnumBug = !{toString: null}.propertyIsEnumerable('toString'); - var nonEnumerableProps = ['valueOf', 'isPrototypeOf', 'toString', - 'propertyIsEnumerable', 'hasOwnProperty', 'toLocaleString']; - - function collectNonEnumProps(obj, keys) { - var nonEnumIdx = nonEnumerableProps.length; - var constructor = obj.constructor; - var proto = (_.isFunction(constructor) && constructor.prototype) || ObjProto; - - // Constructor is a special case. - var prop = 'constructor'; - if (_.has(obj, prop) && !_.contains(keys, prop)) keys.push(prop); - - while (nonEnumIdx--) { - prop = nonEnumerableProps[nonEnumIdx]; - if (prop in obj && obj[prop] !== proto[prop] && !_.contains(keys, prop)) { - keys.push(prop); - } - } - } - - // Retrieve the names of an object's own properties. - // Delegates to **ECMAScript 5**'s native `Object.keys` - _.keys = function(obj) { - if (!_.isObject(obj)) return []; - if (nativeKeys) return nativeKeys(obj); - var keys = []; - for (var key in obj) if (_.has(obj, key)) keys.push(key); - // Ahem, IE < 9. - if (hasEnumBug) collectNonEnumProps(obj, keys); - return keys; - }; - - // Retrieve all the property names of an object. - _.allKeys = function(obj) { - if (!_.isObject(obj)) return []; - var keys = []; - for (var key in obj) keys.push(key); - // Ahem, IE < 9. - if (hasEnumBug) collectNonEnumProps(obj, keys); - return keys; - }; - - // Retrieve the values of an object's properties. - _.values = function(obj) { - var keys = _.keys(obj); - var length = keys.length; - var values = Array(length); - for (var i = 0; i < length; i++) { - values[i] = obj[keys[i]]; - } - return values; - }; - - // Returns the results of applying the iteratee to each element of the object - // In contrast to _.map it returns an object - _.mapObject = function(obj, iteratee, context) { - iteratee = cb(iteratee, context); - var keys = _.keys(obj), - length = keys.length, - results = {}, - currentKey; - for (var index = 0; index < length; index++) { - currentKey = keys[index]; - results[currentKey] = iteratee(obj[currentKey], currentKey, obj); - } - return results; - }; - - // Convert an object into a list of `[key, value]` pairs. - _.pairs = function(obj) { - var keys = _.keys(obj); - var length = keys.length; - var pairs = Array(length); - for (var i = 0; i < length; i++) { - pairs[i] = [keys[i], obj[keys[i]]]; - } - return pairs; - }; - - // Invert the keys and values of an object. The values must be serializable. - _.invert = function(obj) { - var result = {}; - var keys = _.keys(obj); - for (var i = 0, length = keys.length; i < length; i++) { - result[obj[keys[i]]] = keys[i]; - } - return result; - }; - - // Return a sorted list of the function names available on the object. - // Aliased as `methods` - _.functions = _.methods = function(obj) { - var names = []; - for (var key in obj) { - if (_.isFunction(obj[key])) names.push(key); - } - return names.sort(); - }; - - // Extend a given object with all the properties in passed-in object(s). - _.extend = createAssigner(_.allKeys); - - // Assigns a given object with all the own properties in the passed-in object(s) - // (https://developer.mozilla.org/docs/Web/JavaScript/Reference/Global_Objects/Object/assign) - _.extendOwn = _.assign = createAssigner(_.keys); - - // Returns the first key on an object that passes a predicate test - _.findKey = function(obj, predicate, context) { - predicate = cb(predicate, context); - var keys = _.keys(obj), key; - for (var i = 0, length = keys.length; i < length; i++) { - key = keys[i]; - if (predicate(obj[key], key, obj)) return key; - } - }; - - // Return a copy of the object only containing the whitelisted properties. - _.pick = function(object, oiteratee, context) { - var result = {}, obj = object, iteratee, keys; - if (obj == null) return result; - if (_.isFunction(oiteratee)) { - keys = _.allKeys(obj); - iteratee = optimizeCb(oiteratee, context); - } else { - keys = flatten(arguments, false, false, 1); - iteratee = function(value, key, obj) { return key in obj; }; - obj = Object(obj); - } - for (var i = 0, length = keys.length; i < length; i++) { - var key = keys[i]; - var value = obj[key]; - if (iteratee(value, key, obj)) result[key] = value; - } - return result; - }; - - // Return a copy of the object without the blacklisted properties. - _.omit = function(obj, iteratee, context) { - if (_.isFunction(iteratee)) { - iteratee = _.negate(iteratee); - } else { - var keys = _.map(flatten(arguments, false, false, 1), String); - iteratee = function(value, key) { - return !_.contains(keys, key); - }; - } - return _.pick(obj, iteratee, context); - }; - - // Fill in a given object with default properties. - _.defaults = createAssigner(_.allKeys, true); - - // Creates an object that inherits from the given prototype object. - // If additional properties are provided then they will be added to the - // created object. - _.create = function(prototype, props) { - var result = baseCreate(prototype); - if (props) _.extendOwn(result, props); - return result; - }; - - // Create a (shallow-cloned) duplicate of an object. - _.clone = function(obj) { - if (!_.isObject(obj)) return obj; - return _.isArray(obj) ? obj.slice() : _.extend({}, obj); - }; - - // Invokes interceptor with the obj, and then returns obj. - // The primary purpose of this method is to "tap into" a method chain, in - // order to perform operations on intermediate results within the chain. - _.tap = function(obj, interceptor) { - interceptor(obj); - return obj; - }; - - // Returns whether an object has a given set of `key:value` pairs. - _.isMatch = function(object, attrs) { - var keys = _.keys(attrs), length = keys.length; - if (object == null) return !length; - var obj = Object(object); - for (var i = 0; i < length; i++) { - var key = keys[i]; - if (attrs[key] !== obj[key] || !(key in obj)) return false; - } - return true; - }; - - - // Internal recursive comparison function for `isEqual`. - var eq = function(a, b, aStack, bStack) { - // Identical objects are equal. `0 === -0`, but they aren't identical. - // See the [Harmony `egal` proposal](http://wiki.ecmascript.org/doku.php?id=harmony:egal). - if (a === b) return a !== 0 || 1 / a === 1 / b; - // A strict comparison is necessary because `null == undefined`. - if (a == null || b == null) return a === b; - // Unwrap any wrapped objects. - if (a instanceof _) a = a._wrapped; - if (b instanceof _) b = b._wrapped; - // Compare `[[Class]]` names. - var className = toString.call(a); - if (className !== toString.call(b)) return false; - switch (className) { - // Strings, numbers, regular expressions, dates, and booleans are compared by value. - case '[object RegExp]': - // RegExps are coerced to strings for comparison (Note: '' + /a/i === '/a/i') - case '[object String]': - // Primitives and their corresponding object wrappers are equivalent; thus, `"5"` is - // equivalent to `new String("5")`. - return '' + a === '' + b; - case '[object Number]': - // `NaN`s are equivalent, but non-reflexive. - // Object(NaN) is equivalent to NaN - if (+a !== +a) return +b !== +b; - // An `egal` comparison is performed for other numeric values. - return +a === 0 ? 1 / +a === 1 / b : +a === +b; - case '[object Date]': - case '[object Boolean]': - // Coerce dates and booleans to numeric primitive values. Dates are compared by their - // millisecond representations. Note that invalid dates with millisecond representations - // of `NaN` are not equivalent. - return +a === +b; - } - - var areArrays = className === '[object Array]'; - if (!areArrays) { - if (typeof a != 'object' || typeof b != 'object') return false; - - // Objects with different constructors are not equivalent, but `Object`s or `Array`s - // from different frames are. - var aCtor = a.constructor, bCtor = b.constructor; - if (aCtor !== bCtor && !(_.isFunction(aCtor) && aCtor instanceof aCtor && - _.isFunction(bCtor) && bCtor instanceof bCtor) - && ('constructor' in a && 'constructor' in b)) { - return false; - } - } - // Assume equality for cyclic structures. The algorithm for detecting cyclic - // structures is adapted from ES 5.1 section 15.12.3, abstract operation `JO`. - - // Initializing stack of traversed objects. - // It's done here since we only need them for objects and arrays comparison. - aStack = aStack || []; - bStack = bStack || []; - var length = aStack.length; - while (length--) { - // Linear search. Performance is inversely proportional to the number of - // unique nested structures. - if (aStack[length] === a) return bStack[length] === b; - } - - // Add the first object to the stack of traversed objects. - aStack.push(a); - bStack.push(b); - - // Recursively compare objects and arrays. - if (areArrays) { - // Compare array lengths to determine if a deep comparison is necessary. - length = a.length; - if (length !== b.length) return false; - // Deep compare the contents, ignoring non-numeric properties. - while (length--) { - if (!eq(a[length], b[length], aStack, bStack)) return false; - } - } else { - // Deep compare objects. - var keys = _.keys(a), key; - length = keys.length; - // Ensure that both objects contain the same number of properties before comparing deep equality. - if (_.keys(b).length !== length) return false; - while (length--) { - // Deep compare each member - key = keys[length]; - if (!(_.has(b, key) && eq(a[key], b[key], aStack, bStack))) return false; - } - } - // Remove the first object from the stack of traversed objects. - aStack.pop(); - bStack.pop(); - return true; - }; - - // Perform a deep comparison to check if two objects are equal. - _.isEqual = function(a, b) { - return eq(a, b); - }; - - // Is a given array, string, or object empty? - // An "empty" object has no enumerable own-properties. - _.isEmpty = function(obj) { - if (obj == null) return true; - if (isArrayLike(obj) && (_.isArray(obj) || _.isString(obj) || _.isArguments(obj))) return obj.length === 0; - return _.keys(obj).length === 0; - }; - - // Is a given value a DOM element? - _.isElement = function(obj) { - return !!(obj && obj.nodeType === 1); - }; - - // Is a given value an array? - // Delegates to ECMA5's native Array.isArray - _.isArray = nativeIsArray || function(obj) { - return toString.call(obj) === '[object Array]'; - }; - - // Is a given variable an object? - _.isObject = function(obj) { - var type = typeof obj; - return type === 'function' || type === 'object' && !!obj; - }; - - // Add some isType methods: isArguments, isFunction, isString, isNumber, isDate, isRegExp, isError. - _.each(['Arguments', 'Function', 'String', 'Number', 'Date', 'RegExp', 'Error'], function(name) { - _['is' + name] = function(obj) { - return toString.call(obj) === '[object ' + name + ']'; - }; - }); - - // Define a fallback version of the method in browsers (ahem, IE < 9), where - // there isn't any inspectable "Arguments" type. - if (!_.isArguments(arguments)) { - _.isArguments = function(obj) { - return _.has(obj, 'callee'); - }; - } - - // Optimize `isFunction` if appropriate. Work around some typeof bugs in old v8, - // IE 11 (#1621), and in Safari 8 (#1929). - if (typeof /./ != 'function' && typeof Int8Array != 'object') { - _.isFunction = function(obj) { - return typeof obj == 'function' || false; - }; - } - - // Is a given object a finite number? - _.isFinite = function(obj) { - return isFinite(obj) && !isNaN(parseFloat(obj)); - }; - - // Is the given value `NaN`? (NaN is the only number which does not equal itself). - _.isNaN = function(obj) { - return _.isNumber(obj) && obj !== +obj; - }; - - // Is a given value a boolean? - _.isBoolean = function(obj) { - return obj === true || obj === false || toString.call(obj) === '[object Boolean]'; - }; - - // Is a given value equal to null? - _.isNull = function(obj) { - return obj === null; - }; - - // Is a given variable undefined? - _.isUndefined = function(obj) { - return obj === void 0; - }; - - // Shortcut function for checking if an object has a given property directly - // on itself (in other words, not on a prototype). - _.has = function(obj, key) { - return obj != null && hasOwnProperty.call(obj, key); - }; - - // Utility Functions - // ----------------- - - // Run Underscore.js in *noConflict* mode, returning the `_` variable to its - // previous owner. Returns a reference to the Underscore object. - _.noConflict = function() { - root._ = previousUnderscore; - return this; - }; - - // Keep the identity function around for default iteratees. - _.identity = function(value) { - return value; - }; - - // Predicate-generating functions. Often useful outside of Underscore. - _.constant = function(value) { - return function() { - return value; - }; - }; - - _.noop = function(){}; - - _.property = property; - - // Generates a function for a given object that returns a given property. - _.propertyOf = function(obj) { - return obj == null ? function(){} : function(key) { - return obj[key]; - }; - }; - - // Returns a predicate for checking whether an object has a given set of - // `key:value` pairs. - _.matcher = _.matches = function(attrs) { - attrs = _.extendOwn({}, attrs); - return function(obj) { - return _.isMatch(obj, attrs); - }; - }; - - // Run a function **n** times. - _.times = function(n, iteratee, context) { - var accum = Array(Math.max(0, n)); - iteratee = optimizeCb(iteratee, context, 1); - for (var i = 0; i < n; i++) accum[i] = iteratee(i); - return accum; - }; - - // Return a random integer between min and max (inclusive). - _.random = function(min, max) { - if (max == null) { - max = min; - min = 0; - } - return min + Math.floor(Math.random() * (max - min + 1)); - }; - - // A (possibly faster) way to get the current timestamp as an integer. - _.now = Date.now || function() { - return new Date().getTime(); - }; - - // List of HTML entities for escaping. - var escapeMap = { - '&': '&', - '<': '<', - '>': '>', - '"': '"', - "'": ''', - '`': '`' - }; - var unescapeMap = _.invert(escapeMap); - - // Functions for escaping and unescaping strings to/from HTML interpolation. - var createEscaper = function(map) { - var escaper = function(match) { - return map[match]; - }; - // Regexes for identifying a key that needs to be escaped - var source = '(?:' + _.keys(map).join('|') + ')'; - var testRegexp = RegExp(source); - var replaceRegexp = RegExp(source, 'g'); - return function(string) { - string = string == null ? '' : '' + string; - return testRegexp.test(string) ? string.replace(replaceRegexp, escaper) : string; - }; - }; - _.escape = createEscaper(escapeMap); - _.unescape = createEscaper(unescapeMap); - - // If the value of the named `property` is a function then invoke it with the - // `object` as context; otherwise, return it. - _.result = function(object, property, fallback) { - var value = object == null ? void 0 : object[property]; - if (value === void 0) { - value = fallback; - } - return _.isFunction(value) ? value.call(object) : value; - }; - - // Generate a unique integer id (unique within the entire client session). - // Useful for temporary DOM ids. - var idCounter = 0; - _.uniqueId = function(prefix) { - var id = ++idCounter + ''; - return prefix ? prefix + id : id; - }; - - // By default, Underscore uses ERB-style template delimiters, change the - // following template settings to use alternative delimiters. - _.templateSettings = { - evaluate : /<%([\s\S]+?)%>/g, - interpolate : /<%=([\s\S]+?)%>/g, - escape : /<%-([\s\S]+?)%>/g - }; - - // When customizing `templateSettings`, if you don't want to define an - // interpolation, evaluation or escaping regex, we need one that is - // guaranteed not to match. - var noMatch = /(.)^/; - - // Certain characters need to be escaped so that they can be put into a - // string literal. - var escapes = { - "'": "'", - '\\': '\\', - '\r': 'r', - '\n': 'n', - '\u2028': 'u2028', - '\u2029': 'u2029' - }; - - var escaper = /\\|'|\r|\n|\u2028|\u2029/g; - - var escapeChar = function(match) { - return '\\' + escapes[match]; - }; - - // JavaScript micro-templating, similar to John Resig's implementation. - // Underscore templating handles arbitrary delimiters, preserves whitespace, - // and correctly escapes quotes within interpolated code. - // NB: `oldSettings` only exists for backwards compatibility. - _.template = function(text, settings, oldSettings) { - if (!settings && oldSettings) settings = oldSettings; - settings = _.defaults({}, settings, _.templateSettings); - - // Combine delimiters into one regular expression via alternation. - var matcher = RegExp([ - (settings.escape || noMatch).source, - (settings.interpolate || noMatch).source, - (settings.evaluate || noMatch).source - ].join('|') + '|$', 'g'); - - // Compile the template source, escaping string literals appropriately. - var index = 0; - var source = "__p+='"; - text.replace(matcher, function(match, escape, interpolate, evaluate, offset) { - source += text.slice(index, offset).replace(escaper, escapeChar); - index = offset + match.length; - - if (escape) { - source += "'+\n((__t=(" + escape + "))==null?'':_.escape(__t))+\n'"; - } else if (interpolate) { - source += "'+\n((__t=(" + interpolate + "))==null?'':__t)+\n'"; - } else if (evaluate) { - source += "';\n" + evaluate + "\n__p+='"; - } - - // Adobe VMs need the match returned to produce the correct offest. - return match; - }); - source += "';\n"; - - // If a variable is not specified, place data values in local scope. - if (!settings.variable) source = 'with(obj||{}){\n' + source + '}\n'; - - source = "var __t,__p='',__j=Array.prototype.join," + - "print=function(){__p+=__j.call(arguments,'');};\n" + - source + 'return __p;\n'; - - try { - var render = new Function(settings.variable || 'obj', '_', source); - } catch (e) { - e.source = source; - throw e; - } - - var template = function(data) { - return render.call(this, data, _); - }; - - // Provide the compiled source as a convenience for precompilation. - var argument = settings.variable || 'obj'; - template.source = 'function(' + argument + '){\n' + source + '}'; - - return template; - }; - - // Add a "chain" function. Start chaining a wrapped Underscore object. - _.chain = function(obj) { - var instance = _(obj); - instance._chain = true; - return instance; - }; - - // OOP - // --------------- - // If Underscore is called as a function, it returns a wrapped object that - // can be used OO-style. This wrapper holds altered versions of all the - // underscore functions. Wrapped objects may be chained. - - // Helper function to continue chaining intermediate results. - var result = function(instance, obj) { - return instance._chain ? _(obj).chain() : obj; - }; - - // Add your own custom functions to the Underscore object. - _.mixin = function(obj) { - _.each(_.functions(obj), function(name) { - var func = _[name] = obj[name]; - _.prototype[name] = function() { - var args = [this._wrapped]; - push.apply(args, arguments); - return result(this, func.apply(_, args)); - }; - }); - }; - - // Add all of the Underscore functions to the wrapper object. - _.mixin(_); - - // Add all mutator Array functions to the wrapper. - _.each(['pop', 'push', 'reverse', 'shift', 'sort', 'splice', 'unshift'], function(name) { - var method = ArrayProto[name]; - _.prototype[name] = function() { - var obj = this._wrapped; - method.apply(obj, arguments); - if ((name === 'shift' || name === 'splice') && obj.length === 0) delete obj[0]; - return result(this, obj); - }; - }); - - // Add all accessor Array functions to the wrapper. - _.each(['concat', 'join', 'slice'], function(name) { - var method = ArrayProto[name]; - _.prototype[name] = function() { - return result(this, method.apply(this._wrapped, arguments)); - }; - }); - - // Extracts the result from a wrapped and chained object. - _.prototype.value = function() { - return this._wrapped; - }; - - // Provide unwrapping proxy for some methods used in engine operations - // such as arithmetic and JSON stringification. - _.prototype.valueOf = _.prototype.toJSON = _.prototype.value; - - _.prototype.toString = function() { - return '' + this._wrapped; - }; - - // AMD registration happens at the end for compatibility with AMD loaders - // that may not enforce next-turn semantics on modules. Even though general - // practice for AMD registration is to be anonymous, underscore registers - // as a named module because, like jQuery, it is a base library that is - // popular enough to be bundled in a third party lib, but not be part of - // an AMD load request. Those cases could generate an error when an - // anonymous define() is called outside of a loader request. - if (typeof define === 'function' && define.amd) { - define('underscore', [], function() { - return _; - }); - } -}.call(this)); - -},{}],26:[function(require,module,exports){ -arguments[4][19][0].apply(exports,arguments) -},{"dup":19}],27:[function(require,module,exports){ -module.exports = function isBuffer(arg) { - return arg && typeof arg === 'object' - && typeof arg.copy === 'function' - && typeof arg.fill === 'function' - && typeof arg.readUInt8 === 'function'; -} -},{}],28:[function(require,module,exports){ -(function (process,global){ -// Copyright Joyent, Inc. and other Node contributors. -// -// Permission is hereby granted, free of charge, to any person obtaining a -// copy of this software and associated documentation files (the -// "Software"), to deal in the Software without restriction, including -// without limitation the rights to use, copy, modify, merge, publish, -// distribute, sublicense, and/or sell copies of the Software, and to permit -// persons to whom the Software is furnished to do so, subject to the -// following conditions: -// -// The above copyright notice and this permission notice shall be included -// in all copies or substantial portions of the Software. -// -// THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS -// OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF -// MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN -// NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, -// DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR -// OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE -// USE OR OTHER DEALINGS IN THE SOFTWARE. - -var formatRegExp = /%[sdj%]/g; -exports.format = function(f) { - if (!isString(f)) { - var objects = []; - for (var i = 0; i < arguments.length; i++) { - objects.push(inspect(arguments[i])); - } - return objects.join(' '); - } - - var i = 1; - var args = arguments; - var len = args.length; - var str = String(f).replace(formatRegExp, function(x) { - if (x === '%%') return '%'; - if (i >= len) return x; - switch (x) { - case '%s': return String(args[i++]); - case '%d': return Number(args[i++]); - case '%j': - try { - return JSON.stringify(args[i++]); - } catch (_) { - return '[Circular]'; - } - default: - return x; - } - }); - for (var x = args[i]; i < len; x = args[++i]) { - if (isNull(x) || !isObject(x)) { - str += ' ' + x; - } else { - str += ' ' + inspect(x); - } - } - return str; -}; - - -// Mark that a method should not be used. -// Returns a modified function which warns once by default. -// If --no-deprecation is set, then it is a no-op. -exports.deprecate = function(fn, msg) { - // Allow for deprecating things in the process of starting up. - if (isUndefined(global.process)) { - return function() { - return exports.deprecate(fn, msg).apply(this, arguments); - }; - } - - if (process.noDeprecation === true) { - return fn; - } - - var warned = false; - function deprecated() { - if (!warned) { - if (process.throwDeprecation) { - throw new Error(msg); - } else if (process.traceDeprecation) { - console.trace(msg); - } else { - console.error(msg); - } - warned = true; - } - return fn.apply(this, arguments); - } - - return deprecated; -}; - - -var debugs = {}; -var debugEnviron; -exports.debuglog = function(set) { - if (isUndefined(debugEnviron)) - debugEnviron = process.env.NODE_DEBUG || ''; - set = set.toUpperCase(); - if (!debugs[set]) { - if (new RegExp('\\b' + set + '\\b', 'i').test(debugEnviron)) { - var pid = process.pid; - debugs[set] = function() { - var msg = exports.format.apply(exports, arguments); - console.error('%s %d: %s', set, pid, msg); - }; - } else { - debugs[set] = function() {}; - } - } - return debugs[set]; -}; - - -/** - * Echos the value of a value. Trys to print the value out - * in the best way possible given the different types. - * - * @param {Object} obj The object to print out. - * @param {Object} opts Optional options object that alters the output. - */ -/* legacy: obj, showHidden, depth, colors*/ -function inspect(obj, opts) { - // default options - var ctx = { - seen: [], - stylize: stylizeNoColor - }; - // legacy... - if (arguments.length >= 3) ctx.depth = arguments[2]; - if (arguments.length >= 4) ctx.colors = arguments[3]; - if (isBoolean(opts)) { - // legacy... - ctx.showHidden = opts; - } else if (opts) { - // got an "options" object - exports._extend(ctx, opts); - } - // set default options - if (isUndefined(ctx.showHidden)) ctx.showHidden = false; - if (isUndefined(ctx.depth)) ctx.depth = 2; - if (isUndefined(ctx.colors)) ctx.colors = false; - if (isUndefined(ctx.customInspect)) ctx.customInspect = true; - if (ctx.colors) ctx.stylize = stylizeWithColor; - return formatValue(ctx, obj, ctx.depth); -} -exports.inspect = inspect; - - -// http://en.wikipedia.org/wiki/ANSI_escape_code#graphics -inspect.colors = { - 'bold' : [1, 22], - 'italic' : [3, 23], - 'underline' : [4, 24], - 'inverse' : [7, 27], - 'white' : [37, 39], - 'grey' : [90, 39], - 'black' : [30, 39], - 'blue' : [34, 39], - 'cyan' : [36, 39], - 'green' : [32, 39], - 'magenta' : [35, 39], - 'red' : [31, 39], - 'yellow' : [33, 39] -}; - -// Don't use 'blue' not visible on cmd.exe -inspect.styles = { - 'special': 'cyan', - 'number': 'yellow', - 'boolean': 'yellow', - 'undefined': 'grey', - 'null': 'bold', - 'string': 'green', - 'date': 'magenta', - // "name": intentionally not styling - 'regexp': 'red' -}; - - -function stylizeWithColor(str, styleType) { - var style = inspect.styles[styleType]; - - if (style) { - return '\u001b[' + inspect.colors[style][0] + 'm' + str + - '\u001b[' + inspect.colors[style][1] + 'm'; - } else { - return str; - } -} - - -function stylizeNoColor(str, styleType) { - return str; -} - - -function arrayToHash(array) { - var hash = {}; - - array.forEach(function(val, idx) { - hash[val] = true; - }); - - return hash; -} - - -function formatValue(ctx, value, recurseTimes) { - // Provide a hook for user-specified inspect functions. - // Check that value is an object with an inspect function on it - if (ctx.customInspect && - value && - isFunction(value.inspect) && - // Filter out the util module, it's inspect function is special - value.inspect !== exports.inspect && - // Also filter out any prototype objects using the circular check. - !(value.constructor && value.constructor.prototype === value)) { - var ret = value.inspect(recurseTimes, ctx); - if (!isString(ret)) { - ret = formatValue(ctx, ret, recurseTimes); - } - return ret; - } - - // Primitive types cannot have properties - var primitive = formatPrimitive(ctx, value); - if (primitive) { - return primitive; - } - - // Look up the keys of the object. - var keys = Object.keys(value); - var visibleKeys = arrayToHash(keys); - - if (ctx.showHidden) { - keys = Object.getOwnPropertyNames(value); - } - - // IE doesn't make error fields non-enumerable - // http://msdn.microsoft.com/en-us/library/ie/dww52sbt(v=vs.94).aspx - if (isError(value) - && (keys.indexOf('message') >= 0 || keys.indexOf('description') >= 0)) { - return formatError(value); - } - - // Some type of object without properties can be shortcutted. - if (keys.length === 0) { - if (isFunction(value)) { - var name = value.name ? ': ' + value.name : ''; - return ctx.stylize('[Function' + name + ']', 'special'); - } - if (isRegExp(value)) { - return ctx.stylize(RegExp.prototype.toString.call(value), 'regexp'); - } - if (isDate(value)) { - return ctx.stylize(Date.prototype.toString.call(value), 'date'); - } - if (isError(value)) { - return formatError(value); - } - } - - var base = '', array = false, braces = ['{', '}']; - - // Make Array say that they are Array - if (isArray(value)) { - array = true; - braces = ['[', ']']; - } - - // Make functions say that they are functions - if (isFunction(value)) { - var n = value.name ? ': ' + value.name : ''; - base = ' [Function' + n + ']'; - } - - // Make RegExps say that they are RegExps - if (isRegExp(value)) { - base = ' ' + RegExp.prototype.toString.call(value); - } - - // Make dates with properties first say the date - if (isDate(value)) { - base = ' ' + Date.prototype.toUTCString.call(value); - } - - // Make error with message first say the error - if (isError(value)) { - base = ' ' + formatError(value); - } - - if (keys.length === 0 && (!array || value.length == 0)) { - return braces[0] + base + braces[1]; - } - - if (recurseTimes < 0) { - if (isRegExp(value)) { - return ctx.stylize(RegExp.prototype.toString.call(value), 'regexp'); - } else { - return ctx.stylize('[Object]', 'special'); - } - } - - ctx.seen.push(value); - - var output; - if (array) { - output = formatArray(ctx, value, recurseTimes, visibleKeys, keys); - } else { - output = keys.map(function(key) { - return formatProperty(ctx, value, recurseTimes, visibleKeys, key, array); - }); - } - - ctx.seen.pop(); - - return reduceToSingleString(output, base, braces); -} - - -function formatPrimitive(ctx, value) { - if (isUndefined(value)) - return ctx.stylize('undefined', 'undefined'); - if (isString(value)) { - var simple = '\'' + JSON.stringify(value).replace(/^"|"$/g, '') - .replace(/'/g, "\\'") - .replace(/\\"/g, '"') + '\''; - return ctx.stylize(simple, 'string'); - } - if (isNumber(value)) - return ctx.stylize('' + value, 'number'); - if (isBoolean(value)) - return ctx.stylize('' + value, 'boolean'); - // For some reason typeof null is "object", so special case here. - if (isNull(value)) - return ctx.stylize('null', 'null'); -} - - -function formatError(value) { - return '[' + Error.prototype.toString.call(value) + ']'; -} - - -function formatArray(ctx, value, recurseTimes, visibleKeys, keys) { - var output = []; - for (var i = 0, l = value.length; i < l; ++i) { - if (hasOwnProperty(value, String(i))) { - output.push(formatProperty(ctx, value, recurseTimes, visibleKeys, - String(i), true)); - } else { - output.push(''); - } - } - keys.forEach(function(key) { - if (!key.match(/^\d+$/)) { - output.push(formatProperty(ctx, value, recurseTimes, visibleKeys, - key, true)); - } - }); - return output; -} - - -function formatProperty(ctx, value, recurseTimes, visibleKeys, key, array) { - var name, str, desc; - desc = Object.getOwnPropertyDescriptor(value, key) || { value: value[key] }; - if (desc.get) { - if (desc.set) { - str = ctx.stylize('[Getter/Setter]', 'special'); - } else { - str = ctx.stylize('[Getter]', 'special'); - } - } else { - if (desc.set) { - str = ctx.stylize('[Setter]', 'special'); - } - } - if (!hasOwnProperty(visibleKeys, key)) { - name = '[' + key + ']'; - } - if (!str) { - if (ctx.seen.indexOf(desc.value) < 0) { - if (isNull(recurseTimes)) { - str = formatValue(ctx, desc.value, null); - } else { - str = formatValue(ctx, desc.value, recurseTimes - 1); - } - if (str.indexOf('\n') > -1) { - if (array) { - str = str.split('\n').map(function(line) { - return ' ' + line; - }).join('\n').substr(2); - } else { - str = '\n' + str.split('\n').map(function(line) { - return ' ' + line; - }).join('\n'); - } - } - } else { - str = ctx.stylize('[Circular]', 'special'); - } - } - if (isUndefined(name)) { - if (array && key.match(/^\d+$/)) { - return str; - } - name = JSON.stringify('' + key); - if (name.match(/^"([a-zA-Z_][a-zA-Z_0-9]*)"$/)) { - name = name.substr(1, name.length - 2); - name = ctx.stylize(name, 'name'); - } else { - name = name.replace(/'/g, "\\'") - .replace(/\\"/g, '"') - .replace(/(^"|"$)/g, "'"); - name = ctx.stylize(name, 'string'); - } - } - - return name + ': ' + str; -} - - -function reduceToSingleString(output, base, braces) { - var numLinesEst = 0; - var length = output.reduce(function(prev, cur) { - numLinesEst++; - if (cur.indexOf('\n') >= 0) numLinesEst++; - return prev + cur.replace(/\u001b\[\d\d?m/g, '').length + 1; - }, 0); - - if (length > 60) { - return braces[0] + - (base === '' ? '' : base + '\n ') + - ' ' + - output.join(',\n ') + - ' ' + - braces[1]; - } - - return braces[0] + base + ' ' + output.join(', ') + ' ' + braces[1]; -} - - -// NOTE: These type checking functions intentionally don't use `instanceof` -// because it is fragile and can be easily faked with `Object.create()`. -function isArray(ar) { - return Array.isArray(ar); -} -exports.isArray = isArray; - -function isBoolean(arg) { - return typeof arg === 'boolean'; -} -exports.isBoolean = isBoolean; - -function isNull(arg) { - return arg === null; -} -exports.isNull = isNull; - -function isNullOrUndefined(arg) { - return arg == null; -} -exports.isNullOrUndefined = isNullOrUndefined; - -function isNumber(arg) { - return typeof arg === 'number'; -} -exports.isNumber = isNumber; - -function isString(arg) { - return typeof arg === 'string'; -} -exports.isString = isString; - -function isSymbol(arg) { - return typeof arg === 'symbol'; -} -exports.isSymbol = isSymbol; - -function isUndefined(arg) { - return arg === void 0; -} -exports.isUndefined = isUndefined; - -function isRegExp(re) { - return isObject(re) && objectToString(re) === '[object RegExp]'; -} -exports.isRegExp = isRegExp; - -function isObject(arg) { - return typeof arg === 'object' && arg !== null; -} -exports.isObject = isObject; - -function isDate(d) { - return isObject(d) && objectToString(d) === '[object Date]'; -} -exports.isDate = isDate; - -function isError(e) { - return isObject(e) && - (objectToString(e) === '[object Error]' || e instanceof Error); -} -exports.isError = isError; - -function isFunction(arg) { - return typeof arg === 'function'; -} -exports.isFunction = isFunction; - -function isPrimitive(arg) { - return arg === null || - typeof arg === 'boolean' || - typeof arg === 'number' || - typeof arg === 'string' || - typeof arg === 'symbol' || // ES6 symbol - typeof arg === 'undefined'; -} -exports.isPrimitive = isPrimitive; - -exports.isBuffer = require('./support/isBuffer'); - -function objectToString(o) { - return Object.prototype.toString.call(o); -} - - -function pad(n) { - return n < 10 ? '0' + n.toString(10) : n.toString(10); -} - - -var months = ['Jan', 'Feb', 'Mar', 'Apr', 'May', 'Jun', 'Jul', 'Aug', 'Sep', - 'Oct', 'Nov', 'Dec']; - -// 26 Feb 16:19:34 -function timestamp() { - var d = new Date(); - var time = [pad(d.getHours()), - pad(d.getMinutes()), - pad(d.getSeconds())].join(':'); - return [d.getDate(), months[d.getMonth()], time].join(' '); -} - - -// log is just a thin wrapper to console.log that prepends a timestamp -exports.log = function() { - console.log('%s - %s', timestamp(), exports.format.apply(exports, arguments)); -}; - - -/** - * Inherit the prototype methods from one constructor into another. - * - * The Function.prototype.inherits from lang.js rewritten as a standalone - * function (not on Function.prototype). 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this.pos1&&(e.backup(),e.emit(t.QueryLexer.TERM)),e.ignore(),e.more())return t.QueryLexer.lexText},t.QueryLexer.lexEditDistance=function(e){return e.ignore(),e.acceptDigitRun(),e.emit(t.QueryLexer.EDIT_DISTANCE),t.QueryLexer.lexText},t.QueryLexer.lexBoost=function(e){return e.ignore(),e.acceptDigitRun(),e.emit(t.QueryLexer.BOOST),t.QueryLexer.lexText},t.QueryLexer.lexEOS=function(e){e.width()>0&&e.emit(t.QueryLexer.TERM)},t.QueryLexer.termSeparator=t.tokenizer.separator,t.QueryLexer.lexText=function(e){for(;;){var r=e.next();if(r==t.QueryLexer.EOS)return t.QueryLexer.lexEOS;if(r.charCodeAt(0)==92){e.escapeCharacter();continue}if(r==":")return t.QueryLexer.lexField;if(r=="~")return e.backup(),e.width()>0&&e.emit(t.QueryLexer.TERM),t.QueryLexer.lexEditDistance;if(r=="^")return e.backup(),e.width()>0&&e.emit(t.QueryLexer.TERM),t.QueryLexer.lexBoost;if(r=="+"&&e.width()===1||r=="-"&&e.width()===1)return e.emit(t.QueryLexer.PRESENCE),t.QueryLexer.lexText;if(r.match(t.QueryLexer.termSeparator))return t.QueryLexer.lexTerm}},t.QueryParser=function(e,r){this.lexer=new t.QueryLexer(e),this.query=r,this.currentClause={},this.lexemeIdx=0},t.QueryParser.prototype.parse=function(){this.lexer.run(),this.lexemes=this.lexer.lexemes;for(var e=t.QueryParser.parseClause;e;)e=e(this);return this.query},t.QueryParser.prototype.peekLexeme=function(){return this.lexemes[this.lexemeIdx]},t.QueryParser.prototype.consumeLexeme=function(){var e=this.peekLexeme();return this.lexemeIdx+=1,e},t.QueryParser.prototype.nextClause=function(){var e=this.currentClause;this.query.clause(e),this.currentClause={}},t.QueryParser.parseClause=function(e){var r=e.peekLexeme();if(r!=null)switch(r.type){case t.QueryLexer.PRESENCE:return t.QueryParser.parsePresence;case t.QueryLexer.FIELD:return t.QueryParser.parseField;case t.QueryLexer.TERM:return t.QueryParser.parseTerm;default:var n="expected either a field or a term, found "+r.type;throw r.str.length>=1&&(n+=" with value '"+r.str+"'"),new t.QueryParseError(n,r.start,r.end)}},t.QueryParser.parsePresence=function(e){var r=e.consumeLexeme();if(r!=null){switch(r.str){case"-":e.currentClause.presence=t.Query.presence.PROHIBITED;break;case"+":e.currentClause.presence=t.Query.presence.REQUIRED;break;default:var n="unrecognised presence operator'"+r.str+"'";throw new t.QueryParseError(n,r.start,r.end)}var i=e.peekLexeme();if(i==null){var n="expecting term or field, found nothing";throw new t.QueryParseError(n,r.start,r.end)}switch(i.type){case t.QueryLexer.FIELD:return t.QueryParser.parseField;case t.QueryLexer.TERM:return t.QueryParser.parseTerm;default:var n="expecting term or field, found '"+i.type+"'";throw new t.QueryParseError(n,i.start,i.end)}}},t.QueryParser.parseField=function(e){var r=e.consumeLexeme();if(r!=null){if(e.query.allFields.indexOf(r.str)==-1){var n=e.query.allFields.map(function(o){return"'"+o+"'"}).join(", "),i="unrecognised field '"+r.str+"', possible fields: "+n;throw new t.QueryParseError(i,r.start,r.end)}e.currentClause.fields=[r.str];var s=e.peekLexeme();if(s==null){var i="expecting term, found nothing";throw new t.QueryParseError(i,r.start,r.end)}switch(s.type){case t.QueryLexer.TERM:return t.QueryParser.parseTerm;default:var i="expecting term, found '"+s.type+"'";throw new t.QueryParseError(i,s.start,s.end)}}},t.QueryParser.parseTerm=function(e){var r=e.consumeLexeme();if(r!=null){e.currentClause.term=r.str.toLowerCase(),r.str.indexOf("*")!=-1&&(e.currentClause.usePipeline=!1);var n=e.peekLexeme();if(n==null){e.nextClause();return}switch(n.type){case t.QueryLexer.TERM:return e.nextClause(),t.QueryParser.parseTerm;case t.QueryLexer.FIELD:return e.nextClause(),t.QueryParser.parseField;case t.QueryLexer.EDIT_DISTANCE:return t.QueryParser.parseEditDistance;case t.QueryLexer.BOOST:return t.QueryParser.parseBoost;case t.QueryLexer.PRESENCE:return e.nextClause(),t.QueryParser.parsePresence;default:var i="Unexpected lexeme type '"+n.type+"'";throw new t.QueryParseError(i,n.start,n.end)}}},t.QueryParser.parseEditDistance=function(e){var r=e.consumeLexeme();if(r!=null){var n=parseInt(r.str,10);if(isNaN(n)){var i="edit distance must be numeric";throw new t.QueryParseError(i,r.start,r.end)}e.currentClause.editDistance=n;var s=e.peekLexeme();if(s==null){e.nextClause();return}switch(s.type){case t.QueryLexer.TERM:return e.nextClause(),t.QueryParser.parseTerm;case t.QueryLexer.FIELD:return e.nextClause(),t.QueryParser.parseField;case t.QueryLexer.EDIT_DISTANCE:return t.QueryParser.parseEditDistance;case t.QueryLexer.BOOST:return t.QueryParser.parseBoost;case t.QueryLexer.PRESENCE:return e.nextClause(),t.QueryParser.parsePresence;default:var i="Unexpected lexeme type '"+s.type+"'";throw new t.QueryParseError(i,s.start,s.end)}}},t.QueryParser.parseBoost=function(e){var r=e.consumeLexeme();if(r!=null){var n=parseInt(r.str,10);if(isNaN(n)){var i="boost must be numeric";throw new t.QueryParseError(i,r.start,r.end)}e.currentClause.boost=n;var s=e.peekLexeme();if(s==null){e.nextClause();return}switch(s.type){case t.QueryLexer.TERM:return e.nextClause(),t.QueryParser.parseTerm;case t.QueryLexer.FIELD:return e.nextClause(),t.QueryParser.parseField;case t.QueryLexer.EDIT_DISTANCE:return t.QueryParser.parseEditDistance;case t.QueryLexer.BOOST:return t.QueryParser.parseBoost;case t.QueryLexer.PRESENCE:return e.nextClause(),t.QueryParser.parsePresence;default:var i="Unexpected lexeme type '"+s.type+"'";throw new t.QueryParseError(i,s.start,s.end)}}},function(e,r){typeof define=="function"&&define.amd?define(r):typeof ee=="object"?te.exports=r():e.lunr=r()}(this,function(){return t})})()});var q=K((Re,ne)=>{"use strict";/*! - * escape-html - * Copyright(c) 2012-2013 TJ Holowaychuk - * Copyright(c) 2015 Andreas Lubbe - * Copyright(c) 2015 Tiancheng "Timothy" Gu - * MIT Licensed - */var Le=/["'&<>]/;ne.exports=we;function we(t){var e=""+t,r=Le.exec(e);if(!r)return e;var 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lunr.QueryParser(t,e).parse(),e.clauses}function ce(t,e){var i;let r=new Set(t),n={};for(let s=0;s!n.has(i)))]}var U=class{constructor({config:e,docs:r,options:n}){this.options=n,this.documents=se(r),this.highlight=ae(e,!1),lunr.tokenizer.separator=new RegExp(e.separator),this.index=lunr(function(){e.lang.length===1&&e.lang[0]!=="en"?this.use(lunr[e.lang[0]]):e.lang.length>1&&this.use(lunr.multiLanguage(...e.lang));let i=Ee(["trimmer","stopWordFilter","stemmer"],n.pipeline);for(let s of e.lang.map(o=>o==="en"?lunr:lunr[o]))for(let o of i)this.pipeline.remove(s[o]),this.searchPipeline.remove(s[o]);this.ref("location"),this.field("title",{boost:1e3}),this.field("text"),this.field("tags",{boost:1e6,extractor:s=>{let{tags:o=[]}=s;return o.reduce((a,u)=>[...a,...lunr.tokenizer(u)],[])}});for(let s of r)this.add(s,{boost:s.boost})})}search(e){if(e)try{let r=this.highlight(e),n=ue(e).filter(o=>o.presence!==lunr.Query.presence.PROHIBITED),i=this.index.search(`${e}*`).reduce((o,{ref:a,score:u,matchData:c})=>{let h=this.documents.get(a);if(typeof h!="undefined"){let{location:y,title:g,text:b,tags:m,parent:Q}=h,p=ce(n,Object.keys(c.metadata)),d=+!Q+ +Object.values(p).every(w=>w);o.push(Z(M({location:y,title:r(g),text:r(b)},m&&{tags:m.map(r)}),{score:u*(1+d),terms:p}))}return o},[]).sort((o,a)=>a.score-o.score).reduce((o,a)=>{let u=this.documents.get(a.location);if(typeof u!="undefined"){let c="parent"in u?u.parent.location:u.location;o.set(c,[...o.get(c)||[],a])}return o},new Map),s;if(this.options.suggestions){let o=this.index.query(a=>{for(let u of n)a.term(u.term,{fields:["title"],presence:lunr.Query.presence.REQUIRED,wildcard:lunr.Query.wildcard.TRAILING})});s=o.length?Object.keys(o[0].matchData.metadata):[]}return M({items:[...i.values()]},typeof s!="undefined"&&{suggestions:s})}catch(r){console.warn(`Invalid query: ${e} \u2013 see https://bit.ly/2s3ChXG`)}return{items:[]}}};var Y;function ke(t){return z(this,null,function*(){let e="../lunr";if(typeof parent!="undefined"&&"IFrameWorker"in parent){let n=document.querySelector("script[src]"),[i]=n.src.split("/worker");e=e.replace("..",i)}let r=[];for(let n of t.lang){switch(n){case"ja":r.push(`${e}/tinyseg.js`);break;case"hi":case"th":r.push(`${e}/wordcut.js`);break}n!=="en"&&r.push(`${e}/min/lunr.${n}.min.js`)}t.lang.length>1&&r.push(`${e}/min/lunr.multi.min.js`),r.length&&(yield importScripts(`${e}/min/lunr.stemmer.support.min.js`,...r))})}function Te(t){return z(this,null,function*(){switch(t.type){case 0:return yield ke(t.data.config),Y=new U(t.data),{type:1};case 2:return{type:3,data:Y?Y.search(t.data):{items:[]}};default:throw new TypeError("Invalid message type")}})}self.lunr=le.default;addEventListener("message",t=>z(void 0,null,function*(){postMessage(yield Te(t.data))}));})(); -//# sourceMappingURL=search.16e2a7d4.min.js.map - diff --git a/pr-preview/pr-11/assets/javascripts/workers/search.16e2a7d4.min.js.map b/pr-preview/pr-11/assets/javascripts/workers/search.16e2a7d4.min.js.map deleted file mode 100644 index fa01f37..0000000 --- a/pr-preview/pr-11/assets/javascripts/workers/search.16e2a7d4.min.js.map +++ /dev/null @@ -1,8 +0,0 @@ -{ - "version": 3, - "sources": ["node_modules/lunr/lunr.js", "node_modules/escape-html/index.js", "src/assets/javascripts/integrations/search/worker/main/index.ts", "src/assets/javascripts/polyfills/index.ts", "src/assets/javascripts/integrations/search/document/index.ts", "src/assets/javascripts/integrations/search/highlighter/index.ts", "src/assets/javascripts/integrations/search/query/_/index.ts", "src/assets/javascripts/integrations/search/_/index.ts"], - "sourceRoot": "../../../..", - "sourcesContent": ["/**\n * lunr - http://lunrjs.com - A bit like Solr, but much smaller and not as bright - 2.3.9\n * Copyright (C) 2020 Oliver Nightingale\n * @license MIT\n */\n\n;(function(){\n\n/**\n * A convenience function for configuring and constructing\n * a new lunr Index.\n *\n * A lunr.Builder instance is created and the pipeline setup\n * with a trimmer, stop word filter and stemmer.\n *\n * This builder object is yielded to the configuration function\n * that is passed as a parameter, allowing the list of fields\n * and other builder parameters to be customised.\n *\n * All documents _must_ be added within the passed config function.\n *\n * @example\n * var idx = lunr(function () {\n * this.field('title')\n * this.field('body')\n * this.ref('id')\n *\n * documents.forEach(function (doc) {\n * this.add(doc)\n * }, this)\n * })\n *\n * @see {@link lunr.Builder}\n * @see {@link lunr.Pipeline}\n * @see {@link lunr.trimmer}\n * @see {@link lunr.stopWordFilter}\n * @see {@link lunr.stemmer}\n * @namespace {function} lunr\n */\nvar lunr = function (config) {\n var builder = new lunr.Builder\n\n builder.pipeline.add(\n lunr.trimmer,\n lunr.stopWordFilter,\n lunr.stemmer\n )\n\n builder.searchPipeline.add(\n lunr.stemmer\n )\n\n config.call(builder, builder)\n return builder.build()\n}\n\nlunr.version = \"2.3.9\"\n/*!\n * lunr.utils\n * Copyright (C) 2020 Oliver Nightingale\n */\n\n/**\n * A namespace containing utils for the rest of the lunr library\n * @namespace lunr.utils\n */\nlunr.utils = {}\n\n/**\n * Print a warning message to the console.\n *\n * @param {String} message The message to be printed.\n * @memberOf lunr.utils\n * @function\n */\nlunr.utils.warn = (function (global) {\n /* eslint-disable no-console */\n return function (message) {\n if (global.console && console.warn) {\n console.warn(message)\n }\n }\n /* eslint-enable no-console */\n})(this)\n\n/**\n * Convert an object to a string.\n *\n * In the case of `null` and `undefined` the function returns\n * the empty string, in all other cases the result of calling\n * `toString` on the passed object is returned.\n *\n * @param {Any} obj The object to convert to a string.\n * @return {String} string representation of the passed object.\n * @memberOf lunr.utils\n */\nlunr.utils.asString = function (obj) {\n if (obj === void 0 || obj === null) {\n return \"\"\n } else {\n return obj.toString()\n }\n}\n\n/**\n * Clones an object.\n *\n * Will create a copy of an existing object such that any mutations\n * on the copy cannot affect the original.\n *\n * Only shallow objects are supported, passing a nested object to this\n * function will cause a TypeError.\n *\n * Objects with primitives, and arrays of primitives are supported.\n *\n * @param {Object} obj The object to clone.\n * @return {Object} a clone of the passed object.\n * @throws {TypeError} when a nested object is passed.\n * @memberOf Utils\n */\nlunr.utils.clone = function (obj) {\n if (obj === null || obj === undefined) {\n return obj\n }\n\n var clone = Object.create(null),\n keys = Object.keys(obj)\n\n for (var i = 0; i < keys.length; i++) {\n var key = keys[i],\n val = obj[key]\n\n if (Array.isArray(val)) {\n clone[key] = val.slice()\n continue\n }\n\n if (typeof val === 'string' ||\n typeof val === 'number' ||\n typeof val === 'boolean') {\n clone[key] = val\n continue\n }\n\n throw new TypeError(\"clone is not deep and does not support nested objects\")\n }\n\n return clone\n}\nlunr.FieldRef = function (docRef, fieldName, stringValue) {\n this.docRef = docRef\n this.fieldName = fieldName\n this._stringValue = stringValue\n}\n\nlunr.FieldRef.joiner = \"/\"\n\nlunr.FieldRef.fromString = function (s) {\n var n = s.indexOf(lunr.FieldRef.joiner)\n\n if (n === -1) {\n throw \"malformed field ref string\"\n }\n\n var fieldRef = s.slice(0, n),\n docRef = s.slice(n + 1)\n\n return new lunr.FieldRef (docRef, fieldRef, s)\n}\n\nlunr.FieldRef.prototype.toString = function () {\n if (this._stringValue == undefined) {\n this._stringValue = this.fieldName + lunr.FieldRef.joiner + this.docRef\n }\n\n return this._stringValue\n}\n/*!\n * lunr.Set\n * Copyright (C) 2020 Oliver Nightingale\n */\n\n/**\n * A lunr set.\n *\n * @constructor\n */\nlunr.Set = function (elements) {\n this.elements = Object.create(null)\n\n if (elements) {\n this.length = elements.length\n\n for (var i = 0; i < this.length; i++) {\n this.elements[elements[i]] = true\n }\n } else {\n this.length = 0\n }\n}\n\n/**\n * A complete set that contains all elements.\n *\n * @static\n * @readonly\n * @type {lunr.Set}\n */\nlunr.Set.complete = {\n intersect: function (other) {\n return other\n },\n\n union: function () {\n return this\n },\n\n contains: function () {\n return true\n }\n}\n\n/**\n * An empty set that contains no elements.\n *\n * @static\n * @readonly\n * @type {lunr.Set}\n */\nlunr.Set.empty = {\n intersect: function () {\n return this\n },\n\n union: function (other) {\n return other\n },\n\n contains: function () {\n return false\n }\n}\n\n/**\n * Returns true if this set contains the specified object.\n *\n * @param {object} object - Object whose presence in this set is to be tested.\n * @returns {boolean} - True if this set contains the specified object.\n */\nlunr.Set.prototype.contains = function (object) {\n return !!this.elements[object]\n}\n\n/**\n * Returns a new set containing only the elements that are present in both\n * this set and the specified set.\n *\n * @param {lunr.Set} other - set to intersect with this set.\n * @returns {lunr.Set} a new set that is the intersection of this and the specified set.\n */\n\nlunr.Set.prototype.intersect = function (other) {\n var a, b, elements, intersection = []\n\n if (other === lunr.Set.complete) {\n return this\n }\n\n if (other === lunr.Set.empty) {\n return other\n }\n\n if (this.length < other.length) {\n a = this\n b = other\n } else {\n a = other\n b = this\n }\n\n elements = Object.keys(a.elements)\n\n for (var i = 0; i < elements.length; i++) {\n var element = elements[i]\n if (element in b.elements) {\n intersection.push(element)\n }\n }\n\n return new lunr.Set (intersection)\n}\n\n/**\n * Returns a new set combining the elements of this and the specified set.\n *\n * @param {lunr.Set} other - set to union with this set.\n * @return {lunr.Set} a new set that is the union of this and the specified set.\n */\n\nlunr.Set.prototype.union = function (other) {\n if (other === lunr.Set.complete) {\n return lunr.Set.complete\n }\n\n if (other === lunr.Set.empty) {\n return this\n }\n\n return new lunr.Set(Object.keys(this.elements).concat(Object.keys(other.elements)))\n}\n/**\n * A function to calculate the inverse document frequency for\n * a posting. This is shared between the builder and the index\n *\n * @private\n * @param {object} posting - The posting for a given term\n * @param {number} documentCount - The total number of documents.\n */\nlunr.idf = function (posting, documentCount) {\n var documentsWithTerm = 0\n\n for (var fieldName in posting) {\n if (fieldName == '_index') continue // Ignore the term index, its not a field\n documentsWithTerm += Object.keys(posting[fieldName]).length\n }\n\n var x = (documentCount - documentsWithTerm + 0.5) / (documentsWithTerm + 0.5)\n\n return Math.log(1 + Math.abs(x))\n}\n\n/**\n * A token wraps a string representation of a token\n * as it is passed through the text processing pipeline.\n *\n * @constructor\n * @param {string} [str=''] - The string token being wrapped.\n * @param {object} [metadata={}] - Metadata associated with this token.\n */\nlunr.Token = function (str, metadata) {\n this.str = str || \"\"\n this.metadata = metadata || {}\n}\n\n/**\n * Returns the token string that is being wrapped by this object.\n *\n * @returns {string}\n */\nlunr.Token.prototype.toString = function () {\n return this.str\n}\n\n/**\n * A token update function is used when updating or optionally\n * when cloning a token.\n *\n * @callback lunr.Token~updateFunction\n * @param {string} str - The string representation of the token.\n * @param {Object} metadata - All metadata associated with this token.\n */\n\n/**\n * Applies the given function to the wrapped string token.\n *\n * @example\n * token.update(function (str, metadata) {\n * return str.toUpperCase()\n * })\n *\n * @param {lunr.Token~updateFunction} fn - A function to apply to the token string.\n * @returns {lunr.Token}\n */\nlunr.Token.prototype.update = function (fn) {\n this.str = fn(this.str, this.metadata)\n return this\n}\n\n/**\n * Creates a clone of this token. Optionally a function can be\n * applied to the cloned token.\n *\n * @param {lunr.Token~updateFunction} [fn] - An optional function to apply to the cloned token.\n * @returns {lunr.Token}\n */\nlunr.Token.prototype.clone = function (fn) {\n fn = fn || function (s) { return s }\n return new lunr.Token (fn(this.str, this.metadata), this.metadata)\n}\n/*!\n * lunr.tokenizer\n * Copyright (C) 2020 Oliver Nightingale\n */\n\n/**\n * A function for splitting a string into tokens ready to be inserted into\n * the search index. Uses `lunr.tokenizer.separator` to split strings, change\n * the value of this property to change how strings are split into tokens.\n *\n * This tokenizer will convert its parameter to a string by calling `toString` and\n * then will split this string on the character in `lunr.tokenizer.separator`.\n * Arrays will have their elements converted to strings and wrapped in a lunr.Token.\n *\n * Optional metadata can be passed to the tokenizer, this metadata will be cloned and\n * added as metadata to every token that is created from the object to be tokenized.\n *\n * @static\n * @param {?(string|object|object[])} obj - The object to convert into tokens\n * @param {?object} metadata - Optional metadata to associate with every token\n * @returns {lunr.Token[]}\n * @see {@link lunr.Pipeline}\n */\nlunr.tokenizer = function (obj, metadata) {\n if (obj == null || obj == undefined) {\n return []\n }\n\n if (Array.isArray(obj)) {\n return obj.map(function (t) {\n return new lunr.Token(\n lunr.utils.asString(t).toLowerCase(),\n lunr.utils.clone(metadata)\n )\n })\n }\n\n var str = obj.toString().toLowerCase(),\n len = str.length,\n tokens = []\n\n for (var sliceEnd = 0, sliceStart = 0; sliceEnd <= len; sliceEnd++) {\n var char = str.charAt(sliceEnd),\n sliceLength = sliceEnd - sliceStart\n\n if ((char.match(lunr.tokenizer.separator) || sliceEnd == len)) {\n\n if (sliceLength > 0) {\n var tokenMetadata = lunr.utils.clone(metadata) || {}\n tokenMetadata[\"position\"] = [sliceStart, sliceLength]\n tokenMetadata[\"index\"] = tokens.length\n\n tokens.push(\n new lunr.Token (\n str.slice(sliceStart, sliceEnd),\n tokenMetadata\n )\n )\n }\n\n sliceStart = sliceEnd + 1\n }\n\n }\n\n return tokens\n}\n\n/**\n * The separator used to split a string into tokens. Override this property to change the behaviour of\n * `lunr.tokenizer` behaviour when tokenizing strings. By default this splits on whitespace and hyphens.\n *\n * @static\n * @see lunr.tokenizer\n */\nlunr.tokenizer.separator = /[\\s\\-]+/\n/*!\n * lunr.Pipeline\n * Copyright (C) 2020 Oliver Nightingale\n */\n\n/**\n * lunr.Pipelines maintain an ordered list of functions to be applied to all\n * tokens in documents entering the search index and queries being ran against\n * the index.\n *\n * An instance of lunr.Index created with the lunr shortcut will contain a\n * pipeline with a stop word filter and an English language stemmer. Extra\n * functions can be added before or after either of these functions or these\n * default functions can be removed.\n *\n * When run the pipeline will call each function in turn, passing a token, the\n * index of that token in the original list of all tokens and finally a list of\n * all the original tokens.\n *\n * The output of functions in the pipeline will be passed to the next function\n * in the pipeline. To exclude a token from entering the index the function\n * should return undefined, the rest of the pipeline will not be called with\n * this token.\n *\n * For serialisation of pipelines to work, all functions used in an instance of\n * a pipeline should be registered with lunr.Pipeline. Registered functions can\n * then be loaded. If trying to load a serialised pipeline that uses functions\n * that are not registered an error will be thrown.\n *\n * If not planning on serialising the pipeline then registering pipeline functions\n * is not necessary.\n *\n * @constructor\n */\nlunr.Pipeline = function () {\n this._stack = []\n}\n\nlunr.Pipeline.registeredFunctions = Object.create(null)\n\n/**\n * A pipeline function maps lunr.Token to lunr.Token. A lunr.Token contains the token\n * string as well as all known metadata. A pipeline function can mutate the token string\n * or mutate (or add) metadata for a given token.\n *\n * A pipeline function can indicate that the passed token should be discarded by returning\n * null, undefined or an empty string. This token will not be passed to any downstream pipeline\n * functions and will not be added to the index.\n *\n * Multiple tokens can be returned by returning an array of tokens. Each token will be passed\n * to any downstream pipeline functions and all will returned tokens will be added to the index.\n *\n * Any number of pipeline functions may be chained together using a lunr.Pipeline.\n *\n * @interface lunr.PipelineFunction\n * @param {lunr.Token} token - A token from the document being processed.\n * @param {number} i - The index of this token in the complete list of tokens for this document/field.\n * @param {lunr.Token[]} tokens - All tokens for this document/field.\n * @returns {(?lunr.Token|lunr.Token[])}\n */\n\n/**\n * Register a function with the pipeline.\n *\n * Functions that are used in the pipeline should be registered if the pipeline\n * needs to be serialised, or a serialised pipeline needs to be loaded.\n *\n * Registering a function does not add it to a pipeline, functions must still be\n * added to instances of the pipeline for them to be used when running a pipeline.\n *\n * @param {lunr.PipelineFunction} fn - The function to check for.\n * @param {String} label - The label to register this function with\n */\nlunr.Pipeline.registerFunction = function (fn, label) {\n if (label in this.registeredFunctions) {\n lunr.utils.warn('Overwriting existing registered function: ' + label)\n }\n\n fn.label = label\n lunr.Pipeline.registeredFunctions[fn.label] = fn\n}\n\n/**\n * Warns if the function is not registered as a Pipeline function.\n *\n * @param {lunr.PipelineFunction} fn - The function to check for.\n * @private\n */\nlunr.Pipeline.warnIfFunctionNotRegistered = function (fn) {\n var isRegistered = fn.label && (fn.label in this.registeredFunctions)\n\n if (!isRegistered) {\n lunr.utils.warn('Function is not registered with pipeline. This may cause problems when serialising the index.\\n', fn)\n }\n}\n\n/**\n * Loads a previously serialised pipeline.\n *\n * All functions to be loaded must already be registered with lunr.Pipeline.\n * If any function from the serialised data has not been registered then an\n * error will be thrown.\n *\n * @param {Object} serialised - The serialised pipeline to load.\n * @returns {lunr.Pipeline}\n */\nlunr.Pipeline.load = function (serialised) {\n var pipeline = new lunr.Pipeline\n\n serialised.forEach(function (fnName) {\n var fn = lunr.Pipeline.registeredFunctions[fnName]\n\n if (fn) {\n pipeline.add(fn)\n } else {\n throw new Error('Cannot load unregistered function: ' + fnName)\n }\n })\n\n return pipeline\n}\n\n/**\n * Adds new functions to the end of the pipeline.\n *\n * Logs a warning if the function has not been registered.\n *\n * @param {lunr.PipelineFunction[]} functions - Any number of functions to add to the pipeline.\n */\nlunr.Pipeline.prototype.add = function () {\n var fns = Array.prototype.slice.call(arguments)\n\n fns.forEach(function (fn) {\n lunr.Pipeline.warnIfFunctionNotRegistered(fn)\n this._stack.push(fn)\n }, this)\n}\n\n/**\n * Adds a single function after a function that already exists in the\n * pipeline.\n *\n * Logs a warning if the function has not been registered.\n *\n * @param {lunr.PipelineFunction} existingFn - A function that already exists in the pipeline.\n * @param {lunr.PipelineFunction} newFn - The new function to add to the pipeline.\n */\nlunr.Pipeline.prototype.after = function (existingFn, newFn) {\n lunr.Pipeline.warnIfFunctionNotRegistered(newFn)\n\n var pos = this._stack.indexOf(existingFn)\n if (pos == -1) {\n throw new Error('Cannot find existingFn')\n }\n\n pos = pos + 1\n this._stack.splice(pos, 0, newFn)\n}\n\n/**\n * Adds a single function before a function that already exists in the\n * pipeline.\n *\n * Logs a warning if the function has not been registered.\n *\n * @param {lunr.PipelineFunction} existingFn - A function that already exists in the pipeline.\n * @param {lunr.PipelineFunction} newFn - The new function to add to the pipeline.\n */\nlunr.Pipeline.prototype.before = function (existingFn, newFn) {\n lunr.Pipeline.warnIfFunctionNotRegistered(newFn)\n\n var pos = this._stack.indexOf(existingFn)\n if (pos == -1) {\n throw new Error('Cannot find existingFn')\n }\n\n this._stack.splice(pos, 0, newFn)\n}\n\n/**\n * Removes a function from the pipeline.\n *\n * @param {lunr.PipelineFunction} fn The function to remove from the pipeline.\n */\nlunr.Pipeline.prototype.remove = function (fn) {\n var pos = this._stack.indexOf(fn)\n if (pos == -1) {\n return\n }\n\n this._stack.splice(pos, 1)\n}\n\n/**\n * Runs the current list of functions that make up the pipeline against the\n * passed tokens.\n *\n * @param {Array} tokens The tokens to run through the pipeline.\n * @returns {Array}\n */\nlunr.Pipeline.prototype.run = function (tokens) {\n var stackLength = this._stack.length\n\n for (var i = 0; i < stackLength; i++) {\n var fn = this._stack[i]\n var memo = []\n\n for (var j = 0; j < tokens.length; j++) {\n var result = fn(tokens[j], j, tokens)\n\n if (result === null || result === void 0 || result === '') continue\n\n if (Array.isArray(result)) {\n for (var k = 0; k < result.length; k++) {\n memo.push(result[k])\n }\n } else {\n memo.push(result)\n }\n }\n\n tokens = memo\n }\n\n return tokens\n}\n\n/**\n * Convenience method for passing a string through a pipeline and getting\n * strings out. This method takes care of wrapping the passed string in a\n * token and mapping the resulting tokens back to strings.\n *\n * @param {string} str - The string to pass through the pipeline.\n * @param {?object} metadata - Optional metadata to associate with the token\n * passed to the pipeline.\n * @returns {string[]}\n */\nlunr.Pipeline.prototype.runString = function (str, metadata) {\n var token = new lunr.Token (str, metadata)\n\n return this.run([token]).map(function (t) {\n return t.toString()\n })\n}\n\n/**\n * Resets the pipeline by removing any existing processors.\n *\n */\nlunr.Pipeline.prototype.reset = function () {\n this._stack = []\n}\n\n/**\n * Returns a representation of the pipeline ready for serialisation.\n *\n * Logs a warning if the function has not been registered.\n *\n * @returns {Array}\n */\nlunr.Pipeline.prototype.toJSON = function () {\n return this._stack.map(function (fn) {\n lunr.Pipeline.warnIfFunctionNotRegistered(fn)\n\n return fn.label\n })\n}\n/*!\n * lunr.Vector\n * Copyright (C) 2020 Oliver Nightingale\n */\n\n/**\n * A vector is used to construct the vector space of documents and queries. These\n * vectors support operations to determine the similarity between two documents or\n * a document and a query.\n *\n * Normally no parameters are required for initializing a vector, but in the case of\n * loading a previously dumped vector the raw elements can be provided to the constructor.\n *\n * For performance reasons vectors are implemented with a flat array, where an elements\n * index is immediately followed by its value. E.g. [index, value, index, value]. This\n * allows the underlying array to be as sparse as possible and still offer decent\n * performance when being used for vector calculations.\n *\n * @constructor\n * @param {Number[]} [elements] - The flat list of element index and element value pairs.\n */\nlunr.Vector = function (elements) {\n this._magnitude = 0\n this.elements = elements || []\n}\n\n\n/**\n * Calculates the position within the vector to insert a given index.\n *\n * This is used internally by insert and upsert. If there are duplicate indexes then\n * the position is returned as if the value for that index were to be updated, but it\n * is the callers responsibility to check whether there is a duplicate at that index\n *\n * @param {Number} insertIdx - The index at which the element should be inserted.\n * @returns {Number}\n */\nlunr.Vector.prototype.positionForIndex = function (index) {\n // For an empty vector the tuple can be inserted at the beginning\n if (this.elements.length == 0) {\n return 0\n }\n\n var start = 0,\n end = this.elements.length / 2,\n sliceLength = end - start,\n pivotPoint = Math.floor(sliceLength / 2),\n pivotIndex = this.elements[pivotPoint * 2]\n\n while (sliceLength > 1) {\n if (pivotIndex < index) {\n start = pivotPoint\n }\n\n if (pivotIndex > index) {\n end = pivotPoint\n }\n\n if (pivotIndex == index) {\n break\n }\n\n sliceLength = end - start\n pivotPoint = start + Math.floor(sliceLength / 2)\n pivotIndex = this.elements[pivotPoint * 2]\n }\n\n if (pivotIndex == index) {\n return pivotPoint * 2\n }\n\n if (pivotIndex > index) {\n return pivotPoint * 2\n }\n\n if (pivotIndex < index) {\n return (pivotPoint + 1) * 2\n }\n}\n\n/**\n * Inserts an element at an index within the vector.\n *\n * Does not allow duplicates, will throw an error if there is already an entry\n * for this index.\n *\n * @param {Number} insertIdx - The index at which the element should be inserted.\n * @param {Number} val - The value to be inserted into the vector.\n */\nlunr.Vector.prototype.insert = function (insertIdx, val) {\n this.upsert(insertIdx, val, function () {\n throw \"duplicate index\"\n })\n}\n\n/**\n * Inserts or updates an existing index within the vector.\n *\n * @param {Number} insertIdx - The index at which the element should be inserted.\n * @param {Number} val - The value to be inserted into the vector.\n * @param {function} fn - A function that is called for updates, the existing value and the\n * requested value are passed as arguments\n */\nlunr.Vector.prototype.upsert = function (insertIdx, val, fn) {\n this._magnitude = 0\n var position = this.positionForIndex(insertIdx)\n\n if (this.elements[position] == insertIdx) {\n this.elements[position + 1] = fn(this.elements[position + 1], val)\n } else {\n this.elements.splice(position, 0, insertIdx, val)\n }\n}\n\n/**\n * Calculates the magnitude of this vector.\n *\n * @returns {Number}\n */\nlunr.Vector.prototype.magnitude = function () {\n if (this._magnitude) return this._magnitude\n\n var sumOfSquares = 0,\n elementsLength = this.elements.length\n\n for (var i = 1; i < elementsLength; i += 2) {\n var val = this.elements[i]\n sumOfSquares += val * val\n }\n\n return this._magnitude = Math.sqrt(sumOfSquares)\n}\n\n/**\n * Calculates the dot product of this vector and another vector.\n *\n * @param {lunr.Vector} otherVector - The vector to compute the dot product with.\n * @returns {Number}\n */\nlunr.Vector.prototype.dot = function (otherVector) {\n var dotProduct = 0,\n a = this.elements, b = otherVector.elements,\n aLen = a.length, bLen = b.length,\n aVal = 0, bVal = 0,\n i = 0, j = 0\n\n while (i < aLen && j < bLen) {\n aVal = a[i], bVal = b[j]\n if (aVal < bVal) {\n i += 2\n } else if (aVal > bVal) {\n j += 2\n } else if (aVal == bVal) {\n dotProduct += a[i + 1] * b[j + 1]\n i += 2\n j += 2\n }\n }\n\n return dotProduct\n}\n\n/**\n * Calculates the similarity between this vector and another vector.\n *\n * @param {lunr.Vector} otherVector - The other vector to calculate the\n * similarity with.\n * @returns {Number}\n */\nlunr.Vector.prototype.similarity = function (otherVector) {\n return this.dot(otherVector) / this.magnitude() || 0\n}\n\n/**\n * Converts the vector to an array of the elements within the vector.\n *\n * @returns {Number[]}\n */\nlunr.Vector.prototype.toArray = function () {\n var output = new Array (this.elements.length / 2)\n\n for (var i = 1, j = 0; i < this.elements.length; i += 2, j++) {\n output[j] = this.elements[i]\n }\n\n return output\n}\n\n/**\n * A JSON serializable representation of the vector.\n *\n * @returns {Number[]}\n */\nlunr.Vector.prototype.toJSON = function () {\n return this.elements\n}\n/* eslint-disable */\n/*!\n * lunr.stemmer\n * Copyright (C) 2020 Oliver Nightingale\n * Includes code from - http://tartarus.org/~martin/PorterStemmer/js.txt\n */\n\n/**\n * lunr.stemmer is an english language stemmer, this is a JavaScript\n * implementation of the PorterStemmer taken from http://tartarus.org/~martin\n *\n * @static\n * @implements {lunr.PipelineFunction}\n * @param {lunr.Token} token - The string to stem\n * @returns {lunr.Token}\n * @see {@link lunr.Pipeline}\n * @function\n */\nlunr.stemmer = (function(){\n var step2list = {\n \"ational\" : \"ate\",\n \"tional\" : \"tion\",\n \"enci\" : \"ence\",\n \"anci\" : \"ance\",\n \"izer\" : \"ize\",\n \"bli\" : \"ble\",\n \"alli\" : \"al\",\n \"entli\" : \"ent\",\n \"eli\" : \"e\",\n \"ousli\" : \"ous\",\n \"ization\" : \"ize\",\n \"ation\" : \"ate\",\n \"ator\" : \"ate\",\n \"alism\" : \"al\",\n \"iveness\" : \"ive\",\n \"fulness\" : \"ful\",\n \"ousness\" : \"ous\",\n \"aliti\" : \"al\",\n \"iviti\" : \"ive\",\n \"biliti\" : \"ble\",\n \"logi\" : \"log\"\n },\n\n step3list = {\n \"icate\" : \"ic\",\n \"ative\" : \"\",\n \"alize\" : \"al\",\n \"iciti\" : \"ic\",\n \"ical\" : \"ic\",\n \"ful\" : \"\",\n \"ness\" : \"\"\n },\n\n c = \"[^aeiou]\", // consonant\n v = \"[aeiouy]\", // vowel\n C = c + \"[^aeiouy]*\", // consonant sequence\n V = v + \"[aeiou]*\", // vowel sequence\n\n mgr0 = \"^(\" + C + \")?\" + V + C, // [C]VC... is m>0\n meq1 = \"^(\" + C + \")?\" + V + C + \"(\" + V + \")?$\", // [C]VC[V] is m=1\n mgr1 = \"^(\" + C + \")?\" + V + C + V + C, // [C]VCVC... is m>1\n s_v = \"^(\" + C + \")?\" + v; // vowel in stem\n\n var re_mgr0 = new RegExp(mgr0);\n var re_mgr1 = new RegExp(mgr1);\n var re_meq1 = new RegExp(meq1);\n var re_s_v = new RegExp(s_v);\n\n var re_1a = /^(.+?)(ss|i)es$/;\n var re2_1a = /^(.+?)([^s])s$/;\n var re_1b = /^(.+?)eed$/;\n var re2_1b = /^(.+?)(ed|ing)$/;\n var re_1b_2 = /.$/;\n var re2_1b_2 = /(at|bl|iz)$/;\n var re3_1b_2 = new RegExp(\"([^aeiouylsz])\\\\1$\");\n var re4_1b_2 = new RegExp(\"^\" + C + v + \"[^aeiouwxy]$\");\n\n var re_1c = /^(.+?[^aeiou])y$/;\n var re_2 = /^(.+?)(ational|tional|enci|anci|izer|bli|alli|entli|eli|ousli|ization|ation|ator|alism|iveness|fulness|ousness|aliti|iviti|biliti|logi)$/;\n\n var re_3 = /^(.+?)(icate|ative|alize|iciti|ical|ful|ness)$/;\n\n var re_4 = /^(.+?)(al|ance|ence|er|ic|able|ible|ant|ement|ment|ent|ou|ism|ate|iti|ous|ive|ize)$/;\n var re2_4 = /^(.+?)(s|t)(ion)$/;\n\n var re_5 = /^(.+?)e$/;\n var re_5_1 = /ll$/;\n var re3_5 = new RegExp(\"^\" + C + v + \"[^aeiouwxy]$\");\n\n var porterStemmer = function porterStemmer(w) {\n var stem,\n suffix,\n firstch,\n re,\n re2,\n re3,\n re4;\n\n if (w.length < 3) { return w; }\n\n firstch = w.substr(0,1);\n if (firstch == \"y\") {\n w = firstch.toUpperCase() + w.substr(1);\n }\n\n // Step 1a\n re = re_1a\n re2 = re2_1a;\n\n if (re.test(w)) { w = w.replace(re,\"$1$2\"); }\n else if (re2.test(w)) { w = w.replace(re2,\"$1$2\"); }\n\n // Step 1b\n re = re_1b;\n re2 = re2_1b;\n if (re.test(w)) {\n var fp = re.exec(w);\n re = re_mgr0;\n if (re.test(fp[1])) {\n re = re_1b_2;\n w = w.replace(re,\"\");\n }\n } else if (re2.test(w)) {\n var fp = re2.exec(w);\n stem = fp[1];\n re2 = re_s_v;\n if (re2.test(stem)) {\n w = stem;\n re2 = re2_1b_2;\n re3 = re3_1b_2;\n re4 = re4_1b_2;\n if (re2.test(w)) { w = w + \"e\"; }\n else if (re3.test(w)) { re = re_1b_2; w = w.replace(re,\"\"); }\n else if (re4.test(w)) { w = w + \"e\"; }\n }\n }\n\n // Step 1c - replace suffix y or Y by i if preceded by a non-vowel which is not the first letter of the word (so cry -> cri, by -> by, say -> say)\n re = re_1c;\n if (re.test(w)) {\n var fp = re.exec(w);\n stem = fp[1];\n w = stem + \"i\";\n }\n\n // Step 2\n re = re_2;\n if (re.test(w)) {\n var fp = re.exec(w);\n stem = fp[1];\n suffix = fp[2];\n re = re_mgr0;\n if (re.test(stem)) {\n w = stem + step2list[suffix];\n }\n }\n\n // Step 3\n re = re_3;\n if (re.test(w)) {\n var fp = re.exec(w);\n stem = fp[1];\n suffix = fp[2];\n re = re_mgr0;\n if (re.test(stem)) {\n w = stem + step3list[suffix];\n }\n }\n\n // Step 4\n re = re_4;\n re2 = re2_4;\n if (re.test(w)) {\n var fp = re.exec(w);\n stem = fp[1];\n re = re_mgr1;\n if (re.test(stem)) {\n w = stem;\n }\n } else if (re2.test(w)) {\n var fp = re2.exec(w);\n stem = fp[1] + fp[2];\n re2 = re_mgr1;\n if (re2.test(stem)) {\n w = stem;\n }\n }\n\n // Step 5\n re = re_5;\n if (re.test(w)) {\n var fp = re.exec(w);\n stem = fp[1];\n re = re_mgr1;\n re2 = re_meq1;\n re3 = re3_5;\n if (re.test(stem) || (re2.test(stem) && !(re3.test(stem)))) {\n w = stem;\n }\n }\n\n re = re_5_1;\n re2 = re_mgr1;\n if (re.test(w) && re2.test(w)) {\n re = re_1b_2;\n w = w.replace(re,\"\");\n }\n\n // and turn initial Y back to y\n\n if (firstch == \"y\") {\n w = firstch.toLowerCase() + w.substr(1);\n }\n\n return w;\n };\n\n return function (token) {\n return token.update(porterStemmer);\n }\n})();\n\nlunr.Pipeline.registerFunction(lunr.stemmer, 'stemmer')\n/*!\n * lunr.stopWordFilter\n * Copyright (C) 2020 Oliver Nightingale\n */\n\n/**\n * lunr.generateStopWordFilter builds a stopWordFilter function from the provided\n * list of stop words.\n *\n * The built in lunr.stopWordFilter is built using this generator and can be used\n * to generate custom stopWordFilters for applications or non English languages.\n *\n * @function\n * @param {Array} token The token to pass through the filter\n * @returns {lunr.PipelineFunction}\n * @see lunr.Pipeline\n * @see lunr.stopWordFilter\n */\nlunr.generateStopWordFilter = function (stopWords) {\n var words = stopWords.reduce(function (memo, stopWord) {\n memo[stopWord] = stopWord\n return memo\n }, {})\n\n return function (token) {\n if (token && words[token.toString()] !== token.toString()) return token\n }\n}\n\n/**\n * lunr.stopWordFilter is an English language stop word list filter, any words\n * contained in the list will not be passed through the filter.\n *\n * This is intended to be used in the Pipeline. If the token does not pass the\n * filter then undefined will be returned.\n *\n * @function\n * @implements {lunr.PipelineFunction}\n * @params {lunr.Token} token - A token to check for being a stop word.\n * @returns {lunr.Token}\n * @see {@link lunr.Pipeline}\n */\nlunr.stopWordFilter = lunr.generateStopWordFilter([\n 'a',\n 'able',\n 'about',\n 'across',\n 'after',\n 'all',\n 'almost',\n 'also',\n 'am',\n 'among',\n 'an',\n 'and',\n 'any',\n 'are',\n 'as',\n 'at',\n 'be',\n 'because',\n 'been',\n 'but',\n 'by',\n 'can',\n 'cannot',\n 'could',\n 'dear',\n 'did',\n 'do',\n 'does',\n 'either',\n 'else',\n 'ever',\n 'every',\n 'for',\n 'from',\n 'get',\n 'got',\n 'had',\n 'has',\n 'have',\n 'he',\n 'her',\n 'hers',\n 'him',\n 'his',\n 'how',\n 'however',\n 'i',\n 'if',\n 'in',\n 'into',\n 'is',\n 'it',\n 'its',\n 'just',\n 'least',\n 'let',\n 'like',\n 'likely',\n 'may',\n 'me',\n 'might',\n 'most',\n 'must',\n 'my',\n 'neither',\n 'no',\n 'nor',\n 'not',\n 'of',\n 'off',\n 'often',\n 'on',\n 'only',\n 'or',\n 'other',\n 'our',\n 'own',\n 'rather',\n 'said',\n 'say',\n 'says',\n 'she',\n 'should',\n 'since',\n 'so',\n 'some',\n 'than',\n 'that',\n 'the',\n 'their',\n 'them',\n 'then',\n 'there',\n 'these',\n 'they',\n 'this',\n 'tis',\n 'to',\n 'too',\n 'twas',\n 'us',\n 'wants',\n 'was',\n 'we',\n 'were',\n 'what',\n 'when',\n 'where',\n 'which',\n 'while',\n 'who',\n 'whom',\n 'why',\n 'will',\n 'with',\n 'would',\n 'yet',\n 'you',\n 'your'\n])\n\nlunr.Pipeline.registerFunction(lunr.stopWordFilter, 'stopWordFilter')\n/*!\n * lunr.trimmer\n * Copyright (C) 2020 Oliver Nightingale\n */\n\n/**\n * lunr.trimmer is a pipeline function for trimming non word\n * characters from the beginning and end of tokens before they\n * enter the index.\n *\n * This implementation may not work correctly for non latin\n * characters and should either be removed or adapted for use\n * with languages with non-latin characters.\n *\n * @static\n * @implements {lunr.PipelineFunction}\n * @param {lunr.Token} token The token to pass through the filter\n * @returns {lunr.Token}\n * @see lunr.Pipeline\n */\nlunr.trimmer = function (token) {\n return token.update(function (s) {\n return s.replace(/^\\W+/, '').replace(/\\W+$/, '')\n })\n}\n\nlunr.Pipeline.registerFunction(lunr.trimmer, 'trimmer')\n/*!\n * lunr.TokenSet\n * Copyright (C) 2020 Oliver Nightingale\n */\n\n/**\n * A token set is used to store the unique list of all tokens\n * within an index. Token sets are also used to represent an\n * incoming query to the index, this query token set and index\n * token set are then intersected to find which tokens to look\n * up in the inverted index.\n *\n * A token set can hold multiple tokens, as in the case of the\n * index token set, or it can hold a single token as in the\n * case of a simple query token set.\n *\n * Additionally token sets are used to perform wildcard matching.\n * Leading, contained and trailing wildcards are supported, and\n * from this edit distance matching can also be provided.\n *\n * Token sets are implemented as a minimal finite state automata,\n * where both common prefixes and suffixes are shared between tokens.\n * This helps to reduce the space used for storing the token set.\n *\n * @constructor\n */\nlunr.TokenSet = function () {\n this.final = false\n this.edges = {}\n this.id = lunr.TokenSet._nextId\n lunr.TokenSet._nextId += 1\n}\n\n/**\n * Keeps track of the next, auto increment, identifier to assign\n * to a new tokenSet.\n *\n * TokenSets require a unique identifier to be correctly minimised.\n *\n * @private\n */\nlunr.TokenSet._nextId = 1\n\n/**\n * Creates a TokenSet instance from the given sorted array of words.\n *\n * @param {String[]} arr - A sorted array of strings to create the set from.\n * @returns {lunr.TokenSet}\n * @throws Will throw an error if the input array is not sorted.\n */\nlunr.TokenSet.fromArray = function (arr) {\n var builder = new lunr.TokenSet.Builder\n\n for (var i = 0, len = arr.length; i < len; i++) {\n builder.insert(arr[i])\n }\n\n builder.finish()\n return builder.root\n}\n\n/**\n * Creates a token set from a query clause.\n *\n * @private\n * @param {Object} clause - A single clause from lunr.Query.\n * @param {string} clause.term - The query clause term.\n * @param {number} [clause.editDistance] - The optional edit distance for the term.\n * @returns {lunr.TokenSet}\n */\nlunr.TokenSet.fromClause = function (clause) {\n if ('editDistance' in clause) {\n return lunr.TokenSet.fromFuzzyString(clause.term, clause.editDistance)\n } else {\n return lunr.TokenSet.fromString(clause.term)\n }\n}\n\n/**\n * Creates a token set representing a single string with a specified\n * edit distance.\n *\n * Insertions, deletions, substitutions and transpositions are each\n * treated as an edit distance of 1.\n *\n * Increasing the allowed edit distance will have a dramatic impact\n * on the performance of both creating and intersecting these TokenSets.\n * It is advised to keep the edit distance less than 3.\n *\n * @param {string} str - The string to create the token set from.\n * @param {number} editDistance - The allowed edit distance to match.\n * @returns {lunr.Vector}\n */\nlunr.TokenSet.fromFuzzyString = function (str, editDistance) {\n var root = new lunr.TokenSet\n\n var stack = [{\n node: root,\n editsRemaining: editDistance,\n str: str\n }]\n\n while (stack.length) {\n var frame = stack.pop()\n\n // no edit\n if (frame.str.length > 0) {\n var char = frame.str.charAt(0),\n noEditNode\n\n if (char in frame.node.edges) {\n noEditNode = frame.node.edges[char]\n } else {\n noEditNode = new lunr.TokenSet\n frame.node.edges[char] = noEditNode\n }\n\n if (frame.str.length == 1) {\n noEditNode.final = true\n }\n\n stack.push({\n node: noEditNode,\n editsRemaining: frame.editsRemaining,\n str: frame.str.slice(1)\n })\n }\n\n if (frame.editsRemaining == 0) {\n continue\n }\n\n // insertion\n if (\"*\" in frame.node.edges) {\n var insertionNode = frame.node.edges[\"*\"]\n } else {\n var insertionNode = new lunr.TokenSet\n frame.node.edges[\"*\"] = insertionNode\n }\n\n if (frame.str.length == 0) {\n insertionNode.final = true\n }\n\n stack.push({\n node: insertionNode,\n editsRemaining: frame.editsRemaining - 1,\n str: frame.str\n })\n\n // deletion\n // can only do a deletion if we have enough edits remaining\n // and if there are characters left to delete in the string\n if (frame.str.length > 1) {\n stack.push({\n node: frame.node,\n editsRemaining: frame.editsRemaining - 1,\n str: frame.str.slice(1)\n })\n }\n\n // deletion\n // just removing the last character from the str\n if (frame.str.length == 1) {\n frame.node.final = true\n }\n\n // substitution\n // can only do a substitution if we have enough edits remaining\n // and if there are characters left to substitute\n if (frame.str.length >= 1) {\n if (\"*\" in frame.node.edges) {\n var substitutionNode = frame.node.edges[\"*\"]\n } else {\n var substitutionNode = new lunr.TokenSet\n frame.node.edges[\"*\"] = substitutionNode\n }\n\n if (frame.str.length == 1) {\n substitutionNode.final = true\n }\n\n stack.push({\n node: substitutionNode,\n editsRemaining: frame.editsRemaining - 1,\n str: frame.str.slice(1)\n })\n }\n\n // transposition\n // can only do a transposition if there are edits remaining\n // and there are enough characters to transpose\n if (frame.str.length > 1) {\n var charA = frame.str.charAt(0),\n charB = frame.str.charAt(1),\n transposeNode\n\n if (charB in frame.node.edges) {\n transposeNode = frame.node.edges[charB]\n } else {\n transposeNode = new lunr.TokenSet\n frame.node.edges[charB] = transposeNode\n }\n\n if (frame.str.length == 1) {\n transposeNode.final = true\n }\n\n stack.push({\n node: transposeNode,\n editsRemaining: frame.editsRemaining - 1,\n str: charA + frame.str.slice(2)\n })\n }\n }\n\n return root\n}\n\n/**\n * Creates a TokenSet from a string.\n *\n * The string may contain one or more wildcard characters (*)\n * that will allow wildcard matching when intersecting with\n * another TokenSet.\n *\n * @param {string} str - The string to create a TokenSet from.\n * @returns {lunr.TokenSet}\n */\nlunr.TokenSet.fromString = function (str) {\n var node = new lunr.TokenSet,\n root = node\n\n /*\n * Iterates through all characters within the passed string\n * appending a node for each character.\n *\n * When a wildcard character is found then a self\n * referencing edge is introduced to continually match\n * any number of any characters.\n */\n for (var i = 0, len = str.length; i < len; i++) {\n var char = str[i],\n final = (i == len - 1)\n\n if (char == \"*\") {\n node.edges[char] = node\n node.final = final\n\n } else {\n var next = new lunr.TokenSet\n next.final = final\n\n node.edges[char] = next\n node = next\n }\n }\n\n return root\n}\n\n/**\n * Converts this TokenSet into an array of strings\n * contained within the TokenSet.\n *\n * This is not intended to be used on a TokenSet that\n * contains wildcards, in these cases the results are\n * undefined and are likely to cause an infinite loop.\n *\n * @returns {string[]}\n */\nlunr.TokenSet.prototype.toArray = function () {\n var words = []\n\n var stack = [{\n prefix: \"\",\n node: this\n }]\n\n while (stack.length) {\n var frame = stack.pop(),\n edges = Object.keys(frame.node.edges),\n len = edges.length\n\n if (frame.node.final) {\n /* In Safari, at this point the prefix is sometimes corrupted, see:\n * https://github.com/olivernn/lunr.js/issues/279 Calling any\n * String.prototype method forces Safari to \"cast\" this string to what\n * it's supposed to be, fixing the bug. */\n frame.prefix.charAt(0)\n words.push(frame.prefix)\n }\n\n for (var i = 0; i < len; i++) {\n var edge = edges[i]\n\n stack.push({\n prefix: frame.prefix.concat(edge),\n node: frame.node.edges[edge]\n })\n }\n }\n\n return words\n}\n\n/**\n * Generates a string representation of a TokenSet.\n *\n * This is intended to allow TokenSets to be used as keys\n * in objects, largely to aid the construction and minimisation\n * of a TokenSet. As such it is not designed to be a human\n * friendly representation of the TokenSet.\n *\n * @returns {string}\n */\nlunr.TokenSet.prototype.toString = function () {\n // NOTE: Using Object.keys here as this.edges is very likely\n // to enter 'hash-mode' with many keys being added\n //\n // avoiding a for-in loop here as it leads to the function\n // being de-optimised (at least in V8). From some simple\n // benchmarks the performance is comparable, but allowing\n // V8 to optimize may mean easy performance wins in the future.\n\n if (this._str) {\n return this._str\n }\n\n var str = this.final ? '1' : '0',\n labels = Object.keys(this.edges).sort(),\n len = labels.length\n\n for (var i = 0; i < len; i++) {\n var label = labels[i],\n node = this.edges[label]\n\n str = str + label + node.id\n }\n\n return str\n}\n\n/**\n * Returns a new TokenSet that is the intersection of\n * this TokenSet and the passed TokenSet.\n *\n * This intersection will take into account any wildcards\n * contained within the TokenSet.\n *\n * @param {lunr.TokenSet} b - An other TokenSet to intersect with.\n * @returns {lunr.TokenSet}\n */\nlunr.TokenSet.prototype.intersect = function (b) {\n var output = new lunr.TokenSet,\n frame = undefined\n\n var stack = [{\n qNode: b,\n output: output,\n node: this\n }]\n\n while (stack.length) {\n frame = stack.pop()\n\n // NOTE: As with the #toString method, we are using\n // Object.keys and a for loop instead of a for-in loop\n // as both of these objects enter 'hash' mode, causing\n // the function to be de-optimised in V8\n var qEdges = Object.keys(frame.qNode.edges),\n qLen = qEdges.length,\n nEdges = Object.keys(frame.node.edges),\n nLen = nEdges.length\n\n for (var q = 0; q < qLen; q++) {\n var qEdge = qEdges[q]\n\n for (var n = 0; n < nLen; n++) {\n var nEdge = nEdges[n]\n\n if (nEdge == qEdge || qEdge == '*') {\n var node = frame.node.edges[nEdge],\n qNode = frame.qNode.edges[qEdge],\n final = node.final && qNode.final,\n next = undefined\n\n if (nEdge in frame.output.edges) {\n // an edge already exists for this character\n // no need to create a new node, just set the finality\n // bit unless this node is already final\n next = frame.output.edges[nEdge]\n next.final = next.final || final\n\n } else {\n // no edge exists yet, must create one\n // set the finality bit and insert it\n // into the output\n next = new lunr.TokenSet\n next.final = final\n frame.output.edges[nEdge] = next\n }\n\n stack.push({\n qNode: qNode,\n output: next,\n node: node\n })\n }\n }\n }\n }\n\n return output\n}\nlunr.TokenSet.Builder = function () {\n this.previousWord = \"\"\n this.root = new lunr.TokenSet\n this.uncheckedNodes = []\n this.minimizedNodes = {}\n}\n\nlunr.TokenSet.Builder.prototype.insert = function (word) {\n var node,\n commonPrefix = 0\n\n if (word < this.previousWord) {\n throw new Error (\"Out of order word insertion\")\n }\n\n for (var i = 0; i < word.length && i < this.previousWord.length; i++) {\n if (word[i] != this.previousWord[i]) break\n commonPrefix++\n }\n\n this.minimize(commonPrefix)\n\n if (this.uncheckedNodes.length == 0) {\n node = this.root\n } else {\n node = this.uncheckedNodes[this.uncheckedNodes.length - 1].child\n }\n\n for (var i = commonPrefix; i < word.length; i++) {\n var nextNode = new lunr.TokenSet,\n char = word[i]\n\n node.edges[char] = nextNode\n\n this.uncheckedNodes.push({\n parent: node,\n char: char,\n child: nextNode\n })\n\n node = nextNode\n }\n\n node.final = true\n this.previousWord = word\n}\n\nlunr.TokenSet.Builder.prototype.finish = function () {\n this.minimize(0)\n}\n\nlunr.TokenSet.Builder.prototype.minimize = function (downTo) {\n for (var i = this.uncheckedNodes.length - 1; i >= downTo; i--) {\n var node = this.uncheckedNodes[i],\n childKey = node.child.toString()\n\n if (childKey in this.minimizedNodes) {\n node.parent.edges[node.char] = this.minimizedNodes[childKey]\n } else {\n // Cache the key for this node since\n // we know it can't change anymore\n node.child._str = childKey\n\n this.minimizedNodes[childKey] = node.child\n }\n\n this.uncheckedNodes.pop()\n }\n}\n/*!\n * lunr.Index\n * Copyright (C) 2020 Oliver Nightingale\n */\n\n/**\n * An index contains the built index of all documents and provides a query interface\n * to the index.\n *\n * Usually instances of lunr.Index will not be created using this constructor, instead\n * lunr.Builder should be used to construct new indexes, or lunr.Index.load should be\n * used to load previously built and serialized indexes.\n *\n * @constructor\n * @param {Object} attrs - The attributes of the built search index.\n * @param {Object} attrs.invertedIndex - An index of term/field to document reference.\n * @param {Object} attrs.fieldVectors - Field vectors\n * @param {lunr.TokenSet} attrs.tokenSet - An set of all corpus tokens.\n * @param {string[]} attrs.fields - The names of indexed document fields.\n * @param {lunr.Pipeline} attrs.pipeline - The pipeline to use for search terms.\n */\nlunr.Index = function (attrs) {\n this.invertedIndex = attrs.invertedIndex\n this.fieldVectors = attrs.fieldVectors\n this.tokenSet = attrs.tokenSet\n this.fields = attrs.fields\n this.pipeline = attrs.pipeline\n}\n\n/**\n * A result contains details of a document matching a search query.\n * @typedef {Object} lunr.Index~Result\n * @property {string} ref - The reference of the document this result represents.\n * @property {number} score - A number between 0 and 1 representing how similar this document is to the query.\n * @property {lunr.MatchData} matchData - Contains metadata about this match including which term(s) caused the match.\n */\n\n/**\n * Although lunr provides the ability to create queries using lunr.Query, it also provides a simple\n * query language which itself is parsed into an instance of lunr.Query.\n *\n * For programmatically building queries it is advised to directly use lunr.Query, the query language\n * is best used for human entered text rather than program generated text.\n *\n * At its simplest queries can just be a single term, e.g. `hello`, multiple terms are also supported\n * and will be combined with OR, e.g `hello world` will match documents that contain either 'hello'\n * or 'world', though those that contain both will rank higher in the results.\n *\n * Wildcards can be included in terms to match one or more unspecified characters, these wildcards can\n * be inserted anywhere within the term, and more than one wildcard can exist in a single term. Adding\n * wildcards will increase the number of documents that will be found but can also have a negative\n * impact on query performance, especially with wildcards at the beginning of a term.\n *\n * Terms can be restricted to specific fields, e.g. `title:hello`, only documents with the term\n * hello in the title field will match this query. Using a field not present in the index will lead\n * to an error being thrown.\n *\n * Modifiers can also be added to terms, lunr supports edit distance and boost modifiers on terms. A term\n * boost will make documents matching that term score higher, e.g. `foo^5`. Edit distance is also supported\n * to provide fuzzy matching, e.g. 'hello~2' will match documents with hello with an edit distance of 2.\n * Avoid large values for edit distance to improve query performance.\n *\n * Each term also supports a presence modifier. By default a term's presence in document is optional, however\n * this can be changed to either required or prohibited. For a term's presence to be required in a document the\n * term should be prefixed with a '+', e.g. `+foo bar` is a search for documents that must contain 'foo' and\n * optionally contain 'bar'. Conversely a leading '-' sets the terms presence to prohibited, i.e. it must not\n * appear in a document, e.g. `-foo bar` is a search for documents that do not contain 'foo' but may contain 'bar'.\n *\n * To escape special characters the backslash character '\\' can be used, this allows searches to include\n * characters that would normally be considered modifiers, e.g. `foo\\~2` will search for a term \"foo~2\" instead\n * of attempting to apply a boost of 2 to the search term \"foo\".\n *\n * @typedef {string} lunr.Index~QueryString\n * @example Simple single term query\n * hello\n * @example Multiple term query\n * hello world\n * @example term scoped to a field\n * title:hello\n * @example term with a boost of 10\n * hello^10\n * @example term with an edit distance of 2\n * hello~2\n * @example terms with presence modifiers\n * -foo +bar baz\n */\n\n/**\n * Performs a search against the index using lunr query syntax.\n *\n * Results will be returned sorted by their score, the most relevant results\n * will be returned first. For details on how the score is calculated, please see\n * the {@link https://lunrjs.com/guides/searching.html#scoring|guide}.\n *\n * For more programmatic querying use lunr.Index#query.\n *\n * @param {lunr.Index~QueryString} queryString - A string containing a lunr query.\n * @throws {lunr.QueryParseError} If the passed query string cannot be parsed.\n * @returns {lunr.Index~Result[]}\n */\nlunr.Index.prototype.search = function (queryString) {\n return this.query(function (query) {\n var parser = new lunr.QueryParser(queryString, query)\n parser.parse()\n })\n}\n\n/**\n * A query builder callback provides a query object to be used to express\n * the query to perform on the index.\n *\n * @callback lunr.Index~queryBuilder\n * @param {lunr.Query} query - The query object to build up.\n * @this lunr.Query\n */\n\n/**\n * Performs a query against the index using the yielded lunr.Query object.\n *\n * If performing programmatic queries against the index, this method is preferred\n * over lunr.Index#search so as to avoid the additional query parsing overhead.\n *\n * A query object is yielded to the supplied function which should be used to\n * express the query to be run against the index.\n *\n * Note that although this function takes a callback parameter it is _not_ an\n * asynchronous operation, the callback is just yielded a query object to be\n * customized.\n *\n * @param {lunr.Index~queryBuilder} fn - A function that is used to build the query.\n * @returns {lunr.Index~Result[]}\n */\nlunr.Index.prototype.query = function (fn) {\n // for each query clause\n // * process terms\n // * expand terms from token set\n // * find matching documents and metadata\n // * get document vectors\n // * score documents\n\n var query = new lunr.Query(this.fields),\n matchingFields = Object.create(null),\n queryVectors = Object.create(null),\n termFieldCache = Object.create(null),\n requiredMatches = Object.create(null),\n prohibitedMatches = Object.create(null)\n\n /*\n * To support field level boosts a query vector is created per\n * field. An empty vector is eagerly created to support negated\n * queries.\n */\n for (var i = 0; i < this.fields.length; i++) {\n queryVectors[this.fields[i]] = new lunr.Vector\n }\n\n fn.call(query, query)\n\n for (var i = 0; i < query.clauses.length; i++) {\n /*\n * Unless the pipeline has been disabled for this term, which is\n * the case for terms with wildcards, we need to pass the clause\n * term through the search pipeline. A pipeline returns an array\n * of processed terms. Pipeline functions may expand the passed\n * term, which means we may end up performing multiple index lookups\n * for a single query term.\n */\n var clause = query.clauses[i],\n terms = null,\n clauseMatches = lunr.Set.empty\n\n if (clause.usePipeline) {\n terms = this.pipeline.runString(clause.term, {\n fields: clause.fields\n })\n } else {\n terms = [clause.term]\n }\n\n for (var m = 0; m < terms.length; m++) {\n var term = terms[m]\n\n /*\n * Each term returned from the pipeline needs to use the same query\n * clause object, e.g. the same boost and or edit distance. The\n * simplest way to do this is to re-use the clause object but mutate\n * its term property.\n */\n clause.term = term\n\n /*\n * From the term in the clause we create a token set which will then\n * be used to intersect the indexes token set to get a list of terms\n * to lookup in the inverted index\n */\n var termTokenSet = lunr.TokenSet.fromClause(clause),\n expandedTerms = this.tokenSet.intersect(termTokenSet).toArray()\n\n /*\n * If a term marked as required does not exist in the tokenSet it is\n * impossible for the search to return any matches. We set all the field\n * scoped required matches set to empty and stop examining any further\n * clauses.\n */\n if (expandedTerms.length === 0 && clause.presence === lunr.Query.presence.REQUIRED) {\n for (var k = 0; k < clause.fields.length; k++) {\n var field = clause.fields[k]\n requiredMatches[field] = lunr.Set.empty\n }\n\n break\n }\n\n for (var j = 0; j < expandedTerms.length; j++) {\n /*\n * For each term get the posting and termIndex, this is required for\n * building the query vector.\n */\n var expandedTerm = expandedTerms[j],\n posting = this.invertedIndex[expandedTerm],\n termIndex = posting._index\n\n for (var k = 0; k < clause.fields.length; k++) {\n /*\n * For each field that this query term is scoped by (by default\n * all fields are in scope) we need to get all the document refs\n * that have this term in that field.\n *\n * The posting is the entry in the invertedIndex for the matching\n * term from above.\n */\n var field = clause.fields[k],\n fieldPosting = posting[field],\n matchingDocumentRefs = Object.keys(fieldPosting),\n termField = expandedTerm + \"/\" + field,\n matchingDocumentsSet = new lunr.Set(matchingDocumentRefs)\n\n /*\n * if the presence of this term is required ensure that the matching\n * documents are added to the set of required matches for this clause.\n *\n */\n if (clause.presence == lunr.Query.presence.REQUIRED) {\n clauseMatches = clauseMatches.union(matchingDocumentsSet)\n\n if (requiredMatches[field] === undefined) {\n requiredMatches[field] = lunr.Set.complete\n }\n }\n\n /*\n * if the presence of this term is prohibited ensure that the matching\n * documents are added to the set of prohibited matches for this field,\n * creating that set if it does not yet exist.\n */\n if (clause.presence == lunr.Query.presence.PROHIBITED) {\n if (prohibitedMatches[field] === undefined) {\n prohibitedMatches[field] = lunr.Set.empty\n }\n\n prohibitedMatches[field] = prohibitedMatches[field].union(matchingDocumentsSet)\n\n /*\n * Prohibited matches should not be part of the query vector used for\n * similarity scoring and no metadata should be extracted so we continue\n * to the next field\n */\n continue\n }\n\n /*\n * The query field vector is populated using the termIndex found for\n * the term and a unit value with the appropriate boost applied.\n * Using upsert because there could already be an entry in the vector\n * for the term we are working with. In that case we just add the scores\n * together.\n */\n queryVectors[field].upsert(termIndex, clause.boost, function (a, b) { return a + b })\n\n /**\n * If we've already seen this term, field combo then we've already collected\n * the matching documents and metadata, no need to go through all that again\n */\n if (termFieldCache[termField]) {\n continue\n }\n\n for (var l = 0; l < matchingDocumentRefs.length; l++) {\n /*\n * All metadata for this term/field/document triple\n * are then extracted and collected into an instance\n * of lunr.MatchData ready to be returned in the query\n * results\n */\n var matchingDocumentRef = matchingDocumentRefs[l],\n matchingFieldRef = new lunr.FieldRef (matchingDocumentRef, field),\n metadata = fieldPosting[matchingDocumentRef],\n fieldMatch\n\n if ((fieldMatch = matchingFields[matchingFieldRef]) === undefined) {\n matchingFields[matchingFieldRef] = new lunr.MatchData (expandedTerm, field, metadata)\n } else {\n fieldMatch.add(expandedTerm, field, metadata)\n }\n\n }\n\n termFieldCache[termField] = true\n }\n }\n }\n\n /**\n * If the presence was required we need to update the requiredMatches field sets.\n * We do this after all fields for the term have collected their matches because\n * the clause terms presence is required in _any_ of the fields not _all_ of the\n * fields.\n */\n if (clause.presence === lunr.Query.presence.REQUIRED) {\n for (var k = 0; k < clause.fields.length; k++) {\n var field = clause.fields[k]\n requiredMatches[field] = requiredMatches[field].intersect(clauseMatches)\n }\n }\n }\n\n /**\n * Need to combine the field scoped required and prohibited\n * matching documents into a global set of required and prohibited\n * matches\n */\n var allRequiredMatches = lunr.Set.complete,\n allProhibitedMatches = lunr.Set.empty\n\n for (var i = 0; i < this.fields.length; i++) {\n var field = this.fields[i]\n\n if (requiredMatches[field]) {\n allRequiredMatches = allRequiredMatches.intersect(requiredMatches[field])\n }\n\n if (prohibitedMatches[field]) {\n allProhibitedMatches = allProhibitedMatches.union(prohibitedMatches[field])\n }\n }\n\n var matchingFieldRefs = Object.keys(matchingFields),\n results = [],\n matches = Object.create(null)\n\n /*\n * If the query is negated (contains only prohibited terms)\n * we need to get _all_ fieldRefs currently existing in the\n * index. This is only done when we know that the query is\n * entirely prohibited terms to avoid any cost of getting all\n * fieldRefs unnecessarily.\n *\n * Additionally, blank MatchData must be created to correctly\n * populate the results.\n */\n if (query.isNegated()) {\n matchingFieldRefs = Object.keys(this.fieldVectors)\n\n for (var i = 0; i < matchingFieldRefs.length; i++) {\n var matchingFieldRef = matchingFieldRefs[i]\n var fieldRef = lunr.FieldRef.fromString(matchingFieldRef)\n matchingFields[matchingFieldRef] = new lunr.MatchData\n }\n }\n\n for (var i = 0; i < matchingFieldRefs.length; i++) {\n /*\n * Currently we have document fields that match the query, but we\n * need to return documents. The matchData and scores are combined\n * from multiple fields belonging to the same document.\n *\n * Scores are calculated by field, using the query vectors created\n * above, and combined into a final document score using addition.\n */\n var fieldRef = lunr.FieldRef.fromString(matchingFieldRefs[i]),\n docRef = fieldRef.docRef\n\n if (!allRequiredMatches.contains(docRef)) {\n continue\n }\n\n if (allProhibitedMatches.contains(docRef)) {\n continue\n }\n\n var fieldVector = this.fieldVectors[fieldRef],\n score = queryVectors[fieldRef.fieldName].similarity(fieldVector),\n docMatch\n\n if ((docMatch = matches[docRef]) !== undefined) {\n docMatch.score += score\n docMatch.matchData.combine(matchingFields[fieldRef])\n } else {\n var match = {\n ref: docRef,\n score: score,\n matchData: matchingFields[fieldRef]\n }\n matches[docRef] = match\n results.push(match)\n }\n }\n\n /*\n * Sort the results objects by score, highest first.\n */\n return results.sort(function (a, b) {\n return b.score - a.score\n })\n}\n\n/**\n * Prepares the index for JSON serialization.\n *\n * The schema for this JSON blob will be described in a\n * separate JSON schema file.\n *\n * @returns {Object}\n */\nlunr.Index.prototype.toJSON = function () {\n var invertedIndex = Object.keys(this.invertedIndex)\n .sort()\n .map(function (term) {\n return [term, this.invertedIndex[term]]\n }, this)\n\n var fieldVectors = Object.keys(this.fieldVectors)\n .map(function (ref) {\n return [ref, this.fieldVectors[ref].toJSON()]\n }, this)\n\n return {\n version: lunr.version,\n fields: this.fields,\n fieldVectors: fieldVectors,\n invertedIndex: invertedIndex,\n pipeline: this.pipeline.toJSON()\n }\n}\n\n/**\n * Loads a previously serialized lunr.Index\n *\n * @param {Object} serializedIndex - A previously serialized lunr.Index\n * @returns {lunr.Index}\n */\nlunr.Index.load = function (serializedIndex) {\n var attrs = {},\n fieldVectors = {},\n serializedVectors = serializedIndex.fieldVectors,\n invertedIndex = Object.create(null),\n serializedInvertedIndex = serializedIndex.invertedIndex,\n tokenSetBuilder = new lunr.TokenSet.Builder,\n pipeline = lunr.Pipeline.load(serializedIndex.pipeline)\n\n if (serializedIndex.version != lunr.version) {\n lunr.utils.warn(\"Version mismatch when loading serialised index. Current version of lunr '\" + lunr.version + \"' does not match serialized index '\" + serializedIndex.version + \"'\")\n }\n\n for (var i = 0; i < serializedVectors.length; i++) {\n var tuple = serializedVectors[i],\n ref = tuple[0],\n elements = tuple[1]\n\n fieldVectors[ref] = new lunr.Vector(elements)\n }\n\n for (var i = 0; i < serializedInvertedIndex.length; i++) {\n var tuple = serializedInvertedIndex[i],\n term = tuple[0],\n posting = tuple[1]\n\n tokenSetBuilder.insert(term)\n invertedIndex[term] = posting\n }\n\n tokenSetBuilder.finish()\n\n attrs.fields = serializedIndex.fields\n\n attrs.fieldVectors = fieldVectors\n attrs.invertedIndex = invertedIndex\n attrs.tokenSet = tokenSetBuilder.root\n attrs.pipeline = pipeline\n\n return new lunr.Index(attrs)\n}\n/*!\n * lunr.Builder\n * Copyright (C) 2020 Oliver Nightingale\n */\n\n/**\n * lunr.Builder performs indexing on a set of documents and\n * returns instances of lunr.Index ready for querying.\n *\n * All configuration of the index is done via the builder, the\n * fields to index, the document reference, the text processing\n * pipeline and document scoring parameters are all set on the\n * builder before indexing.\n *\n * @constructor\n * @property {string} _ref - Internal reference to the document reference field.\n * @property {string[]} _fields - Internal reference to the document fields to index.\n * @property {object} invertedIndex - The inverted index maps terms to document fields.\n * @property {object} documentTermFrequencies - Keeps track of document term frequencies.\n * @property {object} documentLengths - Keeps track of the length of documents added to the index.\n * @property {lunr.tokenizer} tokenizer - Function for splitting strings into tokens for indexing.\n * @property {lunr.Pipeline} pipeline - The pipeline performs text processing on tokens before indexing.\n * @property {lunr.Pipeline} searchPipeline - A pipeline for processing search terms before querying the index.\n * @property {number} documentCount - Keeps track of the total number of documents indexed.\n * @property {number} _b - A parameter to control field length normalization, setting this to 0 disabled normalization, 1 fully normalizes field lengths, the default value is 0.75.\n * @property {number} _k1 - A parameter to control how quickly an increase in term frequency results in term frequency saturation, the default value is 1.2.\n * @property {number} termIndex - A counter incremented for each unique term, used to identify a terms position in the vector space.\n * @property {array} metadataWhitelist - A list of metadata keys that have been whitelisted for entry in the index.\n */\nlunr.Builder = function () {\n this._ref = \"id\"\n this._fields = Object.create(null)\n this._documents = Object.create(null)\n this.invertedIndex = Object.create(null)\n this.fieldTermFrequencies = {}\n this.fieldLengths = {}\n this.tokenizer = lunr.tokenizer\n this.pipeline = new lunr.Pipeline\n this.searchPipeline = new lunr.Pipeline\n this.documentCount = 0\n this._b = 0.75\n this._k1 = 1.2\n this.termIndex = 0\n this.metadataWhitelist = []\n}\n\n/**\n * Sets the document field used as the document reference. Every document must have this field.\n * The type of this field in the document should be a string, if it is not a string it will be\n * coerced into a string by calling toString.\n *\n * The default ref is 'id'.\n *\n * The ref should _not_ be changed during indexing, it should be set before any documents are\n * added to the index. Changing it during indexing can lead to inconsistent results.\n *\n * @param {string} ref - The name of the reference field in the document.\n */\nlunr.Builder.prototype.ref = function (ref) {\n this._ref = ref\n}\n\n/**\n * A function that is used to extract a field from a document.\n *\n * Lunr expects a field to be at the top level of a document, if however the field\n * is deeply nested within a document an extractor function can be used to extract\n * the right field for indexing.\n *\n * @callback fieldExtractor\n * @param {object} doc - The document being added to the index.\n * @returns {?(string|object|object[])} obj - The object that will be indexed for this field.\n * @example Extracting a nested field\n * function (doc) { return doc.nested.field }\n */\n\n/**\n * Adds a field to the list of document fields that will be indexed. Every document being\n * indexed should have this field. Null values for this field in indexed documents will\n * not cause errors but will limit the chance of that document being retrieved by searches.\n *\n * All fields should be added before adding documents to the index. Adding fields after\n * a document has been indexed will have no effect on already indexed documents.\n *\n * Fields can be boosted at build time. This allows terms within that field to have more\n * importance when ranking search results. Use a field boost to specify that matches within\n * one field are more important than other fields.\n *\n * @param {string} fieldName - The name of a field to index in all documents.\n * @param {object} attributes - Optional attributes associated with this field.\n * @param {number} [attributes.boost=1] - Boost applied to all terms within this field.\n * @param {fieldExtractor} [attributes.extractor] - Function to extract a field from a document.\n * @throws {RangeError} fieldName cannot contain unsupported characters '/'\n */\nlunr.Builder.prototype.field = function (fieldName, attributes) {\n if (/\\//.test(fieldName)) {\n throw new RangeError (\"Field '\" + fieldName + \"' contains illegal character '/'\")\n }\n\n this._fields[fieldName] = attributes || {}\n}\n\n/**\n * A parameter to tune the amount of field length normalisation that is applied when\n * calculating relevance scores. A value of 0 will completely disable any normalisation\n * and a value of 1 will fully normalise field lengths. The default is 0.75. Values of b\n * will be clamped to the range 0 - 1.\n *\n * @param {number} number - The value to set for this tuning parameter.\n */\nlunr.Builder.prototype.b = function (number) {\n if (number < 0) {\n this._b = 0\n } else if (number > 1) {\n this._b = 1\n } else {\n this._b = number\n }\n}\n\n/**\n * A parameter that controls the speed at which a rise in term frequency results in term\n * frequency saturation. The default value is 1.2. Setting this to a higher value will give\n * slower saturation levels, a lower value will result in quicker saturation.\n *\n * @param {number} number - The value to set for this tuning parameter.\n */\nlunr.Builder.prototype.k1 = function (number) {\n this._k1 = number\n}\n\n/**\n * Adds a document to the index.\n *\n * Before adding fields to the index the index should have been fully setup, with the document\n * ref and all fields to index already having been specified.\n *\n * The document must have a field name as specified by the ref (by default this is 'id') and\n * it should have all fields defined for indexing, though null or undefined values will not\n * cause errors.\n *\n * Entire documents can be boosted at build time. Applying a boost to a document indicates that\n * this document should rank higher in search results than other documents.\n *\n * @param {object} doc - The document to add to the index.\n * @param {object} attributes - Optional attributes associated with this document.\n * @param {number} [attributes.boost=1] - Boost applied to all terms within this document.\n */\nlunr.Builder.prototype.add = function (doc, attributes) {\n var docRef = doc[this._ref],\n fields = Object.keys(this._fields)\n\n this._documents[docRef] = attributes || {}\n this.documentCount += 1\n\n for (var i = 0; i < fields.length; i++) {\n var fieldName = fields[i],\n extractor = this._fields[fieldName].extractor,\n field = extractor ? extractor(doc) : doc[fieldName],\n tokens = this.tokenizer(field, {\n fields: [fieldName]\n }),\n terms = this.pipeline.run(tokens),\n fieldRef = new lunr.FieldRef (docRef, fieldName),\n fieldTerms = Object.create(null)\n\n this.fieldTermFrequencies[fieldRef] = fieldTerms\n this.fieldLengths[fieldRef] = 0\n\n // store the length of this field for this document\n this.fieldLengths[fieldRef] += terms.length\n\n // calculate term frequencies for this field\n for (var j = 0; j < terms.length; j++) {\n var term = terms[j]\n\n if (fieldTerms[term] == undefined) {\n fieldTerms[term] = 0\n }\n\n fieldTerms[term] += 1\n\n // add to inverted index\n // create an initial posting if one doesn't exist\n if (this.invertedIndex[term] == undefined) {\n var posting = Object.create(null)\n posting[\"_index\"] = this.termIndex\n this.termIndex += 1\n\n for (var k = 0; k < fields.length; k++) {\n posting[fields[k]] = Object.create(null)\n }\n\n this.invertedIndex[term] = posting\n }\n\n // add an entry for this term/fieldName/docRef to the invertedIndex\n if (this.invertedIndex[term][fieldName][docRef] == undefined) {\n this.invertedIndex[term][fieldName][docRef] = Object.create(null)\n }\n\n // store all whitelisted metadata about this token in the\n // inverted index\n for (var l = 0; l < this.metadataWhitelist.length; l++) {\n var metadataKey = this.metadataWhitelist[l],\n metadata = term.metadata[metadataKey]\n\n if (this.invertedIndex[term][fieldName][docRef][metadataKey] == undefined) {\n this.invertedIndex[term][fieldName][docRef][metadataKey] = []\n }\n\n this.invertedIndex[term][fieldName][docRef][metadataKey].push(metadata)\n }\n }\n\n }\n}\n\n/**\n * Calculates the average document length for this index\n *\n * @private\n */\nlunr.Builder.prototype.calculateAverageFieldLengths = function () {\n\n var fieldRefs = Object.keys(this.fieldLengths),\n numberOfFields = fieldRefs.length,\n accumulator = {},\n documentsWithField = {}\n\n for (var i = 0; i < numberOfFields; i++) {\n var fieldRef = lunr.FieldRef.fromString(fieldRefs[i]),\n field = fieldRef.fieldName\n\n documentsWithField[field] || (documentsWithField[field] = 0)\n documentsWithField[field] += 1\n\n accumulator[field] || (accumulator[field] = 0)\n accumulator[field] += this.fieldLengths[fieldRef]\n }\n\n var fields = Object.keys(this._fields)\n\n for (var i = 0; i < fields.length; i++) {\n var fieldName = fields[i]\n accumulator[fieldName] = accumulator[fieldName] / documentsWithField[fieldName]\n }\n\n this.averageFieldLength = accumulator\n}\n\n/**\n * Builds a vector space model of every document using lunr.Vector\n *\n * @private\n */\nlunr.Builder.prototype.createFieldVectors = function () {\n var fieldVectors = {},\n fieldRefs = Object.keys(this.fieldTermFrequencies),\n fieldRefsLength = fieldRefs.length,\n termIdfCache = Object.create(null)\n\n for (var i = 0; i < fieldRefsLength; i++) {\n var fieldRef = lunr.FieldRef.fromString(fieldRefs[i]),\n fieldName = fieldRef.fieldName,\n fieldLength = this.fieldLengths[fieldRef],\n fieldVector = new lunr.Vector,\n termFrequencies = this.fieldTermFrequencies[fieldRef],\n terms = Object.keys(termFrequencies),\n termsLength = terms.length\n\n\n var fieldBoost = this._fields[fieldName].boost || 1,\n docBoost = this._documents[fieldRef.docRef].boost || 1\n\n for (var j = 0; j < termsLength; j++) {\n var term = terms[j],\n tf = termFrequencies[term],\n termIndex = this.invertedIndex[term]._index,\n idf, score, scoreWithPrecision\n\n if (termIdfCache[term] === undefined) {\n idf = lunr.idf(this.invertedIndex[term], this.documentCount)\n termIdfCache[term] = idf\n } else {\n idf = termIdfCache[term]\n }\n\n score = idf * ((this._k1 + 1) * tf) / (this._k1 * (1 - this._b + this._b * (fieldLength / this.averageFieldLength[fieldName])) + tf)\n score *= fieldBoost\n score *= docBoost\n scoreWithPrecision = Math.round(score * 1000) / 1000\n // Converts 1.23456789 to 1.234.\n // Reducing the precision so that the vectors take up less\n // space when serialised. Doing it now so that they behave\n // the same before and after serialisation. Also, this is\n // the fastest approach to reducing a number's precision in\n // JavaScript.\n\n fieldVector.insert(termIndex, scoreWithPrecision)\n }\n\n fieldVectors[fieldRef] = fieldVector\n }\n\n this.fieldVectors = fieldVectors\n}\n\n/**\n * Creates a token set of all tokens in the index using lunr.TokenSet\n *\n * @private\n */\nlunr.Builder.prototype.createTokenSet = function () {\n this.tokenSet = lunr.TokenSet.fromArray(\n Object.keys(this.invertedIndex).sort()\n )\n}\n\n/**\n * Builds the index, creating an instance of lunr.Index.\n *\n * This completes the indexing process and should only be called\n * once all documents have been added to the index.\n *\n * @returns {lunr.Index}\n */\nlunr.Builder.prototype.build = function () {\n this.calculateAverageFieldLengths()\n this.createFieldVectors()\n this.createTokenSet()\n\n return new lunr.Index({\n invertedIndex: this.invertedIndex,\n fieldVectors: this.fieldVectors,\n tokenSet: this.tokenSet,\n fields: Object.keys(this._fields),\n pipeline: this.searchPipeline\n })\n}\n\n/**\n * Applies a plugin to the index builder.\n *\n * A plugin is a function that is called with the index builder as its context.\n * Plugins can be used to customise or extend the behaviour of the index\n * in some way. A plugin is just a function, that encapsulated the custom\n * behaviour that should be applied when building the index.\n *\n * The plugin function will be called with the index builder as its argument, additional\n * arguments can also be passed when calling use. The function will be called\n * with the index builder as its context.\n *\n * @param {Function} plugin The plugin to apply.\n */\nlunr.Builder.prototype.use = function (fn) {\n var args = Array.prototype.slice.call(arguments, 1)\n args.unshift(this)\n fn.apply(this, args)\n}\n/**\n * Contains and collects metadata about a matching document.\n * A single instance of lunr.MatchData is returned as part of every\n * lunr.Index~Result.\n *\n * @constructor\n * @param {string} term - The term this match data is associated with\n * @param {string} field - The field in which the term was found\n * @param {object} metadata - The metadata recorded about this term in this field\n * @property {object} metadata - A cloned collection of metadata associated with this document.\n * @see {@link lunr.Index~Result}\n */\nlunr.MatchData = function (term, field, metadata) {\n var clonedMetadata = Object.create(null),\n metadataKeys = Object.keys(metadata || {})\n\n // Cloning the metadata to prevent the original\n // being mutated during match data combination.\n // Metadata is kept in an array within the inverted\n // index so cloning the data can be done with\n // Array#slice\n for (var i = 0; i < metadataKeys.length; i++) {\n var key = metadataKeys[i]\n clonedMetadata[key] = metadata[key].slice()\n }\n\n this.metadata = Object.create(null)\n\n if (term !== undefined) {\n this.metadata[term] = Object.create(null)\n this.metadata[term][field] = clonedMetadata\n }\n}\n\n/**\n * An instance of lunr.MatchData will be created for every term that matches a\n * document. However only one instance is required in a lunr.Index~Result. This\n * method combines metadata from another instance of lunr.MatchData with this\n * objects metadata.\n *\n * @param {lunr.MatchData} otherMatchData - Another instance of match data to merge with this one.\n * @see {@link lunr.Index~Result}\n */\nlunr.MatchData.prototype.combine = function (otherMatchData) {\n var terms = Object.keys(otherMatchData.metadata)\n\n for (var i = 0; i < terms.length; i++) {\n var term = terms[i],\n fields = Object.keys(otherMatchData.metadata[term])\n\n if (this.metadata[term] == undefined) {\n this.metadata[term] = Object.create(null)\n }\n\n for (var j = 0; j < fields.length; j++) {\n var field = fields[j],\n keys = Object.keys(otherMatchData.metadata[term][field])\n\n if (this.metadata[term][field] == undefined) {\n this.metadata[term][field] = Object.create(null)\n }\n\n for (var k = 0; k < keys.length; k++) {\n var key = keys[k]\n\n if (this.metadata[term][field][key] == undefined) {\n this.metadata[term][field][key] = otherMatchData.metadata[term][field][key]\n } else {\n this.metadata[term][field][key] = this.metadata[term][field][key].concat(otherMatchData.metadata[term][field][key])\n }\n\n }\n }\n }\n}\n\n/**\n * Add metadata for a term/field pair to this instance of match data.\n *\n * @param {string} term - The term this match data is associated with\n * @param {string} field - The field in which the term was found\n * @param {object} metadata - The metadata recorded about this term in this field\n */\nlunr.MatchData.prototype.add = function (term, field, metadata) {\n if (!(term in this.metadata)) {\n this.metadata[term] = Object.create(null)\n this.metadata[term][field] = metadata\n return\n }\n\n if (!(field in this.metadata[term])) {\n this.metadata[term][field] = metadata\n return\n }\n\n var metadataKeys = Object.keys(metadata)\n\n for (var i = 0; i < metadataKeys.length; i++) {\n var key = metadataKeys[i]\n\n if (key in this.metadata[term][field]) {\n this.metadata[term][field][key] = this.metadata[term][field][key].concat(metadata[key])\n } else {\n this.metadata[term][field][key] = metadata[key]\n }\n }\n}\n/**\n * A lunr.Query provides a programmatic way of defining queries to be performed\n * against a {@link lunr.Index}.\n *\n * Prefer constructing a lunr.Query using the {@link lunr.Index#query} method\n * so the query object is pre-initialized with the right index fields.\n *\n * @constructor\n * @property {lunr.Query~Clause[]} clauses - An array of query clauses.\n * @property {string[]} allFields - An array of all available fields in a lunr.Index.\n */\nlunr.Query = function (allFields) {\n this.clauses = []\n this.allFields = allFields\n}\n\n/**\n * Constants for indicating what kind of automatic wildcard insertion will be used when constructing a query clause.\n *\n * This allows wildcards to be added to the beginning and end of a term without having to manually do any string\n * concatenation.\n *\n * The wildcard constants can be bitwise combined to select both leading and trailing wildcards.\n *\n * @constant\n * @default\n * @property {number} wildcard.NONE - The term will have no wildcards inserted, this is the default behaviour\n * @property {number} wildcard.LEADING - Prepend the term with a wildcard, unless a leading wildcard already exists\n * @property {number} wildcard.TRAILING - Append a wildcard to the term, unless a trailing wildcard already exists\n * @see lunr.Query~Clause\n * @see lunr.Query#clause\n * @see lunr.Query#term\n * @example query term with trailing wildcard\n * query.term('foo', { wildcard: lunr.Query.wildcard.TRAILING })\n * @example query term with leading and trailing wildcard\n * query.term('foo', {\n * wildcard: lunr.Query.wildcard.LEADING | lunr.Query.wildcard.TRAILING\n * })\n */\n\nlunr.Query.wildcard = new String (\"*\")\nlunr.Query.wildcard.NONE = 0\nlunr.Query.wildcard.LEADING = 1\nlunr.Query.wildcard.TRAILING = 2\n\n/**\n * Constants for indicating what kind of presence a term must have in matching documents.\n *\n * @constant\n * @enum {number}\n * @see lunr.Query~Clause\n * @see lunr.Query#clause\n * @see lunr.Query#term\n * @example query term with required presence\n * query.term('foo', { presence: lunr.Query.presence.REQUIRED })\n */\nlunr.Query.presence = {\n /**\n * Term's presence in a document is optional, this is the default value.\n */\n OPTIONAL: 1,\n\n /**\n * Term's presence in a document is required, documents that do not contain\n * this term will not be returned.\n */\n REQUIRED: 2,\n\n /**\n * Term's presence in a document is prohibited, documents that do contain\n * this term will not be returned.\n */\n PROHIBITED: 3\n}\n\n/**\n * A single clause in a {@link lunr.Query} contains a term and details on how to\n * match that term against a {@link lunr.Index}.\n *\n * @typedef {Object} lunr.Query~Clause\n * @property {string[]} fields - The fields in an index this clause should be matched against.\n * @property {number} [boost=1] - Any boost that should be applied when matching this clause.\n * @property {number} [editDistance] - Whether the term should have fuzzy matching applied, and how fuzzy the match should be.\n * @property {boolean} [usePipeline] - Whether the term should be passed through the search pipeline.\n * @property {number} [wildcard=lunr.Query.wildcard.NONE] - Whether the term should have wildcards appended or prepended.\n * @property {number} [presence=lunr.Query.presence.OPTIONAL] - The terms presence in any matching documents.\n */\n\n/**\n * Adds a {@link lunr.Query~Clause} to this query.\n *\n * Unless the clause contains the fields to be matched all fields will be matched. In addition\n * a default boost of 1 is applied to the clause.\n *\n * @param {lunr.Query~Clause} clause - The clause to add to this query.\n * @see lunr.Query~Clause\n * @returns {lunr.Query}\n */\nlunr.Query.prototype.clause = function (clause) {\n if (!('fields' in clause)) {\n clause.fields = this.allFields\n }\n\n if (!('boost' in clause)) {\n clause.boost = 1\n }\n\n if (!('usePipeline' in clause)) {\n clause.usePipeline = true\n }\n\n if (!('wildcard' in clause)) {\n clause.wildcard = lunr.Query.wildcard.NONE\n }\n\n if ((clause.wildcard & lunr.Query.wildcard.LEADING) && (clause.term.charAt(0) != lunr.Query.wildcard)) {\n clause.term = \"*\" + clause.term\n }\n\n if ((clause.wildcard & lunr.Query.wildcard.TRAILING) && (clause.term.slice(-1) != lunr.Query.wildcard)) {\n clause.term = \"\" + clause.term + \"*\"\n }\n\n if (!('presence' in clause)) {\n clause.presence = lunr.Query.presence.OPTIONAL\n }\n\n this.clauses.push(clause)\n\n return this\n}\n\n/**\n * A negated query is one in which every clause has a presence of\n * prohibited. These queries require some special processing to return\n * the expected results.\n *\n * @returns boolean\n */\nlunr.Query.prototype.isNegated = function () {\n for (var i = 0; i < this.clauses.length; i++) {\n if (this.clauses[i].presence != lunr.Query.presence.PROHIBITED) {\n return false\n }\n }\n\n return true\n}\n\n/**\n * Adds a term to the current query, under the covers this will create a {@link lunr.Query~Clause}\n * to the list of clauses that make up this query.\n *\n * The term is used as is, i.e. no tokenization will be performed by this method. Instead conversion\n * to a token or token-like string should be done before calling this method.\n *\n * The term will be converted to a string by calling `toString`. Multiple terms can be passed as an\n * array, each term in the array will share the same options.\n *\n * @param {object|object[]} term - The term(s) to add to the query.\n * @param {object} [options] - Any additional properties to add to the query clause.\n * @returns {lunr.Query}\n * @see lunr.Query#clause\n * @see lunr.Query~Clause\n * @example adding a single term to a query\n * query.term(\"foo\")\n * @example adding a single term to a query and specifying search fields, term boost and automatic trailing wildcard\n * query.term(\"foo\", {\n * fields: [\"title\"],\n * boost: 10,\n * wildcard: lunr.Query.wildcard.TRAILING\n * })\n * @example using lunr.tokenizer to convert a string to tokens before using them as terms\n * query.term(lunr.tokenizer(\"foo bar\"))\n */\nlunr.Query.prototype.term = function (term, options) {\n if (Array.isArray(term)) {\n term.forEach(function (t) { this.term(t, lunr.utils.clone(options)) }, this)\n return this\n }\n\n var clause = options || {}\n clause.term = term.toString()\n\n this.clause(clause)\n\n return this\n}\nlunr.QueryParseError = function (message, start, end) {\n this.name = \"QueryParseError\"\n this.message = message\n this.start = start\n this.end = end\n}\n\nlunr.QueryParseError.prototype = new Error\nlunr.QueryLexer = function (str) {\n this.lexemes = []\n this.str = str\n this.length = str.length\n this.pos = 0\n this.start = 0\n this.escapeCharPositions = []\n}\n\nlunr.QueryLexer.prototype.run = function () {\n var state = lunr.QueryLexer.lexText\n\n while (state) {\n state = state(this)\n }\n}\n\nlunr.QueryLexer.prototype.sliceString = function () {\n var subSlices = [],\n sliceStart = this.start,\n sliceEnd = this.pos\n\n for (var i = 0; i < this.escapeCharPositions.length; i++) {\n sliceEnd = this.escapeCharPositions[i]\n subSlices.push(this.str.slice(sliceStart, sliceEnd))\n sliceStart = sliceEnd + 1\n }\n\n subSlices.push(this.str.slice(sliceStart, this.pos))\n this.escapeCharPositions.length = 0\n\n return subSlices.join('')\n}\n\nlunr.QueryLexer.prototype.emit = function (type) {\n this.lexemes.push({\n type: type,\n str: this.sliceString(),\n start: this.start,\n end: this.pos\n })\n\n this.start = this.pos\n}\n\nlunr.QueryLexer.prototype.escapeCharacter = function () {\n this.escapeCharPositions.push(this.pos - 1)\n this.pos += 1\n}\n\nlunr.QueryLexer.prototype.next = function () {\n if (this.pos >= this.length) {\n return lunr.QueryLexer.EOS\n }\n\n var char = this.str.charAt(this.pos)\n this.pos += 1\n return char\n}\n\nlunr.QueryLexer.prototype.width = function () {\n return this.pos - this.start\n}\n\nlunr.QueryLexer.prototype.ignore = function () {\n if (this.start == this.pos) {\n this.pos += 1\n }\n\n this.start = this.pos\n}\n\nlunr.QueryLexer.prototype.backup = function () {\n this.pos -= 1\n}\n\nlunr.QueryLexer.prototype.acceptDigitRun = function () {\n var char, charCode\n\n do {\n char = this.next()\n charCode = char.charCodeAt(0)\n } while (charCode > 47 && charCode < 58)\n\n if (char != lunr.QueryLexer.EOS) {\n this.backup()\n }\n}\n\nlunr.QueryLexer.prototype.more = function () {\n return this.pos < this.length\n}\n\nlunr.QueryLexer.EOS = 'EOS'\nlunr.QueryLexer.FIELD = 'FIELD'\nlunr.QueryLexer.TERM = 'TERM'\nlunr.QueryLexer.EDIT_DISTANCE = 'EDIT_DISTANCE'\nlunr.QueryLexer.BOOST = 'BOOST'\nlunr.QueryLexer.PRESENCE = 'PRESENCE'\n\nlunr.QueryLexer.lexField = function (lexer) {\n lexer.backup()\n lexer.emit(lunr.QueryLexer.FIELD)\n lexer.ignore()\n return lunr.QueryLexer.lexText\n}\n\nlunr.QueryLexer.lexTerm = function (lexer) {\n if (lexer.width() > 1) {\n lexer.backup()\n lexer.emit(lunr.QueryLexer.TERM)\n }\n\n lexer.ignore()\n\n if (lexer.more()) {\n return lunr.QueryLexer.lexText\n }\n}\n\nlunr.QueryLexer.lexEditDistance = function (lexer) {\n lexer.ignore()\n lexer.acceptDigitRun()\n lexer.emit(lunr.QueryLexer.EDIT_DISTANCE)\n return lunr.QueryLexer.lexText\n}\n\nlunr.QueryLexer.lexBoost = function (lexer) {\n lexer.ignore()\n lexer.acceptDigitRun()\n lexer.emit(lunr.QueryLexer.BOOST)\n return lunr.QueryLexer.lexText\n}\n\nlunr.QueryLexer.lexEOS = function (lexer) {\n if (lexer.width() > 0) {\n lexer.emit(lunr.QueryLexer.TERM)\n }\n}\n\n// This matches the separator used when tokenising fields\n// within a document. These should match otherwise it is\n// not possible to search for some tokens within a document.\n//\n// It is possible for the user to change the separator on the\n// tokenizer so it _might_ clash with any other of the special\n// characters already used within the search string, e.g. :.\n//\n// This means that it is possible to change the separator in\n// such a way that makes some words unsearchable using a search\n// string.\nlunr.QueryLexer.termSeparator = lunr.tokenizer.separator\n\nlunr.QueryLexer.lexText = function (lexer) {\n while (true) {\n var char = lexer.next()\n\n if (char == lunr.QueryLexer.EOS) {\n return lunr.QueryLexer.lexEOS\n }\n\n // Escape character is '\\'\n if (char.charCodeAt(0) == 92) {\n lexer.escapeCharacter()\n continue\n }\n\n if (char == \":\") {\n return lunr.QueryLexer.lexField\n }\n\n if (char == \"~\") {\n lexer.backup()\n if (lexer.width() > 0) {\n lexer.emit(lunr.QueryLexer.TERM)\n }\n return lunr.QueryLexer.lexEditDistance\n }\n\n if (char == \"^\") {\n lexer.backup()\n if (lexer.width() > 0) {\n lexer.emit(lunr.QueryLexer.TERM)\n }\n return lunr.QueryLexer.lexBoost\n }\n\n // \"+\" indicates term presence is required\n // checking for length to ensure that only\n // leading \"+\" are considered\n if (char == \"+\" && lexer.width() === 1) {\n lexer.emit(lunr.QueryLexer.PRESENCE)\n return lunr.QueryLexer.lexText\n }\n\n // \"-\" indicates term presence is prohibited\n // checking for length to ensure that only\n // leading \"-\" are considered\n if (char == \"-\" && lexer.width() === 1) {\n lexer.emit(lunr.QueryLexer.PRESENCE)\n return lunr.QueryLexer.lexText\n }\n\n if (char.match(lunr.QueryLexer.termSeparator)) {\n return lunr.QueryLexer.lexTerm\n }\n }\n}\n\nlunr.QueryParser = function (str, query) {\n this.lexer = new lunr.QueryLexer (str)\n this.query = query\n this.currentClause = {}\n this.lexemeIdx = 0\n}\n\nlunr.QueryParser.prototype.parse = function () {\n this.lexer.run()\n this.lexemes = this.lexer.lexemes\n\n var state = lunr.QueryParser.parseClause\n\n while (state) {\n state = state(this)\n }\n\n return this.query\n}\n\nlunr.QueryParser.prototype.peekLexeme = function () {\n return this.lexemes[this.lexemeIdx]\n}\n\nlunr.QueryParser.prototype.consumeLexeme = function () {\n var lexeme = this.peekLexeme()\n this.lexemeIdx += 1\n return lexeme\n}\n\nlunr.QueryParser.prototype.nextClause = function () {\n var completedClause = this.currentClause\n this.query.clause(completedClause)\n this.currentClause = {}\n}\n\nlunr.QueryParser.parseClause = function (parser) {\n var lexeme = parser.peekLexeme()\n\n if (lexeme == undefined) {\n return\n }\n\n switch (lexeme.type) {\n case lunr.QueryLexer.PRESENCE:\n return lunr.QueryParser.parsePresence\n case lunr.QueryLexer.FIELD:\n return lunr.QueryParser.parseField\n case lunr.QueryLexer.TERM:\n return lunr.QueryParser.parseTerm\n default:\n var errorMessage = \"expected either a field or a term, found \" + lexeme.type\n\n if (lexeme.str.length >= 1) {\n errorMessage += \" with value '\" + lexeme.str + \"'\"\n }\n\n throw new lunr.QueryParseError (errorMessage, lexeme.start, lexeme.end)\n }\n}\n\nlunr.QueryParser.parsePresence = function (parser) {\n var lexeme = parser.consumeLexeme()\n\n if (lexeme == undefined) {\n return\n }\n\n switch (lexeme.str) {\n case \"-\":\n parser.currentClause.presence = lunr.Query.presence.PROHIBITED\n break\n case \"+\":\n parser.currentClause.presence = lunr.Query.presence.REQUIRED\n break\n default:\n var errorMessage = \"unrecognised presence operator'\" + lexeme.str + \"'\"\n throw new lunr.QueryParseError (errorMessage, lexeme.start, lexeme.end)\n }\n\n var nextLexeme = parser.peekLexeme()\n\n if (nextLexeme == undefined) {\n var errorMessage = \"expecting term or field, found nothing\"\n throw new lunr.QueryParseError (errorMessage, lexeme.start, lexeme.end)\n }\n\n switch (nextLexeme.type) {\n case lunr.QueryLexer.FIELD:\n return lunr.QueryParser.parseField\n case lunr.QueryLexer.TERM:\n return lunr.QueryParser.parseTerm\n default:\n var errorMessage = \"expecting term or field, found '\" + nextLexeme.type + \"'\"\n throw new lunr.QueryParseError (errorMessage, nextLexeme.start, nextLexeme.end)\n }\n}\n\nlunr.QueryParser.parseField = function (parser) {\n var lexeme = parser.consumeLexeme()\n\n if (lexeme == undefined) {\n return\n }\n\n if (parser.query.allFields.indexOf(lexeme.str) == -1) {\n var possibleFields = parser.query.allFields.map(function (f) { return \"'\" + f + \"'\" }).join(', '),\n errorMessage = \"unrecognised field '\" + lexeme.str + \"', possible fields: \" + possibleFields\n\n throw new lunr.QueryParseError (errorMessage, lexeme.start, lexeme.end)\n }\n\n parser.currentClause.fields = [lexeme.str]\n\n var nextLexeme = parser.peekLexeme()\n\n if (nextLexeme == undefined) {\n var errorMessage = \"expecting term, found nothing\"\n throw new lunr.QueryParseError (errorMessage, lexeme.start, lexeme.end)\n }\n\n switch (nextLexeme.type) {\n case lunr.QueryLexer.TERM:\n return lunr.QueryParser.parseTerm\n default:\n var errorMessage = \"expecting term, found '\" + nextLexeme.type + \"'\"\n throw new lunr.QueryParseError (errorMessage, nextLexeme.start, nextLexeme.end)\n }\n}\n\nlunr.QueryParser.parseTerm = function (parser) {\n var lexeme = parser.consumeLexeme()\n\n if (lexeme == undefined) {\n return\n }\n\n parser.currentClause.term = lexeme.str.toLowerCase()\n\n if (lexeme.str.indexOf(\"*\") != -1) {\n parser.currentClause.usePipeline = false\n }\n\n var nextLexeme = parser.peekLexeme()\n\n if (nextLexeme == undefined) {\n parser.nextClause()\n return\n }\n\n switch (nextLexeme.type) {\n case lunr.QueryLexer.TERM:\n parser.nextClause()\n return lunr.QueryParser.parseTerm\n case lunr.QueryLexer.FIELD:\n parser.nextClause()\n return lunr.QueryParser.parseField\n case lunr.QueryLexer.EDIT_DISTANCE:\n return lunr.QueryParser.parseEditDistance\n case lunr.QueryLexer.BOOST:\n return lunr.QueryParser.parseBoost\n case lunr.QueryLexer.PRESENCE:\n parser.nextClause()\n return lunr.QueryParser.parsePresence\n default:\n var errorMessage = \"Unexpected lexeme type '\" + nextLexeme.type + \"'\"\n throw new lunr.QueryParseError (errorMessage, nextLexeme.start, nextLexeme.end)\n }\n}\n\nlunr.QueryParser.parseEditDistance = function (parser) {\n var lexeme = parser.consumeLexeme()\n\n if (lexeme == undefined) {\n return\n }\n\n var editDistance = parseInt(lexeme.str, 10)\n\n if (isNaN(editDistance)) {\n var errorMessage = \"edit distance must be numeric\"\n throw new lunr.QueryParseError (errorMessage, lexeme.start, lexeme.end)\n }\n\n parser.currentClause.editDistance = editDistance\n\n var nextLexeme = parser.peekLexeme()\n\n if (nextLexeme == undefined) {\n parser.nextClause()\n return\n }\n\n switch (nextLexeme.type) {\n case lunr.QueryLexer.TERM:\n parser.nextClause()\n return lunr.QueryParser.parseTerm\n case lunr.QueryLexer.FIELD:\n parser.nextClause()\n return lunr.QueryParser.parseField\n case lunr.QueryLexer.EDIT_DISTANCE:\n return lunr.QueryParser.parseEditDistance\n case lunr.QueryLexer.BOOST:\n return lunr.QueryParser.parseBoost\n case lunr.QueryLexer.PRESENCE:\n parser.nextClause()\n return lunr.QueryParser.parsePresence\n default:\n var errorMessage = \"Unexpected lexeme type '\" + nextLexeme.type + \"'\"\n throw new lunr.QueryParseError (errorMessage, nextLexeme.start, nextLexeme.end)\n }\n}\n\nlunr.QueryParser.parseBoost = function (parser) {\n var lexeme = parser.consumeLexeme()\n\n if (lexeme == undefined) {\n return\n }\n\n var boost = parseInt(lexeme.str, 10)\n\n if (isNaN(boost)) {\n var errorMessage = \"boost must be numeric\"\n throw new lunr.QueryParseError (errorMessage, lexeme.start, lexeme.end)\n }\n\n parser.currentClause.boost = boost\n\n var nextLexeme = parser.peekLexeme()\n\n if (nextLexeme == undefined) {\n parser.nextClause()\n return\n }\n\n switch (nextLexeme.type) {\n case lunr.QueryLexer.TERM:\n parser.nextClause()\n return lunr.QueryParser.parseTerm\n case lunr.QueryLexer.FIELD:\n parser.nextClause()\n return lunr.QueryParser.parseField\n case lunr.QueryLexer.EDIT_DISTANCE:\n return lunr.QueryParser.parseEditDistance\n case lunr.QueryLexer.BOOST:\n return lunr.QueryParser.parseBoost\n case lunr.QueryLexer.PRESENCE:\n parser.nextClause()\n return lunr.QueryParser.parsePresence\n default:\n var errorMessage = \"Unexpected lexeme type '\" + nextLexeme.type + \"'\"\n throw new lunr.QueryParseError (errorMessage, nextLexeme.start, nextLexeme.end)\n }\n}\n\n /**\n * export the module via AMD, CommonJS or as a browser global\n * Export code from https://github.com/umdjs/umd/blob/master/returnExports.js\n */\n ;(function (root, factory) {\n if (typeof define === 'function' && define.amd) {\n // AMD. Register as an anonymous module.\n define(factory)\n } else if (typeof exports === 'object') {\n /**\n * Node. Does not work with strict CommonJS, but\n * only CommonJS-like enviroments that support module.exports,\n * like Node.\n */\n module.exports = factory()\n } else {\n // Browser globals (root is window)\n root.lunr = factory()\n }\n }(this, function () {\n /**\n * Just return a value to define the module export.\n * This example returns an object, but the module\n * can return a function as the exported value.\n */\n return lunr\n }))\n})();\n", "/*!\n * escape-html\n * Copyright(c) 2012-2013 TJ Holowaychuk\n * Copyright(c) 2015 Andreas Lubbe\n * Copyright(c) 2015 Tiancheng \"Timothy\" Gu\n * MIT Licensed\n */\n\n'use strict';\n\n/**\n * Module variables.\n * @private\n */\n\nvar matchHtmlRegExp = /[\"'&<>]/;\n\n/**\n * Module exports.\n * @public\n */\n\nmodule.exports = escapeHtml;\n\n/**\n * Escape special characters in the given string of html.\n *\n * @param {string} string The string to escape for inserting into HTML\n * @return {string}\n * @public\n */\n\nfunction escapeHtml(string) {\n var str = '' + string;\n var match = matchHtmlRegExp.exec(str);\n\n if (!match) {\n return str;\n }\n\n var escape;\n var html = '';\n var index = 0;\n var lastIndex = 0;\n\n for (index = match.index; index < str.length; index++) {\n switch (str.charCodeAt(index)) {\n case 34: // \"\n escape = '"';\n break;\n case 38: // &\n escape = '&';\n break;\n case 39: // '\n escape = ''';\n break;\n case 60: // <\n escape = '<';\n break;\n case 62: // >\n escape = '>';\n break;\n default:\n continue;\n }\n\n if (lastIndex !== index) {\n html += str.substring(lastIndex, index);\n }\n\n lastIndex = index + 1;\n html += escape;\n }\n\n return lastIndex !== index\n ? html + str.substring(lastIndex, index)\n : html;\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A RTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport lunr from \"lunr\"\n\nimport \"~/polyfills\"\n\nimport { Search, SearchIndexConfig } from \"../../_\"\nimport {\n SearchMessage,\n SearchMessageType\n} from \"../message\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Add support for usage with `iframe-worker` polyfill\n *\n * While `importScripts` is synchronous when executed inside of a web worker,\n * it's not possible to provide a synchronous polyfilled implementation. The\n * cool thing is that awaiting a non-Promise is a noop, so extending the type\n * definition to return a `Promise` shouldn't break anything.\n *\n * @see https://bit.ly/2PjDnXi - GitHub comment\n */\ndeclare global {\n function importScripts(...urls: string[]): Promise | void\n}\n\n/* ----------------------------------------------------------------------------\n * Data\n * ------------------------------------------------------------------------- */\n\n/**\n * Search index\n */\nlet index: Search\n\n/* ----------------------------------------------------------------------------\n * Helper functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Fetch (= import) multi-language support through `lunr-languages`\n *\n * This function automatically imports the stemmers necessary to process the\n * languages, which are defined through the search index configuration.\n *\n * If the worker runs inside of an `iframe` (when using `iframe-worker` as\n * a shim), the base URL for the stemmers to be loaded must be determined by\n * searching for the first `script` element with a `src` attribute, which will\n * contain the contents of this script.\n *\n * @param config - Search index configuration\n *\n * @returns Promise resolving with no result\n */\nasync function setupSearchLanguages(\n config: SearchIndexConfig\n): Promise {\n let base = \"../lunr\"\n\n /* Detect `iframe-worker` and fix base URL */\n if (typeof parent !== \"undefined\" && \"IFrameWorker\" in parent) {\n const worker = document.querySelector(\"script[src]\")!\n const [path] = worker.src.split(\"/worker\")\n\n /* Prefix base with path */\n base = base.replace(\"..\", path)\n }\n\n /* Add scripts for languages */\n const scripts = []\n for (const lang of config.lang) {\n switch (lang) {\n\n /* Add segmenter for Japanese */\n case \"ja\":\n scripts.push(`${base}/tinyseg.js`)\n break\n\n /* Add segmenter for Hindi and Thai */\n case \"hi\":\n case \"th\":\n scripts.push(`${base}/wordcut.js`)\n break\n }\n\n /* Add language support */\n if (lang !== \"en\")\n scripts.push(`${base}/min/lunr.${lang}.min.js`)\n }\n\n /* Add multi-language support */\n if (config.lang.length > 1)\n scripts.push(`${base}/min/lunr.multi.min.js`)\n\n /* Load scripts synchronously */\n if (scripts.length)\n await importScripts(\n `${base}/min/lunr.stemmer.support.min.js`,\n ...scripts\n )\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Message handler\n *\n * @param message - Source message\n *\n * @returns Target message\n */\nexport async function handler(\n message: SearchMessage\n): Promise {\n switch (message.type) {\n\n /* Search setup message */\n case SearchMessageType.SETUP:\n await setupSearchLanguages(message.data.config)\n index = new Search(message.data)\n return {\n type: SearchMessageType.READY\n }\n\n /* Search query message */\n case SearchMessageType.QUERY:\n return {\n type: SearchMessageType.RESULT,\n data: index ? index.search(message.data) : { items: [] }\n }\n\n /* All other messages */\n default:\n throw new TypeError(\"Invalid message type\")\n }\n}\n\n/* ----------------------------------------------------------------------------\n * Worker\n * ------------------------------------------------------------------------- */\n\n/* @ts-expect-error - expose Lunr.js in global scope, or stemmers won't work */\nself.lunr = lunr\n\n/* Handle messages */\naddEventListener(\"message\", async ev => {\n postMessage(await handler(ev.data))\n})\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\n/* ----------------------------------------------------------------------------\n * Polyfills\n * ------------------------------------------------------------------------- */\n\n/* Polyfill `Object.entries` */\nif (!Object.entries)\n Object.entries = function (obj: object) {\n const data: [string, string][] = []\n for (const key of Object.keys(obj))\n // @ts-expect-error - ignore property access warning\n data.push([key, obj[key]])\n\n /* Return entries */\n return data\n }\n\n/* Polyfill `Object.values` */\nif (!Object.values)\n Object.values = function (obj: object) {\n const data: string[] = []\n for (const key of Object.keys(obj))\n // @ts-expect-error - ignore property access warning\n data.push(obj[key])\n\n /* Return values */\n return data\n }\n\n/* ------------------------------------------------------------------------- */\n\n/* Polyfills for `Element` */\nif (typeof Element !== \"undefined\") {\n\n /* Polyfill `Element.scrollTo` */\n if (!Element.prototype.scrollTo)\n Element.prototype.scrollTo = function (\n x?: ScrollToOptions | number, y?: number\n ): void {\n if (typeof x === \"object\") {\n this.scrollLeft = x.left!\n this.scrollTop = x.top!\n } else {\n this.scrollLeft = x!\n this.scrollTop = y!\n }\n }\n\n /* Polyfill `Element.replaceWith` */\n if (!Element.prototype.replaceWith)\n Element.prototype.replaceWith = function (\n ...nodes: Array\n ): void {\n const parent = this.parentNode\n if (parent) {\n if (nodes.length === 0)\n parent.removeChild(this)\n\n /* Replace children and create text nodes */\n for (let i = nodes.length - 1; i >= 0; i--) {\n let node = nodes[i]\n if (typeof node === \"string\")\n node = document.createTextNode(node)\n else if (node.parentNode)\n node.parentNode.removeChild(node)\n\n /* Replace child or insert before previous sibling */\n if (!i)\n parent.replaceChild(node, this)\n else\n parent.insertBefore(this.previousSibling!, node)\n }\n }\n }\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport escapeHTML from \"escape-html\"\n\nimport { SearchIndexDocument } from \"../_\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Search document\n */\nexport interface SearchDocument extends SearchIndexDocument {\n parent?: SearchIndexDocument /* Parent article */\n}\n\n/* ------------------------------------------------------------------------- */\n\n/**\n * Search document mapping\n */\nexport type SearchDocumentMap = Map\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Create a search document mapping\n *\n * @param docs - Search index documents\n *\n * @returns Search document map\n */\nexport function setupSearchDocumentMap(\n docs: SearchIndexDocument[]\n): SearchDocumentMap {\n const documents = new Map()\n const parents = new Set()\n for (const doc of docs) {\n const [path, hash] = doc.location.split(\"#\")\n\n /* Extract location, title and tags */\n const location = doc.location\n const title = doc.title\n const tags = doc.tags\n\n /* Escape and cleanup text */\n const text = escapeHTML(doc.text)\n .replace(/\\s+(?=[,.:;!?])/g, \"\")\n .replace(/\\s+/g, \" \")\n\n /* Handle section */\n if (hash) {\n const parent = documents.get(path)!\n\n /* Ignore first section, override article */\n if (!parents.has(parent)) {\n parent.title = doc.title\n parent.text = text\n\n /* Remember that we processed the article */\n parents.add(parent)\n\n /* Add subsequent section */\n } else {\n documents.set(location, {\n location,\n title,\n text,\n parent\n })\n }\n\n /* Add article */\n } else {\n documents.set(location, {\n location,\n title,\n text,\n ...tags && { tags }\n })\n }\n }\n return documents\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport escapeHTML from \"escape-html\"\n\nimport { SearchIndexConfig } from \"../_\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Search highlight function\n *\n * @param value - Value\n *\n * @returns Highlighted value\n */\nexport type SearchHighlightFn = (value: string) => string\n\n/**\n * Search highlight factory function\n *\n * @param query - Query value\n *\n * @returns Search highlight function\n */\nexport type SearchHighlightFactoryFn = (query: string) => SearchHighlightFn\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Create a search highlighter\n *\n * @param config - Search index configuration\n * @param escape - Whether to escape HTML\n *\n * @returns Search highlight factory function\n */\nexport function setupSearchHighlighter(\n config: SearchIndexConfig, escape: boolean\n): SearchHighlightFactoryFn {\n const separator = new RegExp(config.separator, \"img\")\n const highlight = (_: unknown, data: string, term: string) => {\n return `${data}${term}`\n }\n\n /* Return factory function */\n return (query: string) => {\n query = query\n .replace(/[\\s*+\\-:~^]+/g, \" \")\n .trim()\n\n /* Create search term match expression */\n const match = new RegExp(`(^|${config.separator})(${\n query\n .replace(/[|\\\\{}()[\\]^$+*?.-]/g, \"\\\\$&\")\n .replace(separator, \"|\")\n })`, \"img\")\n\n /* Highlight string value */\n return value => (\n escape\n ? escapeHTML(value)\n : value\n )\n .replace(match, highlight)\n .replace(/<\\/mark>(\\s+)]*>/img, \"$1\")\n }\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Search query clause\n */\nexport interface SearchQueryClause {\n presence: lunr.Query.presence /* Clause presence */\n term: string /* Clause term */\n}\n\n/* ------------------------------------------------------------------------- */\n\n/**\n * Search query terms\n */\nexport type SearchQueryTerms = Record\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Parse a search query for analysis\n *\n * @param value - Query value\n *\n * @returns Search query clauses\n */\nexport function parseSearchQuery(\n value: string\n): SearchQueryClause[] {\n const query = new (lunr as any).Query([\"title\", \"text\"])\n const parser = new (lunr as any).QueryParser(value, query)\n\n /* Parse and return query clauses */\n parser.parse()\n return query.clauses\n}\n\n/**\n * Analyze the search query clauses in regard to the search terms found\n *\n * @param query - Search query clauses\n * @param terms - Search terms\n *\n * @returns Search query terms\n */\nexport function getSearchQueryTerms(\n query: SearchQueryClause[], terms: string[]\n): SearchQueryTerms {\n const clauses = new Set(query)\n\n /* Match query clauses against terms */\n const result: SearchQueryTerms = {}\n for (let t = 0; t < terms.length; t++)\n for (const clause of clauses)\n if (terms[t].startsWith(clause.term)) {\n result[clause.term] = true\n clauses.delete(clause)\n }\n\n /* Annotate unmatched non-stopword query clauses */\n for (const clause of clauses)\n if (lunr.stopWordFilter?.(clause.term as any))\n result[clause.term] = false\n\n /* Return query terms */\n return result\n}\n", "/*\n * Copyright (c) 2016-2022 Martin Donath \n *\n * Permission is hereby granted, free of charge, to any person obtaining a copy\n * of this software and associated documentation files (the \"Software\"), to\n * deal in the Software without restriction, including without limitation the\n * rights to use, copy, modify, merge, publish, distribute, sublicense, and/or\n * sell copies of the Software, and to permit persons to whom the Software is\n * furnished to do so, subject to the following conditions:\n *\n * The above copyright notice and this permission notice shall be included in\n * all copies or substantial portions of the Software.\n *\n * THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n * FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE\n * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING\n * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS\n * IN THE SOFTWARE.\n */\n\nimport {\n SearchDocument,\n SearchDocumentMap,\n setupSearchDocumentMap\n} from \"../document\"\nimport {\n SearchHighlightFactoryFn,\n setupSearchHighlighter\n} from \"../highlighter\"\nimport { SearchOptions } from \"../options\"\nimport {\n SearchQueryTerms,\n getSearchQueryTerms,\n parseSearchQuery\n} from \"../query\"\n\n/* ----------------------------------------------------------------------------\n * Types\n * ------------------------------------------------------------------------- */\n\n/**\n * Search index configuration\n */\nexport interface SearchIndexConfig {\n lang: string[] /* Search languages */\n separator: string /* Search separator */\n}\n\n/**\n * Search index document\n */\nexport interface SearchIndexDocument {\n location: string /* Document location */\n title: string /* Document title */\n text: string /* Document text */\n tags?: string[] /* Document tags */\n boost?: number /* Document boost */\n}\n\n/* ------------------------------------------------------------------------- */\n\n/**\n * Search index\n *\n * This interfaces describes the format of the `search_index.json` file which\n * is automatically built by the MkDocs search plugin.\n */\nexport interface SearchIndex {\n config: SearchIndexConfig /* Search index configuration */\n docs: SearchIndexDocument[] /* Search index documents */\n options: SearchOptions /* Search options */\n}\n\n/* ------------------------------------------------------------------------- */\n\n/**\n * Search metadata\n */\nexport interface SearchMetadata {\n score: number /* Score (relevance) */\n terms: SearchQueryTerms /* Search query terms */\n}\n\n/* ------------------------------------------------------------------------- */\n\n/**\n * Search result document\n */\nexport type SearchResultDocument = SearchDocument & SearchMetadata\n\n/**\n * Search result item\n */\nexport type SearchResultItem = SearchResultDocument[]\n\n/* ------------------------------------------------------------------------- */\n\n/**\n * Search result\n */\nexport interface SearchResult {\n items: SearchResultItem[] /* Search result items */\n suggestions?: string[] /* Search suggestions */\n}\n\n/* ----------------------------------------------------------------------------\n * Functions\n * ------------------------------------------------------------------------- */\n\n/**\n * Compute the difference of two lists of strings\n *\n * @param a - 1st list of strings\n * @param b - 2nd list of strings\n *\n * @returns Difference\n */\nfunction difference(a: string[], b: string[]): string[] {\n const [x, y] = [new Set(a), new Set(b)]\n return [\n ...new Set([...x].filter(value => !y.has(value)))\n ]\n}\n\n/* ----------------------------------------------------------------------------\n * Class\n * ------------------------------------------------------------------------- */\n\n/**\n * Search index\n */\nexport class Search {\n\n /**\n * Search document mapping\n *\n * A mapping of URLs (including hash fragments) to the actual articles and\n * sections of the documentation. The search document mapping must be created\n * regardless of whether the index was prebuilt or not, as Lunr.js itself\n * only stores the actual index.\n */\n protected documents: SearchDocumentMap\n\n /**\n * Search highlight factory function\n */\n protected highlight: SearchHighlightFactoryFn\n\n /**\n * The underlying Lunr.js search index\n */\n protected index: lunr.Index\n\n /**\n * Search options\n */\n protected options: SearchOptions\n\n /**\n * Create the search integration\n *\n * @param data - Search index\n */\n public constructor({ config, docs, options }: SearchIndex) {\n this.options = options\n\n /* Set up document map and highlighter factory */\n this.documents = setupSearchDocumentMap(docs)\n this.highlight = setupSearchHighlighter(config, false)\n\n /* Set separator for tokenizer */\n lunr.tokenizer.separator = new RegExp(config.separator)\n\n /* Create search index */\n this.index = lunr(function () {\n\n /* Set up multi-language support */\n if (config.lang.length === 1 && config.lang[0] !== \"en\") {\n this.use((lunr as any)[config.lang[0]])\n } else if (config.lang.length > 1) {\n this.use((lunr as any).multiLanguage(...config.lang))\n }\n\n /* Compute functions to be removed from the pipeline */\n const fns = difference([\n \"trimmer\", \"stopWordFilter\", \"stemmer\"\n ], options.pipeline)\n\n /* Remove functions from the pipeline for registered languages */\n for (const lang of config.lang.map(language => (\n language === \"en\" ? lunr : (lunr as any)[language]\n ))) {\n for (const fn of fns) {\n this.pipeline.remove(lang[fn])\n this.searchPipeline.remove(lang[fn])\n }\n }\n\n /* Set up reference */\n this.ref(\"location\")\n\n /* Set up fields */\n this.field(\"title\", { boost: 1e3 })\n this.field(\"text\")\n this.field(\"tags\", { boost: 1e6, extractor: doc => {\n const { tags = [] } = doc as SearchDocument\n return tags.reduce((list, tag) => [\n ...list,\n ...lunr.tokenizer(tag)\n ], [] as lunr.Token[])\n } })\n\n /* Index documents */\n for (const doc of docs)\n this.add(doc, { boost: doc.boost })\n })\n }\n\n /**\n * Search for matching documents\n *\n * The search index which MkDocs provides is divided up into articles, which\n * contain the whole content of the individual pages, and sections, which only\n * contain the contents of the subsections obtained by breaking the individual\n * pages up at `h1` ... `h6`. As there may be many sections on different pages\n * with identical titles (for example within this very project, e.g. \"Usage\"\n * or \"Installation\"), they need to be put into the context of the containing\n * page. For this reason, section results are grouped within their respective\n * articles which are the top-level results that are returned.\n *\n * @param query - Query value\n *\n * @returns Search results\n */\n public search(query: string): SearchResult {\n if (query) {\n try {\n const highlight = this.highlight(query)\n\n /* Parse query to extract clauses for analysis */\n const clauses = parseSearchQuery(query)\n .filter(clause => (\n clause.presence !== lunr.Query.presence.PROHIBITED\n ))\n\n /* Perform search and post-process results */\n const groups = this.index.search(`${query}*`)\n\n /* Apply post-query boosts based on title and search query terms */\n .reduce((item, { ref, score, matchData }) => {\n const document = this.documents.get(ref)\n if (typeof document !== \"undefined\") {\n const { location, title, text, tags, parent } = document\n\n /* Compute and analyze search query terms */\n const terms = getSearchQueryTerms(\n clauses,\n Object.keys(matchData.metadata)\n )\n\n /* Highlight title and text and apply post-query boosts */\n const boost = +!parent + +Object.values(terms).every(t => t)\n item.push({\n location,\n title: highlight(title),\n text: highlight(text),\n ...tags && { tags: tags.map(highlight) },\n score: score * (1 + boost),\n terms\n })\n }\n return item\n }, [])\n\n /* Sort search results again after applying boosts */\n .sort((a, b) => b.score - a.score)\n\n /* Group search results by page */\n .reduce((items, result) => {\n const document = this.documents.get(result.location)\n if (typeof document !== \"undefined\") {\n const ref = \"parent\" in document\n ? document.parent!.location\n : document.location\n items.set(ref, [...items.get(ref) || [], result])\n }\n return items\n }, new Map())\n\n /* Generate search suggestions, if desired */\n let suggestions: string[] | undefined\n if (this.options.suggestions) {\n const titles = this.index.query(builder => {\n for (const clause of clauses)\n builder.term(clause.term, {\n fields: [\"title\"],\n presence: lunr.Query.presence.REQUIRED,\n wildcard: lunr.Query.wildcard.TRAILING\n })\n })\n\n /* Retrieve suggestions for best match */\n suggestions = titles.length\n ? Object.keys(titles[0].matchData.metadata)\n : []\n }\n\n /* Return items and suggestions */\n return {\n items: [...groups.values()],\n ...typeof suggestions !== \"undefined\" && { suggestions }\n }\n\n /* Log errors to console (for now) */\n } catch {\n console.warn(`Invalid query: ${query} \u2013 see https://bit.ly/2s3ChXG`)\n }\n }\n\n /* Return nothing in case of error or empty query */\n return { items: [] }\n }\n}\n"], - "mappings": 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\ No newline at end of file diff --git a/pr-preview/pr-11/causal_associations/index.html b/pr-preview/pr-11/causal_associations/index.html deleted file mode 100644 index 75e8cf8..0000000 --- a/pr-preview/pr-11/causal_associations/index.html +++ /dev/null @@ -1,421 +0,0 @@ - - - - - - - - - - - - - - - - - - Slot: causal_associations - gocam - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
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    Slot: causal_associations

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    The causal associations that connect this activity to other activities

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    URI: gocam:causal_associations

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    ActivityAn individual activity in a causal model, representing the individual molecul...no
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    name: causal_associations
-description: The causal associations that connect this activity to other activities
-from_schema: https://w3id.org/gocam
-rank: 1000
-multivalued: true
-alias: causal_associations
-owner: Activity
-domain_of:
-- Activity
-range: CausalAssociation
-inlined: true
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    Comments about the model

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    ModelA model of a biological program consisting of a set of causally connected act...no
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-description: Comments about the model
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-rank: 1000
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-alias: comments
-owner: Model
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    ProvenanceInfoProvenance information for an objectno
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-from_schema: https://w3id.org/gocam
-rank: 1000
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    ProvenanceInfoProvenance information for an objectno
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-from_schema: https://w3id.org/gocam
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    ProvenanceInfoProvenance information for an objectno
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    name: date
-from_schema: https://w3id.org/gocam
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-slot_uri: dct:date
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    The activity unit that is downstream of this one

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    NameDescriptionModifies Slot
    CausalAssociationA causal association between two activitiesno
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    name: downstream_activity
-description: The activity unit that is downstream of this one
-from_schema: https://w3id.org/gocam
-aliases:
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-rank: 1000
-alias: downstream_activity
-owner: CausalAssociation
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-range: Activity
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    The gene product or complex that carries out the activity

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    URI: gocam:enabled_by

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    NameDescriptionModifies Slot
    ActivityAn individual activity in a causal model, representing the individual molecul...no
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    name: enabled_by
-description: The gene product or complex that carries out the activity
-from_schema: https://w3id.org/gocam
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-alias: enabled_by
-owner: Activity
-domain_of:
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-range: EnabledByAssociation
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    - - - - - - - - - - \ No newline at end of file diff --git a/pr-preview/pr-11/evidence/index.html b/pr-preview/pr-11/evidence/index.html deleted file mode 100644 index a211c6b..0000000 --- a/pr-preview/pr-11/evidence/index.html +++ /dev/null @@ -1,473 +0,0 @@ - - - - - - - - - - - - - - - - - - Slot: evidence - gocam - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
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    NameDescriptionModifies Slot
    AssociationAn abstract grouping for different kinds of evidence-associated provenanceno
    EnabledByProteinComplexAssociationAn association between an activity and a protein complexno
    TermAssociationAn association between an activity and a term, potentially with extensionsno
    EnabledByGeneProductAssociationAn association between an activity and a gene productno
    MolecularFunctionAssociationAn association between an activity and a molecular function termno
    EnabledByAssociationAn association between an activity and the gene product or complex that carri...no
    BiologicalProcessAssociationAn association between an activity and a biological process termno
    MoleculeAssociationAn association between an activity and a molecule termno
    GrossAnatomyAssociationAn association between an activity and a gross anatomical structure termno
    CellularAnatomicalEntityAssociationAn association between an activity and a cellular anatomical entity termno
    CellTypeAssociationAn association between an activity and a cell type termno
    CausalAssociationA causal association between two activitiesno
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    name: evidence
-from_schema: https://w3id.org/gocam
-rank: 1000
-multivalued: true
-alias: evidence
-owner: Association
-domain_of:
-- Association
-range: EvidenceItem
-inlined: true
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    PublicationObjectAn object that represents a publication or other kind of referenceno
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    name: full_text
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    gocam

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    GO CAM LinkML schema (experimental)

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    The central class in this datamodel is a Model. A model consists of a set of -Activity objects.

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    URI: https://w3id.org/gocam

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    NameDescriptionModifies Slot
    PublicationObjectAn object that represents a publication or other kind of referenceno
    CellTypeTermObjectA term object that represents a cell type term from CLno
    MolecularFunctionTermObjectA term object that represents a molecular function term from GOno
    MoleculeTermObjectA term object that represents a molecule term from CHEBI or UniProtKBno
    TaxonTermObjectA term object that represents a taxon term from NCBITaxonno
    ObjectAn abstract class for all identified objects in a modelno
    BiologicalProcessTermObjectA term object that represents a biological process term from GOno
    InformationBiomacromoleculeTermObjectAn abstract class for all information biomacromolecule term objectsno
    GeneProductTermObjectA term object that represents a gene product term from GO or UniProtKBno
    ModelA model of a biological program consisting of a set of causally connected act...no
    PhaseTermObjectA term object that represents a phase term from GO or UBERONno
    ActivityAn individual activity in a causal model, representing the individual molecul...no
    TermObjectAn abstract class for all ontology term objectsno
    ProteinComplexTermObjectA term object that represents a protein complex term from GOno
    GrossAnatomicalStructureTermObjectA term object that represents a gross anatomical structure term from UBERONno
    PredicateTermObjectA term object that represents a taxon term from NCBITaxonno
    EvidenceTermObjectA term object that represents an evidence term from ECOno
    CellularAnatomicalEntityTermObjectA term object that represents a cellular anatomical entity term from GOno
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    name: id
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-domain_of:
-- Model
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    gocam

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    GO CAM LinkML schema (experimental)

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    The central class in this datamodel is a Model. A model consists of a set of -Activity objects.

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    URI: https://w3id.org/gocam

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    Name: gocam

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    Classes

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    ClassDescription
    ActivityAn individual activity in a causal model, representing the individual molecular activity of a single gene product or complex in the context of a particular model
    AssociationAn abstract grouping for different kinds of evidence-associated provenance
            CausalAssociationA causal association between two activities
            EnabledByAssociationAn association between an activity and the gene product or complex that carries it out
                    EnabledByGeneProductAssociationAn association between an activity and a gene product
                    EnabledByProteinComplexAssociationAn association between an activity and a protein complex
            TermAssociationAn association between an activity and a term, potentially with extensions
                    BiologicalProcessAssociationAn association between an activity and a biological process term
                    CellTypeAssociationAn association between an activity and a cell type term
                    CellularAnatomicalEntityAssociationAn association between an activity and a cellular anatomical entity term
                    GrossAnatomyAssociationAn association between an activity and a gross anatomical structure term
                    MolecularFunctionAssociationAn association between an activity and a molecular function term
                    MoleculeAssociationAn association between an activity and a molecule term
    EvidenceItemAn individual piece of evidence that is associated with an assertion in a model
    ModelA model of a biological program consisting of a set of causally connected activities
    ObjectAn abstract class for all identified objects in a model
            PublicationObjectAn object that represents a publication or other kind of reference
            TermObjectAn abstract class for all ontology term objects
                    BiologicalProcessTermObjectA term object that represents a biological process term from GO
                    CellTypeTermObjectA term object that represents a cell type term from CL
                    CellularAnatomicalEntityTermObjectA term object that represents a cellular anatomical entity term from GO
                    EvidenceTermObjectA term object that represents an evidence term from ECO
                    GrossAnatomicalStructureTermObjectA term object that represents a gross anatomical structure term from UBERON
                    InformationBiomacromoleculeTermObjectAn abstract class for all information biomacromolecule term objects
                            GeneProductTermObjectA term object that represents a gene product term from GO or UniProtKB
                            ProteinComplexTermObjectA term object that represents a protein complex term from GO
                    MolecularFunctionTermObjectA term object that represents a molecular function term from GO
                    MoleculeTermObjectA term object that represents a molecule term from CHEBI or UniProtKB
                    PhaseTermObjectA term object that represents a phase term from GO or UBERON
                    PredicateTermObjectA term object that represents a taxon term from NCBITaxon
                    TaxonTermObjectA term object that represents a taxon term from NCBITaxon
    ProvenanceInfoProvenance information for an object
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    SlotDescription
    abstract_text
    activitiesAll of the activities that are part of the model
    causal_associationsThe causal associations that connect this activity to other activities
    commentsComments about the model
    contributor
    created
    date
    downstream_activityThe activity unit that is downstream of this one
    enabled_byThe gene product or complex that carries out the activity
    evidence
    full_text
    has_inputThe input molecules that are directly consumed by the activity
    has_outputThe output molecules that are directly produced by the activity
    has_primary_inputThe primary input molecule that is directly consumed by the activity
    has_primary_outputThe primary output molecule that is directly produced by the activity
    idThe identifier of the model
    label
    membersThe gene products that are part of the complex
    molecular_functionThe molecular function that is carried out by the gene product or complex
    objectsAll of the objects that are part of the model
    obsolete
    occurs_inThe cellular location in which the activity occurs
    part_ofThe larger biological process in which the activity is a part
    predicateThe RO relation that represents the type of relationship
    provenancesModel-level provenance information
    provided_by
    referenceThe publication of reference that describes the evidence
    statusThe status of the model
    taxonThe primary taxon that the model is about
    termThe ECO term representing the type of evidence
    titleThe human-readable descriptive title of the model
    type
    with_objectsSupporting database entities or terms
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    CausalPredicateEnum
    InformationBiomacromoleculeCategory
    ModelStateEnumStatus of a model
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    BooleanA binary (true or false) value
    Curiea compact URI
    Datea date (year, month and day) in an idealized calendar
    DateOrDatetimeEither a date or a datetime
    DatetimeThe combination of a date and time
    DecimalA real number with arbitrary precision that conforms to the xsd:decimal speci...
    DoubleA real number that conforms to the xsd:double specification
    FloatA real number that conforms to the xsd:float specification
    IntegerAn integer
    JsonpathA string encoding a JSON Path
    JsonpointerA string encoding a JSON Pointer
    NcnamePrefix part of CURIE
    NodeidentifierA URI, CURIE or BNODE that represents a node in a model
    ObjectidentifierA URI or CURIE that represents an object in the model
    SparqlpathA string encoding a SPARQL Property Path
    StringA character string
    TimeA time object represents a (local) time of day, independent of any particular...
    Uria complete URI
    Uriorcuriea URI or a CURIE
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    PublicationObjectAn object that represents a publication or other kind of referenceno
    CellTypeTermObjectA term object that represents a cell type term from CLno
    MolecularFunctionTermObjectA term object that represents a molecular function term from GOno
    MoleculeTermObjectA term object that represents a molecule term from CHEBI or UniProtKBno
    TaxonTermObjectA term object that represents a taxon term from NCBITaxonno
    ObjectAn abstract class for all identified objects in a modelno
    BiologicalProcessTermObjectA term object that represents a biological process term from GOno
    InformationBiomacromoleculeTermObjectAn abstract class for all information biomacromolecule term objectsno
    GeneProductTermObjectA term object that represents a gene product term from GO or UniProtKBno
    PhaseTermObjectA term object that represents a phase term from GO or UBERONno
    TermObjectAn abstract class for all ontology term objectsno
    ProteinComplexTermObjectA term object that represents a protein complex term from GOno
    GrossAnatomicalStructureTermObjectA term object that represents a gross anatomical structure term from UBERONno
    PredicateTermObjectA term object that represents a taxon term from NCBITaxonno
    EvidenceTermObjectA term object that represents an evidence term from ECOno
    CellularAnatomicalEntityTermObjectA term object that represents a cellular anatomical entity term from GOno
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    The gene products that are part of the complex

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    EnabledByProteinComplexAssociationAn association between an activity and a protein complexno
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    The molecular function that is carried out by the gene product or complex

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    ActivityAn individual activity in a causal model, representing the individual molecul...no
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    All of the objects that are part of the model. This includes terms as well as publications and database objects like gene. This is not strictly part of the data managed by the model, it is for convenience, and should be refreshed from outside.

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    ModelA model of a biological program consisting of a set of causally connected act...no
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    NameDescriptionModifies Slot
    PublicationObjectAn object that represents a publication or other kind of referenceno
    CellTypeTermObjectA term object that represents a cell type term from CLno
    MolecularFunctionTermObjectA term object that represents a molecular function term from GOno
    MoleculeTermObjectA term object that represents a molecule term from CHEBI or UniProtKBno
    TaxonTermObjectA term object that represents a taxon term from NCBITaxonno
    ObjectAn abstract class for all identified objects in a modelno
    BiologicalProcessTermObjectA term object that represents a biological process term from GOno
    InformationBiomacromoleculeTermObjectAn abstract class for all information biomacromolecule term objectsno
    GeneProductTermObjectA term object that represents a gene product term from GO or UniProtKBno
    PhaseTermObjectA term object that represents a phase term from GO or UBERONno
    TermObjectAn abstract class for all ontology term objectsno
    ProteinComplexTermObjectA term object that represents a protein complex term from GOno
    GrossAnatomicalStructureTermObjectA term object that represents a gross anatomical structure term from UBERONno
    PredicateTermObjectA term object that represents a taxon term from NCBITaxonno
    EvidenceTermObjectA term object that represents an evidence term from ECOno
    CellularAnatomicalEntityTermObjectA term object that represents a cellular anatomical entity term from GOno
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    ActivityAn individual activity in a causal model, representing the individual molecul...no
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    CausalAssociationA causal association between two activitiesno
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    AssociationAn abstract grouping for different kinds of evidence-associated provenanceno
    EnabledByProteinComplexAssociationAn association between an activity and a protein complexno
    TermAssociationAn association between an activity and a term, potentially with extensionsno
    EnabledByGeneProductAssociationAn association between an activity and a gene productno
    MolecularFunctionAssociationAn association between an activity and a molecular function termno
    EnabledByAssociationAn association between an activity and the gene product or complex that carri...no
    BiologicalProcessAssociationAn association between an activity and a biological process termno
    MoleculeAssociationAn association between an activity and a molecule termno
    EvidenceItemAn individual piece of evidence that is associated with an assertion in a mod...no
    ModelA model of a biological program consisting of a set of causally connected act...no
    GrossAnatomyAssociationAn association between an activity and a gross anatomical structure termno
    ActivityAn individual activity in a causal model, representing the individual molecul...no
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    CausalAssociationA causal association between two activitiesno
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    The publication of reference that describes the evidence

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    NameDescriptionModifies Slot
    EvidenceItemAn individual piece of evidence that is associated with an assertion in a mod...no
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    name: reference
-description: The publication of reference that describes the evidence
-from_schema: https://w3id.org/gocam
-rank: 1000
-alias: reference
-owner: EvidenceItem
-domain_of:
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URI: https://w3id.org/gocam Name: gocam Classes Class Description Activity An individual activity in a causal model, representing the individual molecular activity of a single gene product or complex in the context of a particular model Association An abstract grouping for different kinds of evidence-associated provenance CausalAssociation A causal association between two activities EnabledByAssociation An association between an activity and the gene product or complex that carries it out EnabledByGeneProductAssociation An association between an activity and a gene product EnabledByProteinComplexAssociation An association between an activity and a protein complex TermAssociation An association between an activity and a term, potentially with extensions BiologicalProcessAssociation An association between an activity and a biological process term CellTypeAssociation An association between an activity and a cell type term CellularAnatomicalEntityAssociation An association between an activity and a cellular anatomical entity term GrossAnatomyAssociation An association between an activity and a gross anatomical structure term MolecularFunctionAssociation An association between an activity and a molecular function term MoleculeAssociation An association between an activity and a molecule term EvidenceItem An individual piece of evidence that is associated with an assertion in a model Model A model of a biological program consisting of a set of causally connected activities Object An abstract class for all identified objects in a model PublicationObject An object that represents a publication or other kind of reference TermObject An abstract class for all ontology term objects BiologicalProcessTermObject A term object that represents a biological process term from GO CellTypeTermObject A term object that represents a cell type term from CL CellularAnatomicalEntityTermObject A term object that represents a cellular anatomical entity term from GO EvidenceTermObject A term object that represents an evidence term from ECO GrossAnatomicalStructureTermObject A term object that represents a gross anatomical structure term from UBERON InformationBiomacromoleculeTermObject An abstract class for all information biomacromolecule term objects GeneProductTermObject A term object that represents a gene product term from GO or UniProtKB ProteinComplexTermObject A term object that represents a protein complex term from GO MolecularFunctionTermObject A term object that represents a molecular function term from GO MoleculeTermObject A term object that represents a molecule term from CHEBI or UniProtKB PhaseTermObject A term object that represents a phase term from GO or UBERON PredicateTermObject A term object that represents a taxon term from NCBITaxon TaxonTermObject A term object that represents a taxon term from NCBITaxon ProvenanceInfo Provenance information for an object Slots Slot Description abstract_text activities All of the activities that are part of the model causal_associations The causal associations that connect this activity to other activities comments Comments about the model contributor created date downstream_activity The activity unit that is downstream of this one enabled_by The gene product or complex that carries out the activity evidence full_text has_input The input molecules that are directly consumed by the activity has_output The output molecules that are directly produced by the activity has_primary_input The primary input molecule that is directly consumed by the activity has_primary_output The primary output molecule that is directly produced by the activity id The identifier of the model label members The gene products that are part of the complex molecular_function The molecular function that is carried out by the gene product or complex objects All of the objects that are part of the model obsolete occurs_in The cellular location in which the activity occurs part_of The larger biological process in which the activity is a part predicate The RO relation that represents the type of relationship provenances Model-level provenance information provided_by reference The publication of reference that describes the evidence status The status of the model taxon The primary taxon that the model is about term The ECO term representing the type of evidence title The human-readable descriptive title of the model type with_objects Supporting database entities or terms Enumerations Enumeration Description CausalPredicateEnum InformationBiomacromoleculeCategory ModelStateEnum Status of a model Types Type Description Boolean A binary (true or false) value Curie a compact URI Date a date (year, month and day) in an idealized calendar DateOrDatetime Either a date or a datetime Datetime The combination of a date and time Decimal A real number with arbitrary precision that conforms to the xsd:decimal speci... Double A real number that conforms to the xsd:double specification Float A real number that conforms to the xsd:float specification Integer An integer Jsonpath A string encoding a JSON Path Jsonpointer A string encoding a JSON Pointer Ncname Prefix part of CURIE Nodeidentifier A URI, CURIE or BNODE that represents a node in a model Objectidentifier A URI or CURIE that represents an object in the model Sparqlpath A string encoding a SPARQL Property Path String A character string Time A time object represents a (local) time of day, independent of any particular... Uri a complete URI Uriorcurie a URI or a CURIE Subsets Subset Description","title":"Index"},{"location":"#gocam","text":"GO CAM LinkML schema (experimental) The central class in this datamodel is a Model . A model consists of a set of Activity objects. URI: https://w3id.org/gocam Name: gocam","title":"gocam"},{"location":"#classes","text":"Class Description Activity An individual activity in a causal model, representing the individual molecular activity of a single gene product or complex in the context of a particular model Association An abstract grouping for different kinds of evidence-associated provenance CausalAssociation A causal association between two activities EnabledByAssociation An association between an activity and the gene product or complex that carries it out EnabledByGeneProductAssociation An association between an activity and a gene product EnabledByProteinComplexAssociation An association between an activity and a protein complex TermAssociation An association between an activity and a term, potentially with extensions BiologicalProcessAssociation An association between an activity and a biological process term CellTypeAssociation An association between an activity and a cell type term CellularAnatomicalEntityAssociation An association between an activity and a cellular anatomical entity term GrossAnatomyAssociation An association between an activity and a gross anatomical structure term MolecularFunctionAssociation An association between an activity and a molecular function term MoleculeAssociation An association between an activity and a molecule term EvidenceItem An individual piece of evidence that is associated with an assertion in a model Model A model of a biological program consisting of a set of causally connected activities Object An abstract class for all identified objects in a model PublicationObject An object that represents a publication or other kind of reference TermObject An abstract class for all ontology term objects BiologicalProcessTermObject A term object that represents a biological process term from GO CellTypeTermObject A term object that represents a cell type term from CL CellularAnatomicalEntityTermObject A term object that represents a cellular anatomical entity term from GO EvidenceTermObject A term object that represents an evidence term from ECO GrossAnatomicalStructureTermObject A term object that represents a gross anatomical structure term from UBERON InformationBiomacromoleculeTermObject An abstract class for all information biomacromolecule term objects GeneProductTermObject A term object that represents a gene product term from GO or UniProtKB ProteinComplexTermObject A term object that represents a protein complex term from GO MolecularFunctionTermObject A term object that represents a molecular function term from GO MoleculeTermObject A term object that represents a molecule term from CHEBI or UniProtKB PhaseTermObject A term object that represents a phase term from GO or UBERON PredicateTermObject A term object that represents a taxon term from NCBITaxon TaxonTermObject A term object that represents a taxon term from NCBITaxon ProvenanceInfo Provenance information for an object","title":"Classes"},{"location":"#slots","text":"Slot Description abstract_text activities All of the activities that are part of the model causal_associations The causal associations that connect this activity to other activities comments Comments about the model contributor created date downstream_activity The activity unit that is downstream of this one enabled_by The gene product or complex that carries out the activity evidence full_text has_input The input molecules that are directly consumed by the activity has_output The output molecules that are directly produced by the activity has_primary_input The primary input molecule that is directly consumed by the activity has_primary_output The primary output molecule that is directly produced by the activity id The identifier of the model label members The gene products that are part of the complex molecular_function The molecular function that is carried out by the gene product or complex objects All of the objects that are part of the model obsolete occurs_in The cellular location in which the activity occurs part_of The larger biological process in which the activity is a part predicate The RO relation that represents the type of relationship provenances Model-level provenance information provided_by reference The publication of reference that describes the evidence status The status of the model taxon The primary taxon that the model is about term The ECO term representing the type of evidence title The human-readable descriptive title of the model type with_objects Supporting database entities or terms","title":"Slots"},{"location":"#enumerations","text":"Enumeration Description CausalPredicateEnum InformationBiomacromoleculeCategory ModelStateEnum Status of a model","title":"Enumerations"},{"location":"#types","text":"Type Description Boolean A binary (true or false) value Curie a compact URI Date a date (year, month and day) in an idealized calendar DateOrDatetime Either a date or a datetime Datetime The combination of a date and time Decimal A real number with arbitrary precision that conforms to the xsd:decimal speci... Double A real number that conforms to the xsd:double specification Float A real number that conforms to the xsd:float specification Integer An integer Jsonpath A string encoding a JSON Path Jsonpointer A string encoding a JSON Pointer Ncname Prefix part of CURIE Nodeidentifier A URI, CURIE or BNODE that represents a node in a model Objectidentifier A URI or CURIE that represents an object in the model Sparqlpath A string encoding a SPARQL Property Path String A character string Time A time object represents a (local) time of day, independent of any particular... Uri a complete URI Uriorcurie a URI or a CURIE","title":"Types"},{"location":"#subsets","text":"Subset Description","title":"Subsets"},{"location":"Activity/","text":"Class: Activity An individual activity in a causal model, representing the individual molecular activity of a single gene product or complex in the context of a particular model URI: gocam:Activity classDiagram class Activity click Activity href \"../Activity\" Activity : causal_associations Activity --> \"*\" CausalAssociation : causal_associations click CausalAssociation href \"../CausalAssociation\" Activity : enabled_by Activity --> \"0..1\" EnabledByAssociation : enabled_by click EnabledByAssociation href \"../EnabledByAssociation\" Activity : has_input Activity --> \"*\" MoleculeAssociation : has_input click MoleculeAssociation href \"../MoleculeAssociation\" Activity : has_output Activity --> \"*\" MoleculeAssociation : has_output click MoleculeAssociation href \"../MoleculeAssociation\" Activity : has_primary_input Activity --> \"0..1\" MoleculeAssociation : has_primary_input click MoleculeAssociation href \"../MoleculeAssociation\" Activity : has_primary_output Activity --> \"0..1\" MoleculeAssociation : has_primary_output click MoleculeAssociation href \"../MoleculeAssociation\" Activity : id Activity : molecular_function Activity --> \"0..1\" MolecularFunctionAssociation : molecular_function click MolecularFunctionAssociation href \"../MolecularFunctionAssociation\" Activity : occurs_in Activity --> \"0..1\" CellularAnatomicalEntityAssociation : occurs_in click CellularAnatomicalEntityAssociation href \"../CellularAnatomicalEntityAssociation\" Activity : part_of Activity --> \"0..1\" BiologicalProcessAssociation : part_of click BiologicalProcessAssociation href \"../BiologicalProcessAssociation\" Activity : provenances Activity --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" Slots Name Cardinality and Range Description Inheritance id 1 Uriorcurie Identifier of the activity unit direct enabled_by 0..1 EnabledByAssociation The gene product or complex that carries out the activity direct molecular_function 0..1 MolecularFunctionAssociation The molecular function that is carried out by the gene product or complex direct occurs_in 0..1 CellularAnatomicalEntityAssociation The cellular location in which the activity occurs direct part_of 0..1 BiologicalProcessAssociation The larger biological process in which the activity is a part direct has_input * MoleculeAssociation The input molecules that are directly consumed by the activity direct has_primary_input 0..1 MoleculeAssociation The primary input molecule that is directly consumed by the activity direct has_output * MoleculeAssociation The output molecules that are directly produced by the activity direct has_primary_output 0..1 MoleculeAssociation The primary output molecule that is directly produced by the activity direct causal_associations * CausalAssociation The causal associations that connect this activity to other activities direct provenances * ProvenanceInfo Provenance information for the activity direct Usages used by used in type used Model activities range Activity CausalAssociation downstream_activity range Activity Aliases annoton Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:Activity native gocam:Activity LinkML Source Direct name: Activity description: An individual activity in a causal model, representing the individual molecular activity of a single gene product or complex in the context of a particular model from_schema: https://w3id.org/gocam aliases: - annoton attributes: id: name: id description: Identifier of the activity unit. Should be in gocam namespace. comments: - Typically does not need to be exposed to end-user, this exists to allow activity flows from_schema: https://w3id.org/gocam identifier: true domain_of: - Model - Activity - Object range: uriorcurie required: true enabled_by: name: enabled_by description: The gene product or complex that carries out the activity from_schema: https://w3id.org/gocam rank: 1000 domain_of: - Activity range: EnabledByAssociation inlined: true molecular_function: name: molecular_function description: The molecular function that is carried out by the gene product or complex todos: - currently BP, CC etc are at the level of the activity, not the MolecularFunctionAssociation from_schema: https://w3id.org/gocam rank: 1000 domain_of: - Activity range: MolecularFunctionAssociation inlined: true occurs_in: name: occurs_in description: The cellular location in which the activity occurs from_schema: https://w3id.org/gocam rank: 1000 domain_of: - Activity range: CellularAnatomicalEntityAssociation inlined: true part_of: name: part_of description: The larger biological process in which the activity is a part from_schema: https://w3id.org/gocam rank: 1000 domain_of: - Activity range: BiologicalProcessAssociation inlined: true has_input: name: has_input description: The input molecules that are directly consumed by the activity from_schema: https://w3id.org/gocam rank: 1000 multivalued: true domain_of: - Activity range: MoleculeAssociation inlined: true inlined_as_list: true has_primary_input: name: has_primary_input description: The primary input molecule that is directly consumed by the activity from_schema: https://w3id.org/gocam rank: 1000 domain_of: - Activity range: MoleculeAssociation inlined: true has_output: name: has_output description: The output molecules that are directly produced by the activity from_schema: https://w3id.org/gocam rank: 1000 multivalued: true domain_of: - Activity range: MoleculeAssociation inlined: true inlined_as_list: true has_primary_output: name: has_primary_output description: The primary output molecule that is directly produced by the activity from_schema: https://w3id.org/gocam rank: 1000 domain_of: - Activity range: MoleculeAssociation inlined: true causal_associations: name: causal_associations description: The causal associations that connect this activity to other activities from_schema: https://w3id.org/gocam rank: 1000 multivalued: true domain_of: - Activity range: CausalAssociation inlined: true inlined_as_list: true provenances: name: provenances description: Provenance information for the activity from_schema: https://w3id.org/gocam multivalued: true domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true Induced name: Activity description: An individual activity in a causal model, representing the individual molecular activity of a single gene product or complex in the context of a particular model from_schema: https://w3id.org/gocam aliases: - annoton attributes: id: name: id description: Identifier of the activity unit. Should be in gocam namespace. comments: - Typically does not need to be exposed to end-user, this exists to allow activity flows from_schema: https://w3id.org/gocam identifier: true alias: id owner: Activity domain_of: - Model - Activity - Object range: uriorcurie required: true enabled_by: name: enabled_by description: The gene product or complex that carries out the activity from_schema: https://w3id.org/gocam rank: 1000 alias: enabled_by owner: Activity domain_of: - Activity range: EnabledByAssociation inlined: true molecular_function: name: molecular_function description: The molecular function that is carried out by the gene product or complex todos: - currently BP, CC etc are at the level of the activity, not the MolecularFunctionAssociation from_schema: https://w3id.org/gocam rank: 1000 alias: molecular_function owner: Activity domain_of: - Activity range: MolecularFunctionAssociation inlined: true occurs_in: name: occurs_in description: The cellular location in which the activity occurs from_schema: https://w3id.org/gocam rank: 1000 alias: occurs_in owner: Activity domain_of: - Activity range: CellularAnatomicalEntityAssociation inlined: true part_of: name: part_of description: The larger biological process in which the activity is a part from_schema: https://w3id.org/gocam rank: 1000 alias: part_of owner: Activity domain_of: - Activity range: BiologicalProcessAssociation inlined: true has_input: name: has_input description: The input molecules that are directly consumed by the activity from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: has_input owner: Activity domain_of: - Activity range: MoleculeAssociation inlined: true inlined_as_list: true has_primary_input: name: has_primary_input description: The primary input molecule that is directly consumed by the activity from_schema: https://w3id.org/gocam rank: 1000 alias: has_primary_input owner: Activity domain_of: - Activity range: MoleculeAssociation inlined: true has_output: name: has_output description: The output molecules that are directly produced by the activity from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: has_output owner: Activity domain_of: - Activity range: MoleculeAssociation inlined: true inlined_as_list: true has_primary_output: name: has_primary_output description: The primary output molecule that is directly produced by the activity from_schema: https://w3id.org/gocam rank: 1000 alias: has_primary_output owner: Activity domain_of: - Activity range: MoleculeAssociation inlined: true causal_associations: name: causal_associations description: The causal associations that connect this activity to other activities from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: causal_associations owner: Activity domain_of: - Activity range: CausalAssociation inlined: true inlined_as_list: true provenances: name: provenances description: Provenance information for the activity from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: Activity domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Class: Activity"},{"location":"Activity/#class-activity","text":"An individual activity in a causal model, representing the individual molecular activity of a single gene product or complex in the context of a particular model URI: gocam:Activity classDiagram class Activity click Activity href \"../Activity\" Activity : causal_associations Activity --> \"*\" CausalAssociation : causal_associations click CausalAssociation href \"../CausalAssociation\" Activity : enabled_by Activity --> \"0..1\" EnabledByAssociation : enabled_by click EnabledByAssociation href \"../EnabledByAssociation\" Activity : has_input Activity --> \"*\" MoleculeAssociation : has_input click MoleculeAssociation href \"../MoleculeAssociation\" Activity : has_output Activity --> \"*\" MoleculeAssociation : has_output click MoleculeAssociation href \"../MoleculeAssociation\" Activity : has_primary_input Activity --> \"0..1\" MoleculeAssociation : has_primary_input click MoleculeAssociation href \"../MoleculeAssociation\" Activity : has_primary_output Activity --> \"0..1\" MoleculeAssociation : has_primary_output click MoleculeAssociation href \"../MoleculeAssociation\" Activity : id Activity : molecular_function Activity --> \"0..1\" MolecularFunctionAssociation : molecular_function click MolecularFunctionAssociation href \"../MolecularFunctionAssociation\" Activity : occurs_in Activity --> \"0..1\" CellularAnatomicalEntityAssociation : occurs_in click CellularAnatomicalEntityAssociation href \"../CellularAnatomicalEntityAssociation\" Activity : part_of Activity --> \"0..1\" BiologicalProcessAssociation : part_of click BiologicalProcessAssociation href \"../BiologicalProcessAssociation\" Activity : provenances Activity --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\"","title":"Class: Activity"},{"location":"Activity/#slots","text":"Name Cardinality and Range Description Inheritance id 1 Uriorcurie Identifier of the activity unit direct enabled_by 0..1 EnabledByAssociation The gene product or complex that carries out the activity direct molecular_function 0..1 MolecularFunctionAssociation The molecular function that is carried out by the gene product or complex direct occurs_in 0..1 CellularAnatomicalEntityAssociation The cellular location in which the activity occurs direct part_of 0..1 BiologicalProcessAssociation The larger biological process in which the activity is a part direct has_input * MoleculeAssociation The input molecules that are directly consumed by the activity direct has_primary_input 0..1 MoleculeAssociation The primary input molecule that is directly consumed by the activity direct has_output * MoleculeAssociation The output molecules that are directly produced by the activity direct has_primary_output 0..1 MoleculeAssociation The primary output molecule that is directly produced by the activity direct causal_associations * CausalAssociation The causal associations that connect this activity to other activities direct provenances * ProvenanceInfo Provenance information for the activity direct","title":"Slots"},{"location":"Activity/#usages","text":"used by used in type used Model activities range Activity CausalAssociation downstream_activity range Activity","title":"Usages"},{"location":"Activity/#aliases","text":"annoton","title":"Aliases"},{"location":"Activity/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Activity/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"Activity/#mappings","text":"Mapping Type Mapped Value self gocam:Activity native gocam:Activity","title":"Mappings"},{"location":"Activity/#linkml-source","text":"","title":"LinkML Source"},{"location":"Activity/#direct","text":"name: Activity description: An individual activity in a causal model, representing the individual molecular activity of a single gene product or complex in the context of a particular model from_schema: https://w3id.org/gocam aliases: - annoton attributes: id: name: id description: Identifier of the activity unit. Should be in gocam namespace. comments: - Typically does not need to be exposed to end-user, this exists to allow activity flows from_schema: https://w3id.org/gocam identifier: true domain_of: - Model - Activity - Object range: uriorcurie required: true enabled_by: name: enabled_by description: The gene product or complex that carries out the activity from_schema: https://w3id.org/gocam rank: 1000 domain_of: - Activity range: EnabledByAssociation inlined: true molecular_function: name: molecular_function description: The molecular function that is carried out by the gene product or complex todos: - currently BP, CC etc are at the level of the activity, not the MolecularFunctionAssociation from_schema: https://w3id.org/gocam rank: 1000 domain_of: - Activity range: MolecularFunctionAssociation inlined: true occurs_in: name: occurs_in description: The cellular location in which the activity occurs from_schema: https://w3id.org/gocam rank: 1000 domain_of: - Activity range: CellularAnatomicalEntityAssociation inlined: true part_of: name: part_of description: The larger biological process in which the activity is a part from_schema: https://w3id.org/gocam rank: 1000 domain_of: - Activity range: BiologicalProcessAssociation inlined: true has_input: name: has_input description: The input molecules that are directly consumed by the activity from_schema: https://w3id.org/gocam rank: 1000 multivalued: true domain_of: - Activity range: MoleculeAssociation inlined: true inlined_as_list: true has_primary_input: name: has_primary_input description: The primary input molecule that is directly consumed by the activity from_schema: https://w3id.org/gocam rank: 1000 domain_of: - Activity range: MoleculeAssociation inlined: true has_output: name: has_output description: The output molecules that are directly produced by the activity from_schema: https://w3id.org/gocam rank: 1000 multivalued: true domain_of: - Activity range: MoleculeAssociation inlined: true inlined_as_list: true has_primary_output: name: has_primary_output description: The primary output molecule that is directly produced by the activity from_schema: https://w3id.org/gocam rank: 1000 domain_of: - Activity range: MoleculeAssociation inlined: true causal_associations: name: causal_associations description: The causal associations that connect this activity to other activities from_schema: https://w3id.org/gocam rank: 1000 multivalued: true domain_of: - Activity range: CausalAssociation inlined: true inlined_as_list: true provenances: name: provenances description: Provenance information for the activity from_schema: https://w3id.org/gocam multivalued: true domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Direct"},{"location":"Activity/#induced","text":"name: Activity description: An individual activity in a causal model, representing the individual molecular activity of a single gene product or complex in the context of a particular model from_schema: https://w3id.org/gocam aliases: - annoton attributes: id: name: id description: Identifier of the activity unit. Should be in gocam namespace. comments: - Typically does not need to be exposed to end-user, this exists to allow activity flows from_schema: https://w3id.org/gocam identifier: true alias: id owner: Activity domain_of: - Model - Activity - Object range: uriorcurie required: true enabled_by: name: enabled_by description: The gene product or complex that carries out the activity from_schema: https://w3id.org/gocam rank: 1000 alias: enabled_by owner: Activity domain_of: - Activity range: EnabledByAssociation inlined: true molecular_function: name: molecular_function description: The molecular function that is carried out by the gene product or complex todos: - currently BP, CC etc are at the level of the activity, not the MolecularFunctionAssociation from_schema: https://w3id.org/gocam rank: 1000 alias: molecular_function owner: Activity domain_of: - Activity range: MolecularFunctionAssociation inlined: true occurs_in: name: occurs_in description: The cellular location in which the activity occurs from_schema: https://w3id.org/gocam rank: 1000 alias: occurs_in owner: Activity domain_of: - Activity range: CellularAnatomicalEntityAssociation inlined: true part_of: name: part_of description: The larger biological process in which the activity is a part from_schema: https://w3id.org/gocam rank: 1000 alias: part_of owner: Activity domain_of: - Activity range: BiologicalProcessAssociation inlined: true has_input: name: has_input description: The input molecules that are directly consumed by the activity from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: has_input owner: Activity domain_of: - Activity range: MoleculeAssociation inlined: true inlined_as_list: true has_primary_input: name: has_primary_input description: The primary input molecule that is directly consumed by the activity from_schema: https://w3id.org/gocam rank: 1000 alias: has_primary_input owner: Activity domain_of: - Activity range: MoleculeAssociation inlined: true has_output: name: has_output description: The output molecules that are directly produced by the activity from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: has_output owner: Activity domain_of: - Activity range: MoleculeAssociation inlined: true inlined_as_list: true has_primary_output: name: has_primary_output description: The primary output molecule that is directly produced by the activity from_schema: https://w3id.org/gocam rank: 1000 alias: has_primary_output owner: Activity domain_of: - Activity range: MoleculeAssociation inlined: true causal_associations: name: causal_associations description: The causal associations that connect this activity to other activities from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: causal_associations owner: Activity domain_of: - Activity range: CausalAssociation inlined: true inlined_as_list: true provenances: name: provenances description: Provenance information for the activity from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: Activity domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Induced"},{"location":"Association/","text":"Class: Association An abstract grouping for different kinds of evidence-associated provenance NOTE : this is an abstract class and should not be instantiated directly URI: gocam:Association classDiagram class Association click Association href \"../Association\" Association <|-- EnabledByAssociation click EnabledByAssociation href \"../EnabledByAssociation\" Association <|-- CausalAssociation click CausalAssociation href \"../CausalAssociation\" Association <|-- TermAssociation click TermAssociation href \"../TermAssociation\" Association : evidence Association --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" Association : provenances Association --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" Association : type Inheritance Association EnabledByAssociation CausalAssociation TermAssociation Slots Name Cardinality and Range Description Inheritance type 0..1 String direct evidence * EvidenceItem direct provenances * ProvenanceInfo direct Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:Association native gocam:Association LinkML Source Direct name: Association description: An abstract grouping for different kinds of evidence-associated provenance from_schema: https://w3id.org/gocam abstract: true attributes: type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true domain_of: - Association - Object evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true Induced name: Association description: An abstract grouping for different kinds of evidence-associated provenance from_schema: https://w3id.org/gocam abstract: true attributes: type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: Association domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: Association domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: Association domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Class: Association"},{"location":"Association/#class-association","text":"An abstract grouping for different kinds of evidence-associated provenance NOTE : this is an abstract class and should not be instantiated directly URI: gocam:Association classDiagram class Association click Association href \"../Association\" Association <|-- EnabledByAssociation click EnabledByAssociation href \"../EnabledByAssociation\" Association <|-- CausalAssociation click CausalAssociation href \"../CausalAssociation\" Association <|-- TermAssociation click TermAssociation href \"../TermAssociation\" Association : evidence Association --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" Association : provenances Association --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" Association : type","title":"Class: Association"},{"location":"Association/#inheritance","text":"Association EnabledByAssociation CausalAssociation TermAssociation","title":"Inheritance"},{"location":"Association/#slots","text":"Name Cardinality and Range Description Inheritance type 0..1 String direct evidence * EvidenceItem direct provenances * ProvenanceInfo direct","title":"Slots"},{"location":"Association/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Association/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"Association/#mappings","text":"Mapping Type Mapped Value self gocam:Association native gocam:Association","title":"Mappings"},{"location":"Association/#linkml-source","text":"","title":"LinkML Source"},{"location":"Association/#direct","text":"name: Association description: An abstract grouping for different kinds of evidence-associated provenance from_schema: https://w3id.org/gocam abstract: true attributes: type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true domain_of: - Association - Object evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Direct"},{"location":"Association/#induced","text":"name: Association description: An abstract grouping for different kinds of evidence-associated provenance from_schema: https://w3id.org/gocam abstract: true attributes: type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: Association domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: Association domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: Association domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Induced"},{"location":"BiologicalProcessAssociation/","text":"Class: BiologicalProcessAssociation An association between an activity and a biological process term URI: gocam:BiologicalProcessAssociation classDiagram class BiologicalProcessAssociation click BiologicalProcessAssociation href \"../BiologicalProcessAssociation\" TermAssociation <|-- BiologicalProcessAssociation click TermAssociation href \"../TermAssociation\" BiologicalProcessAssociation : evidence BiologicalProcessAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" BiologicalProcessAssociation : provenances BiologicalProcessAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" BiologicalProcessAssociation : term BiologicalProcessAssociation --> \"0..1\" BiologicalProcessTermObject : term click BiologicalProcessTermObject href \"../BiologicalProcessTermObject\" BiologicalProcessAssociation : type Inheritance Association TermAssociation BiologicalProcessAssociation Slots Name Cardinality and Range Description Inheritance term 0..1 BiologicalProcessTermObject The ontology term that describes the nature of the association TermAssociation type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association Usages used by used in type used Activity part_of range BiologicalProcessAssociation Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:BiologicalProcessAssociation native gocam:BiologicalProcessAssociation LinkML Source Direct name: BiologicalProcessAssociation description: An association between an activity and a biological process term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: BiologicalProcessTermObject happens_during: name: happens_during description: Optional extension describing where the BP takes place range: PhaseTermObject part_of: name: part_of description: Optional extension allowing hierarchical nesting of BPs range: BiologicalProcessTermObject Induced name: BiologicalProcessAssociation description: An association between an activity and a biological process term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: BiologicalProcessTermObject happens_during: name: happens_during description: Optional extension describing where the BP takes place range: PhaseTermObject part_of: name: part_of description: Optional extension allowing hierarchical nesting of BPs range: BiologicalProcessTermObject attributes: term: name: term description: The ontology term that describes the nature of the association from_schema: https://w3id.org/gocam alias: term owner: BiologicalProcessAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: BiologicalProcessTermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: BiologicalProcessAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: BiologicalProcessAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: BiologicalProcessAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Class: BiologicalProcessAssociation"},{"location":"BiologicalProcessAssociation/#class-biologicalprocessassociation","text":"An association between an activity and a biological process term URI: gocam:BiologicalProcessAssociation classDiagram class BiologicalProcessAssociation click BiologicalProcessAssociation href \"../BiologicalProcessAssociation\" TermAssociation <|-- BiologicalProcessAssociation click TermAssociation href \"../TermAssociation\" BiologicalProcessAssociation : evidence BiologicalProcessAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" BiologicalProcessAssociation : provenances BiologicalProcessAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" BiologicalProcessAssociation : term BiologicalProcessAssociation --> \"0..1\" BiologicalProcessTermObject : term click BiologicalProcessTermObject href \"../BiologicalProcessTermObject\" BiologicalProcessAssociation : type","title":"Class: BiologicalProcessAssociation"},{"location":"BiologicalProcessAssociation/#inheritance","text":"Association TermAssociation BiologicalProcessAssociation","title":"Inheritance"},{"location":"BiologicalProcessAssociation/#slots","text":"Name Cardinality and Range Description Inheritance term 0..1 BiologicalProcessTermObject The ontology term that describes the nature of the association TermAssociation type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association","title":"Slots"},{"location":"BiologicalProcessAssociation/#usages","text":"used by used in type used Activity part_of range BiologicalProcessAssociation","title":"Usages"},{"location":"BiologicalProcessAssociation/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"BiologicalProcessAssociation/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"BiologicalProcessAssociation/#mappings","text":"Mapping Type Mapped Value self gocam:BiologicalProcessAssociation native gocam:BiologicalProcessAssociation","title":"Mappings"},{"location":"BiologicalProcessAssociation/#linkml-source","text":"","title":"LinkML Source"},{"location":"BiologicalProcessAssociation/#direct","text":"name: BiologicalProcessAssociation description: An association between an activity and a biological process term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: BiologicalProcessTermObject happens_during: name: happens_during description: Optional extension describing where the BP takes place range: PhaseTermObject part_of: name: part_of description: Optional extension allowing hierarchical nesting of BPs range: BiologicalProcessTermObject","title":"Direct"},{"location":"BiologicalProcessAssociation/#induced","text":"name: BiologicalProcessAssociation description: An association between an activity and a biological process term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: BiologicalProcessTermObject happens_during: name: happens_during description: Optional extension describing where the BP takes place range: PhaseTermObject part_of: name: part_of description: Optional extension allowing hierarchical nesting of BPs range: BiologicalProcessTermObject attributes: term: name: term description: The ontology term that describes the nature of the association from_schema: https://w3id.org/gocam alias: term owner: BiologicalProcessAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: BiologicalProcessTermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: BiologicalProcessAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: BiologicalProcessAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: BiologicalProcessAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Induced"},{"location":"BiologicalProcessTermObject/","text":"Class: BiologicalProcessTermObject A term object that represents a biological process term from GO URI: gocam:BiologicalProcessTermObject classDiagram class BiologicalProcessTermObject click BiologicalProcessTermObject href \"../BiologicalProcessTermObject\" TermObject <|-- BiologicalProcessTermObject click TermObject href \"../TermObject\" BiologicalProcessTermObject : id BiologicalProcessTermObject : label BiologicalProcessTermObject : obsolete BiologicalProcessTermObject : type Inheritance Object TermObject BiologicalProcessTermObject Slots Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object Usages used by used in type used BiologicalProcessAssociation term range BiologicalProcessTermObject Identifier and Mapping Information Valid ID Prefixes Instances of this class should have identifiers with one of the following prefixes: GO Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:BiologicalProcessTermObject native gocam:BiologicalProcessTermObject LinkML Source Direct name: BiologicalProcessTermObject id_prefixes: - GO description: A term object that represents a biological process term from GO from_schema: https://w3id.org/gocam is_a: TermObject Induced name: BiologicalProcessTermObject id_prefixes: - GO description: A term object that represents a biological process term from GO from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: BiologicalProcessTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: BiologicalProcessTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: BiologicalProcessTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: BiologicalProcessTermObject domain_of: - Object range: boolean","title":"Class: BiologicalProcessTermObject"},{"location":"BiologicalProcessTermObject/#class-biologicalprocesstermobject","text":"A term object that represents a biological process term from GO URI: gocam:BiologicalProcessTermObject classDiagram class BiologicalProcessTermObject click BiologicalProcessTermObject href \"../BiologicalProcessTermObject\" TermObject <|-- BiologicalProcessTermObject click TermObject href \"../TermObject\" BiologicalProcessTermObject : id BiologicalProcessTermObject : label BiologicalProcessTermObject : obsolete BiologicalProcessTermObject : type","title":"Class: BiologicalProcessTermObject"},{"location":"BiologicalProcessTermObject/#inheritance","text":"Object TermObject BiologicalProcessTermObject","title":"Inheritance"},{"location":"BiologicalProcessTermObject/#slots","text":"Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object","title":"Slots"},{"location":"BiologicalProcessTermObject/#usages","text":"used by used in type used BiologicalProcessAssociation term range BiologicalProcessTermObject","title":"Usages"},{"location":"BiologicalProcessTermObject/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"BiologicalProcessTermObject/#valid-id-prefixes","text":"Instances of this class should have identifiers with one of the following prefixes: GO","title":"Valid ID Prefixes"},{"location":"BiologicalProcessTermObject/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"BiologicalProcessTermObject/#mappings","text":"Mapping Type Mapped Value self gocam:BiologicalProcessTermObject native gocam:BiologicalProcessTermObject","title":"Mappings"},{"location":"BiologicalProcessTermObject/#linkml-source","text":"","title":"LinkML Source"},{"location":"BiologicalProcessTermObject/#direct","text":"name: BiologicalProcessTermObject id_prefixes: - GO description: A term object that represents a biological process term from GO from_schema: https://w3id.org/gocam is_a: TermObject","title":"Direct"},{"location":"BiologicalProcessTermObject/#induced","text":"name: BiologicalProcessTermObject id_prefixes: - GO description: A term object that represents a biological process term from GO from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: BiologicalProcessTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: BiologicalProcessTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: BiologicalProcessTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: BiologicalProcessTermObject domain_of: - Object range: boolean","title":"Induced"},{"location":"Boolean/","text":"Type: Boolean A binary (true or false) value URI: xsd:boolean base : Bool uri : xsd:boolean repr : bool Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam","title":"Type: Boolean"},{"location":"Boolean/#type-boolean","text":"A binary (true or false) value URI: xsd:boolean base : Bool uri : xsd:boolean repr : bool","title":"Type: Boolean"},{"location":"Boolean/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Boolean/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"CausalAssociation/","text":"Class: CausalAssociation A causal association between two activities URI: gocam:CausalAssociation classDiagram class CausalAssociation click CausalAssociation href \"../CausalAssociation\" Association <|-- CausalAssociation click Association href \"../Association\" CausalAssociation : downstream_activity CausalAssociation --> \"0..1\" Activity : downstream_activity click Activity href \"../Activity\" CausalAssociation : evidence CausalAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" CausalAssociation : predicate CausalAssociation --> \"0..1\" PredicateTermObject : predicate click PredicateTermObject href \"../PredicateTermObject\" CausalAssociation : provenances CausalAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" CausalAssociation : type Inheritance Association CausalAssociation Slots Name Cardinality and Range Description Inheritance predicate 0..1 PredicateTermObject The RO relation that represents the type of relationship direct downstream_activity 0..1 Activity The activity unit that is downstream of this one direct type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association Usages used by used in type used Activity causal_associations range CausalAssociation Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:CausalAssociation native gocam:CausalAssociation LinkML Source Direct name: CausalAssociation description: A causal association between two activities from_schema: https://w3id.org/gocam is_a: Association attributes: predicate: name: predicate description: The RO relation that represents the type of relationship from_schema: https://w3id.org/gocam rank: 1000 domain_of: - CausalAssociation range: PredicateTermObject downstream_activity: name: downstream_activity description: The activity unit that is downstream of this one from_schema: https://w3id.org/gocam aliases: - object rank: 1000 domain_of: - CausalAssociation range: Activity Induced name: CausalAssociation description: A causal association between two activities from_schema: https://w3id.org/gocam is_a: Association attributes: predicate: name: predicate description: The RO relation that represents the type of relationship from_schema: https://w3id.org/gocam rank: 1000 alias: predicate owner: CausalAssociation domain_of: - CausalAssociation range: PredicateTermObject downstream_activity: name: downstream_activity description: The activity unit that is downstream of this one from_schema: https://w3id.org/gocam aliases: - object rank: 1000 alias: downstream_activity owner: CausalAssociation domain_of: - CausalAssociation range: Activity type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: CausalAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: CausalAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: CausalAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Class: CausalAssociation"},{"location":"CausalAssociation/#class-causalassociation","text":"A causal association between two activities URI: gocam:CausalAssociation classDiagram class CausalAssociation click CausalAssociation href \"../CausalAssociation\" Association <|-- CausalAssociation click Association href \"../Association\" CausalAssociation : downstream_activity CausalAssociation --> \"0..1\" Activity : downstream_activity click Activity href \"../Activity\" CausalAssociation : evidence CausalAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" CausalAssociation : predicate CausalAssociation --> \"0..1\" PredicateTermObject : predicate click PredicateTermObject href \"../PredicateTermObject\" CausalAssociation : provenances CausalAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" CausalAssociation : type","title":"Class: CausalAssociation"},{"location":"CausalAssociation/#inheritance","text":"Association CausalAssociation","title":"Inheritance"},{"location":"CausalAssociation/#slots","text":"Name Cardinality and Range Description Inheritance predicate 0..1 PredicateTermObject The RO relation that represents the type of relationship direct downstream_activity 0..1 Activity The activity unit that is downstream of this one direct type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association","title":"Slots"},{"location":"CausalAssociation/#usages","text":"used by used in type used Activity causal_associations range CausalAssociation","title":"Usages"},{"location":"CausalAssociation/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"CausalAssociation/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"CausalAssociation/#mappings","text":"Mapping Type Mapped Value self gocam:CausalAssociation native gocam:CausalAssociation","title":"Mappings"},{"location":"CausalAssociation/#linkml-source","text":"","title":"LinkML Source"},{"location":"CausalAssociation/#direct","text":"name: CausalAssociation description: A causal association between two activities from_schema: https://w3id.org/gocam is_a: Association attributes: predicate: name: predicate description: The RO relation that represents the type of relationship from_schema: https://w3id.org/gocam rank: 1000 domain_of: - CausalAssociation range: PredicateTermObject downstream_activity: name: downstream_activity description: The activity unit that is downstream of this one from_schema: https://w3id.org/gocam aliases: - object rank: 1000 domain_of: - CausalAssociation range: Activity","title":"Direct"},{"location":"CausalAssociation/#induced","text":"name: CausalAssociation description: A causal association between two activities from_schema: https://w3id.org/gocam is_a: Association attributes: predicate: name: predicate description: The RO relation that represents the type of relationship from_schema: https://w3id.org/gocam rank: 1000 alias: predicate owner: CausalAssociation domain_of: - CausalAssociation range: PredicateTermObject downstream_activity: name: downstream_activity description: The activity unit that is downstream of this one from_schema: https://w3id.org/gocam aliases: - object rank: 1000 alias: downstream_activity owner: CausalAssociation domain_of: - CausalAssociation range: Activity type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: CausalAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: CausalAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: CausalAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Induced"},{"location":"CausalPredicateEnum/","text":"Enum: CausalPredicateEnum URI: CausalPredicateEnum Permissible Values Value Meaning Description causally upstream of, positive effect RO:0002304 causally upstream of, negative effect RO:0002305 causally upstream of RO:0002411 immediately causally upstream of RO:0002412 causally upstream of or within RO:0002418 causally upstream of or within, negative effect RO:0004046 causally upstream of or within, positive effect RO:0004047 regulates RO:0002211 negatively regulates RO:0002212 positively regulates RO:0002213 Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam LinkML Source name: CausalPredicateEnum from_schema: https://w3id.org/gocam rank: 1000 permissible_values: causally upstream of, positive effect: text: causally upstream of, positive effect meaning: RO:0002304 causally upstream of, negative effect: text: causally upstream of, negative effect meaning: RO:0002305 causally upstream of: text: causally upstream of meaning: RO:0002411 immediately causally upstream of: text: immediately causally upstream of meaning: RO:0002412 causally upstream of or within: text: causally upstream of or within meaning: RO:0002418 causally upstream of or within, negative effect: text: causally upstream of or within, negative effect meaning: RO:0004046 causally upstream of or within, positive effect: text: causally upstream of or within, positive effect meaning: RO:0004047 regulates: text: regulates meaning: RO:0002211 negatively regulates: text: negatively regulates meaning: RO:0002212 positively regulates: text: positively regulates meaning: RO:0002213","title":"Enum: CausalPredicateEnum"},{"location":"CausalPredicateEnum/#enum-causalpredicateenum","text":"URI: CausalPredicateEnum","title":"Enum: CausalPredicateEnum"},{"location":"CausalPredicateEnum/#permissible-values","text":"Value Meaning Description causally upstream of, positive effect RO:0002304 causally upstream of, negative effect RO:0002305 causally upstream of RO:0002411 immediately causally upstream of RO:0002412 causally upstream of or within RO:0002418 causally upstream of or within, negative effect RO:0004046 causally upstream of or within, positive effect RO:0004047 regulates RO:0002211 negatively regulates RO:0002212 positively regulates RO:0002213","title":"Permissible Values"},{"location":"CausalPredicateEnum/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"CausalPredicateEnum/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"CausalPredicateEnum/#linkml-source","text":"name: CausalPredicateEnum from_schema: https://w3id.org/gocam rank: 1000 permissible_values: causally upstream of, positive effect: text: causally upstream of, positive effect meaning: RO:0002304 causally upstream of, negative effect: text: causally upstream of, negative effect meaning: RO:0002305 causally upstream of: text: causally upstream of meaning: RO:0002411 immediately causally upstream of: text: immediately causally upstream of meaning: RO:0002412 causally upstream of or within: text: causally upstream of or within meaning: RO:0002418 causally upstream of or within, negative effect: text: causally upstream of or within, negative effect meaning: RO:0004046 causally upstream of or within, positive effect: text: causally upstream of or within, positive effect meaning: RO:0004047 regulates: text: regulates meaning: RO:0002211 negatively regulates: text: negatively regulates meaning: RO:0002212 positively regulates: text: positively regulates meaning: RO:0002213","title":"LinkML Source"},{"location":"CellTypeAssociation/","text":"Class: CellTypeAssociation An association between an activity and a cell type term URI: gocam:CellTypeAssociation classDiagram class CellTypeAssociation click CellTypeAssociation href \"../CellTypeAssociation\" TermAssociation <|-- CellTypeAssociation click TermAssociation href \"../TermAssociation\" CellTypeAssociation : evidence CellTypeAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" CellTypeAssociation : provenances CellTypeAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" CellTypeAssociation : term CellTypeAssociation --> \"0..1\" CellTypeTermObject : term click CellTypeTermObject href \"../CellTypeTermObject\" CellTypeAssociation : type Inheritance Association TermAssociation CellTypeAssociation Slots Name Cardinality and Range Description Inheritance term 0..1 CellTypeTermObject The ontology term that describes the nature of the association TermAssociation type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:CellTypeAssociation native gocam:CellTypeAssociation LinkML Source Direct name: CellTypeAssociation description: An association between an activity and a cell type term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: CellTypeTermObject part_of: name: part_of range: GrossAnatomyAssociation Induced name: CellTypeAssociation description: An association between an activity and a cell type term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: CellTypeTermObject part_of: name: part_of range: GrossAnatomyAssociation attributes: term: name: term description: The ontology term that describes the nature of the association from_schema: https://w3id.org/gocam alias: term owner: CellTypeAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: CellTypeTermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: CellTypeAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: CellTypeAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: CellTypeAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Class: CellTypeAssociation"},{"location":"CellTypeAssociation/#class-celltypeassociation","text":"An association between an activity and a cell type term URI: gocam:CellTypeAssociation classDiagram class CellTypeAssociation click CellTypeAssociation href \"../CellTypeAssociation\" TermAssociation <|-- CellTypeAssociation click TermAssociation href \"../TermAssociation\" CellTypeAssociation : evidence CellTypeAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" CellTypeAssociation : provenances CellTypeAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" CellTypeAssociation : term CellTypeAssociation --> \"0..1\" CellTypeTermObject : term click CellTypeTermObject href \"../CellTypeTermObject\" CellTypeAssociation : type","title":"Class: CellTypeAssociation"},{"location":"CellTypeAssociation/#inheritance","text":"Association TermAssociation CellTypeAssociation","title":"Inheritance"},{"location":"CellTypeAssociation/#slots","text":"Name Cardinality and Range Description Inheritance term 0..1 CellTypeTermObject The ontology term that describes the nature of the association TermAssociation type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association","title":"Slots"},{"location":"CellTypeAssociation/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"CellTypeAssociation/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"CellTypeAssociation/#mappings","text":"Mapping Type Mapped Value self gocam:CellTypeAssociation native gocam:CellTypeAssociation","title":"Mappings"},{"location":"CellTypeAssociation/#linkml-source","text":"","title":"LinkML Source"},{"location":"CellTypeAssociation/#direct","text":"name: CellTypeAssociation description: An association between an activity and a cell type term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: CellTypeTermObject part_of: name: part_of range: GrossAnatomyAssociation","title":"Direct"},{"location":"CellTypeAssociation/#induced","text":"name: CellTypeAssociation description: An association between an activity and a cell type term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: CellTypeTermObject part_of: name: part_of range: GrossAnatomyAssociation attributes: term: name: term description: The ontology term that describes the nature of the association from_schema: https://w3id.org/gocam alias: term owner: CellTypeAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: CellTypeTermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: CellTypeAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: CellTypeAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: CellTypeAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Induced"},{"location":"CellTypeTermObject/","text":"Class: CellTypeTermObject A term object that represents a cell type term from CL URI: gocam:CellTypeTermObject classDiagram class CellTypeTermObject click CellTypeTermObject href \"../CellTypeTermObject\" TermObject <|-- CellTypeTermObject click TermObject href \"../TermObject\" CellTypeTermObject : id CellTypeTermObject : label CellTypeTermObject : obsolete CellTypeTermObject : type Inheritance Object TermObject CellTypeTermObject Slots Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object Usages used by used in type used CellTypeAssociation term range CellTypeTermObject Identifier and Mapping Information Valid ID Prefixes Instances of this class should have identifiers with one of the following prefixes: CL PO FAO DDANAT Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:CellTypeTermObject native gocam:CellTypeTermObject LinkML Source Direct name: CellTypeTermObject id_prefixes: - CL - PO - FAO - DDANAT description: A term object that represents a cell type term from CL from_schema: https://w3id.org/gocam is_a: TermObject Induced name: CellTypeTermObject id_prefixes: - CL - PO - FAO - DDANAT description: A term object that represents a cell type term from CL from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: CellTypeTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: CellTypeTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: CellTypeTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: CellTypeTermObject domain_of: - Object range: boolean","title":"Class: CellTypeTermObject"},{"location":"CellTypeTermObject/#class-celltypetermobject","text":"A term object that represents a cell type term from CL URI: gocam:CellTypeTermObject classDiagram class CellTypeTermObject click CellTypeTermObject href \"../CellTypeTermObject\" TermObject <|-- CellTypeTermObject click TermObject href \"../TermObject\" CellTypeTermObject : id CellTypeTermObject : label CellTypeTermObject : obsolete CellTypeTermObject : type","title":"Class: CellTypeTermObject"},{"location":"CellTypeTermObject/#inheritance","text":"Object TermObject CellTypeTermObject","title":"Inheritance"},{"location":"CellTypeTermObject/#slots","text":"Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object","title":"Slots"},{"location":"CellTypeTermObject/#usages","text":"used by used in type used CellTypeAssociation term range CellTypeTermObject","title":"Usages"},{"location":"CellTypeTermObject/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"CellTypeTermObject/#valid-id-prefixes","text":"Instances of this class should have identifiers with one of the following prefixes: CL PO FAO DDANAT","title":"Valid ID Prefixes"},{"location":"CellTypeTermObject/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"CellTypeTermObject/#mappings","text":"Mapping Type Mapped Value self gocam:CellTypeTermObject native gocam:CellTypeTermObject","title":"Mappings"},{"location":"CellTypeTermObject/#linkml-source","text":"","title":"LinkML Source"},{"location":"CellTypeTermObject/#direct","text":"name: CellTypeTermObject id_prefixes: - CL - PO - FAO - DDANAT description: A term object that represents a cell type term from CL from_schema: https://w3id.org/gocam is_a: TermObject","title":"Direct"},{"location":"CellTypeTermObject/#induced","text":"name: CellTypeTermObject id_prefixes: - CL - PO - FAO - DDANAT description: A term object that represents a cell type term from CL from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: CellTypeTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: CellTypeTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: CellTypeTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: CellTypeTermObject domain_of: - Object range: boolean","title":"Induced"},{"location":"CellularAnatomicalEntityAssociation/","text":"Class: CellularAnatomicalEntityAssociation An association between an activity and a cellular anatomical entity term URI: gocam:CellularAnatomicalEntityAssociation classDiagram class CellularAnatomicalEntityAssociation click CellularAnatomicalEntityAssociation href \"../CellularAnatomicalEntityAssociation\" TermAssociation <|-- CellularAnatomicalEntityAssociation click TermAssociation href \"../TermAssociation\" CellularAnatomicalEntityAssociation : evidence CellularAnatomicalEntityAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" CellularAnatomicalEntityAssociation : provenances CellularAnatomicalEntityAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" CellularAnatomicalEntityAssociation : term CellularAnatomicalEntityAssociation --> \"0..1\" CellularAnatomicalEntityTermObject : term click CellularAnatomicalEntityTermObject href \"../CellularAnatomicalEntityTermObject\" CellularAnatomicalEntityAssociation : type Inheritance Association TermAssociation CellularAnatomicalEntityAssociation Slots Name Cardinality and Range Description Inheritance term 0..1 CellularAnatomicalEntityTermObject The ontology term that describes the nature of the association TermAssociation type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association Usages used by used in type used Activity occurs_in range CellularAnatomicalEntityAssociation Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:CellularAnatomicalEntityAssociation native gocam:CellularAnatomicalEntityAssociation LinkML Source Direct name: CellularAnatomicalEntityAssociation description: An association between an activity and a cellular anatomical entity term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: CellularAnatomicalEntityTermObject part_of: name: part_of range: CellTypeAssociation Induced name: CellularAnatomicalEntityAssociation description: An association between an activity and a cellular anatomical entity term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: CellularAnatomicalEntityTermObject part_of: name: part_of range: CellTypeAssociation attributes: term: name: term description: The ontology term that describes the nature of the association from_schema: https://w3id.org/gocam alias: term owner: CellularAnatomicalEntityAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: CellularAnatomicalEntityTermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: CellularAnatomicalEntityAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: CellularAnatomicalEntityAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: CellularAnatomicalEntityAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Class: CellularAnatomicalEntityAssociation"},{"location":"CellularAnatomicalEntityAssociation/#class-cellularanatomicalentityassociation","text":"An association between an activity and a cellular anatomical entity term URI: gocam:CellularAnatomicalEntityAssociation classDiagram class CellularAnatomicalEntityAssociation click CellularAnatomicalEntityAssociation href \"../CellularAnatomicalEntityAssociation\" TermAssociation <|-- CellularAnatomicalEntityAssociation click TermAssociation href \"../TermAssociation\" CellularAnatomicalEntityAssociation : evidence CellularAnatomicalEntityAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" CellularAnatomicalEntityAssociation : provenances CellularAnatomicalEntityAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" CellularAnatomicalEntityAssociation : term CellularAnatomicalEntityAssociation --> \"0..1\" CellularAnatomicalEntityTermObject : term click CellularAnatomicalEntityTermObject href \"../CellularAnatomicalEntityTermObject\" CellularAnatomicalEntityAssociation : type","title":"Class: CellularAnatomicalEntityAssociation"},{"location":"CellularAnatomicalEntityAssociation/#inheritance","text":"Association TermAssociation CellularAnatomicalEntityAssociation","title":"Inheritance"},{"location":"CellularAnatomicalEntityAssociation/#slots","text":"Name Cardinality and Range Description Inheritance term 0..1 CellularAnatomicalEntityTermObject The ontology term that describes the nature of the association TermAssociation type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association","title":"Slots"},{"location":"CellularAnatomicalEntityAssociation/#usages","text":"used by used in type used Activity occurs_in range CellularAnatomicalEntityAssociation","title":"Usages"},{"location":"CellularAnatomicalEntityAssociation/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"CellularAnatomicalEntityAssociation/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"CellularAnatomicalEntityAssociation/#mappings","text":"Mapping Type Mapped Value self gocam:CellularAnatomicalEntityAssociation native gocam:CellularAnatomicalEntityAssociation","title":"Mappings"},{"location":"CellularAnatomicalEntityAssociation/#linkml-source","text":"","title":"LinkML Source"},{"location":"CellularAnatomicalEntityAssociation/#direct","text":"name: CellularAnatomicalEntityAssociation description: An association between an activity and a cellular anatomical entity term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: CellularAnatomicalEntityTermObject part_of: name: part_of range: CellTypeAssociation","title":"Direct"},{"location":"CellularAnatomicalEntityAssociation/#induced","text":"name: CellularAnatomicalEntityAssociation description: An association between an activity and a cellular anatomical entity term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: CellularAnatomicalEntityTermObject part_of: name: part_of range: CellTypeAssociation attributes: term: name: term description: The ontology term that describes the nature of the association from_schema: https://w3id.org/gocam alias: term owner: CellularAnatomicalEntityAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: CellularAnatomicalEntityTermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: CellularAnatomicalEntityAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: CellularAnatomicalEntityAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: CellularAnatomicalEntityAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Induced"},{"location":"CellularAnatomicalEntityTermObject/","text":"Class: CellularAnatomicalEntityTermObject A term object that represents a cellular anatomical entity term from GO URI: gocam:CellularAnatomicalEntityTermObject classDiagram class CellularAnatomicalEntityTermObject click CellularAnatomicalEntityTermObject href \"../CellularAnatomicalEntityTermObject\" TermObject <|-- CellularAnatomicalEntityTermObject click TermObject href \"../TermObject\" CellularAnatomicalEntityTermObject : id CellularAnatomicalEntityTermObject : label CellularAnatomicalEntityTermObject : obsolete CellularAnatomicalEntityTermObject : type Inheritance Object TermObject CellularAnatomicalEntityTermObject Slots Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object Usages used by used in type used CellularAnatomicalEntityAssociation term range CellularAnatomicalEntityTermObject Identifier and Mapping Information Valid ID Prefixes Instances of this class should have identifiers with one of the following prefixes: GO Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:CellularAnatomicalEntityTermObject native gocam:CellularAnatomicalEntityTermObject LinkML Source Direct name: CellularAnatomicalEntityTermObject id_prefixes: - GO description: A term object that represents a cellular anatomical entity term from GO from_schema: https://w3id.org/gocam is_a: TermObject Induced name: CellularAnatomicalEntityTermObject id_prefixes: - GO description: A term object that represents a cellular anatomical entity term from GO from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: CellularAnatomicalEntityTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: CellularAnatomicalEntityTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: CellularAnatomicalEntityTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: CellularAnatomicalEntityTermObject domain_of: - Object range: boolean","title":"Class: CellularAnatomicalEntityTermObject"},{"location":"CellularAnatomicalEntityTermObject/#class-cellularanatomicalentitytermobject","text":"A term object that represents a cellular anatomical entity term from GO URI: gocam:CellularAnatomicalEntityTermObject classDiagram class CellularAnatomicalEntityTermObject click CellularAnatomicalEntityTermObject href \"../CellularAnatomicalEntityTermObject\" TermObject <|-- CellularAnatomicalEntityTermObject click TermObject href \"../TermObject\" CellularAnatomicalEntityTermObject : id CellularAnatomicalEntityTermObject : label CellularAnatomicalEntityTermObject : obsolete CellularAnatomicalEntityTermObject : type","title":"Class: CellularAnatomicalEntityTermObject"},{"location":"CellularAnatomicalEntityTermObject/#inheritance","text":"Object TermObject CellularAnatomicalEntityTermObject","title":"Inheritance"},{"location":"CellularAnatomicalEntityTermObject/#slots","text":"Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object","title":"Slots"},{"location":"CellularAnatomicalEntityTermObject/#usages","text":"used by used in type used CellularAnatomicalEntityAssociation term range CellularAnatomicalEntityTermObject","title":"Usages"},{"location":"CellularAnatomicalEntityTermObject/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"CellularAnatomicalEntityTermObject/#valid-id-prefixes","text":"Instances of this class should have identifiers with one of the following prefixes: GO","title":"Valid ID Prefixes"},{"location":"CellularAnatomicalEntityTermObject/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"CellularAnatomicalEntityTermObject/#mappings","text":"Mapping Type Mapped Value self gocam:CellularAnatomicalEntityTermObject native gocam:CellularAnatomicalEntityTermObject","title":"Mappings"},{"location":"CellularAnatomicalEntityTermObject/#linkml-source","text":"","title":"LinkML Source"},{"location":"CellularAnatomicalEntityTermObject/#direct","text":"name: CellularAnatomicalEntityTermObject id_prefixes: - GO description: A term object that represents a cellular anatomical entity term from GO from_schema: https://w3id.org/gocam is_a: TermObject","title":"Direct"},{"location":"CellularAnatomicalEntityTermObject/#induced","text":"name: CellularAnatomicalEntityTermObject id_prefixes: - GO description: A term object that represents a cellular anatomical entity term from GO from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: CellularAnatomicalEntityTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: CellularAnatomicalEntityTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: CellularAnatomicalEntityTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: CellularAnatomicalEntityTermObject domain_of: - Object range: boolean","title":"Induced"},{"location":"Curie/","text":"Type: Curie a compact URI URI: xsd:string base : Curie uri : xsd:string repr : str Comments in RDF serializations this MUST be expanded to a URI in non-RDF serializations MAY be serialized as the compact representation Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam","title":"Type: Curie"},{"location":"Curie/#type-curie","text":"a compact URI URI: xsd:string base : Curie uri : xsd:string repr : str","title":"Type: Curie"},{"location":"Curie/#comments","text":"in RDF serializations this MUST be expanded to a URI in non-RDF serializations MAY be serialized as the compact representation","title":"Comments"},{"location":"Curie/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Curie/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"Date/","text":"Type: Date a date (year, month and day) in an idealized calendar URI: xsd:date base : XSDDate uri : xsd:date repr : str Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam","title":"Type: Date"},{"location":"Date/#type-date","text":"a date (year, month and day) in an idealized calendar URI: xsd:date base : XSDDate uri : xsd:date repr : str","title":"Type: Date"},{"location":"Date/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Date/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"DateOrDatetime/","text":"Type: DateOrDatetime Either a date or a datetime URI: linkml:DateOrDatetime base : str uri : linkml:DateOrDatetime repr : str Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam","title":"Type: DateOrDatetime"},{"location":"DateOrDatetime/#type-dateordatetime","text":"Either a date or a datetime URI: linkml:DateOrDatetime base : str uri : linkml:DateOrDatetime repr : str","title":"Type: DateOrDatetime"},{"location":"DateOrDatetime/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"DateOrDatetime/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"Datetime/","text":"Type: Datetime The combination of a date and time URI: xsd:dateTime base : XSDDateTime uri : xsd:dateTime repr : str Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam","title":"Type: Datetime"},{"location":"Datetime/#type-datetime","text":"The combination of a date and time URI: xsd:dateTime base : XSDDateTime uri : xsd:dateTime repr : str","title":"Type: Datetime"},{"location":"Datetime/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Datetime/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"Decimal/","text":"Type: Decimal A real number with arbitrary precision that conforms to the xsd:decimal specification URI: xsd:decimal base : Decimal uri : xsd:decimal Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam","title":"Type: Decimal"},{"location":"Decimal/#type-decimal","text":"A real number with arbitrary precision that conforms to the xsd:decimal specification URI: xsd:decimal base : Decimal uri : xsd:decimal","title":"Type: Decimal"},{"location":"Decimal/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Decimal/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"Double/","text":"Type: Double A real number that conforms to the xsd:double specification URI: xsd:double base : float uri : xsd:double Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam","title":"Type: Double"},{"location":"Double/#type-double","text":"A real number that conforms to the xsd:double specification URI: xsd:double base : float uri : xsd:double","title":"Type: Double"},{"location":"Double/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Double/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"EnabledByAssociation/","text":"Class: EnabledByAssociation An association between an activity and the gene product or complex that carries it out NOTE : this is an abstract class and should not be instantiated directly URI: gocam:EnabledByAssociation classDiagram class EnabledByAssociation click EnabledByAssociation href \"../EnabledByAssociation\" Association <|-- EnabledByAssociation click Association href \"../Association\" EnabledByAssociation <|-- EnabledByGeneProductAssociation click EnabledByGeneProductAssociation href \"../EnabledByGeneProductAssociation\" EnabledByAssociation <|-- EnabledByProteinComplexAssociation click EnabledByProteinComplexAssociation href \"../EnabledByProteinComplexAssociation\" EnabledByAssociation : evidence EnabledByAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" EnabledByAssociation : provenances EnabledByAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" EnabledByAssociation : term EnabledByAssociation --> \"0..1\" InformationBiomacromoleculeTermObject : term click InformationBiomacromoleculeTermObject href \"../InformationBiomacromoleculeTermObject\" EnabledByAssociation : type Inheritance Association EnabledByAssociation EnabledByGeneProductAssociation EnabledByProteinComplexAssociation Slots Name Cardinality and Range Description Inheritance term 0..1 InformationBiomacromoleculeTermObject The gene product or complex that carries out the activity direct type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association Usages used by used in type used Activity enabled_by range EnabledByAssociation Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:EnabledByAssociation native gocam:EnabledByAssociation LinkML Source Direct name: EnabledByAssociation description: An association between an activity and the gene product or complex that carries it out from_schema: https://w3id.org/gocam is_a: Association abstract: true attributes: term: name: term description: The gene product or complex that carries out the activity from_schema: https://w3id.org/gocam domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: InformationBiomacromoleculeTermObject Induced name: EnabledByAssociation description: An association between an activity and the gene product or complex that carries it out from_schema: https://w3id.org/gocam is_a: Association abstract: true attributes: term: name: term description: The gene product or complex that carries out the activity from_schema: https://w3id.org/gocam alias: term owner: EnabledByAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: InformationBiomacromoleculeTermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: EnabledByAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: EnabledByAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: EnabledByAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Class: EnabledByAssociation"},{"location":"EnabledByAssociation/#class-enabledbyassociation","text":"An association between an activity and the gene product or complex that carries it out NOTE : this is an abstract class and should not be instantiated directly URI: gocam:EnabledByAssociation classDiagram class EnabledByAssociation click EnabledByAssociation href \"../EnabledByAssociation\" Association <|-- EnabledByAssociation click Association href \"../Association\" EnabledByAssociation <|-- EnabledByGeneProductAssociation click EnabledByGeneProductAssociation href \"../EnabledByGeneProductAssociation\" EnabledByAssociation <|-- EnabledByProteinComplexAssociation click EnabledByProteinComplexAssociation href \"../EnabledByProteinComplexAssociation\" EnabledByAssociation : evidence EnabledByAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" EnabledByAssociation : provenances EnabledByAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" EnabledByAssociation : term EnabledByAssociation --> \"0..1\" InformationBiomacromoleculeTermObject : term click InformationBiomacromoleculeTermObject href \"../InformationBiomacromoleculeTermObject\" EnabledByAssociation : type","title":"Class: EnabledByAssociation"},{"location":"EnabledByAssociation/#inheritance","text":"Association EnabledByAssociation EnabledByGeneProductAssociation EnabledByProteinComplexAssociation","title":"Inheritance"},{"location":"EnabledByAssociation/#slots","text":"Name Cardinality and Range Description Inheritance term 0..1 InformationBiomacromoleculeTermObject The gene product or complex that carries out the activity direct type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association","title":"Slots"},{"location":"EnabledByAssociation/#usages","text":"used by used in type used Activity enabled_by range EnabledByAssociation","title":"Usages"},{"location":"EnabledByAssociation/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"EnabledByAssociation/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"EnabledByAssociation/#mappings","text":"Mapping Type Mapped Value self gocam:EnabledByAssociation native gocam:EnabledByAssociation","title":"Mappings"},{"location":"EnabledByAssociation/#linkml-source","text":"","title":"LinkML Source"},{"location":"EnabledByAssociation/#direct","text":"name: EnabledByAssociation description: An association between an activity and the gene product or complex that carries it out from_schema: https://w3id.org/gocam is_a: Association abstract: true attributes: term: name: term description: The gene product or complex that carries out the activity from_schema: https://w3id.org/gocam domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: InformationBiomacromoleculeTermObject","title":"Direct"},{"location":"EnabledByAssociation/#induced","text":"name: EnabledByAssociation description: An association between an activity and the gene product or complex that carries it out from_schema: https://w3id.org/gocam is_a: Association abstract: true attributes: term: name: term description: The gene product or complex that carries out the activity from_schema: https://w3id.org/gocam alias: term owner: EnabledByAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: InformationBiomacromoleculeTermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: EnabledByAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: EnabledByAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: EnabledByAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Induced"},{"location":"EnabledByGeneProductAssociation/","text":"Class: EnabledByGeneProductAssociation An association between an activity and a gene product URI: gocam:EnabledByGeneProductAssociation classDiagram class EnabledByGeneProductAssociation click EnabledByGeneProductAssociation href \"../EnabledByGeneProductAssociation\" EnabledByAssociation <|-- EnabledByGeneProductAssociation click EnabledByAssociation href \"../EnabledByAssociation\" EnabledByGeneProductAssociation : evidence EnabledByGeneProductAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" EnabledByGeneProductAssociation : provenances EnabledByGeneProductAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" EnabledByGeneProductAssociation : term EnabledByGeneProductAssociation --> \"0..1\" GeneProductTermObject : term click GeneProductTermObject href \"../GeneProductTermObject\" EnabledByGeneProductAssociation : type Inheritance Association EnabledByAssociation EnabledByGeneProductAssociation Slots Name Cardinality and Range Description Inheritance term 0..1 GeneProductTermObject The gene product or complex that carries out the activity EnabledByAssociation type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:EnabledByGeneProductAssociation native gocam:EnabledByGeneProductAssociation LinkML Source Direct name: EnabledByGeneProductAssociation description: An association between an activity and a gene product from_schema: https://w3id.org/gocam is_a: EnabledByAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: GeneProductTermObject Induced name: EnabledByGeneProductAssociation description: An association between an activity and a gene product from_schema: https://w3id.org/gocam is_a: EnabledByAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: GeneProductTermObject attributes: term: name: term description: The gene product or complex that carries out the activity from_schema: https://w3id.org/gocam alias: term owner: EnabledByGeneProductAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: GeneProductTermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: EnabledByGeneProductAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: EnabledByGeneProductAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: EnabledByGeneProductAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Class: EnabledByGeneProductAssociation"},{"location":"EnabledByGeneProductAssociation/#class-enabledbygeneproductassociation","text":"An association between an activity and a gene product URI: gocam:EnabledByGeneProductAssociation classDiagram class EnabledByGeneProductAssociation click EnabledByGeneProductAssociation href \"../EnabledByGeneProductAssociation\" EnabledByAssociation <|-- EnabledByGeneProductAssociation click EnabledByAssociation href \"../EnabledByAssociation\" EnabledByGeneProductAssociation : evidence EnabledByGeneProductAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" EnabledByGeneProductAssociation : provenances EnabledByGeneProductAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" EnabledByGeneProductAssociation : term EnabledByGeneProductAssociation --> \"0..1\" GeneProductTermObject : term click GeneProductTermObject href \"../GeneProductTermObject\" EnabledByGeneProductAssociation : type","title":"Class: EnabledByGeneProductAssociation"},{"location":"EnabledByGeneProductAssociation/#inheritance","text":"Association EnabledByAssociation EnabledByGeneProductAssociation","title":"Inheritance"},{"location":"EnabledByGeneProductAssociation/#slots","text":"Name Cardinality and Range Description Inheritance term 0..1 GeneProductTermObject The gene product or complex that carries out the activity EnabledByAssociation type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association","title":"Slots"},{"location":"EnabledByGeneProductAssociation/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"EnabledByGeneProductAssociation/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"EnabledByGeneProductAssociation/#mappings","text":"Mapping Type Mapped Value self gocam:EnabledByGeneProductAssociation native gocam:EnabledByGeneProductAssociation","title":"Mappings"},{"location":"EnabledByGeneProductAssociation/#linkml-source","text":"","title":"LinkML Source"},{"location":"EnabledByGeneProductAssociation/#direct","text":"name: EnabledByGeneProductAssociation description: An association between an activity and a gene product from_schema: https://w3id.org/gocam is_a: EnabledByAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: GeneProductTermObject","title":"Direct"},{"location":"EnabledByGeneProductAssociation/#induced","text":"name: EnabledByGeneProductAssociation description: An association between an activity and a gene product from_schema: https://w3id.org/gocam is_a: EnabledByAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: GeneProductTermObject attributes: term: name: term description: The gene product or complex that carries out the activity from_schema: https://w3id.org/gocam alias: term owner: EnabledByGeneProductAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: GeneProductTermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: EnabledByGeneProductAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: EnabledByGeneProductAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: EnabledByGeneProductAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Induced"},{"location":"EnabledByProteinComplexAssociation/","text":"Class: EnabledByProteinComplexAssociation An association between an activity and a protein complex URI: gocam:EnabledByProteinComplexAssociation classDiagram class EnabledByProteinComplexAssociation click EnabledByProteinComplexAssociation href \"../EnabledByProteinComplexAssociation\" EnabledByAssociation <|-- EnabledByProteinComplexAssociation click EnabledByAssociation href \"../EnabledByAssociation\" EnabledByProteinComplexAssociation : evidence EnabledByProteinComplexAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" EnabledByProteinComplexAssociation : members EnabledByProteinComplexAssociation --> \"*\" GeneProductTermObject : members click GeneProductTermObject href \"../GeneProductTermObject\" EnabledByProteinComplexAssociation : provenances EnabledByProteinComplexAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" EnabledByProteinComplexAssociation : term EnabledByProteinComplexAssociation --> \"0..1\" ProteinComplexTermObject : term click ProteinComplexTermObject href \"../ProteinComplexTermObject\" EnabledByProteinComplexAssociation : type Inheritance Association EnabledByAssociation EnabledByProteinComplexAssociation Slots Name Cardinality and Range Description Inheritance members * GeneProductTermObject The gene products that are part of the complex direct term 0..1 ProteinComplexTermObject The gene product or complex that carries out the activity EnabledByAssociation type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:EnabledByProteinComplexAssociation native gocam:EnabledByProteinComplexAssociation LinkML Source Direct name: EnabledByProteinComplexAssociation description: An association between an activity and a protein complex from_schema: https://w3id.org/gocam is_a: EnabledByAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: ProteinComplexTermObject attributes: members: name: members description: The gene products that are part of the complex from_schema: https://w3id.org/gocam rank: 1000 multivalued: true domain_of: - EnabledByProteinComplexAssociation range: GeneProductTermObject Induced name: EnabledByProteinComplexAssociation description: An association between an activity and a protein complex from_schema: https://w3id.org/gocam is_a: EnabledByAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: ProteinComplexTermObject attributes: members: name: members description: The gene products that are part of the complex from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: members owner: EnabledByProteinComplexAssociation domain_of: - EnabledByProteinComplexAssociation range: GeneProductTermObject term: name: term description: The gene product or complex that carries out the activity from_schema: https://w3id.org/gocam alias: term owner: EnabledByProteinComplexAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: ProteinComplexTermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: EnabledByProteinComplexAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: EnabledByProteinComplexAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: EnabledByProteinComplexAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Class: EnabledByProteinComplexAssociation"},{"location":"EnabledByProteinComplexAssociation/#class-enabledbyproteincomplexassociation","text":"An association between an activity and a protein complex URI: gocam:EnabledByProteinComplexAssociation classDiagram class EnabledByProteinComplexAssociation click EnabledByProteinComplexAssociation href \"../EnabledByProteinComplexAssociation\" EnabledByAssociation <|-- EnabledByProteinComplexAssociation click EnabledByAssociation href \"../EnabledByAssociation\" EnabledByProteinComplexAssociation : evidence EnabledByProteinComplexAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" EnabledByProteinComplexAssociation : members EnabledByProteinComplexAssociation --> \"*\" GeneProductTermObject : members click GeneProductTermObject href \"../GeneProductTermObject\" EnabledByProteinComplexAssociation : provenances EnabledByProteinComplexAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" EnabledByProteinComplexAssociation : term EnabledByProteinComplexAssociation --> \"0..1\" ProteinComplexTermObject : term click ProteinComplexTermObject href \"../ProteinComplexTermObject\" EnabledByProteinComplexAssociation : type","title":"Class: EnabledByProteinComplexAssociation"},{"location":"EnabledByProteinComplexAssociation/#inheritance","text":"Association EnabledByAssociation EnabledByProteinComplexAssociation","title":"Inheritance"},{"location":"EnabledByProteinComplexAssociation/#slots","text":"Name Cardinality and Range Description Inheritance members * GeneProductTermObject The gene products that are part of the complex direct term 0..1 ProteinComplexTermObject The gene product or complex that carries out the activity EnabledByAssociation type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association","title":"Slots"},{"location":"EnabledByProteinComplexAssociation/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"EnabledByProteinComplexAssociation/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"EnabledByProteinComplexAssociation/#mappings","text":"Mapping Type Mapped Value self gocam:EnabledByProteinComplexAssociation native gocam:EnabledByProteinComplexAssociation","title":"Mappings"},{"location":"EnabledByProteinComplexAssociation/#linkml-source","text":"","title":"LinkML Source"},{"location":"EnabledByProteinComplexAssociation/#direct","text":"name: EnabledByProteinComplexAssociation description: An association between an activity and a protein complex from_schema: https://w3id.org/gocam is_a: EnabledByAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: ProteinComplexTermObject attributes: members: name: members description: The gene products that are part of the complex from_schema: https://w3id.org/gocam rank: 1000 multivalued: true domain_of: - EnabledByProteinComplexAssociation range: GeneProductTermObject","title":"Direct"},{"location":"EnabledByProteinComplexAssociation/#induced","text":"name: EnabledByProteinComplexAssociation description: An association between an activity and a protein complex from_schema: https://w3id.org/gocam is_a: EnabledByAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: ProteinComplexTermObject attributes: members: name: members description: The gene products that are part of the complex from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: members owner: EnabledByProteinComplexAssociation domain_of: - EnabledByProteinComplexAssociation range: GeneProductTermObject term: name: term description: The gene product or complex that carries out the activity from_schema: https://w3id.org/gocam alias: term owner: EnabledByProteinComplexAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: ProteinComplexTermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: EnabledByProteinComplexAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: EnabledByProteinComplexAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: EnabledByProteinComplexAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Induced"},{"location":"EvidenceItem/","text":"Class: EvidenceItem An individual piece of evidence that is associated with an assertion in a model URI: gocam:EvidenceItem classDiagram class EvidenceItem click EvidenceItem href \"../EvidenceItem\" EvidenceItem : provenances EvidenceItem --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" EvidenceItem : reference EvidenceItem --> \"0..1\" PublicationObject : reference click PublicationObject href \"../PublicationObject\" EvidenceItem : term EvidenceItem --> \"0..1\" EvidenceTermObject : term click EvidenceTermObject href \"../EvidenceTermObject\" EvidenceItem : with_objects EvidenceItem --> \"*\" Object : with_objects click Object href \"../Object\" Slots Name Cardinality and Range Description Inheritance term 0..1 EvidenceTermObject The ECO term representing the type of evidence direct reference 0..1 PublicationObject The publication of reference that describes the evidence direct with_objects * Object Supporting database entities or terms direct provenances * ProvenanceInfo Provenance about the assertion, e direct Usages used by used in type used Association evidence range EvidenceItem EnabledByAssociation evidence range EvidenceItem EnabledByGeneProductAssociation evidence range EvidenceItem EnabledByProteinComplexAssociation evidence range EvidenceItem CausalAssociation evidence range EvidenceItem TermAssociation evidence range EvidenceItem MolecularFunctionAssociation evidence range EvidenceItem BiologicalProcessAssociation evidence range EvidenceItem CellularAnatomicalEntityAssociation evidence range EvidenceItem CellTypeAssociation evidence range EvidenceItem GrossAnatomyAssociation evidence range EvidenceItem MoleculeAssociation evidence range EvidenceItem Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:EvidenceItem native gocam:EvidenceItem LinkML Source Direct name: EvidenceItem description: An individual piece of evidence that is associated with an assertion in a model from_schema: https://w3id.org/gocam attributes: term: name: term description: The ECO term representing the type of evidence from_schema: https://w3id.org/gocam rank: 1000 domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: EvidenceTermObject reference: name: reference description: The publication of reference that describes the evidence from_schema: https://w3id.org/gocam rank: 1000 domain_of: - EvidenceItem range: PublicationObject with_objects: name: with_objects description: Supporting database entities or terms from_schema: https://w3id.org/gocam aliases: - with - with/from rank: 1000 multivalued: true domain_of: - EvidenceItem range: Object provenances: name: provenances description: Provenance about the assertion, e.g. who made it from_schema: https://w3id.org/gocam multivalued: true domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true Induced name: EvidenceItem description: An individual piece of evidence that is associated with an assertion in a model from_schema: https://w3id.org/gocam attributes: term: name: term description: The ECO term representing the type of evidence from_schema: https://w3id.org/gocam rank: 1000 alias: term owner: EvidenceItem domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: EvidenceTermObject reference: name: reference description: The publication of reference that describes the evidence from_schema: https://w3id.org/gocam rank: 1000 alias: reference owner: EvidenceItem domain_of: - EvidenceItem range: PublicationObject with_objects: name: with_objects description: Supporting database entities or terms from_schema: https://w3id.org/gocam aliases: - with - with/from rank: 1000 multivalued: true alias: with_objects owner: EvidenceItem domain_of: - EvidenceItem range: Object provenances: name: provenances description: Provenance about the assertion, e.g. who made it from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: EvidenceItem domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Class: EvidenceItem"},{"location":"EvidenceItem/#class-evidenceitem","text":"An individual piece of evidence that is associated with an assertion in a model URI: gocam:EvidenceItem classDiagram class EvidenceItem click EvidenceItem href \"../EvidenceItem\" EvidenceItem : provenances EvidenceItem --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" EvidenceItem : reference EvidenceItem --> \"0..1\" PublicationObject : reference click PublicationObject href \"../PublicationObject\" EvidenceItem : term EvidenceItem --> \"0..1\" EvidenceTermObject : term click EvidenceTermObject href \"../EvidenceTermObject\" EvidenceItem : with_objects EvidenceItem --> \"*\" Object : with_objects click Object href \"../Object\"","title":"Class: EvidenceItem"},{"location":"EvidenceItem/#slots","text":"Name Cardinality and Range Description Inheritance term 0..1 EvidenceTermObject The ECO term representing the type of evidence direct reference 0..1 PublicationObject The publication of reference that describes the evidence direct with_objects * Object Supporting database entities or terms direct provenances * ProvenanceInfo Provenance about the assertion, e direct","title":"Slots"},{"location":"EvidenceItem/#usages","text":"used by used in type used Association evidence range EvidenceItem EnabledByAssociation evidence range EvidenceItem EnabledByGeneProductAssociation evidence range EvidenceItem EnabledByProteinComplexAssociation evidence range EvidenceItem CausalAssociation evidence range EvidenceItem TermAssociation evidence range EvidenceItem MolecularFunctionAssociation evidence range EvidenceItem BiologicalProcessAssociation evidence range EvidenceItem CellularAnatomicalEntityAssociation evidence range EvidenceItem CellTypeAssociation evidence range EvidenceItem GrossAnatomyAssociation evidence range EvidenceItem MoleculeAssociation evidence range EvidenceItem","title":"Usages"},{"location":"EvidenceItem/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"EvidenceItem/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"EvidenceItem/#mappings","text":"Mapping Type Mapped Value self gocam:EvidenceItem native gocam:EvidenceItem","title":"Mappings"},{"location":"EvidenceItem/#linkml-source","text":"","title":"LinkML Source"},{"location":"EvidenceItem/#direct","text":"name: EvidenceItem description: An individual piece of evidence that is associated with an assertion in a model from_schema: https://w3id.org/gocam attributes: term: name: term description: The ECO term representing the type of evidence from_schema: https://w3id.org/gocam rank: 1000 domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: EvidenceTermObject reference: name: reference description: The publication of reference that describes the evidence from_schema: https://w3id.org/gocam rank: 1000 domain_of: - EvidenceItem range: PublicationObject with_objects: name: with_objects description: Supporting database entities or terms from_schema: https://w3id.org/gocam aliases: - with - with/from rank: 1000 multivalued: true domain_of: - EvidenceItem range: Object provenances: name: provenances description: Provenance about the assertion, e.g. who made it from_schema: https://w3id.org/gocam multivalued: true domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Direct"},{"location":"EvidenceItem/#induced","text":"name: EvidenceItem description: An individual piece of evidence that is associated with an assertion in a model from_schema: https://w3id.org/gocam attributes: term: name: term description: The ECO term representing the type of evidence from_schema: https://w3id.org/gocam rank: 1000 alias: term owner: EvidenceItem domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: EvidenceTermObject reference: name: reference description: The publication of reference that describes the evidence from_schema: https://w3id.org/gocam rank: 1000 alias: reference owner: EvidenceItem domain_of: - EvidenceItem range: PublicationObject with_objects: name: with_objects description: Supporting database entities or terms from_schema: https://w3id.org/gocam aliases: - with - with/from rank: 1000 multivalued: true alias: with_objects owner: EvidenceItem domain_of: - EvidenceItem range: Object provenances: name: provenances description: Provenance about the assertion, e.g. who made it from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: EvidenceItem domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Induced"},{"location":"EvidenceTermObject/","text":"Class: EvidenceTermObject A term object that represents an evidence term from ECO URI: gocam:EvidenceTermObject classDiagram class EvidenceTermObject click EvidenceTermObject href \"../EvidenceTermObject\" TermObject <|-- EvidenceTermObject click TermObject href \"../TermObject\" EvidenceTermObject : id EvidenceTermObject : label EvidenceTermObject : obsolete EvidenceTermObject : type Inheritance Object TermObject EvidenceTermObject Slots Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object Usages used by used in type used EvidenceItem term range EvidenceTermObject Identifier and Mapping Information Valid ID Prefixes Instances of this class should have identifiers with one of the following prefixes: ECO Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:EvidenceTermObject native gocam:EvidenceTermObject LinkML Source Direct name: EvidenceTermObject id_prefixes: - ECO description: A term object that represents an evidence term from ECO from_schema: https://w3id.org/gocam is_a: TermObject Induced name: EvidenceTermObject id_prefixes: - ECO description: A term object that represents an evidence term from ECO from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: EvidenceTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: EvidenceTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: EvidenceTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: EvidenceTermObject domain_of: - Object range: boolean","title":"Class: EvidenceTermObject"},{"location":"EvidenceTermObject/#class-evidencetermobject","text":"A term object that represents an evidence term from ECO URI: gocam:EvidenceTermObject classDiagram class EvidenceTermObject click EvidenceTermObject href \"../EvidenceTermObject\" TermObject <|-- EvidenceTermObject click TermObject href \"../TermObject\" EvidenceTermObject : id EvidenceTermObject : label EvidenceTermObject : obsolete EvidenceTermObject : type","title":"Class: EvidenceTermObject"},{"location":"EvidenceTermObject/#inheritance","text":"Object TermObject EvidenceTermObject","title":"Inheritance"},{"location":"EvidenceTermObject/#slots","text":"Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object","title":"Slots"},{"location":"EvidenceTermObject/#usages","text":"used by used in type used EvidenceItem term range EvidenceTermObject","title":"Usages"},{"location":"EvidenceTermObject/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"EvidenceTermObject/#valid-id-prefixes","text":"Instances of this class should have identifiers with one of the following prefixes: ECO","title":"Valid ID Prefixes"},{"location":"EvidenceTermObject/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"EvidenceTermObject/#mappings","text":"Mapping Type Mapped Value self gocam:EvidenceTermObject native gocam:EvidenceTermObject","title":"Mappings"},{"location":"EvidenceTermObject/#linkml-source","text":"","title":"LinkML Source"},{"location":"EvidenceTermObject/#direct","text":"name: EvidenceTermObject id_prefixes: - ECO description: A term object that represents an evidence term from ECO from_schema: https://w3id.org/gocam is_a: TermObject","title":"Direct"},{"location":"EvidenceTermObject/#induced","text":"name: EvidenceTermObject id_prefixes: - ECO description: A term object that represents an evidence term from ECO from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: EvidenceTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: EvidenceTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: EvidenceTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: EvidenceTermObject domain_of: - Object range: boolean","title":"Induced"},{"location":"Float/","text":"Type: Float A real number that conforms to the xsd:float specification URI: xsd:float base : float uri : xsd:float Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam","title":"Type: Float"},{"location":"Float/#type-float","text":"A real number that conforms to the xsd:float specification URI: xsd:float base : float uri : xsd:float","title":"Type: Float"},{"location":"Float/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Float/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"GeneProductTermObject/","text":"Class: GeneProductTermObject A term object that represents a gene product term from GO or UniProtKB URI: gocam:GeneProductTermObject classDiagram class GeneProductTermObject click GeneProductTermObject href \"../GeneProductTermObject\" InformationBiomacromoleculeTermObject <|-- GeneProductTermObject click InformationBiomacromoleculeTermObject href \"../InformationBiomacromoleculeTermObject\" GeneProductTermObject : id GeneProductTermObject : label GeneProductTermObject : obsolete GeneProductTermObject : type Inheritance Object TermObject InformationBiomacromoleculeTermObject GeneProductTermObject Slots Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object Usages used by used in type used EnabledByGeneProductAssociation term range GeneProductTermObject EnabledByProteinComplexAssociation members range GeneProductTermObject Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:GeneProductTermObject native gocam:GeneProductTermObject LinkML Source Direct name: GeneProductTermObject description: A term object that represents a gene product term from GO or UniProtKB from_schema: https://w3id.org/gocam is_a: InformationBiomacromoleculeTermObject Induced name: GeneProductTermObject description: A term object that represents a gene product term from GO or UniProtKB from_schema: https://w3id.org/gocam is_a: InformationBiomacromoleculeTermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: GeneProductTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: GeneProductTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: GeneProductTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: GeneProductTermObject domain_of: - Object range: boolean","title":"Class: GeneProductTermObject"},{"location":"GeneProductTermObject/#class-geneproducttermobject","text":"A term object that represents a gene product term from GO or UniProtKB URI: gocam:GeneProductTermObject classDiagram class GeneProductTermObject click GeneProductTermObject href \"../GeneProductTermObject\" InformationBiomacromoleculeTermObject <|-- GeneProductTermObject click InformationBiomacromoleculeTermObject href \"../InformationBiomacromoleculeTermObject\" GeneProductTermObject : id GeneProductTermObject : label GeneProductTermObject : obsolete GeneProductTermObject : type","title":"Class: GeneProductTermObject"},{"location":"GeneProductTermObject/#inheritance","text":"Object TermObject InformationBiomacromoleculeTermObject GeneProductTermObject","title":"Inheritance"},{"location":"GeneProductTermObject/#slots","text":"Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object","title":"Slots"},{"location":"GeneProductTermObject/#usages","text":"used by used in type used EnabledByGeneProductAssociation term range GeneProductTermObject EnabledByProteinComplexAssociation members range GeneProductTermObject","title":"Usages"},{"location":"GeneProductTermObject/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"GeneProductTermObject/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"GeneProductTermObject/#mappings","text":"Mapping Type Mapped Value self gocam:GeneProductTermObject native gocam:GeneProductTermObject","title":"Mappings"},{"location":"GeneProductTermObject/#linkml-source","text":"","title":"LinkML Source"},{"location":"GeneProductTermObject/#direct","text":"name: GeneProductTermObject description: A term object that represents a gene product term from GO or UniProtKB from_schema: https://w3id.org/gocam is_a: InformationBiomacromoleculeTermObject","title":"Direct"},{"location":"GeneProductTermObject/#induced","text":"name: GeneProductTermObject description: A term object that represents a gene product term from GO or UniProtKB from_schema: https://w3id.org/gocam is_a: InformationBiomacromoleculeTermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: GeneProductTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: GeneProductTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: GeneProductTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: GeneProductTermObject domain_of: - Object range: boolean","title":"Induced"},{"location":"GrossAnatomicalStructureTermObject/","text":"Class: GrossAnatomicalStructureTermObject A term object that represents a gross anatomical structure term from UBERON URI: gocam:GrossAnatomicalStructureTermObject classDiagram class GrossAnatomicalStructureTermObject click GrossAnatomicalStructureTermObject href \"../GrossAnatomicalStructureTermObject\" TermObject <|-- GrossAnatomicalStructureTermObject click TermObject href \"../TermObject\" GrossAnatomicalStructureTermObject : id GrossAnatomicalStructureTermObject : label GrossAnatomicalStructureTermObject : obsolete GrossAnatomicalStructureTermObject : type Inheritance Object TermObject GrossAnatomicalStructureTermObject Slots Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object Usages used by used in type used GrossAnatomyAssociation term range GrossAnatomicalStructureTermObject Identifier and Mapping Information Valid ID Prefixes Instances of this class should have identifiers with one of the following prefixes: UBERON PO FAO DDANAT Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:GrossAnatomicalStructureTermObject native gocam:GrossAnatomicalStructureTermObject LinkML Source Direct name: GrossAnatomicalStructureTermObject id_prefixes: - UBERON - PO - FAO - DDANAT description: A term object that represents a gross anatomical structure term from UBERON from_schema: https://w3id.org/gocam is_a: TermObject Induced name: GrossAnatomicalStructureTermObject id_prefixes: - UBERON - PO - FAO - DDANAT description: A term object that represents a gross anatomical structure term from UBERON from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: GrossAnatomicalStructureTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: GrossAnatomicalStructureTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: GrossAnatomicalStructureTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: GrossAnatomicalStructureTermObject domain_of: - Object range: boolean","title":"Class: GrossAnatomicalStructureTermObject"},{"location":"GrossAnatomicalStructureTermObject/#class-grossanatomicalstructuretermobject","text":"A term object that represents a gross anatomical structure term from UBERON URI: gocam:GrossAnatomicalStructureTermObject classDiagram class GrossAnatomicalStructureTermObject click GrossAnatomicalStructureTermObject href \"../GrossAnatomicalStructureTermObject\" TermObject <|-- GrossAnatomicalStructureTermObject click TermObject href \"../TermObject\" GrossAnatomicalStructureTermObject : id GrossAnatomicalStructureTermObject : label GrossAnatomicalStructureTermObject : obsolete GrossAnatomicalStructureTermObject : type","title":"Class: GrossAnatomicalStructureTermObject"},{"location":"GrossAnatomicalStructureTermObject/#inheritance","text":"Object TermObject GrossAnatomicalStructureTermObject","title":"Inheritance"},{"location":"GrossAnatomicalStructureTermObject/#slots","text":"Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object","title":"Slots"},{"location":"GrossAnatomicalStructureTermObject/#usages","text":"used by used in type used GrossAnatomyAssociation term range GrossAnatomicalStructureTermObject","title":"Usages"},{"location":"GrossAnatomicalStructureTermObject/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"GrossAnatomicalStructureTermObject/#valid-id-prefixes","text":"Instances of this class should have identifiers with one of the following prefixes: UBERON PO FAO DDANAT","title":"Valid ID Prefixes"},{"location":"GrossAnatomicalStructureTermObject/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"GrossAnatomicalStructureTermObject/#mappings","text":"Mapping Type Mapped Value self gocam:GrossAnatomicalStructureTermObject native gocam:GrossAnatomicalStructureTermObject","title":"Mappings"},{"location":"GrossAnatomicalStructureTermObject/#linkml-source","text":"","title":"LinkML Source"},{"location":"GrossAnatomicalStructureTermObject/#direct","text":"name: GrossAnatomicalStructureTermObject id_prefixes: - UBERON - PO - FAO - DDANAT description: A term object that represents a gross anatomical structure term from UBERON from_schema: https://w3id.org/gocam is_a: TermObject","title":"Direct"},{"location":"GrossAnatomicalStructureTermObject/#induced","text":"name: GrossAnatomicalStructureTermObject id_prefixes: - UBERON - PO - FAO - DDANAT description: A term object that represents a gross anatomical structure term from UBERON from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: GrossAnatomicalStructureTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: GrossAnatomicalStructureTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: GrossAnatomicalStructureTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: GrossAnatomicalStructureTermObject domain_of: - Object range: boolean","title":"Induced"},{"location":"GrossAnatomyAssociation/","text":"Class: GrossAnatomyAssociation An association between an activity and a gross anatomical structure term URI: gocam:GrossAnatomyAssociation classDiagram class GrossAnatomyAssociation click GrossAnatomyAssociation href \"../GrossAnatomyAssociation\" TermAssociation <|-- GrossAnatomyAssociation click TermAssociation href \"../TermAssociation\" GrossAnatomyAssociation : evidence GrossAnatomyAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" GrossAnatomyAssociation : provenances GrossAnatomyAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" GrossAnatomyAssociation : term GrossAnatomyAssociation --> \"0..1\" GrossAnatomicalStructureTermObject : term click GrossAnatomicalStructureTermObject href \"../GrossAnatomicalStructureTermObject\" GrossAnatomyAssociation : type Inheritance Association TermAssociation GrossAnatomyAssociation Slots Name Cardinality and Range Description Inheritance term 0..1 GrossAnatomicalStructureTermObject The ontology term that describes the nature of the association TermAssociation type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:GrossAnatomyAssociation native gocam:GrossAnatomyAssociation LinkML Source Direct name: GrossAnatomyAssociation description: An association between an activity and a gross anatomical structure term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: GrossAnatomicalStructureTermObject part_of: name: part_of range: GrossAnatomyAssociation Induced name: GrossAnatomyAssociation description: An association between an activity and a gross anatomical structure term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: GrossAnatomicalStructureTermObject part_of: name: part_of range: GrossAnatomyAssociation attributes: term: name: term description: The ontology term that describes the nature of the association from_schema: https://w3id.org/gocam alias: term owner: GrossAnatomyAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: GrossAnatomicalStructureTermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: GrossAnatomyAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: GrossAnatomyAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: GrossAnatomyAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Class: GrossAnatomyAssociation"},{"location":"GrossAnatomyAssociation/#class-grossanatomyassociation","text":"An association between an activity and a gross anatomical structure term URI: gocam:GrossAnatomyAssociation classDiagram class GrossAnatomyAssociation click GrossAnatomyAssociation href \"../GrossAnatomyAssociation\" TermAssociation <|-- GrossAnatomyAssociation click TermAssociation href \"../TermAssociation\" GrossAnatomyAssociation : evidence GrossAnatomyAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" GrossAnatomyAssociation : provenances GrossAnatomyAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" GrossAnatomyAssociation : term GrossAnatomyAssociation --> \"0..1\" GrossAnatomicalStructureTermObject : term click GrossAnatomicalStructureTermObject href \"../GrossAnatomicalStructureTermObject\" GrossAnatomyAssociation : type","title":"Class: GrossAnatomyAssociation"},{"location":"GrossAnatomyAssociation/#inheritance","text":"Association TermAssociation GrossAnatomyAssociation","title":"Inheritance"},{"location":"GrossAnatomyAssociation/#slots","text":"Name Cardinality and Range Description Inheritance term 0..1 GrossAnatomicalStructureTermObject The ontology term that describes the nature of the association TermAssociation type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association","title":"Slots"},{"location":"GrossAnatomyAssociation/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"GrossAnatomyAssociation/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"GrossAnatomyAssociation/#mappings","text":"Mapping Type Mapped Value self gocam:GrossAnatomyAssociation native gocam:GrossAnatomyAssociation","title":"Mappings"},{"location":"GrossAnatomyAssociation/#linkml-source","text":"","title":"LinkML Source"},{"location":"GrossAnatomyAssociation/#direct","text":"name: GrossAnatomyAssociation description: An association between an activity and a gross anatomical structure term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: GrossAnatomicalStructureTermObject part_of: name: part_of range: GrossAnatomyAssociation","title":"Direct"},{"location":"GrossAnatomyAssociation/#induced","text":"name: GrossAnatomyAssociation description: An association between an activity and a gross anatomical structure term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: GrossAnatomicalStructureTermObject part_of: name: part_of range: GrossAnatomyAssociation attributes: term: name: term description: The ontology term that describes the nature of the association from_schema: https://w3id.org/gocam alias: term owner: GrossAnatomyAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: GrossAnatomicalStructureTermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: GrossAnatomyAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: GrossAnatomyAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: GrossAnatomyAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Induced"},{"location":"InformationBiomacromoleculeCategory/","text":"Enum: InformationBiomacromoleculeCategory URI: InformationBiomacromoleculeCategory Permissible Values Value Meaning Description GeneOrReferenceProtein biolink.GeneOrGeneProduct ProteinIsoform None MacromolecularComplex None Unknown None Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam LinkML Source name: InformationBiomacromoleculeCategory from_schema: https://w3id.org/gocam rank: 1000 permissible_values: GeneOrReferenceProtein: text: GeneOrReferenceProtein meaning: biolink.GeneOrGeneProduct ProteinIsoform: text: ProteinIsoform MacromolecularComplex: text: MacromolecularComplex Unknown: text: Unknown","title":"Enum: InformationBiomacromoleculeCategory"},{"location":"InformationBiomacromoleculeCategory/#enum-informationbiomacromoleculecategory","text":"URI: InformationBiomacromoleculeCategory","title":"Enum: InformationBiomacromoleculeCategory"},{"location":"InformationBiomacromoleculeCategory/#permissible-values","text":"Value Meaning Description GeneOrReferenceProtein biolink.GeneOrGeneProduct ProteinIsoform None MacromolecularComplex None Unknown None","title":"Permissible Values"},{"location":"InformationBiomacromoleculeCategory/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"InformationBiomacromoleculeCategory/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"InformationBiomacromoleculeCategory/#linkml-source","text":"name: InformationBiomacromoleculeCategory from_schema: https://w3id.org/gocam rank: 1000 permissible_values: GeneOrReferenceProtein: text: GeneOrReferenceProtein meaning: biolink.GeneOrGeneProduct ProteinIsoform: text: ProteinIsoform MacromolecularComplex: text: MacromolecularComplex Unknown: text: Unknown","title":"LinkML Source"},{"location":"InformationBiomacromoleculeTermObject/","text":"Class: InformationBiomacromoleculeTermObject An abstract class for all information biomacromolecule term objects NOTE : this is an abstract class and should not be instantiated directly URI: gocam:InformationBiomacromoleculeTermObject classDiagram class InformationBiomacromoleculeTermObject click InformationBiomacromoleculeTermObject href \"../InformationBiomacromoleculeTermObject\" TermObject <|-- InformationBiomacromoleculeTermObject click TermObject href \"../TermObject\" InformationBiomacromoleculeTermObject <|-- GeneProductTermObject click GeneProductTermObject href \"../GeneProductTermObject\" InformationBiomacromoleculeTermObject <|-- ProteinComplexTermObject click ProteinComplexTermObject href \"../ProteinComplexTermObject\" InformationBiomacromoleculeTermObject : id InformationBiomacromoleculeTermObject : label InformationBiomacromoleculeTermObject : obsolete InformationBiomacromoleculeTermObject : type Inheritance Object TermObject InformationBiomacromoleculeTermObject GeneProductTermObject ProteinComplexTermObject Slots Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object Usages used by used in type used EnabledByAssociation term range InformationBiomacromoleculeTermObject Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:InformationBiomacromoleculeTermObject native gocam:InformationBiomacromoleculeTermObject LinkML Source Direct name: InformationBiomacromoleculeTermObject description: An abstract class for all information biomacromolecule term objects from_schema: https://w3id.org/gocam is_a: TermObject abstract: true Induced name: InformationBiomacromoleculeTermObject description: An abstract class for all information biomacromolecule term objects from_schema: https://w3id.org/gocam is_a: TermObject abstract: true attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: InformationBiomacromoleculeTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: InformationBiomacromoleculeTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: InformationBiomacromoleculeTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: InformationBiomacromoleculeTermObject domain_of: - Object range: boolean","title":"Class: InformationBiomacromoleculeTermObject"},{"location":"InformationBiomacromoleculeTermObject/#class-informationbiomacromoleculetermobject","text":"An abstract class for all information biomacromolecule term objects NOTE : this is an abstract class and should not be instantiated directly URI: gocam:InformationBiomacromoleculeTermObject classDiagram class InformationBiomacromoleculeTermObject click InformationBiomacromoleculeTermObject href \"../InformationBiomacromoleculeTermObject\" TermObject <|-- InformationBiomacromoleculeTermObject click TermObject href \"../TermObject\" InformationBiomacromoleculeTermObject <|-- GeneProductTermObject click GeneProductTermObject href \"../GeneProductTermObject\" InformationBiomacromoleculeTermObject <|-- ProteinComplexTermObject click ProteinComplexTermObject href \"../ProteinComplexTermObject\" InformationBiomacromoleculeTermObject : id InformationBiomacromoleculeTermObject : label InformationBiomacromoleculeTermObject : obsolete InformationBiomacromoleculeTermObject : type","title":"Class: InformationBiomacromoleculeTermObject"},{"location":"InformationBiomacromoleculeTermObject/#inheritance","text":"Object TermObject InformationBiomacromoleculeTermObject GeneProductTermObject ProteinComplexTermObject","title":"Inheritance"},{"location":"InformationBiomacromoleculeTermObject/#slots","text":"Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object","title":"Slots"},{"location":"InformationBiomacromoleculeTermObject/#usages","text":"used by used in type used EnabledByAssociation term range InformationBiomacromoleculeTermObject","title":"Usages"},{"location":"InformationBiomacromoleculeTermObject/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"InformationBiomacromoleculeTermObject/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"InformationBiomacromoleculeTermObject/#mappings","text":"Mapping Type Mapped Value self gocam:InformationBiomacromoleculeTermObject native gocam:InformationBiomacromoleculeTermObject","title":"Mappings"},{"location":"InformationBiomacromoleculeTermObject/#linkml-source","text":"","title":"LinkML Source"},{"location":"InformationBiomacromoleculeTermObject/#direct","text":"name: InformationBiomacromoleculeTermObject description: An abstract class for all information biomacromolecule term objects from_schema: https://w3id.org/gocam is_a: TermObject abstract: true","title":"Direct"},{"location":"InformationBiomacromoleculeTermObject/#induced","text":"name: InformationBiomacromoleculeTermObject description: An abstract class for all information biomacromolecule term objects from_schema: https://w3id.org/gocam is_a: TermObject abstract: true attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: InformationBiomacromoleculeTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: InformationBiomacromoleculeTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: InformationBiomacromoleculeTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: InformationBiomacromoleculeTermObject domain_of: - Object range: boolean","title":"Induced"},{"location":"Integer/","text":"Type: Integer An integer URI: xsd:integer base : int uri : xsd:integer Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam","title":"Type: Integer"},{"location":"Integer/#type-integer","text":"An integer URI: xsd:integer base : int uri : xsd:integer","title":"Type: Integer"},{"location":"Integer/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Integer/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"Jsonpath/","text":"Type: Jsonpath A string encoding a JSON Path. The value of the string MUST conform to JSON Point syntax and SHOULD dereference to zero or more valid objects within the current instance document when encoded in tree form. URI: xsd:string base : str uri : xsd:string repr : str Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam","title":"Type: Jsonpath"},{"location":"Jsonpath/#type-jsonpath","text":"A string encoding a JSON Path. The value of the string MUST conform to JSON Point syntax and SHOULD dereference to zero or more valid objects within the current instance document when encoded in tree form. URI: xsd:string base : str uri : xsd:string repr : str","title":"Type: Jsonpath"},{"location":"Jsonpath/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Jsonpath/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"Jsonpointer/","text":"Type: Jsonpointer A string encoding a JSON Pointer. The value of the string MUST conform to JSON Point syntax and SHOULD dereference to a valid object within the current instance document when encoded in tree form. URI: xsd:string base : str uri : xsd:string repr : str Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam","title":"Type: Jsonpointer"},{"location":"Jsonpointer/#type-jsonpointer","text":"A string encoding a JSON Pointer. The value of the string MUST conform to JSON Point syntax and SHOULD dereference to a valid object within the current instance document when encoded in tree form. URI: xsd:string base : str uri : xsd:string repr : str","title":"Type: Jsonpointer"},{"location":"Jsonpointer/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Jsonpointer/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"Model/","text":"Class: Model A model of a biological program consisting of a set of causally connected activities URI: gocam:Model classDiagram class Model click Model href \"../Model\" Model : activities Model --> \"*\" Activity : activities click Activity href \"../Activity\" Model : comments Model : id Model : objects Model --> \"*\" Object : objects click Object href \"../Object\" Model : provenances Model --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" Model : status Model --> \"0..1\" ModelStateEnum : status click ModelStateEnum href \"../ModelStateEnum\" Model : taxon Model --> \"0..1\" TaxonTermObject : taxon click TaxonTermObject href \"../TaxonTermObject\" Model : title Slots Name Cardinality and Range Description Inheritance id 1 Uriorcurie The identifier of the model direct title 0..1 String The human-readable descriptive title of the model direct taxon 0..1 TaxonTermObject The primary taxon that the model is about direct status 0..1 ModelStateEnum The status of the model direct comments * String Comments about the model direct activities * Activity All of the activities that are part of the model direct objects * Object All of the objects that are part of the model direct provenances * ProvenanceInfo Model-level provenance information direct Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:Model native gocam:Model LinkML Source Direct name: Model description: A model of a biological program consisting of a set of causally connected activities from_schema: https://w3id.org/gocam attributes: id: name: id description: The identifier of the model. Should be in gocam namespace. from_schema: https://w3id.org/gocam rank: 1000 identifier: true domain_of: - Model - Activity - Object range: uriorcurie required: true title: name: title description: The human-readable descriptive title of the model from_schema: https://w3id.org/gocam rank: 1000 slot_uri: dct:title domain_of: - Model taxon: name: taxon description: The primary taxon that the model is about from_schema: https://w3id.org/gocam rank: 1000 domain_of: - Model range: TaxonTermObject status: name: status description: The status of the model from_schema: https://w3id.org/gocam aliases: - model state rank: 1000 slot_uri: pav:status domain_of: - Model range: ModelStateEnum comments: name: comments description: Comments about the model from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:comment multivalued: true domain_of: - Model activities: name: activities description: All of the activities that are part of the model from_schema: https://w3id.org/gocam rank: 1000 multivalued: true domain_of: - Model range: Activity inlined: true inlined_as_list: true objects: name: objects description: All of the objects that are part of the model. This includes terms as well as publications and database objects like gene. This is not strictly part of the data managed by the model, it is for convenience, and should be refreshed from outside. from_schema: https://w3id.org/gocam rank: 1000 multivalued: true domain_of: - Model range: Object inlined: true inlined_as_list: true provenances: name: provenances description: Model-level provenance information from_schema: https://w3id.org/gocam rank: 1000 multivalued: true domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true Induced name: Model description: A model of a biological program consisting of a set of causally connected activities from_schema: https://w3id.org/gocam attributes: id: name: id description: The identifier of the model. Should be in gocam namespace. from_schema: https://w3id.org/gocam rank: 1000 identifier: true alias: id owner: Model domain_of: - Model - Activity - Object range: uriorcurie title: name: title description: The human-readable descriptive title of the model from_schema: https://w3id.org/gocam rank: 1000 slot_uri: dct:title alias: title owner: Model domain_of: - Model range: string taxon: name: taxon description: The primary taxon that the model is about from_schema: https://w3id.org/gocam rank: 1000 alias: taxon owner: Model domain_of: - Model range: TaxonTermObject status: name: status description: The status of the model from_schema: https://w3id.org/gocam aliases: - model state rank: 1000 slot_uri: pav:status alias: status owner: Model domain_of: - Model range: ModelStateEnum comments: name: comments description: Comments about the model from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:comment multivalued: true alias: comments owner: Model domain_of: - Model range: string activities: name: activities description: All of the activities that are part of the model from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: activities owner: Model domain_of: - Model range: Activity inlined_as_list: true objects: name: objects description: All of the objects that are part of the model. This includes terms as well as publications and database objects like gene. This is not strictly part of the data managed by the model, it is for convenience, and should be refreshed from outside. from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: objects owner: Model domain_of: - Model range: Object inlined_as_list: true provenances: name: provenances description: Model-level provenance information from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: provenances owner: Model domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined_as_list: true","title":"Class: Model"},{"location":"Model/#class-model","text":"A model of a biological program consisting of a set of causally connected activities URI: gocam:Model classDiagram class Model click Model href \"../Model\" Model : activities Model --> \"*\" Activity : activities click Activity href \"../Activity\" Model : comments Model : id Model : objects Model --> \"*\" Object : objects click Object href \"../Object\" Model : provenances Model --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" Model : status Model --> \"0..1\" ModelStateEnum : status click ModelStateEnum href \"../ModelStateEnum\" Model : taxon Model --> \"0..1\" TaxonTermObject : taxon click TaxonTermObject href \"../TaxonTermObject\" Model : title","title":"Class: Model"},{"location":"Model/#slots","text":"Name Cardinality and Range Description Inheritance id 1 Uriorcurie The identifier of the model direct title 0..1 String The human-readable descriptive title of the model direct taxon 0..1 TaxonTermObject The primary taxon that the model is about direct status 0..1 ModelStateEnum The status of the model direct comments * String Comments about the model direct activities * Activity All of the activities that are part of the model direct objects * Object All of the objects that are part of the model direct provenances * ProvenanceInfo Model-level provenance information direct","title":"Slots"},{"location":"Model/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Model/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"Model/#mappings","text":"Mapping Type Mapped Value self gocam:Model native gocam:Model","title":"Mappings"},{"location":"Model/#linkml-source","text":"","title":"LinkML Source"},{"location":"Model/#direct","text":"name: Model description: A model of a biological program consisting of a set of causally connected activities from_schema: https://w3id.org/gocam attributes: id: name: id description: The identifier of the model. Should be in gocam namespace. from_schema: https://w3id.org/gocam rank: 1000 identifier: true domain_of: - Model - Activity - Object range: uriorcurie required: true title: name: title description: The human-readable descriptive title of the model from_schema: https://w3id.org/gocam rank: 1000 slot_uri: dct:title domain_of: - Model taxon: name: taxon description: The primary taxon that the model is about from_schema: https://w3id.org/gocam rank: 1000 domain_of: - Model range: TaxonTermObject status: name: status description: The status of the model from_schema: https://w3id.org/gocam aliases: - model state rank: 1000 slot_uri: pav:status domain_of: - Model range: ModelStateEnum comments: name: comments description: Comments about the model from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:comment multivalued: true domain_of: - Model activities: name: activities description: All of the activities that are part of the model from_schema: https://w3id.org/gocam rank: 1000 multivalued: true domain_of: - Model range: Activity inlined: true inlined_as_list: true objects: name: objects description: All of the objects that are part of the model. This includes terms as well as publications and database objects like gene. This is not strictly part of the data managed by the model, it is for convenience, and should be refreshed from outside. from_schema: https://w3id.org/gocam rank: 1000 multivalued: true domain_of: - Model range: Object inlined: true inlined_as_list: true provenances: name: provenances description: Model-level provenance information from_schema: https://w3id.org/gocam rank: 1000 multivalued: true domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Direct"},{"location":"Model/#induced","text":"name: Model description: A model of a biological program consisting of a set of causally connected activities from_schema: https://w3id.org/gocam attributes: id: name: id description: The identifier of the model. Should be in gocam namespace. from_schema: https://w3id.org/gocam rank: 1000 identifier: true alias: id owner: Model domain_of: - Model - Activity - Object range: uriorcurie title: name: title description: The human-readable descriptive title of the model from_schema: https://w3id.org/gocam rank: 1000 slot_uri: dct:title alias: title owner: Model domain_of: - Model range: string taxon: name: taxon description: The primary taxon that the model is about from_schema: https://w3id.org/gocam rank: 1000 alias: taxon owner: Model domain_of: - Model range: TaxonTermObject status: name: status description: The status of the model from_schema: https://w3id.org/gocam aliases: - model state rank: 1000 slot_uri: pav:status alias: status owner: Model domain_of: - Model range: ModelStateEnum comments: name: comments description: Comments about the model from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:comment multivalued: true alias: comments owner: Model domain_of: - Model range: string activities: name: activities description: All of the activities that are part of the model from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: activities owner: Model domain_of: - Model range: Activity inlined_as_list: true objects: name: objects description: All of the objects that are part of the model. This includes terms as well as publications and database objects like gene. This is not strictly part of the data managed by the model, it is for convenience, and should be refreshed from outside. from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: objects owner: Model domain_of: - Model range: Object inlined_as_list: true provenances: name: provenances description: Model-level provenance information from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: provenances owner: Model domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined_as_list: true","title":"Induced"},{"location":"ModelStateEnum/","text":"Enum: ModelStateEnum Status of a model URI: ModelStateEnum Permissible Values Value Meaning Description production None development None Slots Name Description status The status of the model Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam LinkML Source name: ModelStateEnum description: Status of a model from_schema: https://w3id.org/gocam rank: 1000 permissible_values: production: text: production development: text: development","title":"Enum: ModelStateEnum"},{"location":"ModelStateEnum/#enum-modelstateenum","text":"Status of a model URI: ModelStateEnum","title":"Enum: ModelStateEnum"},{"location":"ModelStateEnum/#permissible-values","text":"Value Meaning Description production None development None","title":"Permissible Values"},{"location":"ModelStateEnum/#slots","text":"Name Description status The status of the model","title":"Slots"},{"location":"ModelStateEnum/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"ModelStateEnum/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"ModelStateEnum/#linkml-source","text":"name: ModelStateEnum description: Status of a model from_schema: https://w3id.org/gocam rank: 1000 permissible_values: production: text: production development: text: development","title":"LinkML Source"},{"location":"MolecularFunctionAssociation/","text":"Class: MolecularFunctionAssociation An association between an activity and a molecular function term URI: gocam:MolecularFunctionAssociation classDiagram class MolecularFunctionAssociation click MolecularFunctionAssociation href \"../MolecularFunctionAssociation\" TermAssociation <|-- MolecularFunctionAssociation click TermAssociation href \"../TermAssociation\" MolecularFunctionAssociation : evidence MolecularFunctionAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" MolecularFunctionAssociation : provenances MolecularFunctionAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" MolecularFunctionAssociation : term MolecularFunctionAssociation --> \"0..1\" MolecularFunctionTermObject : term click MolecularFunctionTermObject href \"../MolecularFunctionTermObject\" MolecularFunctionAssociation : type Inheritance Association TermAssociation MolecularFunctionAssociation Slots Name Cardinality and Range Description Inheritance term 0..1 MolecularFunctionTermObject The ontology term that describes the nature of the association TermAssociation type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association Usages used by used in type used Activity molecular_function range MolecularFunctionAssociation TODOs account for non-MF activity types in Reactome Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:MolecularFunctionAssociation native gocam:MolecularFunctionAssociation LinkML Source Direct name: MolecularFunctionAssociation description: An association between an activity and a molecular function term todos: - account for non-MF activity types in Reactome from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: MolecularFunctionTermObject Induced name: MolecularFunctionAssociation description: An association between an activity and a molecular function term todos: - account for non-MF activity types in Reactome from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: MolecularFunctionTermObject attributes: term: name: term description: The ontology term that describes the nature of the association from_schema: https://w3id.org/gocam alias: term owner: MolecularFunctionAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: MolecularFunctionTermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: MolecularFunctionAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: MolecularFunctionAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: MolecularFunctionAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Class: MolecularFunctionAssociation"},{"location":"MolecularFunctionAssociation/#class-molecularfunctionassociation","text":"An association between an activity and a molecular function term URI: gocam:MolecularFunctionAssociation classDiagram class MolecularFunctionAssociation click MolecularFunctionAssociation href \"../MolecularFunctionAssociation\" TermAssociation <|-- MolecularFunctionAssociation click TermAssociation href \"../TermAssociation\" MolecularFunctionAssociation : evidence MolecularFunctionAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" MolecularFunctionAssociation : provenances MolecularFunctionAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" MolecularFunctionAssociation : term MolecularFunctionAssociation --> \"0..1\" MolecularFunctionTermObject : term click MolecularFunctionTermObject href \"../MolecularFunctionTermObject\" MolecularFunctionAssociation : type","title":"Class: MolecularFunctionAssociation"},{"location":"MolecularFunctionAssociation/#inheritance","text":"Association TermAssociation MolecularFunctionAssociation","title":"Inheritance"},{"location":"MolecularFunctionAssociation/#slots","text":"Name Cardinality and Range Description Inheritance term 0..1 MolecularFunctionTermObject The ontology term that describes the nature of the association TermAssociation type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association","title":"Slots"},{"location":"MolecularFunctionAssociation/#usages","text":"used by used in type used Activity molecular_function range MolecularFunctionAssociation","title":"Usages"},{"location":"MolecularFunctionAssociation/#todos","text":"account for non-MF activity types in Reactome","title":"TODOs"},{"location":"MolecularFunctionAssociation/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"MolecularFunctionAssociation/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"MolecularFunctionAssociation/#mappings","text":"Mapping Type Mapped Value self gocam:MolecularFunctionAssociation native gocam:MolecularFunctionAssociation","title":"Mappings"},{"location":"MolecularFunctionAssociation/#linkml-source","text":"","title":"LinkML Source"},{"location":"MolecularFunctionAssociation/#direct","text":"name: MolecularFunctionAssociation description: An association between an activity and a molecular function term todos: - account for non-MF activity types in Reactome from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: MolecularFunctionTermObject","title":"Direct"},{"location":"MolecularFunctionAssociation/#induced","text":"name: MolecularFunctionAssociation description: An association between an activity and a molecular function term todos: - account for non-MF activity types in Reactome from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: MolecularFunctionTermObject attributes: term: name: term description: The ontology term that describes the nature of the association from_schema: https://w3id.org/gocam alias: term owner: MolecularFunctionAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: MolecularFunctionTermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: MolecularFunctionAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: MolecularFunctionAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: MolecularFunctionAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Induced"},{"location":"MolecularFunctionTermObject/","text":"Class: MolecularFunctionTermObject A term object that represents a molecular function term from GO URI: gocam:MolecularFunctionTermObject classDiagram class MolecularFunctionTermObject click MolecularFunctionTermObject href \"../MolecularFunctionTermObject\" TermObject <|-- MolecularFunctionTermObject click TermObject href \"../TermObject\" MolecularFunctionTermObject : id MolecularFunctionTermObject : label MolecularFunctionTermObject : obsolete MolecularFunctionTermObject : type Inheritance Object TermObject MolecularFunctionTermObject Slots Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object Usages used by used in type used MolecularFunctionAssociation term range MolecularFunctionTermObject Identifier and Mapping Information Valid ID Prefixes Instances of this class should have identifiers with one of the following prefixes: GO Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:MolecularFunctionTermObject native gocam:MolecularFunctionTermObject LinkML Source Direct name: MolecularFunctionTermObject id_prefixes: - GO description: A term object that represents a molecular function term from GO from_schema: https://w3id.org/gocam is_a: TermObject Induced name: MolecularFunctionTermObject id_prefixes: - GO description: A term object that represents a molecular function term from GO from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: MolecularFunctionTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: MolecularFunctionTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: MolecularFunctionTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: MolecularFunctionTermObject domain_of: - Object range: boolean","title":"Class: MolecularFunctionTermObject"},{"location":"MolecularFunctionTermObject/#class-molecularfunctiontermobject","text":"A term object that represents a molecular function term from GO URI: gocam:MolecularFunctionTermObject classDiagram class MolecularFunctionTermObject click MolecularFunctionTermObject href \"../MolecularFunctionTermObject\" TermObject <|-- MolecularFunctionTermObject click TermObject href \"../TermObject\" MolecularFunctionTermObject : id MolecularFunctionTermObject : label MolecularFunctionTermObject : obsolete MolecularFunctionTermObject : type","title":"Class: MolecularFunctionTermObject"},{"location":"MolecularFunctionTermObject/#inheritance","text":"Object TermObject MolecularFunctionTermObject","title":"Inheritance"},{"location":"MolecularFunctionTermObject/#slots","text":"Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object","title":"Slots"},{"location":"MolecularFunctionTermObject/#usages","text":"used by used in type used MolecularFunctionAssociation term range MolecularFunctionTermObject","title":"Usages"},{"location":"MolecularFunctionTermObject/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"MolecularFunctionTermObject/#valid-id-prefixes","text":"Instances of this class should have identifiers with one of the following prefixes: GO","title":"Valid ID Prefixes"},{"location":"MolecularFunctionTermObject/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"MolecularFunctionTermObject/#mappings","text":"Mapping Type Mapped Value self gocam:MolecularFunctionTermObject native gocam:MolecularFunctionTermObject","title":"Mappings"},{"location":"MolecularFunctionTermObject/#linkml-source","text":"","title":"LinkML Source"},{"location":"MolecularFunctionTermObject/#direct","text":"name: MolecularFunctionTermObject id_prefixes: - GO description: A term object that represents a molecular function term from GO from_schema: https://w3id.org/gocam is_a: TermObject","title":"Direct"},{"location":"MolecularFunctionTermObject/#induced","text":"name: MolecularFunctionTermObject id_prefixes: - GO description: A term object that represents a molecular function term from GO from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: MolecularFunctionTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: MolecularFunctionTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: MolecularFunctionTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: MolecularFunctionTermObject domain_of: - Object range: boolean","title":"Induced"},{"location":"MoleculeAssociation/","text":"Class: MoleculeAssociation An association between an activity and a molecule term URI: gocam:MoleculeAssociation classDiagram class MoleculeAssociation click MoleculeAssociation href \"../MoleculeAssociation\" TermAssociation <|-- MoleculeAssociation click TermAssociation href \"../TermAssociation\" MoleculeAssociation : evidence MoleculeAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" MoleculeAssociation : provenances MoleculeAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" MoleculeAssociation : term MoleculeAssociation --> \"0..1\" MoleculeTermObject : term click MoleculeTermObject href \"../MoleculeTermObject\" MoleculeAssociation : type Inheritance Association TermAssociation MoleculeAssociation Slots Name Cardinality and Range Description Inheritance term 0..1 MoleculeTermObject The ontology term that describes the nature of the association TermAssociation type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association Usages used by used in type used Activity has_input range MoleculeAssociation Activity has_primary_input range MoleculeAssociation Activity has_output range MoleculeAssociation Activity has_primary_output range MoleculeAssociation Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:MoleculeAssociation native gocam:MoleculeAssociation LinkML Source Direct name: MoleculeAssociation description: An association between an activity and a molecule term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: MoleculeTermObject Induced name: MoleculeAssociation description: An association between an activity and a molecule term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: MoleculeTermObject attributes: term: name: term description: The ontology term that describes the nature of the association from_schema: https://w3id.org/gocam alias: term owner: MoleculeAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: MoleculeTermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: MoleculeAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: MoleculeAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: MoleculeAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Class: MoleculeAssociation"},{"location":"MoleculeAssociation/#class-moleculeassociation","text":"An association between an activity and a molecule term URI: gocam:MoleculeAssociation classDiagram class MoleculeAssociation click MoleculeAssociation href \"../MoleculeAssociation\" TermAssociation <|-- MoleculeAssociation click TermAssociation href \"../TermAssociation\" MoleculeAssociation : evidence MoleculeAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" MoleculeAssociation : provenances MoleculeAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" MoleculeAssociation : term MoleculeAssociation --> \"0..1\" MoleculeTermObject : term click MoleculeTermObject href \"../MoleculeTermObject\" MoleculeAssociation : type","title":"Class: MoleculeAssociation"},{"location":"MoleculeAssociation/#inheritance","text":"Association TermAssociation MoleculeAssociation","title":"Inheritance"},{"location":"MoleculeAssociation/#slots","text":"Name Cardinality and Range Description Inheritance term 0..1 MoleculeTermObject The ontology term that describes the nature of the association TermAssociation type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association","title":"Slots"},{"location":"MoleculeAssociation/#usages","text":"used by used in type used Activity has_input range MoleculeAssociation Activity has_primary_input range MoleculeAssociation Activity has_output range MoleculeAssociation Activity has_primary_output range MoleculeAssociation","title":"Usages"},{"location":"MoleculeAssociation/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"MoleculeAssociation/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"MoleculeAssociation/#mappings","text":"Mapping Type Mapped Value self gocam:MoleculeAssociation native gocam:MoleculeAssociation","title":"Mappings"},{"location":"MoleculeAssociation/#linkml-source","text":"","title":"LinkML Source"},{"location":"MoleculeAssociation/#direct","text":"name: MoleculeAssociation description: An association between an activity and a molecule term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: MoleculeTermObject","title":"Direct"},{"location":"MoleculeAssociation/#induced","text":"name: MoleculeAssociation description: An association between an activity and a molecule term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: MoleculeTermObject attributes: term: name: term description: The ontology term that describes the nature of the association from_schema: https://w3id.org/gocam alias: term owner: MoleculeAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: MoleculeTermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: MoleculeAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: MoleculeAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: MoleculeAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Induced"},{"location":"MoleculeTermObject/","text":"Class: MoleculeTermObject A term object that represents a molecule term from CHEBI or UniProtKB URI: gocam:MoleculeTermObject classDiagram class MoleculeTermObject click MoleculeTermObject href \"../MoleculeTermObject\" TermObject <|-- MoleculeTermObject click TermObject href \"../TermObject\" MoleculeTermObject : id MoleculeTermObject : label MoleculeTermObject : obsolete MoleculeTermObject : type Inheritance Object TermObject MoleculeTermObject Slots Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object Usages used by used in type used MoleculeAssociation term range MoleculeTermObject Identifier and Mapping Information Valid ID Prefixes Instances of this class should have identifiers with one of the following prefixes: CHEBI UniProtKB Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:MoleculeTermObject native gocam:MoleculeTermObject LinkML Source Direct name: MoleculeTermObject id_prefixes: - CHEBI - UniProtKB description: A term object that represents a molecule term from CHEBI or UniProtKB from_schema: https://w3id.org/gocam is_a: TermObject Induced name: MoleculeTermObject id_prefixes: - CHEBI - UniProtKB description: A term object that represents a molecule term from CHEBI or UniProtKB from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: MoleculeTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: MoleculeTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: MoleculeTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: MoleculeTermObject domain_of: - Object range: boolean","title":"Class: MoleculeTermObject"},{"location":"MoleculeTermObject/#class-moleculetermobject","text":"A term object that represents a molecule term from CHEBI or UniProtKB URI: gocam:MoleculeTermObject classDiagram class MoleculeTermObject click MoleculeTermObject href \"../MoleculeTermObject\" TermObject <|-- MoleculeTermObject click TermObject href \"../TermObject\" MoleculeTermObject : id MoleculeTermObject : label MoleculeTermObject : obsolete MoleculeTermObject : type","title":"Class: MoleculeTermObject"},{"location":"MoleculeTermObject/#inheritance","text":"Object TermObject MoleculeTermObject","title":"Inheritance"},{"location":"MoleculeTermObject/#slots","text":"Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object","title":"Slots"},{"location":"MoleculeTermObject/#usages","text":"used by used in type used MoleculeAssociation term range MoleculeTermObject","title":"Usages"},{"location":"MoleculeTermObject/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"MoleculeTermObject/#valid-id-prefixes","text":"Instances of this class should have identifiers with one of the following prefixes: CHEBI UniProtKB","title":"Valid ID Prefixes"},{"location":"MoleculeTermObject/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"MoleculeTermObject/#mappings","text":"Mapping Type Mapped Value self gocam:MoleculeTermObject native gocam:MoleculeTermObject","title":"Mappings"},{"location":"MoleculeTermObject/#linkml-source","text":"","title":"LinkML Source"},{"location":"MoleculeTermObject/#direct","text":"name: MoleculeTermObject id_prefixes: - CHEBI - UniProtKB description: A term object that represents a molecule term from CHEBI or UniProtKB from_schema: https://w3id.org/gocam is_a: TermObject","title":"Direct"},{"location":"MoleculeTermObject/#induced","text":"name: MoleculeTermObject id_prefixes: - CHEBI - UniProtKB description: A term object that represents a molecule term from CHEBI or UniProtKB from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: MoleculeTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: MoleculeTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: MoleculeTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: MoleculeTermObject domain_of: - Object range: boolean","title":"Induced"},{"location":"Ncname/","text":"Type: Ncname Prefix part of CURIE URI: xsd:string base : NCName uri : xsd:string repr : str Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam","title":"Type: Ncname"},{"location":"Ncname/#type-ncname","text":"Prefix part of CURIE URI: xsd:string base : NCName uri : xsd:string repr : str","title":"Type: Ncname"},{"location":"Ncname/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Ncname/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"Nodeidentifier/","text":"Type: Nodeidentifier A URI, CURIE or BNODE that represents a node in a model. URI: shex:nonLiteral base : NodeIdentifier uri : shex:nonLiteral repr : str Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam","title":"Type: Nodeidentifier"},{"location":"Nodeidentifier/#type-nodeidentifier","text":"A URI, CURIE or BNODE that represents a node in a model. URI: shex:nonLiteral base : NodeIdentifier uri : shex:nonLiteral repr : str","title":"Type: Nodeidentifier"},{"location":"Nodeidentifier/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Nodeidentifier/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"Object/","text":"Class: Object An abstract class for all identified objects in a model URI: gocam:Object classDiagram class Object click Object href \"../Object\" Object <|-- TermObject click TermObject href \"../TermObject\" Object <|-- PublicationObject click PublicationObject href \"../PublicationObject\" Object : id Object : label Object : obsolete Object : type Inheritance Object TermObject PublicationObject Slots Name Cardinality and Range Description Inheritance id 1 Uriorcurie direct label 0..1 String direct type 0..1 Uriorcurie direct obsolete 0..1 Boolean direct Usages used by used in type used Model objects range Object EvidenceItem with_objects range Object Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:Object native gocam:Object LinkML Source Direct name: Object description: An abstract class for all identified objects in a model from_schema: https://w3id.org/gocam attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label domain_of: - Object type: name: type from_schema: https://w3id.org/gocam designates_type: true domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 domain_of: - Object range: boolean Induced name: Object description: An abstract class for all identified objects in a model from_schema: https://w3id.org/gocam attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: Object domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: Object domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: Object domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: Object domain_of: - Object range: boolean","title":"Class: Object"},{"location":"Object/#class-object","text":"An abstract class for all identified objects in a model URI: gocam:Object classDiagram class Object click Object href \"../Object\" Object <|-- TermObject click TermObject href \"../TermObject\" Object <|-- PublicationObject click PublicationObject href \"../PublicationObject\" Object : id Object : label Object : obsolete Object : type","title":"Class: Object"},{"location":"Object/#inheritance","text":"Object TermObject PublicationObject","title":"Inheritance"},{"location":"Object/#slots","text":"Name Cardinality and Range Description Inheritance id 1 Uriorcurie direct label 0..1 String direct type 0..1 Uriorcurie direct obsolete 0..1 Boolean direct","title":"Slots"},{"location":"Object/#usages","text":"used by used in type used Model objects range Object EvidenceItem with_objects range Object","title":"Usages"},{"location":"Object/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Object/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"Object/#mappings","text":"Mapping Type Mapped Value self gocam:Object native gocam:Object","title":"Mappings"},{"location":"Object/#linkml-source","text":"","title":"LinkML Source"},{"location":"Object/#direct","text":"name: Object description: An abstract class for all identified objects in a model from_schema: https://w3id.org/gocam attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label domain_of: - Object type: name: type from_schema: https://w3id.org/gocam designates_type: true domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 domain_of: - Object range: boolean","title":"Direct"},{"location":"Object/#induced","text":"name: Object description: An abstract class for all identified objects in a model from_schema: https://w3id.org/gocam attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: Object domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: Object domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: Object domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: Object domain_of: - Object range: boolean","title":"Induced"},{"location":"Objectidentifier/","text":"Type: Objectidentifier A URI or CURIE that represents an object in the model. URI: shex:iri base : ElementIdentifier uri : shex:iri repr : str Comments Used for inheritance and type checking Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam","title":"Type: Objectidentifier"},{"location":"Objectidentifier/#type-objectidentifier","text":"A URI or CURIE that represents an object in the model. URI: shex:iri base : ElementIdentifier uri : shex:iri repr : str","title":"Type: Objectidentifier"},{"location":"Objectidentifier/#comments","text":"Used for inheritance and type checking","title":"Comments"},{"location":"Objectidentifier/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Objectidentifier/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"PhaseTermObject/","text":"Class: PhaseTermObject A term object that represents a phase term from GO or UBERON URI: gocam:PhaseTermObject classDiagram class PhaseTermObject click PhaseTermObject href \"../PhaseTermObject\" TermObject <|-- PhaseTermObject click TermObject href \"../TermObject\" PhaseTermObject : id PhaseTermObject : label PhaseTermObject : obsolete PhaseTermObject : type Inheritance Object TermObject PhaseTermObject Slots Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object Identifier and Mapping Information Valid ID Prefixes Instances of this class should have identifiers with one of the following prefixes: GO UBERON PO Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:PhaseTermObject native gocam:PhaseTermObject LinkML Source Direct name: PhaseTermObject id_prefixes: - GO - UBERON - PO description: A term object that represents a phase term from GO or UBERON from_schema: https://w3id.org/gocam is_a: TermObject Induced name: PhaseTermObject id_prefixes: - GO - UBERON - PO description: A term object that represents a phase term from GO or UBERON from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: PhaseTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: PhaseTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: PhaseTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: PhaseTermObject domain_of: - Object range: boolean","title":"Class: PhaseTermObject"},{"location":"PhaseTermObject/#class-phasetermobject","text":"A term object that represents a phase term from GO or UBERON URI: gocam:PhaseTermObject classDiagram class PhaseTermObject click PhaseTermObject href \"../PhaseTermObject\" TermObject <|-- PhaseTermObject click TermObject href \"../TermObject\" PhaseTermObject : id PhaseTermObject : label PhaseTermObject : obsolete PhaseTermObject : type","title":"Class: PhaseTermObject"},{"location":"PhaseTermObject/#inheritance","text":"Object TermObject PhaseTermObject","title":"Inheritance"},{"location":"PhaseTermObject/#slots","text":"Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object","title":"Slots"},{"location":"PhaseTermObject/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"PhaseTermObject/#valid-id-prefixes","text":"Instances of this class should have identifiers with one of the following prefixes: GO UBERON PO","title":"Valid ID Prefixes"},{"location":"PhaseTermObject/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"PhaseTermObject/#mappings","text":"Mapping Type Mapped Value self gocam:PhaseTermObject native gocam:PhaseTermObject","title":"Mappings"},{"location":"PhaseTermObject/#linkml-source","text":"","title":"LinkML Source"},{"location":"PhaseTermObject/#direct","text":"name: PhaseTermObject id_prefixes: - GO - UBERON - PO description: A term object that represents a phase term from GO or UBERON from_schema: https://w3id.org/gocam is_a: TermObject","title":"Direct"},{"location":"PhaseTermObject/#induced","text":"name: PhaseTermObject id_prefixes: - GO - UBERON - PO description: A term object that represents a phase term from GO or UBERON from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: PhaseTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: PhaseTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: PhaseTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: PhaseTermObject domain_of: - Object range: boolean","title":"Induced"},{"location":"PredicateTermObject/","text":"Class: PredicateTermObject A term object that represents a taxon term from NCBITaxon URI: gocam:PredicateTermObject classDiagram class PredicateTermObject click PredicateTermObject href \"../PredicateTermObject\" TermObject <|-- PredicateTermObject click TermObject href \"../TermObject\" PredicateTermObject : id PredicateTermObject : label PredicateTermObject : obsolete PredicateTermObject : type Inheritance Object TermObject PredicateTermObject Slots Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object Usages used by used in type used CausalAssociation predicate range PredicateTermObject Identifier and Mapping Information Valid ID Prefixes Instances of this class should have identifiers with one of the following prefixes: RO Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:PredicateTermObject native gocam:PredicateTermObject LinkML Source Direct name: PredicateTermObject id_prefixes: - RO description: A term object that represents a taxon term from NCBITaxon from_schema: https://w3id.org/gocam is_a: TermObject Induced name: PredicateTermObject id_prefixes: - RO description: A term object that represents a taxon term from NCBITaxon from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: PredicateTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: PredicateTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: PredicateTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: PredicateTermObject domain_of: - Object range: boolean","title":"Class: PredicateTermObject"},{"location":"PredicateTermObject/#class-predicatetermobject","text":"A term object that represents a taxon term from NCBITaxon URI: gocam:PredicateTermObject classDiagram class PredicateTermObject click PredicateTermObject href \"../PredicateTermObject\" TermObject <|-- PredicateTermObject click TermObject href \"../TermObject\" PredicateTermObject : id PredicateTermObject : label PredicateTermObject : obsolete PredicateTermObject : type","title":"Class: PredicateTermObject"},{"location":"PredicateTermObject/#inheritance","text":"Object TermObject PredicateTermObject","title":"Inheritance"},{"location":"PredicateTermObject/#slots","text":"Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object","title":"Slots"},{"location":"PredicateTermObject/#usages","text":"used by used in type used CausalAssociation predicate range PredicateTermObject","title":"Usages"},{"location":"PredicateTermObject/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"PredicateTermObject/#valid-id-prefixes","text":"Instances of this class should have identifiers with one of the following prefixes: RO","title":"Valid ID Prefixes"},{"location":"PredicateTermObject/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"PredicateTermObject/#mappings","text":"Mapping Type Mapped Value self gocam:PredicateTermObject native gocam:PredicateTermObject","title":"Mappings"},{"location":"PredicateTermObject/#linkml-source","text":"","title":"LinkML Source"},{"location":"PredicateTermObject/#direct","text":"name: PredicateTermObject id_prefixes: - RO description: A term object that represents a taxon term from NCBITaxon from_schema: https://w3id.org/gocam is_a: TermObject","title":"Direct"},{"location":"PredicateTermObject/#induced","text":"name: PredicateTermObject id_prefixes: - RO description: A term object that represents a taxon term from NCBITaxon from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: PredicateTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: PredicateTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: PredicateTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: PredicateTermObject domain_of: - Object range: boolean","title":"Induced"},{"location":"ProteinComplexTermObject/","text":"Class: ProteinComplexTermObject A term object that represents a protein complex term from GO URI: gocam:ProteinComplexTermObject classDiagram class ProteinComplexTermObject click ProteinComplexTermObject href \"../ProteinComplexTermObject\" InformationBiomacromoleculeTermObject <|-- ProteinComplexTermObject click InformationBiomacromoleculeTermObject href \"../InformationBiomacromoleculeTermObject\" ProteinComplexTermObject : id ProteinComplexTermObject : label ProteinComplexTermObject : obsolete ProteinComplexTermObject : type Inheritance Object TermObject InformationBiomacromoleculeTermObject ProteinComplexTermObject Slots Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object Usages used by used in type used EnabledByProteinComplexAssociation term range ProteinComplexTermObject Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:ProteinComplexTermObject native gocam:ProteinComplexTermObject LinkML Source Direct name: ProteinComplexTermObject description: A term object that represents a protein complex term from GO from_schema: https://w3id.org/gocam is_a: InformationBiomacromoleculeTermObject Induced name: ProteinComplexTermObject description: A term object that represents a protein complex term from GO from_schema: https://w3id.org/gocam is_a: InformationBiomacromoleculeTermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: ProteinComplexTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: ProteinComplexTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: ProteinComplexTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: ProteinComplexTermObject domain_of: - Object range: boolean","title":"Class: ProteinComplexTermObject"},{"location":"ProteinComplexTermObject/#class-proteincomplextermobject","text":"A term object that represents a protein complex term from GO URI: gocam:ProteinComplexTermObject classDiagram class ProteinComplexTermObject click ProteinComplexTermObject href \"../ProteinComplexTermObject\" InformationBiomacromoleculeTermObject <|-- ProteinComplexTermObject click InformationBiomacromoleculeTermObject href \"../InformationBiomacromoleculeTermObject\" ProteinComplexTermObject : id ProteinComplexTermObject : label ProteinComplexTermObject : obsolete ProteinComplexTermObject : type","title":"Class: ProteinComplexTermObject"},{"location":"ProteinComplexTermObject/#inheritance","text":"Object TermObject InformationBiomacromoleculeTermObject ProteinComplexTermObject","title":"Inheritance"},{"location":"ProteinComplexTermObject/#slots","text":"Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object","title":"Slots"},{"location":"ProteinComplexTermObject/#usages","text":"used by used in type used EnabledByProteinComplexAssociation term range ProteinComplexTermObject","title":"Usages"},{"location":"ProteinComplexTermObject/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"ProteinComplexTermObject/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"ProteinComplexTermObject/#mappings","text":"Mapping Type Mapped Value self gocam:ProteinComplexTermObject native gocam:ProteinComplexTermObject","title":"Mappings"},{"location":"ProteinComplexTermObject/#linkml-source","text":"","title":"LinkML Source"},{"location":"ProteinComplexTermObject/#direct","text":"name: ProteinComplexTermObject description: A term object that represents a protein complex term from GO from_schema: https://w3id.org/gocam is_a: InformationBiomacromoleculeTermObject","title":"Direct"},{"location":"ProteinComplexTermObject/#induced","text":"name: ProteinComplexTermObject description: A term object that represents a protein complex term from GO from_schema: https://w3id.org/gocam is_a: InformationBiomacromoleculeTermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: ProteinComplexTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: ProteinComplexTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: ProteinComplexTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: ProteinComplexTermObject domain_of: - Object range: boolean","title":"Induced"},{"location":"ProvenanceInfo/","text":"Class: ProvenanceInfo Provenance information for an object URI: gocam:ProvenanceInfo classDiagram class ProvenanceInfo click ProvenanceInfo href \"../ProvenanceInfo\" ProvenanceInfo : contributor ProvenanceInfo : created ProvenanceInfo : date ProvenanceInfo : provided_by Slots Name Cardinality and Range Description Inheritance contributor 0..1 String direct created 0..1 String direct date 0..1 String direct provided_by 0..1 String direct Usages used by used in type used Model provenances range ProvenanceInfo Activity provenances range ProvenanceInfo EvidenceItem provenances range ProvenanceInfo Association provenances range ProvenanceInfo EnabledByAssociation provenances range ProvenanceInfo EnabledByGeneProductAssociation provenances range ProvenanceInfo EnabledByProteinComplexAssociation provenances range ProvenanceInfo CausalAssociation provenances range ProvenanceInfo TermAssociation provenances range ProvenanceInfo MolecularFunctionAssociation provenances range ProvenanceInfo BiologicalProcessAssociation provenances range ProvenanceInfo CellularAnatomicalEntityAssociation provenances range ProvenanceInfo CellTypeAssociation provenances range ProvenanceInfo GrossAnatomyAssociation provenances range ProvenanceInfo MoleculeAssociation provenances range ProvenanceInfo Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:ProvenanceInfo native gocam:ProvenanceInfo LinkML Source Direct name: ProvenanceInfo description: Provenance information for an object from_schema: https://w3id.org/gocam attributes: contributor: name: contributor from_schema: https://w3id.org/gocam rank: 1000 slot_uri: dct:contributor domain_of: - ProvenanceInfo created: name: created from_schema: https://w3id.org/gocam rank: 1000 slot_uri: dct:created domain_of: - ProvenanceInfo date: name: date from_schema: https://w3id.org/gocam rank: 1000 slot_uri: dct:date domain_of: - ProvenanceInfo provided_by: name: provided_by from_schema: https://w3id.org/gocam rank: 1000 slot_uri: pav:providedBy domain_of: - ProvenanceInfo Induced name: ProvenanceInfo description: Provenance information for an object from_schema: https://w3id.org/gocam attributes: contributor: name: contributor from_schema: https://w3id.org/gocam rank: 1000 slot_uri: dct:contributor alias: contributor owner: ProvenanceInfo domain_of: - ProvenanceInfo range: string created: name: created from_schema: https://w3id.org/gocam rank: 1000 slot_uri: dct:created alias: created owner: ProvenanceInfo domain_of: - ProvenanceInfo range: string date: name: date from_schema: https://w3id.org/gocam rank: 1000 slot_uri: dct:date alias: date owner: ProvenanceInfo domain_of: - ProvenanceInfo range: string provided_by: name: provided_by from_schema: https://w3id.org/gocam rank: 1000 slot_uri: pav:providedBy alias: provided_by owner: ProvenanceInfo domain_of: - ProvenanceInfo range: string","title":"Class: ProvenanceInfo"},{"location":"ProvenanceInfo/#class-provenanceinfo","text":"Provenance information for an object URI: gocam:ProvenanceInfo classDiagram class ProvenanceInfo click ProvenanceInfo href \"../ProvenanceInfo\" ProvenanceInfo : contributor ProvenanceInfo : created ProvenanceInfo : date ProvenanceInfo : provided_by","title":"Class: ProvenanceInfo"},{"location":"ProvenanceInfo/#slots","text":"Name Cardinality and Range Description Inheritance contributor 0..1 String direct created 0..1 String direct date 0..1 String direct provided_by 0..1 String direct","title":"Slots"},{"location":"ProvenanceInfo/#usages","text":"used by used in type used Model provenances range ProvenanceInfo Activity provenances range ProvenanceInfo EvidenceItem provenances range ProvenanceInfo Association provenances range ProvenanceInfo EnabledByAssociation provenances range ProvenanceInfo EnabledByGeneProductAssociation provenances range ProvenanceInfo EnabledByProteinComplexAssociation provenances range ProvenanceInfo CausalAssociation provenances range ProvenanceInfo TermAssociation provenances range ProvenanceInfo MolecularFunctionAssociation provenances range ProvenanceInfo BiologicalProcessAssociation provenances range ProvenanceInfo CellularAnatomicalEntityAssociation provenances range ProvenanceInfo CellTypeAssociation provenances range ProvenanceInfo GrossAnatomyAssociation provenances range ProvenanceInfo MoleculeAssociation provenances range ProvenanceInfo","title":"Usages"},{"location":"ProvenanceInfo/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"ProvenanceInfo/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"ProvenanceInfo/#mappings","text":"Mapping Type Mapped Value self gocam:ProvenanceInfo native gocam:ProvenanceInfo","title":"Mappings"},{"location":"ProvenanceInfo/#linkml-source","text":"","title":"LinkML Source"},{"location":"ProvenanceInfo/#direct","text":"name: ProvenanceInfo description: Provenance information for an object from_schema: https://w3id.org/gocam attributes: contributor: name: contributor from_schema: https://w3id.org/gocam rank: 1000 slot_uri: dct:contributor domain_of: - ProvenanceInfo created: name: created from_schema: https://w3id.org/gocam rank: 1000 slot_uri: dct:created domain_of: - ProvenanceInfo date: name: date from_schema: https://w3id.org/gocam rank: 1000 slot_uri: dct:date domain_of: - ProvenanceInfo provided_by: name: provided_by from_schema: https://w3id.org/gocam rank: 1000 slot_uri: pav:providedBy domain_of: - ProvenanceInfo","title":"Direct"},{"location":"ProvenanceInfo/#induced","text":"name: ProvenanceInfo description: Provenance information for an object from_schema: https://w3id.org/gocam attributes: contributor: name: contributor from_schema: https://w3id.org/gocam rank: 1000 slot_uri: dct:contributor alias: contributor owner: ProvenanceInfo domain_of: - ProvenanceInfo range: string created: name: created from_schema: https://w3id.org/gocam rank: 1000 slot_uri: dct:created alias: created owner: ProvenanceInfo domain_of: - ProvenanceInfo range: string date: name: date from_schema: https://w3id.org/gocam rank: 1000 slot_uri: dct:date alias: date owner: ProvenanceInfo domain_of: - ProvenanceInfo range: string provided_by: name: provided_by from_schema: https://w3id.org/gocam rank: 1000 slot_uri: pav:providedBy alias: provided_by owner: ProvenanceInfo domain_of: - ProvenanceInfo range: string","title":"Induced"},{"location":"PublicationObject/","text":"Class: PublicationObject An object that represents a publication or other kind of reference URI: gocam:PublicationObject classDiagram class PublicationObject click PublicationObject href \"../PublicationObject\" Object <|-- PublicationObject click Object href \"../Object\" PublicationObject : abstract_text PublicationObject : full_text PublicationObject : id PublicationObject : label PublicationObject : obsolete PublicationObject : type Inheritance Object PublicationObject Slots Name Cardinality and Range Description Inheritance abstract_text 0..1 String direct full_text 0..1 String direct id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object Usages used by used in type used EvidenceItem reference range PublicationObject Identifier and Mapping Information Valid ID Prefixes Instances of this class should have identifiers with one of the following prefixes: PMID GOREF DOI Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:PublicationObject native gocam:PublicationObject LinkML Source Direct name: PublicationObject id_prefixes: - PMID - GOREF - DOI description: An object that represents a publication or other kind of reference from_schema: https://w3id.org/gocam is_a: Object attributes: abstract_text: name: abstract_text from_schema: https://w3id.org/gocam rank: 1000 domain_of: - PublicationObject full_text: name: full_text from_schema: https://w3id.org/gocam rank: 1000 domain_of: - PublicationObject Induced name: PublicationObject id_prefixes: - PMID - GOREF - DOI description: An object that represents a publication or other kind of reference from_schema: https://w3id.org/gocam is_a: Object attributes: abstract_text: name: abstract_text from_schema: https://w3id.org/gocam rank: 1000 alias: abstract_text owner: PublicationObject domain_of: - PublicationObject range: string full_text: name: full_text from_schema: https://w3id.org/gocam rank: 1000 alias: full_text owner: PublicationObject domain_of: - PublicationObject range: string id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: PublicationObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: PublicationObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: PublicationObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: PublicationObject domain_of: - Object range: boolean","title":"Class: PublicationObject"},{"location":"PublicationObject/#class-publicationobject","text":"An object that represents a publication or other kind of reference URI: gocam:PublicationObject classDiagram class PublicationObject click PublicationObject href \"../PublicationObject\" Object <|-- PublicationObject click Object href \"../Object\" PublicationObject : abstract_text PublicationObject : full_text PublicationObject : id PublicationObject : label PublicationObject : obsolete PublicationObject : type","title":"Class: PublicationObject"},{"location":"PublicationObject/#inheritance","text":"Object PublicationObject","title":"Inheritance"},{"location":"PublicationObject/#slots","text":"Name Cardinality and Range Description Inheritance abstract_text 0..1 String direct full_text 0..1 String direct id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object","title":"Slots"},{"location":"PublicationObject/#usages","text":"used by used in type used EvidenceItem reference range PublicationObject","title":"Usages"},{"location":"PublicationObject/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"PublicationObject/#valid-id-prefixes","text":"Instances of this class should have identifiers with one of the following prefixes: PMID GOREF DOI","title":"Valid ID Prefixes"},{"location":"PublicationObject/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"PublicationObject/#mappings","text":"Mapping Type Mapped Value self gocam:PublicationObject native gocam:PublicationObject","title":"Mappings"},{"location":"PublicationObject/#linkml-source","text":"","title":"LinkML Source"},{"location":"PublicationObject/#direct","text":"name: PublicationObject id_prefixes: - PMID - GOREF - DOI description: An object that represents a publication or other kind of reference from_schema: https://w3id.org/gocam is_a: Object attributes: abstract_text: name: abstract_text from_schema: https://w3id.org/gocam rank: 1000 domain_of: - PublicationObject full_text: name: full_text from_schema: https://w3id.org/gocam rank: 1000 domain_of: - PublicationObject","title":"Direct"},{"location":"PublicationObject/#induced","text":"name: PublicationObject id_prefixes: - PMID - GOREF - DOI description: An object that represents a publication or other kind of reference from_schema: https://w3id.org/gocam is_a: Object attributes: abstract_text: name: abstract_text from_schema: https://w3id.org/gocam rank: 1000 alias: abstract_text owner: PublicationObject domain_of: - PublicationObject range: string full_text: name: full_text from_schema: https://w3id.org/gocam rank: 1000 alias: full_text owner: PublicationObject domain_of: - PublicationObject range: string id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: PublicationObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: PublicationObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: PublicationObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: PublicationObject domain_of: - Object range: boolean","title":"Induced"},{"location":"Sparqlpath/","text":"Type: Sparqlpath A string encoding a SPARQL Property Path. The value of the string MUST conform to SPARQL syntax and SHOULD dereference to zero or more valid objects within the current instance document when encoded as RDF. URI: xsd:string base : str uri : xsd:string repr : str Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam","title":"Type: Sparqlpath"},{"location":"Sparqlpath/#type-sparqlpath","text":"A string encoding a SPARQL Property Path. The value of the string MUST conform to SPARQL syntax and SHOULD dereference to zero or more valid objects within the current instance document when encoded as RDF. URI: xsd:string base : str uri : xsd:string repr : str","title":"Type: Sparqlpath"},{"location":"Sparqlpath/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Sparqlpath/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"String/","text":"Type: String A character string URI: xsd:string base : str uri : xsd:string Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam","title":"Type: String"},{"location":"String/#type-string","text":"A character string URI: xsd:string base : str uri : xsd:string","title":"Type: String"},{"location":"String/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"String/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"TaxonTermObject/","text":"Class: TaxonTermObject A term object that represents a taxon term from NCBITaxon URI: gocam:TaxonTermObject classDiagram class TaxonTermObject click TaxonTermObject href \"../TaxonTermObject\" TermObject <|-- TaxonTermObject click TermObject href \"../TermObject\" TaxonTermObject : id TaxonTermObject : label TaxonTermObject : obsolete TaxonTermObject : type Inheritance Object TermObject TaxonTermObject Slots Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object Usages used by used in type used Model taxon range TaxonTermObject Identifier and Mapping Information Valid ID Prefixes Instances of this class should have identifiers with one of the following prefixes: NCBITaxon Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:TaxonTermObject native gocam:TaxonTermObject LinkML Source Direct name: TaxonTermObject id_prefixes: - NCBITaxon description: A term object that represents a taxon term from NCBITaxon from_schema: https://w3id.org/gocam is_a: TermObject Induced name: TaxonTermObject id_prefixes: - NCBITaxon description: A term object that represents a taxon term from NCBITaxon from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: TaxonTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: TaxonTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: TaxonTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: TaxonTermObject domain_of: - Object range: boolean","title":"Class: TaxonTermObject"},{"location":"TaxonTermObject/#class-taxontermobject","text":"A term object that represents a taxon term from NCBITaxon URI: gocam:TaxonTermObject classDiagram class TaxonTermObject click TaxonTermObject href \"../TaxonTermObject\" TermObject <|-- TaxonTermObject click TermObject href \"../TermObject\" TaxonTermObject : id TaxonTermObject : label TaxonTermObject : obsolete TaxonTermObject : type","title":"Class: TaxonTermObject"},{"location":"TaxonTermObject/#inheritance","text":"Object TermObject TaxonTermObject","title":"Inheritance"},{"location":"TaxonTermObject/#slots","text":"Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object","title":"Slots"},{"location":"TaxonTermObject/#usages","text":"used by used in type used Model taxon range TaxonTermObject","title":"Usages"},{"location":"TaxonTermObject/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"TaxonTermObject/#valid-id-prefixes","text":"Instances of this class should have identifiers with one of the following prefixes: NCBITaxon","title":"Valid ID Prefixes"},{"location":"TaxonTermObject/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"TaxonTermObject/#mappings","text":"Mapping Type Mapped Value self gocam:TaxonTermObject native gocam:TaxonTermObject","title":"Mappings"},{"location":"TaxonTermObject/#linkml-source","text":"","title":"LinkML Source"},{"location":"TaxonTermObject/#direct","text":"name: TaxonTermObject id_prefixes: - NCBITaxon description: A term object that represents a taxon term from NCBITaxon from_schema: https://w3id.org/gocam is_a: TermObject","title":"Direct"},{"location":"TaxonTermObject/#induced","text":"name: TaxonTermObject id_prefixes: - NCBITaxon description: A term object that represents a taxon term from NCBITaxon from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: TaxonTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: TaxonTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: TaxonTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: TaxonTermObject domain_of: - Object range: boolean","title":"Induced"},{"location":"TermAssociation/","text":"Class: TermAssociation An association between an activity and a term, potentially with extensions NOTE : this is an abstract class and should not be instantiated directly URI: gocam:TermAssociation classDiagram class TermAssociation click TermAssociation href \"../TermAssociation\" Association <|-- TermAssociation click Association href \"../Association\" TermAssociation <|-- MolecularFunctionAssociation click MolecularFunctionAssociation href \"../MolecularFunctionAssociation\" TermAssociation <|-- BiologicalProcessAssociation click BiologicalProcessAssociation href \"../BiologicalProcessAssociation\" TermAssociation <|-- CellularAnatomicalEntityAssociation click CellularAnatomicalEntityAssociation href \"../CellularAnatomicalEntityAssociation\" TermAssociation <|-- CellTypeAssociation click CellTypeAssociation href \"../CellTypeAssociation\" TermAssociation <|-- GrossAnatomyAssociation click GrossAnatomyAssociation href \"../GrossAnatomyAssociation\" TermAssociation <|-- MoleculeAssociation click MoleculeAssociation href \"../MoleculeAssociation\" TermAssociation : evidence TermAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" TermAssociation : provenances TermAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" TermAssociation : term TermAssociation --> \"0..1\" TermObject : term click TermObject href \"../TermObject\" TermAssociation : type Inheritance Association TermAssociation MolecularFunctionAssociation BiologicalProcessAssociation CellularAnatomicalEntityAssociation CellTypeAssociation GrossAnatomyAssociation MoleculeAssociation Slots Name Cardinality and Range Description Inheritance term 0..1 TermObject The ontology term that describes the nature of the association direct type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:TermAssociation native gocam:TermAssociation LinkML Source Direct name: TermAssociation description: An association between an activity and a term, potentially with extensions from_schema: https://w3id.org/gocam is_a: Association abstract: true attributes: term: name: term description: The ontology term that describes the nature of the association from_schema: https://w3id.org/gocam domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: TermObject Induced name: TermAssociation description: An association between an activity and a term, potentially with extensions from_schema: https://w3id.org/gocam is_a: Association abstract: true attributes: term: name: term description: The ontology term that describes the nature of the association from_schema: https://w3id.org/gocam alias: term owner: TermAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: TermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: TermAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: TermAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: TermAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Class: TermAssociation"},{"location":"TermAssociation/#class-termassociation","text":"An association between an activity and a term, potentially with extensions NOTE : this is an abstract class and should not be instantiated directly URI: gocam:TermAssociation classDiagram class TermAssociation click TermAssociation href \"../TermAssociation\" Association <|-- TermAssociation click Association href \"../Association\" TermAssociation <|-- MolecularFunctionAssociation click MolecularFunctionAssociation href \"../MolecularFunctionAssociation\" TermAssociation <|-- BiologicalProcessAssociation click BiologicalProcessAssociation href \"../BiologicalProcessAssociation\" TermAssociation <|-- CellularAnatomicalEntityAssociation click CellularAnatomicalEntityAssociation href \"../CellularAnatomicalEntityAssociation\" TermAssociation <|-- CellTypeAssociation click CellTypeAssociation href \"../CellTypeAssociation\" TermAssociation <|-- GrossAnatomyAssociation click GrossAnatomyAssociation href \"../GrossAnatomyAssociation\" TermAssociation <|-- MoleculeAssociation click MoleculeAssociation href \"../MoleculeAssociation\" TermAssociation : evidence TermAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" TermAssociation : provenances TermAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" TermAssociation : term TermAssociation --> \"0..1\" TermObject : term click TermObject href \"../TermObject\" TermAssociation : type","title":"Class: TermAssociation"},{"location":"TermAssociation/#inheritance","text":"Association TermAssociation MolecularFunctionAssociation BiologicalProcessAssociation CellularAnatomicalEntityAssociation CellTypeAssociation GrossAnatomyAssociation MoleculeAssociation","title":"Inheritance"},{"location":"TermAssociation/#slots","text":"Name Cardinality and Range Description Inheritance term 0..1 TermObject The ontology term that describes the nature of the association direct type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association","title":"Slots"},{"location":"TermAssociation/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"TermAssociation/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"TermAssociation/#mappings","text":"Mapping Type Mapped Value self gocam:TermAssociation native gocam:TermAssociation","title":"Mappings"},{"location":"TermAssociation/#linkml-source","text":"","title":"LinkML Source"},{"location":"TermAssociation/#direct","text":"name: TermAssociation description: An association between an activity and a term, potentially with extensions from_schema: https://w3id.org/gocam is_a: Association abstract: true attributes: term: name: term description: The ontology term that describes the nature of the association from_schema: https://w3id.org/gocam domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: TermObject","title":"Direct"},{"location":"TermAssociation/#induced","text":"name: TermAssociation description: An association between an activity and a term, potentially with extensions from_schema: https://w3id.org/gocam is_a: Association abstract: true attributes: term: name: term description: The ontology term that describes the nature of the association from_schema: https://w3id.org/gocam alias: term owner: TermAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: TermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: TermAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: TermAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: TermAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Induced"},{"location":"TermObject/","text":"Class: TermObject An abstract class for all ontology term objects NOTE : this is an abstract class and should not be instantiated directly URI: gocam:TermObject classDiagram class TermObject click TermObject href \"../TermObject\" Object <|-- TermObject click Object href \"../Object\" TermObject <|-- EvidenceTermObject click EvidenceTermObject href \"../EvidenceTermObject\" TermObject <|-- MolecularFunctionTermObject click MolecularFunctionTermObject href \"../MolecularFunctionTermObject\" TermObject <|-- BiologicalProcessTermObject click BiologicalProcessTermObject href \"../BiologicalProcessTermObject\" TermObject <|-- CellularAnatomicalEntityTermObject click CellularAnatomicalEntityTermObject href \"../CellularAnatomicalEntityTermObject\" TermObject <|-- MoleculeTermObject click MoleculeTermObject href \"../MoleculeTermObject\" TermObject <|-- CellTypeTermObject click CellTypeTermObject href \"../CellTypeTermObject\" TermObject <|-- GrossAnatomicalStructureTermObject click GrossAnatomicalStructureTermObject href \"../GrossAnatomicalStructureTermObject\" TermObject <|-- PhaseTermObject click PhaseTermObject href \"../PhaseTermObject\" TermObject <|-- InformationBiomacromoleculeTermObject click InformationBiomacromoleculeTermObject href \"../InformationBiomacromoleculeTermObject\" TermObject <|-- TaxonTermObject click TaxonTermObject href \"../TaxonTermObject\" TermObject <|-- PredicateTermObject click PredicateTermObject href \"../PredicateTermObject\" TermObject : id TermObject : label TermObject : obsolete TermObject : type Inheritance Object TermObject EvidenceTermObject MolecularFunctionTermObject BiologicalProcessTermObject CellularAnatomicalEntityTermObject MoleculeTermObject CellTypeTermObject GrossAnatomicalStructureTermObject PhaseTermObject InformationBiomacromoleculeTermObject TaxonTermObject PredicateTermObject Slots Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object Usages used by used in type used TermAssociation term range TermObject Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:TermObject native gocam:TermObject LinkML Source Direct name: TermObject description: An abstract class for all ontology term objects from_schema: https://w3id.org/gocam is_a: Object abstract: true Induced name: TermObject description: An abstract class for all ontology term objects from_schema: https://w3id.org/gocam is_a: Object abstract: true attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: TermObject domain_of: - 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Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: TermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: TermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: TermObject domain_of: - Object range: boolean","title":"Induced"},{"location":"Time/","text":"Type: Time A time object represents a (local) time of day, independent of any particular day URI: xsd:time base : XSDTime uri : xsd:time repr : str Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam","title":"Type: Time"},{"location":"Time/#type-time","text":"A time object represents a (local) time of day, independent of any particular day URI: xsd:time base : XSDTime uri : xsd:time repr : str","title":"Type: Time"},{"location":"Time/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Time/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"Uri/","text":"Type: Uri a complete URI URI: xsd:anyURI base : URI uri : xsd:anyURI repr : str Comments in RDF serializations a slot with range of uri is treated as a literal or type xsd:anyURI unless it is an identifier or a reference to an identifier, in which case it is translated directly to a node Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam","title":"Type: Uri"},{"location":"Uri/#type-uri","text":"a complete URI URI: xsd:anyURI base : URI uri : xsd:anyURI repr : str","title":"Type: Uri"},{"location":"Uri/#comments","text":"in RDF serializations a slot with range of uri is treated as a literal or type xsd:anyURI unless it is an identifier or a reference to an identifier, in which case it is translated directly to a node","title":"Comments"},{"location":"Uri/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Uri/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"Uriorcurie/","text":"Type: Uriorcurie a URI or a CURIE URI: xsd:anyURI base : URIorCURIE uri : xsd:anyURI repr : str Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam","title":"Type: Uriorcurie"},{"location":"Uriorcurie/#type-uriorcurie","text":"a URI or a CURIE URI: xsd:anyURI base : URIorCURIE uri : xsd:anyURI repr : str","title":"Type: Uriorcurie"},{"location":"Uriorcurie/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Uriorcurie/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"about/","text":"gocam GO CAM Data Model (Python)","title":"About"},{"location":"about/#gocam","text":"GO CAM Data Model (Python)","title":"gocam"},{"location":"abstract_text/","text":"Slot: abstract_text URI: gocam:abstract_text Applicable Classes Name Description Modifies Slot PublicationObject An object that represents a publication or other kind of reference no Properties Range: String Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam LinkML Source name: abstract_text from_schema: https://w3id.org/gocam rank: 1000 alias: abstract_text owner: PublicationObject domain_of: - PublicationObject range: string","title":"Slot: abstract_text"},{"location":"abstract_text/#slot-abstract_text","text":"URI: gocam:abstract_text","title":"Slot: abstract_text"},{"location":"abstract_text/#applicable-classes","text":"Name Description Modifies Slot PublicationObject An object that represents a publication or other kind of reference no","title":"Applicable Classes"},{"location":"abstract_text/#properties","text":"Range: String","title":"Properties"},{"location":"abstract_text/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"abstract_text/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"abstract_text/#linkml-source","text":"name: abstract_text from_schema: https://w3id.org/gocam rank: 1000 alias: abstract_text owner: PublicationObject domain_of: - PublicationObject range: string","title":"LinkML Source"},{"location":"activities/","text":"Slot: activities All of the activities that are part of the model URI: gocam:activities Applicable Classes Name Description Modifies Slot Model A model of a biological program consisting of a set of causally connected act... no Properties Range: Activity Multivalued: True Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam LinkML Source name: activities description: All of the activities that are part of the model from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: activities owner: Model domain_of: - 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Association range: EvidenceItem inlined: true","title":"LinkML Source"},{"location":"full_text/","text":"Slot: full_text URI: gocam:full_text Applicable Classes Name Description Modifies Slot PublicationObject An object that represents a publication or other kind of reference no Properties Range: String Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam LinkML Source name: full_text from_schema: https://w3id.org/gocam rank: 1000 alias: full_text owner: PublicationObject domain_of: - PublicationObject range: string","title":"Slot: full_text"},{"location":"full_text/#slot-full_text","text":"URI: gocam:full_text","title":"Slot: full_text"},{"location":"full_text/#applicable-classes","text":"Name Description Modifies Slot PublicationObject An object that represents a publication or other kind of reference no","title":"Applicable Classes"},{"location":"full_text/#properties","text":"Range: String","title":"Properties"},{"location":"full_text/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"full_text/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"full_text/#linkml-source","text":"name: full_text from_schema: https://w3id.org/gocam rank: 1000 alias: full_text owner: PublicationObject domain_of: - 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Activity range: MoleculeAssociation inlined: true inlined_as_list: true","title":"LinkML Source"},{"location":"has_output/","text":"Slot: has_output The output molecules that are directly produced by the activity URI: gocam:has_output Applicable Classes Name Description Modifies Slot Activity An individual activity in a causal model, representing the individual molecul... no Properties Range: MoleculeAssociation Multivalued: True Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam LinkML Source name: has_output description: The output molecules that are directly produced by the activity from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: has_output owner: Activity domain_of: - Activity range: MoleculeAssociation inlined: true inlined_as_list: true","title":"Slot: has_output"},{"location":"has_output/#slot-has_output","text":"The output molecules that are directly produced by the activity URI: gocam:has_output","title":"Slot: has_output"},{"location":"has_output/#applicable-classes","text":"Name Description Modifies Slot Activity An individual activity in a causal model, representing the individual molecul... no","title":"Applicable Classes"},{"location":"has_output/#properties","text":"Range: MoleculeAssociation Multivalued: True","title":"Properties"},{"location":"has_output/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"has_output/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"has_output/#linkml-source","text":"name: has_output description: The output molecules that are directly produced by the activity from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: has_output owner: Activity domain_of: - Activity range: MoleculeAssociation inlined: true inlined_as_list: true","title":"LinkML Source"},{"location":"has_primary_input/","text":"Slot: has_primary_input The primary input molecule that is directly consumed by the activity URI: gocam:has_primary_input Applicable Classes Name Description Modifies Slot Activity An individual activity in a causal model, representing the individual molecul... no Properties Range: MoleculeAssociation Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam LinkML Source name: has_primary_input description: The primary input molecule that is directly consumed by the activity from_schema: https://w3id.org/gocam rank: 1000 alias: has_primary_input owner: Activity domain_of: - Activity range: MoleculeAssociation inlined: true","title":"Slot: has_primary_input"},{"location":"has_primary_input/#slot-has_primary_input","text":"The primary input molecule that is directly consumed by the activity URI: gocam:has_primary_input","title":"Slot: has_primary_input"},{"location":"has_primary_input/#applicable-classes","text":"Name Description Modifies Slot Activity An individual activity in a causal model, representing the individual molecul... no","title":"Applicable Classes"},{"location":"has_primary_input/#properties","text":"Range: MoleculeAssociation","title":"Properties"},{"location":"has_primary_input/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"has_primary_input/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"has_primary_input/#linkml-source","text":"name: has_primary_input description: The primary input molecule that is directly consumed by the activity from_schema: https://w3id.org/gocam rank: 1000 alias: has_primary_input owner: Activity domain_of: - Activity range: MoleculeAssociation inlined: true","title":"LinkML Source"},{"location":"has_primary_output/","text":"Slot: has_primary_output The primary output molecule that is directly produced by the activity URI: gocam:has_primary_output Applicable Classes Name Description Modifies Slot Activity An individual activity in a causal model, representing the individual molecul... no Properties Range: MoleculeAssociation Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam LinkML Source name: has_primary_output description: The primary output molecule that is directly produced by the activity from_schema: https://w3id.org/gocam rank: 1000 alias: has_primary_output owner: Activity domain_of: - Activity range: MoleculeAssociation inlined: true","title":"Slot: has_primary_output"},{"location":"has_primary_output/#slot-has_primary_output","text":"The primary output molecule that is directly produced by the activity URI: gocam:has_primary_output","title":"Slot: has_primary_output"},{"location":"has_primary_output/#applicable-classes","text":"Name Description Modifies Slot Activity An individual activity in a causal model, representing the individual molecul... no","title":"Applicable Classes"},{"location":"has_primary_output/#properties","text":"Range: MoleculeAssociation","title":"Properties"},{"location":"has_primary_output/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"has_primary_output/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"has_primary_output/#linkml-source","text":"name: has_primary_output description: The primary output molecule that is directly produced by the activity from_schema: https://w3id.org/gocam rank: 1000 alias: has_primary_output owner: Activity domain_of: - Activity range: MoleculeAssociation inlined: true","title":"LinkML Source"},{"location":"id/","text":"Slot: id URI: gocam:id Applicable Classes Name Description Modifies Slot PublicationObject An object that represents a publication or other kind of reference no CellTypeTermObject A term object that represents a cell type term from CL no MolecularFunctionTermObject A term object that represents a molecular function term from GO no MoleculeTermObject A term object that represents a molecule term from CHEBI or UniProtKB no TaxonTermObject A term object that represents a taxon term from NCBITaxon no Object An abstract class for all identified objects in a model no BiologicalProcessTermObject A term object that represents a biological process term from GO no InformationBiomacromoleculeTermObject An abstract class for all information biomacromolecule term objects no GeneProductTermObject A term object that represents a gene product term from GO or UniProtKB no Model A model of a biological program consisting of a set of causally connected act... no PhaseTermObject A term object that represents a phase term from GO or UBERON no Activity An individual activity in a causal model, representing the individual molecul... no TermObject An abstract class for all ontology term objects no ProteinComplexTermObject A term object that represents a protein complex term from GO no GrossAnatomicalStructureTermObject A term object that represents a gross anatomical structure term from UBERON no PredicateTermObject A term object that represents a taxon term from NCBITaxon no EvidenceTermObject A term object that represents an evidence term from ECO no CellularAnatomicalEntityTermObject A term object that represents a cellular anatomical entity term from GO no Properties Range: String Identifier and Mapping Information LinkML Source name: id alias: id domain_of: - 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Object range: string","title":"Slot: label"},{"location":"label/#slot-label","text":"URI: rdfs:label","title":"Slot: label"},{"location":"label/#applicable-classes","text":"Name Description Modifies Slot PublicationObject An object that represents a publication or other kind of reference no CellTypeTermObject A term object that represents a cell type term from CL no MolecularFunctionTermObject A term object that represents a molecular function term from GO no MoleculeTermObject A term object that represents a molecule term from CHEBI or UniProtKB no TaxonTermObject A term object that represents a taxon term from NCBITaxon no Object An abstract class for all identified objects in a model no BiologicalProcessTermObject A term object that represents a biological process term from GO no InformationBiomacromoleculeTermObject An abstract class for all information biomacromolecule term objects no GeneProductTermObject A term object that represents a gene product term from GO or UniProtKB no PhaseTermObject A term object that represents a phase term from GO or UBERON no TermObject An abstract class for all ontology term objects no ProteinComplexTermObject A term object that represents a protein complex term from GO no GrossAnatomicalStructureTermObject A term object that represents a gross anatomical structure term from UBERON no PredicateTermObject A term object that represents a taxon term from NCBITaxon no EvidenceTermObject A term object that represents an evidence term from ECO no CellularAnatomicalEntityTermObject A term object that represents a cellular anatomical entity term from GO no","title":"Applicable Classes"},{"location":"label/#properties","text":"Range: String","title":"Properties"},{"location":"label/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"label/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"label/#linkml-source","text":"name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: Object domain_of: - Object range: string","title":"LinkML Source"},{"location":"members/","text":"Slot: members The gene products that are part of the complex URI: gocam:members Applicable Classes Name Description Modifies Slot EnabledByProteinComplexAssociation An association between an activity and a protein complex no Properties Range: GeneProductTermObject Multivalued: True Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam LinkML Source name: members description: The gene products that are part of the complex from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: members owner: EnabledByProteinComplexAssociation domain_of: - EnabledByProteinComplexAssociation range: GeneProductTermObject","title":"Slot: members"},{"location":"members/#slot-members","text":"The gene products that are part of the complex URI: gocam:members","title":"Slot: members"},{"location":"members/#applicable-classes","text":"Name Description Modifies Slot EnabledByProteinComplexAssociation An association between an activity and a protein complex no","title":"Applicable Classes"},{"location":"members/#properties","text":"Range: GeneProductTermObject Multivalued: True","title":"Properties"},{"location":"members/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"members/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"members/#linkml-source","text":"name: members description: The gene products that are part of the complex from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: members owner: EnabledByProteinComplexAssociation domain_of: - EnabledByProteinComplexAssociation range: GeneProductTermObject","title":"LinkML Source"},{"location":"molecular_function/","text":"Slot: molecular_function The molecular function that is carried out by the gene product or complex URI: gocam:molecular_function Applicable Classes Name Description Modifies Slot Activity An individual activity in a causal model, representing the individual molecul... no Properties Range: MolecularFunctionAssociation TODOs currently BP, CC etc are at the level of the activity, not the MolecularFunctionAssociation Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam LinkML Source name: molecular_function description: The molecular function that is carried out by the gene product or complex todos: - currently BP, CC etc are at the level of the activity, not the MolecularFunctionAssociation from_schema: https://w3id.org/gocam rank: 1000 alias: molecular_function owner: Activity domain_of: - Activity range: MolecularFunctionAssociation inlined: true","title":"Slot: molecular_function"},{"location":"molecular_function/#slot-molecular_function","text":"The molecular function that is carried out by the gene product or complex URI: gocam:molecular_function","title":"Slot: molecular_function"},{"location":"molecular_function/#applicable-classes","text":"Name Description Modifies Slot Activity An individual activity in a causal model, representing the individual molecul... no","title":"Applicable Classes"},{"location":"molecular_function/#properties","text":"Range: MolecularFunctionAssociation","title":"Properties"},{"location":"molecular_function/#todos","text":"currently BP, CC etc are at the level of the activity, not the MolecularFunctionAssociation","title":"TODOs"},{"location":"molecular_function/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"molecular_function/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"molecular_function/#linkml-source","text":"name: molecular_function description: The molecular function that is carried out by the gene product or complex todos: - 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This includes terms as well as publications and database objects like gene. This is not strictly part of the data managed by the model, it is for convenience, and should be refreshed from outside. URI: gocam:objects Applicable Classes Name Description Modifies Slot Model A model of a biological program consisting of a set of causally connected act... no Properties Range: Object Multivalued: True Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam LinkML Source name: objects description: All of the objects that are part of the model. This includes terms as well as publications and database objects like gene. This is not strictly part of the data managed by the model, it is for convenience, and should be refreshed from outside. from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: objects owner: Model domain_of: - Model range: Object inlined: true inlined_as_list: true","title":"Slot: objects"},{"location":"objects/#slot-objects","text":"All of the objects that are part of the model. This includes terms as well as publications and database objects like gene. This is not strictly part of the data managed by the model, it is for convenience, and should be refreshed from outside. 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This is not strictly part of the data managed by the model, it is for convenience, and should be refreshed from outside. from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: objects owner: Model domain_of: - Model range: Object inlined: true inlined_as_list: true","title":"LinkML Source"},{"location":"obsolete/","text":"Slot: obsolete URI: gocam:obsolete Applicable Classes Name Description Modifies Slot PublicationObject An object that represents a publication or other kind of reference no CellTypeTermObject A term object that represents a cell type term from CL no MolecularFunctionTermObject A term object that represents a molecular function term from GO no MoleculeTermObject A term object that represents a molecule term from CHEBI or UniProtKB no TaxonTermObject A term object that represents a taxon term from NCBITaxon no Object An abstract class for all identified objects in a model no BiologicalProcessTermObject A term object that represents a biological process term from GO no InformationBiomacromoleculeTermObject An abstract class for all information biomacromolecule term objects no GeneProductTermObject A term object that represents a gene product term from GO or UniProtKB no PhaseTermObject A term object that represents a phase term from GO or UBERON no TermObject An abstract class for all ontology term objects no ProteinComplexTermObject A term object that represents a protein complex term from GO no GrossAnatomicalStructureTermObject A term object that represents a gross anatomical structure term from UBERON no PredicateTermObject A term object that represents a taxon term from NCBITaxon no EvidenceTermObject A term object that represents an evidence term from ECO no CellularAnatomicalEntityTermObject A term object that represents a cellular anatomical entity term from GO no Properties Range: Boolean Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam LinkML Source name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: Object domain_of: - Object range: boolean","title":"Slot: obsolete"},{"location":"obsolete/#slot-obsolete","text":"URI: gocam:obsolete","title":"Slot: obsolete"},{"location":"obsolete/#applicable-classes","text":"Name Description Modifies Slot PublicationObject An object that represents a publication or other kind of reference no CellTypeTermObject A term object that represents a cell type term from CL no MolecularFunctionTermObject A term object that represents a molecular function term from GO no MoleculeTermObject A term object that represents a molecule term from CHEBI or UniProtKB no TaxonTermObject A term object that represents a taxon term from NCBITaxon no Object An abstract class for all identified objects in a model no BiologicalProcessTermObject A term object that represents a biological process term from GO no InformationBiomacromoleculeTermObject An abstract class for all information biomacromolecule term objects no GeneProductTermObject A term object that represents a gene product term from GO or UniProtKB no PhaseTermObject A term object that represents a phase term from GO or UBERON no TermObject An abstract class for all ontology term objects no ProteinComplexTermObject A term object that represents a protein complex term from GO no GrossAnatomicalStructureTermObject A term object that represents a gross anatomical structure term from UBERON no PredicateTermObject A term object that represents a taxon term from NCBITaxon no EvidenceTermObject A term object that represents an evidence term from ECO no CellularAnatomicalEntityTermObject A term object that represents a cellular anatomical entity term from GO no","title":"Applicable Classes"},{"location":"obsolete/#properties","text":"Range: Boolean","title":"Properties"},{"location":"obsolete/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"obsolete/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"obsolete/#linkml-source","text":"name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: Object domain_of: - Object range: boolean","title":"LinkML Source"},{"location":"occurs_in/","text":"Slot: occurs_in The cellular location in which the activity occurs URI: gocam:occurs_in Applicable Classes Name Description Modifies Slot Activity An individual activity in a causal model, representing the individual molecul... no Properties Range: CellularAnatomicalEntityAssociation Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam LinkML Source name: occurs_in description: The cellular location in which the activity occurs from_schema: https://w3id.org/gocam rank: 1000 alias: occurs_in owner: Activity domain_of: - Activity range: CellularAnatomicalEntityAssociation inlined: true","title":"Slot: occurs_in"},{"location":"occurs_in/#slot-occurs_in","text":"The cellular location in which the activity occurs URI: gocam:occurs_in","title":"Slot: occurs_in"},{"location":"occurs_in/#applicable-classes","text":"Name Description Modifies Slot Activity An individual activity in a causal model, representing the individual molecul... no","title":"Applicable Classes"},{"location":"occurs_in/#properties","text":"Range: CellularAnatomicalEntityAssociation","title":"Properties"},{"location":"occurs_in/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"occurs_in/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"occurs_in/#linkml-source","text":"name: occurs_in description: The cellular location in which the activity occurs from_schema: https://w3id.org/gocam rank: 1000 alias: occurs_in owner: Activity domain_of: - Activity range: CellularAnatomicalEntityAssociation inlined: true","title":"LinkML Source"},{"location":"part_of/","text":"Slot: part_of The larger biological process in which the activity is a part URI: gocam:part_of Applicable Classes Name Description Modifies Slot Activity An individual activity in a causal model, representing the individual molecul... no Properties Range: BiologicalProcessAssociation Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam LinkML Source name: part_of description: The larger biological process in which the activity is a part from_schema: https://w3id.org/gocam rank: 1000 alias: part_of owner: Activity domain_of: - Activity range: BiologicalProcessAssociation inlined: true","title":"Slot: part_of"},{"location":"part_of/#slot-part_of","text":"The larger biological process in which the activity is a part URI: gocam:part_of","title":"Slot: part_of"},{"location":"part_of/#applicable-classes","text":"Name Description Modifies Slot Activity An individual activity in a causal model, representing the individual molecul... no","title":"Applicable Classes"},{"location":"part_of/#properties","text":"Range: BiologicalProcessAssociation","title":"Properties"},{"location":"part_of/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"part_of/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"part_of/#linkml-source","text":"name: part_of description: The larger biological process in which the activity is a part from_schema: https://w3id.org/gocam rank: 1000 alias: part_of owner: Activity domain_of: - Activity range: BiologicalProcessAssociation inlined: true","title":"LinkML Source"},{"location":"predicate/","text":"Slot: predicate The RO relation that represents the type of relationship URI: gocam:predicate Applicable Classes Name Description Modifies Slot CausalAssociation A causal association between two activities no Properties Range: PredicateTermObject Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam LinkML Source name: predicate description: The RO relation that represents the type of relationship from_schema: https://w3id.org/gocam rank: 1000 alias: predicate owner: CausalAssociation domain_of: - CausalAssociation range: PredicateTermObject","title":"Slot: predicate"},{"location":"predicate/#slot-predicate","text":"The RO relation that represents the type of relationship URI: gocam:predicate","title":"Slot: predicate"},{"location":"predicate/#applicable-classes","text":"Name Description Modifies Slot CausalAssociation A causal association between two activities no","title":"Applicable Classes"},{"location":"predicate/#properties","text":"Range: PredicateTermObject","title":"Properties"},{"location":"predicate/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"predicate/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"predicate/#linkml-source","text":"name: predicate description: The RO relation that represents the type of relationship from_schema: https://w3id.org/gocam rank: 1000 alias: predicate owner: CausalAssociation domain_of: - CausalAssociation range: PredicateTermObject","title":"LinkML Source"},{"location":"provenances/","text":"Slot: provenances URI: gocam:provenances Applicable Classes Name Description Modifies Slot Association An abstract grouping for different kinds of evidence-associated provenance no EnabledByProteinComplexAssociation An association between an activity and a protein complex no TermAssociation An association between an activity and a term, potentially with extensions no EnabledByGeneProductAssociation An association between an activity and a gene product no MolecularFunctionAssociation An association between an activity and a molecular function term no EnabledByAssociation An association between an activity and the gene product or complex that carri... no BiologicalProcessAssociation An association between an activity and a biological process term no MoleculeAssociation An association between an activity and a molecule term no EvidenceItem An individual piece of evidence that is associated with an assertion in a mod... no Model A model of a biological program consisting of a set of causally connected act... no GrossAnatomyAssociation An association between an activity and a gross anatomical structure term no Activity An individual activity in a causal model, representing the individual molecul... no CellularAnatomicalEntityAssociation An association between an activity and a cellular anatomical entity term no CellTypeAssociation An association between an activity and a cell type term no CausalAssociation A causal association between two activities no Properties Range: String Identifier and Mapping Information LinkML Source name: provenances alias: provenances domain_of: - 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    ModelA model of a biological program consisting of a set of causally connected act...no
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    ModelA model of a biological program consisting of a set of causally connected act...no
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    EnabledByProteinComplexAssociationAn association between an activity and a protein complexyes
    TermAssociationAn association between an activity and a term, potentially with extensionsno
    EnabledByGeneProductAssociationAn association between an activity and a gene productyes
    MolecularFunctionAssociationAn association between an activity and a molecular function termyes
    EnabledByAssociationAn association between an activity and the gene product or complex that carri...no
    BiologicalProcessAssociationAn association between an activity and a biological process termyes
    MoleculeAssociationAn association between an activity and a molecule termyes
    EvidenceItemAn individual piece of evidence that is associated with an assertion in a mod...no
    GrossAnatomyAssociationAn association between an activity and a gross anatomical structure termyes
    CellularAnatomicalEntityAssociationAn association between an activity and a cellular anatomical entity termyes
    CellTypeAssociationAn association between an activity and a cell type termyes
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    NameDescriptionModifies Slot
    ModelA model of a biological program consisting of a set of causally connected act...no
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    name: title
-description: The human-readable descriptive title of the model
-from_schema: https://w3id.org/gocam
-rank: 1000
-slot_uri: dct:title
-alias: title
-owner: Model
-domain_of:
-- Model
-range: string
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    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
    NameDescriptionModifies Slot
    BiologicalProcessAssociationAn association between an activity and a biological process termno
    CellularAnatomicalEntityAssociationAn association between an activity and a cellular anatomical entity termno
    TermObjectAn abstract class for all ontology term objectsno
    MoleculeTermObjectA term object that represents a molecule term from CHEBI or UniProtKBno
    PublicationObjectAn object that represents a publication or other kind of referenceno
    TaxonTermObjectA term object that represents a taxon term from NCBITaxonno
    BiologicalProcessTermObjectA term object that represents a biological process term from GOno
    GeneProductTermObjectA term object that represents a gene product term from GO or UniProtKBno
    GrossAnatomyAssociationAn association between an activity and a gross anatomical structure termno
    PredicateTermObjectA term object that represents a taxon term from NCBITaxonno
    EvidenceTermObjectA term object that represents an evidence term from ECOno
    CellTypeTermObjectA term object that represents a cell type term from CLno
    ObjectAn abstract class for all identified objects in a modelno
    TermAssociationAn association between an activity and a term, potentially with extensionsno
    MolecularFunctionAssociationAn association between an activity and a molecular function termno
    EnabledByAssociationAn association between an activity and the gene product or complex that carri...no
    PhaseTermObjectA term object that represents a phase term from GO or UBERONno
    ProteinComplexTermObjectA term object that represents a protein complex term from GOno
    CellTypeAssociationAn association between an activity and a cell type termno
    CellularAnatomicalEntityTermObjectA term object that represents a cellular anatomical entity term from GOno
    AssociationAn abstract grouping for different kinds of evidence-associated provenanceno
    EnabledByProteinComplexAssociationAn association between an activity and a protein complexno
    MolecularFunctionTermObjectA term object that represents a molecular function term from GOno
    EnabledByGeneProductAssociationAn association between an activity and a gene productno
    MoleculeAssociationAn association between an activity and a molecule termno
    GrossAnatomicalStructureTermObjectA term object that represents a gross anatomical structure term from UBERONno
    InformationBiomacromoleculeTermObjectAn abstract class for all information biomacromolecule term objectsno
    CausalAssociationA causal association between two activitiesno
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-domain_of:
-- Association
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-range: string
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    URI: gocam:with_objects

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    Applicable Classes

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    NameDescriptionModifies Slot
    EvidenceItemAn individual piece of evidence that is associated with an assertion in a mod...no
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    name: with_objects
-description: Supporting database entities or terms
-from_schema: https://w3id.org/gocam
-aliases:
-- with
-- with/from
-rank: 1000
-multivalued: true
-alias: with_objects
-owner: EvidenceItem
-domain_of:
-- EvidenceItem
-range: Object
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    Applicable Classes

    +EnabledByAssociation +An association between an activity and the gene product or complex that carri... +no + + Association An abstract grouping for different kinds of evidence-associated provenance no +EnabledByGeneProductAssociation +An association between an activity and a gene product +no + + GrossAnatomyAssociation An association between an activity and a gross anatomical structure term no @@ -333,33 +343,18 @@

    Applicable Classes

    no -EvidenceItem -An individual piece of evidence that is associated with an assertion in a mod... -no - - CellularAnatomicalEntityAssociation An association between an activity and a cellular anatomical entity term no -MoleculeAssociation -An association between an activity and a molecule term -no - - TermAssociation An association between an activity and a term, potentially with extensions no -EnabledByProteinComplexAssociation -An association between an activity and a protein complex -no - - -CausalAssociation -A causal association between two activities +BiologicalProcessAssociation +An association between an activity and a biological process term no @@ -368,8 +363,8 @@

    Applicable Classes

    no -EnabledByGeneProductAssociation -An association between an activity and a gene product +CausalAssociation +A causal association between two activities no @@ -378,18 +373,23 @@

    Applicable Classes

    no -EnabledByAssociation -An association between an activity and the gene product or complex that carri... +EnabledByProteinComplexAssociation +An association between an activity and a protein complex no -BiologicalProcessAssociation -An association between an activity and a biological process term +Model +A model of a biological program consisting of a set of causally connected act... no -Model -A model of a biological program consisting of a set of causally connected act... +MoleculeAssociation +An association between an activity and a molecule term +no + + +EvidenceItem +An individual piece of evidence that is associated with an assertion in a mod... no diff --git a/search/search_index.json b/search/search_index.json index 812d159..895e4e4 100644 --- a/search/search_index.json +++ b/search/search_index.json @@ -1 +1 @@ -{"config":{"indexing":"full","lang":["en"],"min_search_length":3,"prebuild_index":false,"separator":"[\\s\\-]+"},"docs":[{"location":"","text":"gocam GO CAM LinkML schema (experimental) The central class in this datamodel is a Model . A model consists of a set of Activity objects. 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Double A real number that conforms to the xsd:double specification Float A real number that conforms to the xsd:float specification Integer An integer Jsonpath A string encoding a JSON Path Jsonpointer A string encoding a JSON Pointer Ncname Prefix part of CURIE Nodeidentifier A URI, CURIE or BNODE that represents a node in a model Objectidentifier A URI or CURIE that represents an object in the model Sparqlpath A string encoding a SPARQL Property Path String A character string Time A time object represents a (local) time of day, independent of any particular... Uri a complete URI Uriorcurie a URI or a CURIE","title":"Types"},{"location":"#subsets","text":"Subset Description","title":"Subsets"},{"location":"Activity/","text":"Class: Activity An individual activity in a causal model, representing the individual molecular activity of a single gene product or complex in the context of a particular model URI: gocam:Activity classDiagram class Activity click Activity href \"../Activity\" Activity : causal_associations Activity --> \"*\" CausalAssociation : causal_associations click CausalAssociation href \"../CausalAssociation\" Activity : enabled_by Activity --> \"0..1\" EnabledByAssociation : enabled_by click EnabledByAssociation href \"../EnabledByAssociation\" Activity : has_direct_input Activity --> \"0..1\" MoleculeAssociation : has_direct_input click MoleculeAssociation href \"../MoleculeAssociation\" Activity : id Activity : molecular_function Activity --> \"0..1\" MolecularFunctionAssociation : molecular_function click MolecularFunctionAssociation href \"../MolecularFunctionAssociation\" Activity : occurs_in Activity --> \"0..1\" CellularAnatomicalEntityAssociation : occurs_in click CellularAnatomicalEntityAssociation href \"../CellularAnatomicalEntityAssociation\" Activity : part_of Activity --> \"0..1\" BiologicalProcessAssociation : part_of click BiologicalProcessAssociation href \"../BiologicalProcessAssociation\" Activity : provenances Activity --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" Slots Name Cardinality and Range Description Inheritance id 1 Uriorcurie Identifier of the activity unit direct enabled_by 0..1 EnabledByAssociation The gene product or complex that carries out the activity direct molecular_function 0..1 MolecularFunctionAssociation The molecular function that is carried out by the gene product or complex direct occurs_in 0..1 CellularAnatomicalEntityAssociation The cellular location in which the activity occurs direct part_of 0..1 BiologicalProcessAssociation The larger biological process in which the activity is a part direct has_direct_input 0..1 MoleculeAssociation The input molecules that are directly consumed by the activity direct causal_associations * CausalAssociation The causal associations that connect this activity to other activities direct provenances * ProvenanceInfo Provenance information for the activity direct Usages used by used in type used Model activities range Activity CausalAssociation downstream_activity range Activity Aliases annoton Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:Activity native gocam:Activity LinkML Source Direct name: Activity description: An individual activity in a causal model, representing the individual molecular activity of a single gene product or complex in the context of a particular model from_schema: https://w3id.org/gocam aliases: - annoton attributes: id: name: id description: Identifier of the activity unit. Should be in gocam namespace. comments: - Typically does not need to be exposed to end-user, this exists to allow activity flows from_schema: https://w3id.org/gocam identifier: true domain_of: - Model - Activity - Object range: uriorcurie required: true enabled_by: name: enabled_by description: The gene product or complex that carries out the activity from_schema: https://w3id.org/gocam rank: 1000 domain_of: - Activity range: EnabledByAssociation inlined: true molecular_function: name: molecular_function description: The molecular function that is carried out by the gene product or complex todos: - currently BP, CC etc are at the level of the activity, not the MolecularFunctionAssociation from_schema: https://w3id.org/gocam rank: 1000 domain_of: - Activity range: MolecularFunctionAssociation inlined: true occurs_in: name: occurs_in description: The cellular location in which the activity occurs from_schema: https://w3id.org/gocam rank: 1000 domain_of: - Activity range: CellularAnatomicalEntityAssociation inlined: true part_of: name: part_of description: The larger biological process in which the activity is a part from_schema: https://w3id.org/gocam rank: 1000 domain_of: - Activity range: BiologicalProcessAssociation inlined: true has_direct_input: name: has_direct_input description: The input molecules that are directly consumed by the activity from_schema: https://w3id.org/gocam rank: 1000 domain_of: - Activity range: MoleculeAssociation inlined: true causal_associations: name: causal_associations description: The causal associations that connect this activity to other activities from_schema: https://w3id.org/gocam rank: 1000 multivalued: true domain_of: - Activity range: CausalAssociation inlined: true inlined_as_list: true provenances: name: provenances description: Provenance information for the activity from_schema: https://w3id.org/gocam multivalued: true domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true Induced name: Activity description: An individual activity in a causal model, representing the individual molecular activity of a single gene product or complex in the context of a particular model from_schema: https://w3id.org/gocam aliases: - annoton attributes: id: name: id description: Identifier of the activity unit. Should be in gocam namespace. comments: - Typically does not need to be exposed to end-user, this exists to allow activity flows from_schema: https://w3id.org/gocam identifier: true alias: id owner: Activity domain_of: - Model - Activity - Object range: uriorcurie required: true enabled_by: name: enabled_by description: The gene product or complex that carries out the activity from_schema: https://w3id.org/gocam rank: 1000 alias: enabled_by owner: Activity domain_of: - Activity range: EnabledByAssociation inlined: true molecular_function: name: molecular_function description: The molecular function that is carried out by the gene product or complex todos: - currently BP, CC etc are at the level of the activity, not the MolecularFunctionAssociation from_schema: https://w3id.org/gocam rank: 1000 alias: molecular_function owner: Activity domain_of: - Activity range: MolecularFunctionAssociation inlined: true occurs_in: name: occurs_in description: The cellular location in which the activity occurs from_schema: https://w3id.org/gocam rank: 1000 alias: occurs_in owner: Activity domain_of: - Activity range: CellularAnatomicalEntityAssociation inlined: true part_of: name: part_of description: The larger biological process in which the activity is a part from_schema: https://w3id.org/gocam rank: 1000 alias: part_of owner: Activity domain_of: - Activity range: BiologicalProcessAssociation inlined: true has_direct_input: name: has_direct_input description: The input molecules that are directly consumed by the activity from_schema: https://w3id.org/gocam rank: 1000 alias: has_direct_input owner: Activity domain_of: - Activity range: MoleculeAssociation inlined: true causal_associations: name: causal_associations description: The causal associations that connect this activity to other activities from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: causal_associations owner: Activity domain_of: - Activity range: CausalAssociation inlined: true inlined_as_list: true provenances: name: provenances description: Provenance information for the activity from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: Activity domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Class: Activity"},{"location":"Activity/#class-activity","text":"An individual activity in a causal model, representing the individual molecular activity of a single gene product or complex in the context of a particular model URI: gocam:Activity classDiagram class Activity click Activity href \"../Activity\" Activity : causal_associations Activity --> \"*\" CausalAssociation : causal_associations click CausalAssociation href \"../CausalAssociation\" Activity : enabled_by Activity --> \"0..1\" EnabledByAssociation : enabled_by click EnabledByAssociation href \"../EnabledByAssociation\" Activity : has_direct_input Activity --> \"0..1\" MoleculeAssociation : has_direct_input click MoleculeAssociation href \"../MoleculeAssociation\" Activity : id Activity : molecular_function Activity --> \"0..1\" MolecularFunctionAssociation : molecular_function click MolecularFunctionAssociation href \"../MolecularFunctionAssociation\" Activity : occurs_in Activity --> \"0..1\" CellularAnatomicalEntityAssociation : occurs_in click CellularAnatomicalEntityAssociation href \"../CellularAnatomicalEntityAssociation\" Activity : part_of Activity --> \"0..1\" BiologicalProcessAssociation : part_of click BiologicalProcessAssociation href \"../BiologicalProcessAssociation\" Activity : provenances Activity --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\"","title":"Class: Activity"},{"location":"Activity/#slots","text":"Name Cardinality and Range Description Inheritance id 1 Uriorcurie Identifier of the activity unit direct enabled_by 0..1 EnabledByAssociation The gene product or complex that carries out the activity direct molecular_function 0..1 MolecularFunctionAssociation The molecular function that is carried out by the gene product or complex direct occurs_in 0..1 CellularAnatomicalEntityAssociation The cellular location in which the activity occurs direct part_of 0..1 BiologicalProcessAssociation The larger biological process in which the activity is a part direct has_direct_input 0..1 MoleculeAssociation The input molecules that are directly consumed by the activity direct causal_associations * CausalAssociation The causal associations that connect this activity to other activities direct provenances * ProvenanceInfo Provenance information for the activity direct","title":"Slots"},{"location":"Activity/#usages","text":"used by used in type used Model activities range Activity CausalAssociation downstream_activity range Activity","title":"Usages"},{"location":"Activity/#aliases","text":"annoton","title":"Aliases"},{"location":"Activity/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Activity/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"Activity/#mappings","text":"Mapping Type Mapped Value self gocam:Activity native gocam:Activity","title":"Mappings"},{"location":"Activity/#linkml-source","text":"","title":"LinkML Source"},{"location":"Activity/#direct","text":"name: Activity description: An individual activity in a causal model, representing the individual molecular activity of a single gene product or complex in the context of a particular model from_schema: https://w3id.org/gocam aliases: - annoton attributes: id: name: id description: Identifier of the activity unit. Should be in gocam namespace. comments: - Typically does not need to be exposed to end-user, this exists to allow activity flows from_schema: https://w3id.org/gocam identifier: true domain_of: - Model - Activity - Object range: uriorcurie required: true enabled_by: name: enabled_by description: The gene product or complex that carries out the activity from_schema: https://w3id.org/gocam rank: 1000 domain_of: - Activity range: EnabledByAssociation inlined: true molecular_function: name: molecular_function description: The molecular function that is carried out by the gene product or complex todos: - currently BP, CC etc are at the level of the activity, not the MolecularFunctionAssociation from_schema: https://w3id.org/gocam rank: 1000 domain_of: - Activity range: MolecularFunctionAssociation inlined: true occurs_in: name: occurs_in description: The cellular location in which the activity occurs from_schema: https://w3id.org/gocam rank: 1000 domain_of: - Activity range: CellularAnatomicalEntityAssociation inlined: true part_of: name: part_of description: The larger biological process in which the activity is a part from_schema: https://w3id.org/gocam rank: 1000 domain_of: - Activity range: BiologicalProcessAssociation inlined: true has_direct_input: name: has_direct_input description: The input molecules that are directly consumed by the activity from_schema: https://w3id.org/gocam rank: 1000 domain_of: - Activity range: MoleculeAssociation inlined: true causal_associations: name: causal_associations description: The causal associations that connect this activity to other activities from_schema: https://w3id.org/gocam rank: 1000 multivalued: true domain_of: - Activity range: CausalAssociation inlined: true inlined_as_list: true provenances: name: provenances description: Provenance information for the activity from_schema: https://w3id.org/gocam multivalued: true domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Direct"},{"location":"Activity/#induced","text":"name: Activity description: An individual activity in a causal model, representing the individual molecular activity of a single gene product or complex in the context of a particular model from_schema: https://w3id.org/gocam aliases: - annoton attributes: id: name: id description: Identifier of the activity unit. Should be in gocam namespace. comments: - Typically does not need to be exposed to end-user, this exists to allow activity flows from_schema: https://w3id.org/gocam identifier: true alias: id owner: Activity domain_of: - Model - Activity - Object range: uriorcurie required: true enabled_by: name: enabled_by description: The gene product or complex that carries out the activity from_schema: https://w3id.org/gocam rank: 1000 alias: enabled_by owner: Activity domain_of: - Activity range: EnabledByAssociation inlined: true molecular_function: name: molecular_function description: The molecular function that is carried out by the gene product or complex todos: - currently BP, CC etc are at the level of the activity, not the MolecularFunctionAssociation from_schema: https://w3id.org/gocam rank: 1000 alias: molecular_function owner: Activity domain_of: - Activity range: MolecularFunctionAssociation inlined: true occurs_in: name: occurs_in description: The cellular location in which the activity occurs from_schema: https://w3id.org/gocam rank: 1000 alias: occurs_in owner: Activity domain_of: - Activity range: CellularAnatomicalEntityAssociation inlined: true part_of: name: part_of description: The larger biological process in which the activity is a part from_schema: https://w3id.org/gocam rank: 1000 alias: part_of owner: Activity domain_of: - Activity range: BiologicalProcessAssociation inlined: true has_direct_input: name: has_direct_input description: The input molecules that are directly consumed by the activity from_schema: https://w3id.org/gocam rank: 1000 alias: has_direct_input owner: Activity domain_of: - Activity range: MoleculeAssociation inlined: true causal_associations: name: causal_associations description: The causal associations that connect this activity to other activities from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: causal_associations owner: Activity domain_of: - Activity range: CausalAssociation inlined: true inlined_as_list: true provenances: name: provenances description: Provenance information for the activity from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: Activity domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Induced"},{"location":"Association/","text":"Class: Association An abstract grouping for different kinds of evidence-associated provenance NOTE : this is an abstract class and should not be instantiated directly URI: gocam:Association classDiagram class Association click Association href \"../Association\" Association <|-- EnabledByAssociation click EnabledByAssociation href \"../EnabledByAssociation\" Association <|-- CausalAssociation click CausalAssociation href \"../CausalAssociation\" Association <|-- TermAssociation click TermAssociation href \"../TermAssociation\" Association : evidence Association --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" Association : provenances Association --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" Association : type Inheritance Association EnabledByAssociation CausalAssociation TermAssociation Slots Name Cardinality and Range Description Inheritance type 0..1 String direct evidence * EvidenceItem direct provenances * ProvenanceInfo direct Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:Association native gocam:Association LinkML Source Direct name: Association description: An abstract grouping for different kinds of evidence-associated provenance from_schema: https://w3id.org/gocam abstract: true attributes: type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true domain_of: - Association - Object evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true Induced name: Association description: An abstract grouping for different kinds of evidence-associated provenance from_schema: https://w3id.org/gocam abstract: true attributes: type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: Association domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: Association domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: Association domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Class: Association"},{"location":"Association/#class-association","text":"An abstract grouping for different kinds of evidence-associated provenance NOTE : this is an abstract class and should not be instantiated directly URI: gocam:Association classDiagram class Association click Association href \"../Association\" Association <|-- EnabledByAssociation click EnabledByAssociation href \"../EnabledByAssociation\" Association <|-- CausalAssociation click CausalAssociation href \"../CausalAssociation\" Association <|-- TermAssociation click TermAssociation href \"../TermAssociation\" Association : evidence Association --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" Association : provenances Association --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" Association : type","title":"Class: Association"},{"location":"Association/#inheritance","text":"Association EnabledByAssociation CausalAssociation TermAssociation","title":"Inheritance"},{"location":"Association/#slots","text":"Name Cardinality and Range Description Inheritance type 0..1 String direct evidence * EvidenceItem direct provenances * ProvenanceInfo direct","title":"Slots"},{"location":"Association/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Association/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"Association/#mappings","text":"Mapping Type Mapped Value self gocam:Association native gocam:Association","title":"Mappings"},{"location":"Association/#linkml-source","text":"","title":"LinkML Source"},{"location":"Association/#direct","text":"name: Association description: An abstract grouping for different kinds of evidence-associated provenance from_schema: https://w3id.org/gocam abstract: true attributes: type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true domain_of: - Association - Object evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Direct"},{"location":"Association/#induced","text":"name: Association description: An abstract grouping for different kinds of evidence-associated provenance from_schema: https://w3id.org/gocam abstract: true attributes: type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: Association domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: Association domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: Association domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Induced"},{"location":"BiologicalProcessAssociation/","text":"Class: BiologicalProcessAssociation An association between an activity and a biological process term URI: gocam:BiologicalProcessAssociation classDiagram class BiologicalProcessAssociation click BiologicalProcessAssociation href \"../BiologicalProcessAssociation\" TermAssociation <|-- BiologicalProcessAssociation click TermAssociation href \"../TermAssociation\" BiologicalProcessAssociation : evidence BiologicalProcessAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" BiologicalProcessAssociation : provenances BiologicalProcessAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" BiologicalProcessAssociation : term BiologicalProcessAssociation --> \"0..1\" BiologicalProcessTermObject : term click BiologicalProcessTermObject href \"../BiologicalProcessTermObject\" BiologicalProcessAssociation : type Inheritance Association TermAssociation BiologicalProcessAssociation Slots Name Cardinality and Range Description Inheritance term 0..1 BiologicalProcessTermObject The ontology term that describes the nature of the association TermAssociation type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association Usages used by used in type used Activity part_of range BiologicalProcessAssociation Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:BiologicalProcessAssociation native gocam:BiologicalProcessAssociation LinkML Source Direct name: BiologicalProcessAssociation description: An association between an activity and a biological process term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: BiologicalProcessTermObject happens_during: name: happens_during description: Optional extension describing where the BP takes place range: PhaseTermObject part_of: name: part_of description: Optional extension allowing hierarchical nesting of BPs range: BiologicalProcessTermObject Induced name: BiologicalProcessAssociation description: An association between an activity and a biological process term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: BiologicalProcessTermObject happens_during: name: happens_during description: Optional extension describing where the BP takes place range: PhaseTermObject part_of: name: part_of description: Optional extension allowing hierarchical nesting of BPs range: BiologicalProcessTermObject attributes: term: name: term description: The ontology term that describes the nature of the association from_schema: https://w3id.org/gocam alias: term owner: BiologicalProcessAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: BiologicalProcessTermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: BiologicalProcessAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: BiologicalProcessAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: BiologicalProcessAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Class: BiologicalProcessAssociation"},{"location":"BiologicalProcessAssociation/#class-biologicalprocessassociation","text":"An association between an activity and a biological process term URI: gocam:BiologicalProcessAssociation classDiagram class BiologicalProcessAssociation click BiologicalProcessAssociation href \"../BiologicalProcessAssociation\" TermAssociation <|-- BiologicalProcessAssociation click TermAssociation href \"../TermAssociation\" BiologicalProcessAssociation : evidence BiologicalProcessAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" BiologicalProcessAssociation : provenances BiologicalProcessAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" BiologicalProcessAssociation : term BiologicalProcessAssociation --> \"0..1\" BiologicalProcessTermObject : term click BiologicalProcessTermObject href \"../BiologicalProcessTermObject\" BiologicalProcessAssociation : type","title":"Class: BiologicalProcessAssociation"},{"location":"BiologicalProcessAssociation/#inheritance","text":"Association TermAssociation BiologicalProcessAssociation","title":"Inheritance"},{"location":"BiologicalProcessAssociation/#slots","text":"Name Cardinality and Range Description Inheritance term 0..1 BiologicalProcessTermObject The ontology term that describes the nature of the association TermAssociation type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association","title":"Slots"},{"location":"BiologicalProcessAssociation/#usages","text":"used by used in type used Activity part_of range BiologicalProcessAssociation","title":"Usages"},{"location":"BiologicalProcessAssociation/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"BiologicalProcessAssociation/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"BiologicalProcessAssociation/#mappings","text":"Mapping Type Mapped Value self gocam:BiologicalProcessAssociation native gocam:BiologicalProcessAssociation","title":"Mappings"},{"location":"BiologicalProcessAssociation/#linkml-source","text":"","title":"LinkML Source"},{"location":"BiologicalProcessAssociation/#direct","text":"name: BiologicalProcessAssociation description: An association between an activity and a biological process term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: BiologicalProcessTermObject happens_during: name: happens_during description: Optional extension describing where the BP takes place range: PhaseTermObject part_of: name: part_of description: Optional extension allowing hierarchical nesting of BPs range: BiologicalProcessTermObject","title":"Direct"},{"location":"BiologicalProcessAssociation/#induced","text":"name: BiologicalProcessAssociation description: An association between an activity and a biological process term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: BiologicalProcessTermObject happens_during: name: happens_during description: Optional extension describing where the BP takes place range: PhaseTermObject part_of: name: part_of description: Optional extension allowing hierarchical nesting of BPs range: BiologicalProcessTermObject attributes: term: name: term description: The ontology term that describes the nature of the association from_schema: https://w3id.org/gocam alias: term owner: BiologicalProcessAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: BiologicalProcessTermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: BiologicalProcessAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: BiologicalProcessAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: BiologicalProcessAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Induced"},{"location":"BiologicalProcessTermObject/","text":"Class: BiologicalProcessTermObject A term object that represents a biological process term from GO URI: gocam:BiologicalProcessTermObject classDiagram class BiologicalProcessTermObject click BiologicalProcessTermObject href \"../BiologicalProcessTermObject\" TermObject <|-- BiologicalProcessTermObject click TermObject href \"../TermObject\" BiologicalProcessTermObject : id BiologicalProcessTermObject : label BiologicalProcessTermObject : obsolete BiologicalProcessTermObject : type Inheritance Object TermObject BiologicalProcessTermObject Slots Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object Usages used by used in type used BiologicalProcessAssociation term range BiologicalProcessTermObject Identifier and Mapping Information Valid ID Prefixes Instances of this class should have identifiers with one of the following prefixes: GO Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:BiologicalProcessTermObject native gocam:BiologicalProcessTermObject LinkML Source Direct name: BiologicalProcessTermObject id_prefixes: - GO description: A term object that represents a biological process term from GO from_schema: https://w3id.org/gocam is_a: TermObject Induced name: BiologicalProcessTermObject id_prefixes: - GO description: A term object that represents a biological process term from GO from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: BiologicalProcessTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: BiologicalProcessTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: BiologicalProcessTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: BiologicalProcessTermObject domain_of: - Object range: boolean","title":"Class: BiologicalProcessTermObject"},{"location":"BiologicalProcessTermObject/#class-biologicalprocesstermobject","text":"A term object that represents a biological process term from GO URI: gocam:BiologicalProcessTermObject classDiagram class BiologicalProcessTermObject click BiologicalProcessTermObject href \"../BiologicalProcessTermObject\" TermObject <|-- BiologicalProcessTermObject click TermObject href \"../TermObject\" BiologicalProcessTermObject : id BiologicalProcessTermObject : label BiologicalProcessTermObject : obsolete BiologicalProcessTermObject : type","title":"Class: BiologicalProcessTermObject"},{"location":"BiologicalProcessTermObject/#inheritance","text":"Object TermObject BiologicalProcessTermObject","title":"Inheritance"},{"location":"BiologicalProcessTermObject/#slots","text":"Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object","title":"Slots"},{"location":"BiologicalProcessTermObject/#usages","text":"used by used in type used BiologicalProcessAssociation term range BiologicalProcessTermObject","title":"Usages"},{"location":"BiologicalProcessTermObject/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"BiologicalProcessTermObject/#valid-id-prefixes","text":"Instances of this class should have identifiers with one of the following prefixes: GO","title":"Valid ID Prefixes"},{"location":"BiologicalProcessTermObject/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"BiologicalProcessTermObject/#mappings","text":"Mapping Type Mapped Value self gocam:BiologicalProcessTermObject native gocam:BiologicalProcessTermObject","title":"Mappings"},{"location":"BiologicalProcessTermObject/#linkml-source","text":"","title":"LinkML Source"},{"location":"BiologicalProcessTermObject/#direct","text":"name: BiologicalProcessTermObject id_prefixes: - GO description: A term object that represents a biological process term from GO from_schema: https://w3id.org/gocam is_a: TermObject","title":"Direct"},{"location":"BiologicalProcessTermObject/#induced","text":"name: BiologicalProcessTermObject id_prefixes: - GO description: A term object that represents a biological process term from GO from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: BiologicalProcessTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: BiologicalProcessTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: BiologicalProcessTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: BiologicalProcessTermObject domain_of: - Object range: boolean","title":"Induced"},{"location":"Boolean/","text":"Type: Boolean A binary (true or false) value URI: xsd:boolean base : Bool uri : xsd:boolean repr : bool Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam","title":"Type: Boolean"},{"location":"Boolean/#type-boolean","text":"A binary (true or false) value URI: xsd:boolean base : Bool uri : xsd:boolean repr : bool","title":"Type: Boolean"},{"location":"Boolean/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Boolean/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"CausalAssociation/","text":"Class: CausalAssociation A causal association between two activities URI: gocam:CausalAssociation classDiagram class CausalAssociation click CausalAssociation href \"../CausalAssociation\" Association <|-- CausalAssociation click Association href \"../Association\" CausalAssociation : downstream_activity CausalAssociation --> \"0..1\" Activity : downstream_activity click Activity href \"../Activity\" CausalAssociation : evidence CausalAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" CausalAssociation : predicate CausalAssociation --> \"0..1\" PredicateTermObject : predicate click PredicateTermObject href \"../PredicateTermObject\" CausalAssociation : provenances CausalAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" CausalAssociation : type Inheritance Association CausalAssociation Slots Name Cardinality and Range Description Inheritance predicate 0..1 PredicateTermObject The RO relation that represents the type of relationship direct downstream_activity 0..1 Activity The activity unit that is downstream of this one direct type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association Usages used by used in type used Activity causal_associations range CausalAssociation Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:CausalAssociation native gocam:CausalAssociation LinkML Source Direct name: CausalAssociation description: A causal association between two activities from_schema: https://w3id.org/gocam is_a: Association attributes: predicate: name: predicate description: The RO relation that represents the type of relationship from_schema: https://w3id.org/gocam rank: 1000 domain_of: - CausalAssociation range: PredicateTermObject downstream_activity: name: downstream_activity description: The activity unit that is downstream of this one from_schema: https://w3id.org/gocam aliases: - object rank: 1000 domain_of: - CausalAssociation range: Activity Induced name: CausalAssociation description: A causal association between two activities from_schema: https://w3id.org/gocam is_a: Association attributes: predicate: name: predicate description: The RO relation that represents the type of relationship from_schema: https://w3id.org/gocam rank: 1000 alias: predicate owner: CausalAssociation domain_of: - CausalAssociation range: PredicateTermObject downstream_activity: name: downstream_activity description: The activity unit that is downstream of this one from_schema: https://w3id.org/gocam aliases: - object rank: 1000 alias: downstream_activity owner: CausalAssociation domain_of: - CausalAssociation range: Activity type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: CausalAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: CausalAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: CausalAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Class: CausalAssociation"},{"location":"CausalAssociation/#class-causalassociation","text":"A causal association between two activities URI: gocam:CausalAssociation classDiagram class CausalAssociation click CausalAssociation href \"../CausalAssociation\" Association <|-- CausalAssociation click Association href \"../Association\" CausalAssociation : downstream_activity CausalAssociation --> \"0..1\" Activity : downstream_activity click Activity href \"../Activity\" CausalAssociation : evidence CausalAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" CausalAssociation : predicate CausalAssociation --> \"0..1\" PredicateTermObject : predicate click PredicateTermObject href \"../PredicateTermObject\" CausalAssociation : provenances CausalAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" CausalAssociation : type","title":"Class: CausalAssociation"},{"location":"CausalAssociation/#inheritance","text":"Association CausalAssociation","title":"Inheritance"},{"location":"CausalAssociation/#slots","text":"Name Cardinality and Range Description Inheritance predicate 0..1 PredicateTermObject The RO relation that represents the type of relationship direct downstream_activity 0..1 Activity The activity unit that is downstream of this one direct type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association","title":"Slots"},{"location":"CausalAssociation/#usages","text":"used by used in type used Activity causal_associations range CausalAssociation","title":"Usages"},{"location":"CausalAssociation/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"CausalAssociation/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"CausalAssociation/#mappings","text":"Mapping Type Mapped Value self gocam:CausalAssociation native gocam:CausalAssociation","title":"Mappings"},{"location":"CausalAssociation/#linkml-source","text":"","title":"LinkML Source"},{"location":"CausalAssociation/#direct","text":"name: CausalAssociation description: A causal association between two activities from_schema: https://w3id.org/gocam is_a: Association attributes: predicate: name: predicate description: The RO relation that represents the type of relationship from_schema: https://w3id.org/gocam rank: 1000 domain_of: - CausalAssociation range: PredicateTermObject downstream_activity: name: downstream_activity description: The activity unit that is downstream of this one from_schema: https://w3id.org/gocam aliases: - object rank: 1000 domain_of: - CausalAssociation range: Activity","title":"Direct"},{"location":"CausalAssociation/#induced","text":"name: CausalAssociation description: A causal association between two activities from_schema: https://w3id.org/gocam is_a: Association attributes: predicate: name: predicate description: The RO relation that represents the type of relationship from_schema: https://w3id.org/gocam rank: 1000 alias: predicate owner: CausalAssociation domain_of: - CausalAssociation range: PredicateTermObject downstream_activity: name: downstream_activity description: The activity unit that is downstream of this one from_schema: https://w3id.org/gocam aliases: - object rank: 1000 alias: downstream_activity owner: CausalAssociation domain_of: - CausalAssociation range: Activity type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: CausalAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: CausalAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: CausalAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Induced"},{"location":"CausalPredicateEnum/","text":"Enum: CausalPredicateEnum URI: CausalPredicateEnum Permissible Values Value Meaning Description causally upstream of, positive effect RO:0002304 causally upstream of, negative effect RO:0002305 causally upstream of RO:0002411 immediately causally upstream of RO:0002412 causally upstream of or within RO:0002418 causally upstream of or within, negative effect RO:0004046 causally upstream of or within, positive effect RO:0004047 regulates RO:0002211 negatively regulates RO:0002212 positively regulates RO:0002213 Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam LinkML Source name: CausalPredicateEnum from_schema: https://w3id.org/gocam rank: 1000 permissible_values: causally upstream of, positive effect: text: causally upstream of, positive effect meaning: RO:0002304 causally upstream of, negative effect: text: causally upstream of, negative effect meaning: RO:0002305 causally upstream of: text: causally upstream of meaning: RO:0002411 immediately causally upstream of: text: immediately causally upstream of meaning: RO:0002412 causally upstream of or within: text: causally upstream of or within meaning: RO:0002418 causally upstream of or within, negative effect: text: causally upstream of or within, negative effect meaning: RO:0004046 causally upstream of or within, positive effect: text: causally upstream of or within, positive effect meaning: RO:0004047 regulates: text: regulates meaning: RO:0002211 negatively regulates: text: negatively regulates meaning: RO:0002212 positively regulates: text: positively regulates meaning: RO:0002213","title":"Enum: CausalPredicateEnum"},{"location":"CausalPredicateEnum/#enum-causalpredicateenum","text":"URI: CausalPredicateEnum","title":"Enum: CausalPredicateEnum"},{"location":"CausalPredicateEnum/#permissible-values","text":"Value Meaning Description causally upstream of, positive effect RO:0002304 causally upstream of, negative effect RO:0002305 causally upstream of RO:0002411 immediately causally upstream of RO:0002412 causally upstream of or within RO:0002418 causally upstream of or within, negative effect RO:0004046 causally upstream of or within, positive effect RO:0004047 regulates RO:0002211 negatively regulates RO:0002212 positively regulates RO:0002213","title":"Permissible Values"},{"location":"CausalPredicateEnum/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"CausalPredicateEnum/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"CausalPredicateEnum/#linkml-source","text":"name: CausalPredicateEnum from_schema: https://w3id.org/gocam rank: 1000 permissible_values: causally upstream of, positive effect: text: causally upstream of, positive effect meaning: RO:0002304 causally upstream of, negative effect: text: causally upstream of, negative effect meaning: RO:0002305 causally upstream of: text: causally upstream of meaning: RO:0002411 immediately causally upstream of: text: immediately causally upstream of meaning: RO:0002412 causally upstream of or within: text: causally upstream of or within meaning: RO:0002418 causally upstream of or within, negative effect: text: causally upstream of or within, negative effect meaning: RO:0004046 causally upstream of or within, positive effect: text: causally upstream of or within, positive effect meaning: RO:0004047 regulates: text: regulates meaning: RO:0002211 negatively regulates: text: negatively regulates meaning: RO:0002212 positively regulates: text: positively regulates meaning: RO:0002213","title":"LinkML Source"},{"location":"CellTypeAssociation/","text":"Class: CellTypeAssociation An association between an activity and a cell type term URI: gocam:CellTypeAssociation classDiagram class CellTypeAssociation click CellTypeAssociation href \"../CellTypeAssociation\" TermAssociation <|-- CellTypeAssociation click TermAssociation href \"../TermAssociation\" CellTypeAssociation : evidence CellTypeAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" CellTypeAssociation : provenances CellTypeAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" CellTypeAssociation : term CellTypeAssociation --> \"0..1\" CellTypeTermObject : term click CellTypeTermObject href \"../CellTypeTermObject\" CellTypeAssociation : type Inheritance Association TermAssociation CellTypeAssociation Slots Name Cardinality and Range Description Inheritance term 0..1 CellTypeTermObject The ontology term that describes the nature of the association TermAssociation type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:CellTypeAssociation native gocam:CellTypeAssociation LinkML Source Direct name: CellTypeAssociation description: An association between an activity and a cell type term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: CellTypeTermObject part_of: name: part_of range: GrossAnatomyAssociation Induced name: CellTypeAssociation description: An association between an activity and a cell type term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: CellTypeTermObject part_of: name: part_of range: GrossAnatomyAssociation attributes: term: name: term description: The ontology term that describes the nature of the association from_schema: https://w3id.org/gocam alias: term owner: CellTypeAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: CellTypeTermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: CellTypeAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: CellTypeAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: CellTypeAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Class: CellTypeAssociation"},{"location":"CellTypeAssociation/#class-celltypeassociation","text":"An association between an activity and a cell type term URI: gocam:CellTypeAssociation classDiagram class CellTypeAssociation click CellTypeAssociation href \"../CellTypeAssociation\" TermAssociation <|-- CellTypeAssociation click TermAssociation href \"../TermAssociation\" CellTypeAssociation : evidence CellTypeAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" CellTypeAssociation : provenances CellTypeAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" CellTypeAssociation : term CellTypeAssociation --> \"0..1\" CellTypeTermObject : term click CellTypeTermObject href \"../CellTypeTermObject\" CellTypeAssociation : type","title":"Class: CellTypeAssociation"},{"location":"CellTypeAssociation/#inheritance","text":"Association TermAssociation CellTypeAssociation","title":"Inheritance"},{"location":"CellTypeAssociation/#slots","text":"Name Cardinality and Range Description Inheritance term 0..1 CellTypeTermObject The ontology term that describes the nature of the association TermAssociation type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association","title":"Slots"},{"location":"CellTypeAssociation/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"CellTypeAssociation/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"CellTypeAssociation/#mappings","text":"Mapping Type Mapped Value self gocam:CellTypeAssociation native gocam:CellTypeAssociation","title":"Mappings"},{"location":"CellTypeAssociation/#linkml-source","text":"","title":"LinkML Source"},{"location":"CellTypeAssociation/#direct","text":"name: CellTypeAssociation description: An association between an activity and a cell type term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: CellTypeTermObject part_of: name: part_of range: GrossAnatomyAssociation","title":"Direct"},{"location":"CellTypeAssociation/#induced","text":"name: CellTypeAssociation description: An association between an activity and a cell type term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: CellTypeTermObject part_of: name: part_of range: GrossAnatomyAssociation attributes: term: name: term description: The ontology term that describes the nature of the association from_schema: https://w3id.org/gocam alias: term owner: CellTypeAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: CellTypeTermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: CellTypeAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: CellTypeAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: CellTypeAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Induced"},{"location":"CellTypeTermObject/","text":"Class: CellTypeTermObject A term object that represents a cell type term from CL URI: gocam:CellTypeTermObject classDiagram class CellTypeTermObject click CellTypeTermObject href \"../CellTypeTermObject\" TermObject <|-- CellTypeTermObject click TermObject href \"../TermObject\" CellTypeTermObject : id CellTypeTermObject : label CellTypeTermObject : obsolete CellTypeTermObject : type Inheritance Object TermObject CellTypeTermObject Slots Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object Usages used by used in type used CellTypeAssociation term range CellTypeTermObject Identifier and Mapping Information Valid ID Prefixes Instances of this class should have identifiers with one of the following prefixes: CL PO FAO DDANAT Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:CellTypeTermObject native gocam:CellTypeTermObject LinkML Source Direct name: CellTypeTermObject id_prefixes: - CL - PO - FAO - DDANAT description: A term object that represents a cell type term from CL from_schema: https://w3id.org/gocam is_a: TermObject Induced name: CellTypeTermObject id_prefixes: - CL - PO - FAO - DDANAT description: A term object that represents a cell type term from CL from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: CellTypeTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: CellTypeTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: CellTypeTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: CellTypeTermObject domain_of: - Object range: boolean","title":"Class: CellTypeTermObject"},{"location":"CellTypeTermObject/#class-celltypetermobject","text":"A term object that represents a cell type term from CL URI: gocam:CellTypeTermObject classDiagram class CellTypeTermObject click CellTypeTermObject href \"../CellTypeTermObject\" TermObject <|-- CellTypeTermObject click TermObject href \"../TermObject\" CellTypeTermObject : id CellTypeTermObject : label CellTypeTermObject : obsolete CellTypeTermObject : type","title":"Class: CellTypeTermObject"},{"location":"CellTypeTermObject/#inheritance","text":"Object TermObject CellTypeTermObject","title":"Inheritance"},{"location":"CellTypeTermObject/#slots","text":"Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object","title":"Slots"},{"location":"CellTypeTermObject/#usages","text":"used by used in type used CellTypeAssociation term range CellTypeTermObject","title":"Usages"},{"location":"CellTypeTermObject/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"CellTypeTermObject/#valid-id-prefixes","text":"Instances of this class should have identifiers with one of the following prefixes: CL PO FAO DDANAT","title":"Valid ID Prefixes"},{"location":"CellTypeTermObject/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"CellTypeTermObject/#mappings","text":"Mapping Type Mapped Value self gocam:CellTypeTermObject native gocam:CellTypeTermObject","title":"Mappings"},{"location":"CellTypeTermObject/#linkml-source","text":"","title":"LinkML Source"},{"location":"CellTypeTermObject/#direct","text":"name: CellTypeTermObject id_prefixes: - CL - PO - FAO - DDANAT description: A term object that represents a cell type term from CL from_schema: https://w3id.org/gocam is_a: TermObject","title":"Direct"},{"location":"CellTypeTermObject/#induced","text":"name: CellTypeTermObject id_prefixes: - CL - PO - FAO - DDANAT description: A term object that represents a cell type term from CL from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: CellTypeTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: CellTypeTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: CellTypeTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: CellTypeTermObject domain_of: - Object range: boolean","title":"Induced"},{"location":"CellularAnatomicalEntityAssociation/","text":"Class: CellularAnatomicalEntityAssociation An association between an activity and a cellular anatomical entity term URI: gocam:CellularAnatomicalEntityAssociation classDiagram class CellularAnatomicalEntityAssociation click CellularAnatomicalEntityAssociation href \"../CellularAnatomicalEntityAssociation\" TermAssociation <|-- CellularAnatomicalEntityAssociation click TermAssociation href \"../TermAssociation\" CellularAnatomicalEntityAssociation : evidence CellularAnatomicalEntityAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" CellularAnatomicalEntityAssociation : provenances CellularAnatomicalEntityAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" CellularAnatomicalEntityAssociation : term CellularAnatomicalEntityAssociation --> \"0..1\" CellularAnatomicalEntityTermObject : term click CellularAnatomicalEntityTermObject href \"../CellularAnatomicalEntityTermObject\" CellularAnatomicalEntityAssociation : type Inheritance Association TermAssociation CellularAnatomicalEntityAssociation Slots Name Cardinality and Range Description Inheritance term 0..1 CellularAnatomicalEntityTermObject The ontology term that describes the nature of the association TermAssociation type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association Usages used by used in type used Activity occurs_in range CellularAnatomicalEntityAssociation Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:CellularAnatomicalEntityAssociation native gocam:CellularAnatomicalEntityAssociation LinkML Source Direct name: CellularAnatomicalEntityAssociation description: An association between an activity and a cellular anatomical entity term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: CellularAnatomicalEntityTermObject part_of: name: part_of range: CellTypeAssociation Induced name: CellularAnatomicalEntityAssociation description: An association between an activity and a cellular anatomical entity term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: CellularAnatomicalEntityTermObject part_of: name: part_of range: CellTypeAssociation attributes: term: name: term description: The ontology term that describes the nature of the association from_schema: https://w3id.org/gocam alias: term owner: CellularAnatomicalEntityAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: CellularAnatomicalEntityTermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: CellularAnatomicalEntityAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: CellularAnatomicalEntityAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: CellularAnatomicalEntityAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Class: CellularAnatomicalEntityAssociation"},{"location":"CellularAnatomicalEntityAssociation/#class-cellularanatomicalentityassociation","text":"An association between an activity and a cellular anatomical entity term URI: gocam:CellularAnatomicalEntityAssociation classDiagram class CellularAnatomicalEntityAssociation click CellularAnatomicalEntityAssociation href \"../CellularAnatomicalEntityAssociation\" TermAssociation <|-- CellularAnatomicalEntityAssociation click TermAssociation href \"../TermAssociation\" CellularAnatomicalEntityAssociation : evidence CellularAnatomicalEntityAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" CellularAnatomicalEntityAssociation : provenances CellularAnatomicalEntityAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" CellularAnatomicalEntityAssociation : term CellularAnatomicalEntityAssociation --> \"0..1\" CellularAnatomicalEntityTermObject : term click CellularAnatomicalEntityTermObject href \"../CellularAnatomicalEntityTermObject\" CellularAnatomicalEntityAssociation : type","title":"Class: CellularAnatomicalEntityAssociation"},{"location":"CellularAnatomicalEntityAssociation/#inheritance","text":"Association TermAssociation CellularAnatomicalEntityAssociation","title":"Inheritance"},{"location":"CellularAnatomicalEntityAssociation/#slots","text":"Name Cardinality and Range Description Inheritance term 0..1 CellularAnatomicalEntityTermObject The ontology term that describes the nature of the association TermAssociation type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association","title":"Slots"},{"location":"CellularAnatomicalEntityAssociation/#usages","text":"used by used in type used Activity occurs_in range CellularAnatomicalEntityAssociation","title":"Usages"},{"location":"CellularAnatomicalEntityAssociation/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"CellularAnatomicalEntityAssociation/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"CellularAnatomicalEntityAssociation/#mappings","text":"Mapping Type Mapped Value self gocam:CellularAnatomicalEntityAssociation native gocam:CellularAnatomicalEntityAssociation","title":"Mappings"},{"location":"CellularAnatomicalEntityAssociation/#linkml-source","text":"","title":"LinkML Source"},{"location":"CellularAnatomicalEntityAssociation/#direct","text":"name: CellularAnatomicalEntityAssociation description: An association between an activity and a cellular anatomical entity term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: CellularAnatomicalEntityTermObject part_of: name: part_of range: CellTypeAssociation","title":"Direct"},{"location":"CellularAnatomicalEntityAssociation/#induced","text":"name: CellularAnatomicalEntityAssociation description: An association between an activity and a cellular anatomical entity term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: CellularAnatomicalEntityTermObject part_of: name: part_of range: CellTypeAssociation attributes: term: name: term description: The ontology term that describes the nature of the association from_schema: https://w3id.org/gocam alias: term owner: CellularAnatomicalEntityAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: CellularAnatomicalEntityTermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: CellularAnatomicalEntityAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: CellularAnatomicalEntityAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: CellularAnatomicalEntityAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Induced"},{"location":"CellularAnatomicalEntityTermObject/","text":"Class: CellularAnatomicalEntityTermObject A term object that represents a cellular anatomical entity term from GO URI: gocam:CellularAnatomicalEntityTermObject classDiagram class CellularAnatomicalEntityTermObject click CellularAnatomicalEntityTermObject href \"../CellularAnatomicalEntityTermObject\" TermObject <|-- CellularAnatomicalEntityTermObject click TermObject href \"../TermObject\" CellularAnatomicalEntityTermObject : id CellularAnatomicalEntityTermObject : label CellularAnatomicalEntityTermObject : obsolete CellularAnatomicalEntityTermObject : type Inheritance Object TermObject CellularAnatomicalEntityTermObject Slots Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object Usages used by used in type used CellularAnatomicalEntityAssociation term range CellularAnatomicalEntityTermObject Identifier and Mapping Information Valid ID Prefixes Instances of this class should have identifiers with one of the following prefixes: GO Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:CellularAnatomicalEntityTermObject native gocam:CellularAnatomicalEntityTermObject LinkML Source Direct name: CellularAnatomicalEntityTermObject id_prefixes: - GO description: A term object that represents a cellular anatomical entity term from GO from_schema: https://w3id.org/gocam is_a: TermObject Induced name: CellularAnatomicalEntityTermObject id_prefixes: - GO description: A term object that represents a cellular anatomical entity term from GO from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: CellularAnatomicalEntityTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: CellularAnatomicalEntityTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: CellularAnatomicalEntityTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: CellularAnatomicalEntityTermObject domain_of: - Object range: boolean","title":"Class: CellularAnatomicalEntityTermObject"},{"location":"CellularAnatomicalEntityTermObject/#class-cellularanatomicalentitytermobject","text":"A term object that represents a cellular anatomical entity term from GO URI: gocam:CellularAnatomicalEntityTermObject classDiagram class CellularAnatomicalEntityTermObject click CellularAnatomicalEntityTermObject href \"../CellularAnatomicalEntityTermObject\" TermObject <|-- CellularAnatomicalEntityTermObject click TermObject href \"../TermObject\" CellularAnatomicalEntityTermObject : id CellularAnatomicalEntityTermObject : label CellularAnatomicalEntityTermObject : obsolete CellularAnatomicalEntityTermObject : type","title":"Class: CellularAnatomicalEntityTermObject"},{"location":"CellularAnatomicalEntityTermObject/#inheritance","text":"Object TermObject CellularAnatomicalEntityTermObject","title":"Inheritance"},{"location":"CellularAnatomicalEntityTermObject/#slots","text":"Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object","title":"Slots"},{"location":"CellularAnatomicalEntityTermObject/#usages","text":"used by used in type used CellularAnatomicalEntityAssociation term range CellularAnatomicalEntityTermObject","title":"Usages"},{"location":"CellularAnatomicalEntityTermObject/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"CellularAnatomicalEntityTermObject/#valid-id-prefixes","text":"Instances of this class should have identifiers with one of the following prefixes: GO","title":"Valid ID Prefixes"},{"location":"CellularAnatomicalEntityTermObject/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"CellularAnatomicalEntityTermObject/#mappings","text":"Mapping Type Mapped Value self gocam:CellularAnatomicalEntityTermObject native gocam:CellularAnatomicalEntityTermObject","title":"Mappings"},{"location":"CellularAnatomicalEntityTermObject/#linkml-source","text":"","title":"LinkML Source"},{"location":"CellularAnatomicalEntityTermObject/#direct","text":"name: CellularAnatomicalEntityTermObject id_prefixes: - GO description: A term object that represents a cellular anatomical entity term from GO from_schema: https://w3id.org/gocam is_a: TermObject","title":"Direct"},{"location":"CellularAnatomicalEntityTermObject/#induced","text":"name: CellularAnatomicalEntityTermObject id_prefixes: - GO description: A term object that represents a cellular anatomical entity term from GO from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: CellularAnatomicalEntityTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: CellularAnatomicalEntityTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: CellularAnatomicalEntityTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: CellularAnatomicalEntityTermObject domain_of: - Object range: boolean","title":"Induced"},{"location":"Curie/","text":"Type: Curie a compact URI URI: xsd:string base : Curie uri : xsd:string repr : str Comments in RDF serializations this MUST be expanded to a URI in non-RDF serializations MAY be serialized as the compact representation Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam","title":"Type: Curie"},{"location":"Curie/#type-curie","text":"a compact URI URI: xsd:string base : Curie uri : xsd:string repr : str","title":"Type: Curie"},{"location":"Curie/#comments","text":"in RDF serializations this MUST be expanded to a URI in non-RDF serializations MAY be serialized as the compact representation","title":"Comments"},{"location":"Curie/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Curie/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"Date/","text":"Type: Date a date (year, month and day) in an idealized calendar URI: xsd:date base : XSDDate uri : xsd:date repr : str Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam","title":"Type: Date"},{"location":"Date/#type-date","text":"a date (year, month and day) in an idealized calendar URI: xsd:date base : XSDDate uri : xsd:date repr : str","title":"Type: Date"},{"location":"Date/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Date/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"DateOrDatetime/","text":"Type: DateOrDatetime Either a date or a datetime URI: linkml:DateOrDatetime base : str uri : linkml:DateOrDatetime repr : str Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam","title":"Type: DateOrDatetime"},{"location":"DateOrDatetime/#type-dateordatetime","text":"Either a date or a datetime URI: linkml:DateOrDatetime base : str uri : linkml:DateOrDatetime repr : str","title":"Type: DateOrDatetime"},{"location":"DateOrDatetime/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"DateOrDatetime/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"Datetime/","text":"Type: Datetime The combination of a date and time URI: xsd:dateTime base : XSDDateTime uri : xsd:dateTime repr : str Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam","title":"Type: Datetime"},{"location":"Datetime/#type-datetime","text":"The combination of a date and time URI: xsd:dateTime base : XSDDateTime uri : xsd:dateTime repr : str","title":"Type: Datetime"},{"location":"Datetime/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Datetime/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"Decimal/","text":"Type: Decimal A real number with arbitrary precision that conforms to the xsd:decimal specification URI: xsd:decimal base : Decimal uri : xsd:decimal Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam","title":"Type: Decimal"},{"location":"Decimal/#type-decimal","text":"A real number with arbitrary precision that conforms to the xsd:decimal specification URI: xsd:decimal base : Decimal uri : xsd:decimal","title":"Type: Decimal"},{"location":"Decimal/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Decimal/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"Double/","text":"Type: Double A real number that conforms to the xsd:double specification URI: xsd:double base : float uri : xsd:double Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam","title":"Type: Double"},{"location":"Double/#type-double","text":"A real number that conforms to the xsd:double specification URI: xsd:double base : float uri : xsd:double","title":"Type: Double"},{"location":"Double/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Double/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"EnabledByAssociation/","text":"Class: EnabledByAssociation An association between an activity and the gene product or complex that carries it out NOTE : this is an abstract class and should not be instantiated directly URI: gocam:EnabledByAssociation classDiagram class EnabledByAssociation click EnabledByAssociation href \"../EnabledByAssociation\" Association <|-- EnabledByAssociation click Association href \"../Association\" EnabledByAssociation <|-- EnabledByGeneProductAssociation click EnabledByGeneProductAssociation href \"../EnabledByGeneProductAssociation\" EnabledByAssociation <|-- EnabledByProteinComplexAssociation click EnabledByProteinComplexAssociation href \"../EnabledByProteinComplexAssociation\" EnabledByAssociation : evidence EnabledByAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" EnabledByAssociation : provenances EnabledByAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" EnabledByAssociation : term EnabledByAssociation --> \"0..1\" InformationBiomacromoleculeTermObject : term click InformationBiomacromoleculeTermObject href \"../InformationBiomacromoleculeTermObject\" EnabledByAssociation : type Inheritance Association EnabledByAssociation EnabledByGeneProductAssociation EnabledByProteinComplexAssociation Slots Name Cardinality and Range Description Inheritance term 0..1 InformationBiomacromoleculeTermObject The gene product or complex that carries out the activity direct type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association Usages used by used in type used Activity enabled_by range EnabledByAssociation Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:EnabledByAssociation native gocam:EnabledByAssociation LinkML Source Direct name: EnabledByAssociation description: An association between an activity and the gene product or complex that carries it out from_schema: https://w3id.org/gocam is_a: Association abstract: true attributes: term: name: term description: The gene product or complex that carries out the activity from_schema: https://w3id.org/gocam domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: InformationBiomacromoleculeTermObject Induced name: EnabledByAssociation description: An association between an activity and the gene product or complex that carries it out from_schema: https://w3id.org/gocam is_a: Association abstract: true attributes: term: name: term description: The gene product or complex that carries out the activity from_schema: https://w3id.org/gocam alias: term owner: EnabledByAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: InformationBiomacromoleculeTermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: EnabledByAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: EnabledByAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: EnabledByAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Class: EnabledByAssociation"},{"location":"EnabledByAssociation/#class-enabledbyassociation","text":"An association between an activity and the gene product or complex that carries it out NOTE : this is an abstract class and should not be instantiated directly URI: gocam:EnabledByAssociation classDiagram class EnabledByAssociation click EnabledByAssociation href \"../EnabledByAssociation\" Association <|-- EnabledByAssociation click Association href \"../Association\" EnabledByAssociation <|-- EnabledByGeneProductAssociation click EnabledByGeneProductAssociation href \"../EnabledByGeneProductAssociation\" EnabledByAssociation <|-- EnabledByProteinComplexAssociation click EnabledByProteinComplexAssociation href \"../EnabledByProteinComplexAssociation\" EnabledByAssociation : evidence EnabledByAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" EnabledByAssociation : provenances EnabledByAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" EnabledByAssociation : term EnabledByAssociation --> \"0..1\" InformationBiomacromoleculeTermObject : term click InformationBiomacromoleculeTermObject href \"../InformationBiomacromoleculeTermObject\" EnabledByAssociation : type","title":"Class: EnabledByAssociation"},{"location":"EnabledByAssociation/#inheritance","text":"Association EnabledByAssociation EnabledByGeneProductAssociation EnabledByProteinComplexAssociation","title":"Inheritance"},{"location":"EnabledByAssociation/#slots","text":"Name Cardinality and Range Description Inheritance term 0..1 InformationBiomacromoleculeTermObject The gene product or complex that carries out the activity direct type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association","title":"Slots"},{"location":"EnabledByAssociation/#usages","text":"used by used in type used Activity enabled_by range EnabledByAssociation","title":"Usages"},{"location":"EnabledByAssociation/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"EnabledByAssociation/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"EnabledByAssociation/#mappings","text":"Mapping Type Mapped Value self gocam:EnabledByAssociation native gocam:EnabledByAssociation","title":"Mappings"},{"location":"EnabledByAssociation/#linkml-source","text":"","title":"LinkML Source"},{"location":"EnabledByAssociation/#direct","text":"name: EnabledByAssociation description: An association between an activity and the gene product or complex that carries it out from_schema: https://w3id.org/gocam is_a: Association abstract: true attributes: term: name: term description: The gene product or complex that carries out the activity from_schema: https://w3id.org/gocam domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: InformationBiomacromoleculeTermObject","title":"Direct"},{"location":"EnabledByAssociation/#induced","text":"name: EnabledByAssociation description: An association between an activity and the gene product or complex that carries it out from_schema: https://w3id.org/gocam is_a: Association abstract: true attributes: term: name: term description: The gene product or complex that carries out the activity from_schema: https://w3id.org/gocam alias: term owner: EnabledByAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: InformationBiomacromoleculeTermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: EnabledByAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: EnabledByAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: EnabledByAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Induced"},{"location":"EnabledByGeneProductAssociation/","text":"Class: EnabledByGeneProductAssociation An association between an activity and a gene product URI: gocam:EnabledByGeneProductAssociation classDiagram class EnabledByGeneProductAssociation click EnabledByGeneProductAssociation href \"../EnabledByGeneProductAssociation\" EnabledByAssociation <|-- EnabledByGeneProductAssociation click EnabledByAssociation href \"../EnabledByAssociation\" EnabledByGeneProductAssociation : evidence EnabledByGeneProductAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" EnabledByGeneProductAssociation : provenances EnabledByGeneProductAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" EnabledByGeneProductAssociation : term EnabledByGeneProductAssociation --> \"0..1\" GeneProductTermObject : term click GeneProductTermObject href \"../GeneProductTermObject\" EnabledByGeneProductAssociation : type Inheritance Association EnabledByAssociation EnabledByGeneProductAssociation Slots Name Cardinality and Range Description Inheritance term 0..1 GeneProductTermObject The gene product or complex that carries out the activity EnabledByAssociation type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:EnabledByGeneProductAssociation native gocam:EnabledByGeneProductAssociation LinkML Source Direct name: EnabledByGeneProductAssociation description: An association between an activity and a gene product from_schema: https://w3id.org/gocam is_a: EnabledByAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: GeneProductTermObject Induced name: EnabledByGeneProductAssociation description: An association between an activity and a gene product from_schema: https://w3id.org/gocam is_a: EnabledByAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: GeneProductTermObject attributes: term: name: term description: The gene product or complex that carries out the activity from_schema: https://w3id.org/gocam alias: term owner: EnabledByGeneProductAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: GeneProductTermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: EnabledByGeneProductAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: EnabledByGeneProductAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: EnabledByGeneProductAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Class: EnabledByGeneProductAssociation"},{"location":"EnabledByGeneProductAssociation/#class-enabledbygeneproductassociation","text":"An association between an activity and a gene product URI: gocam:EnabledByGeneProductAssociation classDiagram class EnabledByGeneProductAssociation click EnabledByGeneProductAssociation href \"../EnabledByGeneProductAssociation\" EnabledByAssociation <|-- EnabledByGeneProductAssociation click EnabledByAssociation href \"../EnabledByAssociation\" EnabledByGeneProductAssociation : evidence EnabledByGeneProductAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" EnabledByGeneProductAssociation : provenances EnabledByGeneProductAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" EnabledByGeneProductAssociation : term EnabledByGeneProductAssociation --> \"0..1\" GeneProductTermObject : term click GeneProductTermObject href \"../GeneProductTermObject\" EnabledByGeneProductAssociation : type","title":"Class: EnabledByGeneProductAssociation"},{"location":"EnabledByGeneProductAssociation/#inheritance","text":"Association EnabledByAssociation EnabledByGeneProductAssociation","title":"Inheritance"},{"location":"EnabledByGeneProductAssociation/#slots","text":"Name Cardinality and Range Description Inheritance term 0..1 GeneProductTermObject The gene product or complex that carries out the activity EnabledByAssociation type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association","title":"Slots"},{"location":"EnabledByGeneProductAssociation/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"EnabledByGeneProductAssociation/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"EnabledByGeneProductAssociation/#mappings","text":"Mapping Type Mapped Value self gocam:EnabledByGeneProductAssociation native gocam:EnabledByGeneProductAssociation","title":"Mappings"},{"location":"EnabledByGeneProductAssociation/#linkml-source","text":"","title":"LinkML Source"},{"location":"EnabledByGeneProductAssociation/#direct","text":"name: EnabledByGeneProductAssociation description: An association between an activity and a gene product from_schema: https://w3id.org/gocam is_a: EnabledByAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: GeneProductTermObject","title":"Direct"},{"location":"EnabledByGeneProductAssociation/#induced","text":"name: EnabledByGeneProductAssociation description: An association between an activity and a gene product from_schema: https://w3id.org/gocam is_a: EnabledByAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: GeneProductTermObject attributes: term: name: term description: The gene product or complex that carries out the activity from_schema: https://w3id.org/gocam alias: term owner: EnabledByGeneProductAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: GeneProductTermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: EnabledByGeneProductAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: EnabledByGeneProductAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: EnabledByGeneProductAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Induced"},{"location":"EnabledByProteinComplexAssociation/","text":"Class: EnabledByProteinComplexAssociation An association between an activity and a protein complex URI: gocam:EnabledByProteinComplexAssociation classDiagram class EnabledByProteinComplexAssociation click EnabledByProteinComplexAssociation href \"../EnabledByProteinComplexAssociation\" EnabledByAssociation <|-- EnabledByProteinComplexAssociation click EnabledByAssociation href \"../EnabledByAssociation\" EnabledByProteinComplexAssociation : evidence EnabledByProteinComplexAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" EnabledByProteinComplexAssociation : members EnabledByProteinComplexAssociation --> \"*\" GeneProductTermObject : members click GeneProductTermObject href \"../GeneProductTermObject\" EnabledByProteinComplexAssociation : provenances EnabledByProteinComplexAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" EnabledByProteinComplexAssociation : term EnabledByProteinComplexAssociation --> \"0..1\" ProteinComplexTermObject : term click ProteinComplexTermObject href \"../ProteinComplexTermObject\" EnabledByProteinComplexAssociation : type Inheritance Association EnabledByAssociation EnabledByProteinComplexAssociation Slots Name Cardinality and Range Description Inheritance members * GeneProductTermObject The gene products that are part of the complex direct term 0..1 ProteinComplexTermObject The gene product or complex that carries out the activity EnabledByAssociation type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:EnabledByProteinComplexAssociation native gocam:EnabledByProteinComplexAssociation LinkML Source Direct name: EnabledByProteinComplexAssociation description: An association between an activity and a protein complex from_schema: https://w3id.org/gocam is_a: EnabledByAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: ProteinComplexTermObject attributes: members: name: members description: The gene products that are part of the complex from_schema: https://w3id.org/gocam rank: 1000 multivalued: true domain_of: - EnabledByProteinComplexAssociation range: GeneProductTermObject Induced name: EnabledByProteinComplexAssociation description: An association between an activity and a protein complex from_schema: https://w3id.org/gocam is_a: EnabledByAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: ProteinComplexTermObject attributes: members: name: members description: The gene products that are part of the complex from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: members owner: EnabledByProteinComplexAssociation domain_of: - EnabledByProteinComplexAssociation range: GeneProductTermObject term: name: term description: The gene product or complex that carries out the activity from_schema: https://w3id.org/gocam alias: term owner: EnabledByProteinComplexAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: ProteinComplexTermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: EnabledByProteinComplexAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: EnabledByProteinComplexAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: EnabledByProteinComplexAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Class: EnabledByProteinComplexAssociation"},{"location":"EnabledByProteinComplexAssociation/#class-enabledbyproteincomplexassociation","text":"An association between an activity and a protein complex URI: gocam:EnabledByProteinComplexAssociation classDiagram class EnabledByProteinComplexAssociation click EnabledByProteinComplexAssociation href \"../EnabledByProteinComplexAssociation\" EnabledByAssociation <|-- EnabledByProteinComplexAssociation click EnabledByAssociation href \"../EnabledByAssociation\" EnabledByProteinComplexAssociation : evidence EnabledByProteinComplexAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" EnabledByProteinComplexAssociation : members EnabledByProteinComplexAssociation --> \"*\" GeneProductTermObject : members click GeneProductTermObject href \"../GeneProductTermObject\" EnabledByProteinComplexAssociation : provenances EnabledByProteinComplexAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" EnabledByProteinComplexAssociation : term EnabledByProteinComplexAssociation --> \"0..1\" ProteinComplexTermObject : term click ProteinComplexTermObject href \"../ProteinComplexTermObject\" EnabledByProteinComplexAssociation : type","title":"Class: EnabledByProteinComplexAssociation"},{"location":"EnabledByProteinComplexAssociation/#inheritance","text":"Association EnabledByAssociation EnabledByProteinComplexAssociation","title":"Inheritance"},{"location":"EnabledByProteinComplexAssociation/#slots","text":"Name Cardinality and Range Description Inheritance members * GeneProductTermObject The gene products that are part of the complex direct term 0..1 ProteinComplexTermObject The gene product or complex that carries out the activity EnabledByAssociation type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association","title":"Slots"},{"location":"EnabledByProteinComplexAssociation/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"EnabledByProteinComplexAssociation/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"EnabledByProteinComplexAssociation/#mappings","text":"Mapping Type Mapped Value self gocam:EnabledByProteinComplexAssociation native gocam:EnabledByProteinComplexAssociation","title":"Mappings"},{"location":"EnabledByProteinComplexAssociation/#linkml-source","text":"","title":"LinkML Source"},{"location":"EnabledByProteinComplexAssociation/#direct","text":"name: EnabledByProteinComplexAssociation description: An association between an activity and a protein complex from_schema: https://w3id.org/gocam is_a: EnabledByAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: ProteinComplexTermObject attributes: members: name: members description: The gene products that are part of the complex from_schema: https://w3id.org/gocam rank: 1000 multivalued: true domain_of: - EnabledByProteinComplexAssociation range: GeneProductTermObject","title":"Direct"},{"location":"EnabledByProteinComplexAssociation/#induced","text":"name: EnabledByProteinComplexAssociation description: An association between an activity and a protein complex from_schema: https://w3id.org/gocam is_a: EnabledByAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: ProteinComplexTermObject attributes: members: name: members description: The gene products that are part of the complex from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: members owner: EnabledByProteinComplexAssociation domain_of: - EnabledByProteinComplexAssociation range: GeneProductTermObject term: name: term description: The gene product or complex that carries out the activity from_schema: https://w3id.org/gocam alias: term owner: EnabledByProteinComplexAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: ProteinComplexTermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: EnabledByProteinComplexAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: EnabledByProteinComplexAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: EnabledByProteinComplexAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Induced"},{"location":"EvidenceItem/","text":"Class: EvidenceItem An individual piece of evidence that is associated with an assertion in a model URI: gocam:EvidenceItem classDiagram class EvidenceItem click EvidenceItem href \"../EvidenceItem\" EvidenceItem : provenances EvidenceItem --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" EvidenceItem : reference EvidenceItem --> \"0..1\" PublicationObject : reference click PublicationObject href \"../PublicationObject\" EvidenceItem : term EvidenceItem --> \"0..1\" EvidenceTermObject : term click EvidenceTermObject href \"../EvidenceTermObject\" EvidenceItem : with_objects EvidenceItem --> \"*\" Object : with_objects click Object href \"../Object\" Slots Name Cardinality and Range Description Inheritance term 0..1 EvidenceTermObject The ECO term representing the type of evidence direct reference 0..1 PublicationObject The publication of reference that describes the evidence direct with_objects * Object Supporting database entities or terms direct provenances * ProvenanceInfo Provenance about the assertion, e direct Usages used by used in type used Association evidence range EvidenceItem EnabledByAssociation evidence range EvidenceItem EnabledByGeneProductAssociation evidence range EvidenceItem EnabledByProteinComplexAssociation evidence range EvidenceItem CausalAssociation evidence range EvidenceItem TermAssociation evidence range EvidenceItem MolecularFunctionAssociation evidence range EvidenceItem BiologicalProcessAssociation evidence range EvidenceItem CellularAnatomicalEntityAssociation evidence range EvidenceItem CellTypeAssociation evidence range EvidenceItem GrossAnatomyAssociation evidence range EvidenceItem MoleculeAssociation evidence range EvidenceItem Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:EvidenceItem native gocam:EvidenceItem LinkML Source Direct name: EvidenceItem description: An individual piece of evidence that is associated with an assertion in a model from_schema: https://w3id.org/gocam attributes: term: name: term description: The ECO term representing the type of evidence from_schema: https://w3id.org/gocam rank: 1000 domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: EvidenceTermObject reference: name: reference description: The publication of reference that describes the evidence from_schema: https://w3id.org/gocam rank: 1000 domain_of: - EvidenceItem range: PublicationObject with_objects: name: with_objects description: Supporting database entities or terms from_schema: https://w3id.org/gocam aliases: - with - with/from rank: 1000 multivalued: true domain_of: - EvidenceItem range: Object provenances: name: provenances description: Provenance about the assertion, e.g. who made it from_schema: https://w3id.org/gocam multivalued: true domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true Induced name: EvidenceItem description: An individual piece of evidence that is associated with an assertion in a model from_schema: https://w3id.org/gocam attributes: term: name: term description: The ECO term representing the type of evidence from_schema: https://w3id.org/gocam rank: 1000 alias: term owner: EvidenceItem domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: EvidenceTermObject reference: name: reference description: The publication of reference that describes the evidence from_schema: https://w3id.org/gocam rank: 1000 alias: reference owner: EvidenceItem domain_of: - EvidenceItem range: PublicationObject with_objects: name: with_objects description: Supporting database entities or terms from_schema: https://w3id.org/gocam aliases: - with - with/from rank: 1000 multivalued: true alias: with_objects owner: EvidenceItem domain_of: - EvidenceItem range: Object provenances: name: provenances description: Provenance about the assertion, e.g. who made it from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: EvidenceItem domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Class: EvidenceItem"},{"location":"EvidenceItem/#class-evidenceitem","text":"An individual piece of evidence that is associated with an assertion in a model URI: gocam:EvidenceItem classDiagram class EvidenceItem click EvidenceItem href \"../EvidenceItem\" EvidenceItem : provenances EvidenceItem --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" EvidenceItem : reference EvidenceItem --> \"0..1\" PublicationObject : reference click PublicationObject href \"../PublicationObject\" EvidenceItem : term EvidenceItem --> \"0..1\" EvidenceTermObject : term click EvidenceTermObject href \"../EvidenceTermObject\" EvidenceItem : with_objects EvidenceItem --> \"*\" Object : with_objects click Object href \"../Object\"","title":"Class: EvidenceItem"},{"location":"EvidenceItem/#slots","text":"Name Cardinality and Range Description Inheritance term 0..1 EvidenceTermObject The ECO term representing the type of evidence direct reference 0..1 PublicationObject The publication of reference that describes the evidence direct with_objects * Object Supporting database entities or terms direct provenances * ProvenanceInfo Provenance about the assertion, e direct","title":"Slots"},{"location":"EvidenceItem/#usages","text":"used by used in type used Association evidence range EvidenceItem EnabledByAssociation evidence range EvidenceItem EnabledByGeneProductAssociation evidence range EvidenceItem EnabledByProteinComplexAssociation evidence range EvidenceItem CausalAssociation evidence range EvidenceItem TermAssociation evidence range EvidenceItem MolecularFunctionAssociation evidence range EvidenceItem BiologicalProcessAssociation evidence range EvidenceItem CellularAnatomicalEntityAssociation evidence range EvidenceItem CellTypeAssociation evidence range EvidenceItem GrossAnatomyAssociation evidence range EvidenceItem MoleculeAssociation evidence range EvidenceItem","title":"Usages"},{"location":"EvidenceItem/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"EvidenceItem/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"EvidenceItem/#mappings","text":"Mapping Type Mapped Value self gocam:EvidenceItem native gocam:EvidenceItem","title":"Mappings"},{"location":"EvidenceItem/#linkml-source","text":"","title":"LinkML Source"},{"location":"EvidenceItem/#direct","text":"name: EvidenceItem description: An individual piece of evidence that is associated with an assertion in a model from_schema: https://w3id.org/gocam attributes: term: name: term description: The ECO term representing the type of evidence from_schema: https://w3id.org/gocam rank: 1000 domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: EvidenceTermObject reference: name: reference description: The publication of reference that describes the evidence from_schema: https://w3id.org/gocam rank: 1000 domain_of: - EvidenceItem range: PublicationObject with_objects: name: with_objects description: Supporting database entities or terms from_schema: https://w3id.org/gocam aliases: - with - with/from rank: 1000 multivalued: true domain_of: - EvidenceItem range: Object provenances: name: provenances description: Provenance about the assertion, e.g. who made it from_schema: https://w3id.org/gocam multivalued: true domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Direct"},{"location":"EvidenceItem/#induced","text":"name: EvidenceItem description: An individual piece of evidence that is associated with an assertion in a model from_schema: https://w3id.org/gocam attributes: term: name: term description: The ECO term representing the type of evidence from_schema: https://w3id.org/gocam rank: 1000 alias: term owner: EvidenceItem domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: EvidenceTermObject reference: name: reference description: The publication of reference that describes the evidence from_schema: https://w3id.org/gocam rank: 1000 alias: reference owner: EvidenceItem domain_of: - EvidenceItem range: PublicationObject with_objects: name: with_objects description: Supporting database entities or terms from_schema: https://w3id.org/gocam aliases: - with - with/from rank: 1000 multivalued: true alias: with_objects owner: EvidenceItem domain_of: - EvidenceItem range: Object provenances: name: provenances description: Provenance about the assertion, e.g. who made it from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: EvidenceItem domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Induced"},{"location":"EvidenceTermObject/","text":"Class: EvidenceTermObject A term object that represents an evidence term from ECO URI: gocam:EvidenceTermObject classDiagram class EvidenceTermObject click EvidenceTermObject href \"../EvidenceTermObject\" TermObject <|-- EvidenceTermObject click TermObject href \"../TermObject\" EvidenceTermObject : id EvidenceTermObject : label EvidenceTermObject : obsolete EvidenceTermObject : type Inheritance Object TermObject EvidenceTermObject Slots Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object Usages used by used in type used EvidenceItem term range EvidenceTermObject Identifier and Mapping Information Valid ID Prefixes Instances of this class should have identifiers with one of the following prefixes: ECO Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:EvidenceTermObject native gocam:EvidenceTermObject LinkML Source Direct name: EvidenceTermObject id_prefixes: - ECO description: A term object that represents an evidence term from ECO from_schema: https://w3id.org/gocam is_a: TermObject Induced name: EvidenceTermObject id_prefixes: - ECO description: A term object that represents an evidence term from ECO from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: EvidenceTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: EvidenceTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: EvidenceTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: EvidenceTermObject domain_of: - Object range: boolean","title":"Class: EvidenceTermObject"},{"location":"EvidenceTermObject/#class-evidencetermobject","text":"A term object that represents an evidence term from ECO URI: gocam:EvidenceTermObject classDiagram class EvidenceTermObject click EvidenceTermObject href \"../EvidenceTermObject\" TermObject <|-- EvidenceTermObject click TermObject href \"../TermObject\" EvidenceTermObject : id EvidenceTermObject : label EvidenceTermObject : obsolete EvidenceTermObject : type","title":"Class: EvidenceTermObject"},{"location":"EvidenceTermObject/#inheritance","text":"Object TermObject EvidenceTermObject","title":"Inheritance"},{"location":"EvidenceTermObject/#slots","text":"Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object","title":"Slots"},{"location":"EvidenceTermObject/#usages","text":"used by used in type used EvidenceItem term range EvidenceTermObject","title":"Usages"},{"location":"EvidenceTermObject/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"EvidenceTermObject/#valid-id-prefixes","text":"Instances of this class should have identifiers with one of the following prefixes: ECO","title":"Valid ID Prefixes"},{"location":"EvidenceTermObject/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"EvidenceTermObject/#mappings","text":"Mapping Type Mapped Value self gocam:EvidenceTermObject native gocam:EvidenceTermObject","title":"Mappings"},{"location":"EvidenceTermObject/#linkml-source","text":"","title":"LinkML Source"},{"location":"EvidenceTermObject/#direct","text":"name: EvidenceTermObject id_prefixes: - ECO description: A term object that represents an evidence term from ECO from_schema: https://w3id.org/gocam is_a: TermObject","title":"Direct"},{"location":"EvidenceTermObject/#induced","text":"name: EvidenceTermObject id_prefixes: - ECO description: A term object that represents an evidence term from ECO from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: EvidenceTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: EvidenceTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: EvidenceTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: EvidenceTermObject domain_of: - Object range: boolean","title":"Induced"},{"location":"Float/","text":"Type: Float A real number that conforms to the xsd:float specification URI: xsd:float base : float uri : xsd:float Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam","title":"Type: Float"},{"location":"Float/#type-float","text":"A real number that conforms to the xsd:float specification URI: xsd:float base : float uri : xsd:float","title":"Type: Float"},{"location":"Float/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Float/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"GeneProductTermObject/","text":"Class: GeneProductTermObject A term object that represents a gene product term from GO or UniProtKB URI: gocam:GeneProductTermObject classDiagram class GeneProductTermObject click GeneProductTermObject href \"../GeneProductTermObject\" InformationBiomacromoleculeTermObject <|-- GeneProductTermObject click InformationBiomacromoleculeTermObject href \"../InformationBiomacromoleculeTermObject\" GeneProductTermObject : id GeneProductTermObject : label GeneProductTermObject : obsolete GeneProductTermObject : type Inheritance Object TermObject InformationBiomacromoleculeTermObject GeneProductTermObject Slots Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object Usages used by used in type used EnabledByGeneProductAssociation term range GeneProductTermObject EnabledByProteinComplexAssociation members range GeneProductTermObject Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:GeneProductTermObject native gocam:GeneProductTermObject LinkML Source Direct name: GeneProductTermObject description: A term object that represents a gene product term from GO or UniProtKB from_schema: https://w3id.org/gocam is_a: InformationBiomacromoleculeTermObject Induced name: GeneProductTermObject description: A term object that represents a gene product term from GO or UniProtKB from_schema: https://w3id.org/gocam is_a: InformationBiomacromoleculeTermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: GeneProductTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: GeneProductTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: GeneProductTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: GeneProductTermObject domain_of: - Object range: boolean","title":"Class: GeneProductTermObject"},{"location":"GeneProductTermObject/#class-geneproducttermobject","text":"A term object that represents a gene product term from GO or UniProtKB URI: gocam:GeneProductTermObject classDiagram class GeneProductTermObject click GeneProductTermObject href \"../GeneProductTermObject\" InformationBiomacromoleculeTermObject <|-- GeneProductTermObject click InformationBiomacromoleculeTermObject href \"../InformationBiomacromoleculeTermObject\" GeneProductTermObject : id GeneProductTermObject : label GeneProductTermObject : obsolete GeneProductTermObject : type","title":"Class: GeneProductTermObject"},{"location":"GeneProductTermObject/#inheritance","text":"Object TermObject InformationBiomacromoleculeTermObject GeneProductTermObject","title":"Inheritance"},{"location":"GeneProductTermObject/#slots","text":"Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object","title":"Slots"},{"location":"GeneProductTermObject/#usages","text":"used by used in type used EnabledByGeneProductAssociation term range GeneProductTermObject EnabledByProteinComplexAssociation members range GeneProductTermObject","title":"Usages"},{"location":"GeneProductTermObject/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"GeneProductTermObject/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"GeneProductTermObject/#mappings","text":"Mapping Type Mapped Value self gocam:GeneProductTermObject native gocam:GeneProductTermObject","title":"Mappings"},{"location":"GeneProductTermObject/#linkml-source","text":"","title":"LinkML Source"},{"location":"GeneProductTermObject/#direct","text":"name: GeneProductTermObject description: A term object that represents a gene product term from GO or UniProtKB from_schema: https://w3id.org/gocam is_a: InformationBiomacromoleculeTermObject","title":"Direct"},{"location":"GeneProductTermObject/#induced","text":"name: GeneProductTermObject description: A term object that represents a gene product term from GO or UniProtKB from_schema: https://w3id.org/gocam is_a: InformationBiomacromoleculeTermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: GeneProductTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: GeneProductTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: GeneProductTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: GeneProductTermObject domain_of: - Object range: boolean","title":"Induced"},{"location":"GrossAnatomicalStructureTermObject/","text":"Class: GrossAnatomicalStructureTermObject A term object that represents a gross anatomical structure term from UBERON URI: gocam:GrossAnatomicalStructureTermObject classDiagram class GrossAnatomicalStructureTermObject click GrossAnatomicalStructureTermObject href \"../GrossAnatomicalStructureTermObject\" TermObject <|-- GrossAnatomicalStructureTermObject click TermObject href \"../TermObject\" GrossAnatomicalStructureTermObject : id GrossAnatomicalStructureTermObject : label GrossAnatomicalStructureTermObject : obsolete GrossAnatomicalStructureTermObject : type Inheritance Object TermObject GrossAnatomicalStructureTermObject Slots Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object Usages used by used in type used GrossAnatomyAssociation term range GrossAnatomicalStructureTermObject Identifier and Mapping Information Valid ID Prefixes Instances of this class should have identifiers with one of the following prefixes: UBERON PO FAO DDANAT Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:GrossAnatomicalStructureTermObject native gocam:GrossAnatomicalStructureTermObject LinkML Source Direct name: GrossAnatomicalStructureTermObject id_prefixes: - UBERON - PO - FAO - DDANAT description: A term object that represents a gross anatomical structure term from UBERON from_schema: https://w3id.org/gocam is_a: TermObject Induced name: GrossAnatomicalStructureTermObject id_prefixes: - UBERON - PO - FAO - DDANAT description: A term object that represents a gross anatomical structure term from UBERON from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: GrossAnatomicalStructureTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: GrossAnatomicalStructureTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: GrossAnatomicalStructureTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: GrossAnatomicalStructureTermObject domain_of: - Object range: boolean","title":"Class: GrossAnatomicalStructureTermObject"},{"location":"GrossAnatomicalStructureTermObject/#class-grossanatomicalstructuretermobject","text":"A term object that represents a gross anatomical structure term from UBERON URI: gocam:GrossAnatomicalStructureTermObject classDiagram class GrossAnatomicalStructureTermObject click GrossAnatomicalStructureTermObject href \"../GrossAnatomicalStructureTermObject\" TermObject <|-- GrossAnatomicalStructureTermObject click TermObject href \"../TermObject\" GrossAnatomicalStructureTermObject : id GrossAnatomicalStructureTermObject : label GrossAnatomicalStructureTermObject : obsolete GrossAnatomicalStructureTermObject : type","title":"Class: GrossAnatomicalStructureTermObject"},{"location":"GrossAnatomicalStructureTermObject/#inheritance","text":"Object TermObject GrossAnatomicalStructureTermObject","title":"Inheritance"},{"location":"GrossAnatomicalStructureTermObject/#slots","text":"Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object","title":"Slots"},{"location":"GrossAnatomicalStructureTermObject/#usages","text":"used by used in type used GrossAnatomyAssociation term range GrossAnatomicalStructureTermObject","title":"Usages"},{"location":"GrossAnatomicalStructureTermObject/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"GrossAnatomicalStructureTermObject/#valid-id-prefixes","text":"Instances of this class should have identifiers with one of the following prefixes: UBERON PO FAO DDANAT","title":"Valid ID Prefixes"},{"location":"GrossAnatomicalStructureTermObject/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"GrossAnatomicalStructureTermObject/#mappings","text":"Mapping Type Mapped Value self gocam:GrossAnatomicalStructureTermObject native gocam:GrossAnatomicalStructureTermObject","title":"Mappings"},{"location":"GrossAnatomicalStructureTermObject/#linkml-source","text":"","title":"LinkML Source"},{"location":"GrossAnatomicalStructureTermObject/#direct","text":"name: GrossAnatomicalStructureTermObject id_prefixes: - UBERON - PO - FAO - DDANAT description: A term object that represents a gross anatomical structure term from UBERON from_schema: https://w3id.org/gocam is_a: TermObject","title":"Direct"},{"location":"GrossAnatomicalStructureTermObject/#induced","text":"name: GrossAnatomicalStructureTermObject id_prefixes: - UBERON - PO - FAO - DDANAT description: A term object that represents a gross anatomical structure term from UBERON from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: GrossAnatomicalStructureTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: GrossAnatomicalStructureTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: GrossAnatomicalStructureTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: GrossAnatomicalStructureTermObject domain_of: - Object range: boolean","title":"Induced"},{"location":"GrossAnatomyAssociation/","text":"Class: GrossAnatomyAssociation An association between an activity and a gross anatomical structure term URI: gocam:GrossAnatomyAssociation classDiagram class GrossAnatomyAssociation click GrossAnatomyAssociation href \"../GrossAnatomyAssociation\" TermAssociation <|-- GrossAnatomyAssociation click TermAssociation href \"../TermAssociation\" GrossAnatomyAssociation : evidence GrossAnatomyAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" GrossAnatomyAssociation : provenances GrossAnatomyAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" GrossAnatomyAssociation : term GrossAnatomyAssociation --> \"0..1\" GrossAnatomicalStructureTermObject : term click GrossAnatomicalStructureTermObject href \"../GrossAnatomicalStructureTermObject\" GrossAnatomyAssociation : type Inheritance Association TermAssociation GrossAnatomyAssociation Slots Name Cardinality and Range Description Inheritance term 0..1 GrossAnatomicalStructureTermObject The ontology term that describes the nature of the association TermAssociation type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:GrossAnatomyAssociation native gocam:GrossAnatomyAssociation LinkML Source Direct name: GrossAnatomyAssociation description: An association between an activity and a gross anatomical structure term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: GrossAnatomicalStructureTermObject part_of: name: part_of range: GrossAnatomyAssociation Induced name: GrossAnatomyAssociation description: An association between an activity and a gross anatomical structure term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: GrossAnatomicalStructureTermObject part_of: name: part_of range: GrossAnatomyAssociation attributes: term: name: term description: The ontology term that describes the nature of the association from_schema: https://w3id.org/gocam alias: term owner: GrossAnatomyAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: GrossAnatomicalStructureTermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: GrossAnatomyAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: GrossAnatomyAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: GrossAnatomyAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Class: GrossAnatomyAssociation"},{"location":"GrossAnatomyAssociation/#class-grossanatomyassociation","text":"An association between an activity and a gross anatomical structure term URI: gocam:GrossAnatomyAssociation classDiagram class GrossAnatomyAssociation click GrossAnatomyAssociation href \"../GrossAnatomyAssociation\" TermAssociation <|-- GrossAnatomyAssociation click TermAssociation href \"../TermAssociation\" GrossAnatomyAssociation : evidence GrossAnatomyAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" GrossAnatomyAssociation : provenances GrossAnatomyAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" GrossAnatomyAssociation : term GrossAnatomyAssociation --> \"0..1\" GrossAnatomicalStructureTermObject : term click GrossAnatomicalStructureTermObject href \"../GrossAnatomicalStructureTermObject\" GrossAnatomyAssociation : type","title":"Class: GrossAnatomyAssociation"},{"location":"GrossAnatomyAssociation/#inheritance","text":"Association TermAssociation GrossAnatomyAssociation","title":"Inheritance"},{"location":"GrossAnatomyAssociation/#slots","text":"Name Cardinality and Range Description Inheritance term 0..1 GrossAnatomicalStructureTermObject The ontology term that describes the nature of the association TermAssociation type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association","title":"Slots"},{"location":"GrossAnatomyAssociation/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"GrossAnatomyAssociation/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"GrossAnatomyAssociation/#mappings","text":"Mapping Type Mapped Value self gocam:GrossAnatomyAssociation native gocam:GrossAnatomyAssociation","title":"Mappings"},{"location":"GrossAnatomyAssociation/#linkml-source","text":"","title":"LinkML Source"},{"location":"GrossAnatomyAssociation/#direct","text":"name: GrossAnatomyAssociation description: An association between an activity and a gross anatomical structure term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: GrossAnatomicalStructureTermObject part_of: name: part_of range: GrossAnatomyAssociation","title":"Direct"},{"location":"GrossAnatomyAssociation/#induced","text":"name: GrossAnatomyAssociation description: An association between an activity and a gross anatomical structure term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: GrossAnatomicalStructureTermObject part_of: name: part_of range: GrossAnatomyAssociation attributes: term: name: term description: The ontology term that describes the nature of the association from_schema: https://w3id.org/gocam alias: term owner: GrossAnatomyAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: GrossAnatomicalStructureTermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: GrossAnatomyAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: GrossAnatomyAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: GrossAnatomyAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Induced"},{"location":"InformationBiomacromoleculeCategory/","text":"Enum: InformationBiomacromoleculeCategory URI: InformationBiomacromoleculeCategory Permissible Values Value Meaning Description GeneOrReferenceProtein biolink.GeneOrGeneProduct ProteinIsoform None MacromolecularComplex None Unknown None Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam LinkML Source name: InformationBiomacromoleculeCategory from_schema: https://w3id.org/gocam rank: 1000 permissible_values: GeneOrReferenceProtein: text: GeneOrReferenceProtein meaning: biolink.GeneOrGeneProduct ProteinIsoform: text: ProteinIsoform MacromolecularComplex: text: MacromolecularComplex Unknown: text: Unknown","title":"Enum: InformationBiomacromoleculeCategory"},{"location":"InformationBiomacromoleculeCategory/#enum-informationbiomacromoleculecategory","text":"URI: InformationBiomacromoleculeCategory","title":"Enum: InformationBiomacromoleculeCategory"},{"location":"InformationBiomacromoleculeCategory/#permissible-values","text":"Value Meaning Description GeneOrReferenceProtein biolink.GeneOrGeneProduct ProteinIsoform None MacromolecularComplex None Unknown None","title":"Permissible Values"},{"location":"InformationBiomacromoleculeCategory/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"InformationBiomacromoleculeCategory/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"InformationBiomacromoleculeCategory/#linkml-source","text":"name: InformationBiomacromoleculeCategory from_schema: https://w3id.org/gocam rank: 1000 permissible_values: GeneOrReferenceProtein: text: GeneOrReferenceProtein meaning: biolink.GeneOrGeneProduct ProteinIsoform: text: ProteinIsoform MacromolecularComplex: text: MacromolecularComplex Unknown: text: Unknown","title":"LinkML Source"},{"location":"InformationBiomacromoleculeTermObject/","text":"Class: InformationBiomacromoleculeTermObject An abstract class for all information biomacromolecule term objects NOTE : this is an abstract class and should not be instantiated directly URI: gocam:InformationBiomacromoleculeTermObject classDiagram class InformationBiomacromoleculeTermObject click InformationBiomacromoleculeTermObject href \"../InformationBiomacromoleculeTermObject\" TermObject <|-- InformationBiomacromoleculeTermObject click TermObject href \"../TermObject\" InformationBiomacromoleculeTermObject <|-- GeneProductTermObject click GeneProductTermObject href \"../GeneProductTermObject\" InformationBiomacromoleculeTermObject <|-- ProteinComplexTermObject click ProteinComplexTermObject href \"../ProteinComplexTermObject\" InformationBiomacromoleculeTermObject : id InformationBiomacromoleculeTermObject : label InformationBiomacromoleculeTermObject : obsolete InformationBiomacromoleculeTermObject : type Inheritance Object TermObject InformationBiomacromoleculeTermObject GeneProductTermObject ProteinComplexTermObject Slots Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object Usages used by used in type used EnabledByAssociation term range InformationBiomacromoleculeTermObject Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:InformationBiomacromoleculeTermObject native gocam:InformationBiomacromoleculeTermObject LinkML Source Direct name: InformationBiomacromoleculeTermObject description: An abstract class for all information biomacromolecule term objects from_schema: https://w3id.org/gocam is_a: TermObject abstract: true Induced name: InformationBiomacromoleculeTermObject description: An abstract class for all information biomacromolecule term objects from_schema: https://w3id.org/gocam is_a: TermObject abstract: true attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: InformationBiomacromoleculeTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: InformationBiomacromoleculeTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: InformationBiomacromoleculeTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: InformationBiomacromoleculeTermObject domain_of: - Object range: boolean","title":"Class: InformationBiomacromoleculeTermObject"},{"location":"InformationBiomacromoleculeTermObject/#class-informationbiomacromoleculetermobject","text":"An abstract class for all information biomacromolecule term objects NOTE : this is an abstract class and should not be instantiated directly URI: gocam:InformationBiomacromoleculeTermObject classDiagram class InformationBiomacromoleculeTermObject click InformationBiomacromoleculeTermObject href \"../InformationBiomacromoleculeTermObject\" TermObject <|-- InformationBiomacromoleculeTermObject click TermObject href \"../TermObject\" InformationBiomacromoleculeTermObject <|-- GeneProductTermObject click GeneProductTermObject href \"../GeneProductTermObject\" InformationBiomacromoleculeTermObject <|-- ProteinComplexTermObject click ProteinComplexTermObject href \"../ProteinComplexTermObject\" InformationBiomacromoleculeTermObject : id InformationBiomacromoleculeTermObject : label InformationBiomacromoleculeTermObject : obsolete InformationBiomacromoleculeTermObject : type","title":"Class: InformationBiomacromoleculeTermObject"},{"location":"InformationBiomacromoleculeTermObject/#inheritance","text":"Object TermObject InformationBiomacromoleculeTermObject GeneProductTermObject ProteinComplexTermObject","title":"Inheritance"},{"location":"InformationBiomacromoleculeTermObject/#slots","text":"Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object","title":"Slots"},{"location":"InformationBiomacromoleculeTermObject/#usages","text":"used by used in type used EnabledByAssociation term range InformationBiomacromoleculeTermObject","title":"Usages"},{"location":"InformationBiomacromoleculeTermObject/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"InformationBiomacromoleculeTermObject/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"InformationBiomacromoleculeTermObject/#mappings","text":"Mapping Type Mapped Value self gocam:InformationBiomacromoleculeTermObject native gocam:InformationBiomacromoleculeTermObject","title":"Mappings"},{"location":"InformationBiomacromoleculeTermObject/#linkml-source","text":"","title":"LinkML Source"},{"location":"InformationBiomacromoleculeTermObject/#direct","text":"name: InformationBiomacromoleculeTermObject description: An abstract class for all information biomacromolecule term objects from_schema: https://w3id.org/gocam is_a: TermObject abstract: true","title":"Direct"},{"location":"InformationBiomacromoleculeTermObject/#induced","text":"name: InformationBiomacromoleculeTermObject description: An abstract class for all information biomacromolecule term objects from_schema: https://w3id.org/gocam is_a: TermObject abstract: true attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: InformationBiomacromoleculeTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: InformationBiomacromoleculeTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: InformationBiomacromoleculeTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: InformationBiomacromoleculeTermObject domain_of: - Object range: boolean","title":"Induced"},{"location":"Integer/","text":"Type: Integer An integer URI: xsd:integer base : int uri : xsd:integer Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam","title":"Type: Integer"},{"location":"Integer/#type-integer","text":"An integer URI: xsd:integer base : int uri : xsd:integer","title":"Type: Integer"},{"location":"Integer/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Integer/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"Jsonpath/","text":"Type: Jsonpath A string encoding a JSON Path. The value of the string MUST conform to JSON Point syntax and SHOULD dereference to zero or more valid objects within the current instance document when encoded in tree form. URI: xsd:string base : str uri : xsd:string repr : str Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam","title":"Type: Jsonpath"},{"location":"Jsonpath/#type-jsonpath","text":"A string encoding a JSON Path. The value of the string MUST conform to JSON Point syntax and SHOULD dereference to zero or more valid objects within the current instance document when encoded in tree form. URI: xsd:string base : str uri : xsd:string repr : str","title":"Type: Jsonpath"},{"location":"Jsonpath/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Jsonpath/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"Jsonpointer/","text":"Type: Jsonpointer A string encoding a JSON Pointer. The value of the string MUST conform to JSON Point syntax and SHOULD dereference to a valid object within the current instance document when encoded in tree form. URI: xsd:string base : str uri : xsd:string repr : str Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam","title":"Type: Jsonpointer"},{"location":"Jsonpointer/#type-jsonpointer","text":"A string encoding a JSON Pointer. The value of the string MUST conform to JSON Point syntax and SHOULD dereference to a valid object within the current instance document when encoded in tree form. URI: xsd:string base : str uri : xsd:string repr : str","title":"Type: Jsonpointer"},{"location":"Jsonpointer/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Jsonpointer/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"Model/","text":"Class: Model A model of a biological program consisting of a set of causally connected activities URI: gocam:Model classDiagram class Model click Model href \"../Model\" Model : activities Model --> \"*\" Activity : activities click Activity href \"../Activity\" Model : comments Model : id Model : objects Model --> \"*\" Object : objects click Object href \"../Object\" Model : provenances Model --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" Model : status Model --> \"0..1\" ModelStateEnum : status click ModelStateEnum href \"../ModelStateEnum\" Model : taxon Model --> \"0..1\" TaxonTermObject : taxon click TaxonTermObject href \"../TaxonTermObject\" Model : title Slots Name Cardinality and Range Description Inheritance id 1 Uriorcurie The identifier of the model direct title 0..1 String The human-readable descriptive title of the model direct taxon 0..1 TaxonTermObject The primary taxon that the model is about direct status 0..1 ModelStateEnum The status of the model direct comments * String Comments about the model direct activities * Activity All of the activities that are part of the model direct objects * Object All of the objects that are part of the model direct provenances * ProvenanceInfo Model-level provenance information direct Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:Model native gocam:Model LinkML Source Direct name: Model description: A model of a biological program consisting of a set of causally connected activities from_schema: https://w3id.org/gocam attributes: id: name: id description: The identifier of the model. Should be in gocam namespace. from_schema: https://w3id.org/gocam rank: 1000 identifier: true domain_of: - Model - Activity - Object range: uriorcurie required: true title: name: title description: The human-readable descriptive title of the model from_schema: https://w3id.org/gocam rank: 1000 slot_uri: dct:title domain_of: - Model taxon: name: taxon description: The primary taxon that the model is about from_schema: https://w3id.org/gocam rank: 1000 domain_of: - Model range: TaxonTermObject status: name: status description: The status of the model from_schema: https://w3id.org/gocam aliases: - model state rank: 1000 slot_uri: pav:status domain_of: - Model range: ModelStateEnum comments: name: comments description: Comments about the model from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:comment multivalued: true domain_of: - Model activities: name: activities description: All of the activities that are part of the model from_schema: https://w3id.org/gocam rank: 1000 multivalued: true domain_of: - Model range: Activity inlined: true inlined_as_list: true objects: name: objects description: All of the objects that are part of the model. This includes terms as well as publications and database objects like gene. This is not strictly part of the data managed by the model, it is for convenience, and should be refreshed from outside. from_schema: https://w3id.org/gocam rank: 1000 multivalued: true domain_of: - Model range: Object inlined: true inlined_as_list: true provenances: name: provenances description: Model-level provenance information from_schema: https://w3id.org/gocam rank: 1000 multivalued: true domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true Induced name: Model description: A model of a biological program consisting of a set of causally connected activities from_schema: https://w3id.org/gocam attributes: id: name: id description: The identifier of the model. Should be in gocam namespace. from_schema: https://w3id.org/gocam rank: 1000 identifier: true alias: id owner: Model domain_of: - Model - Activity - Object range: uriorcurie title: name: title description: The human-readable descriptive title of the model from_schema: https://w3id.org/gocam rank: 1000 slot_uri: dct:title alias: title owner: Model domain_of: - Model range: string taxon: name: taxon description: The primary taxon that the model is about from_schema: https://w3id.org/gocam rank: 1000 alias: taxon owner: Model domain_of: - Model range: TaxonTermObject status: name: status description: The status of the model from_schema: https://w3id.org/gocam aliases: - model state rank: 1000 slot_uri: pav:status alias: status owner: Model domain_of: - Model range: ModelStateEnum comments: name: comments description: Comments about the model from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:comment multivalued: true alias: comments owner: Model domain_of: - Model range: string activities: name: activities description: All of the activities that are part of the model from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: activities owner: Model domain_of: - Model range: Activity inlined_as_list: true objects: name: objects description: All of the objects that are part of the model. This includes terms as well as publications and database objects like gene. This is not strictly part of the data managed by the model, it is for convenience, and should be refreshed from outside. from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: objects owner: Model domain_of: - Model range: Object inlined_as_list: true provenances: name: provenances description: Model-level provenance information from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: provenances owner: Model domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined_as_list: true","title":"Class: Model"},{"location":"Model/#class-model","text":"A model of a biological program consisting of a set of causally connected activities URI: gocam:Model classDiagram class Model click Model href \"../Model\" Model : activities Model --> \"*\" Activity : activities click Activity href \"../Activity\" Model : comments Model : id Model : objects Model --> \"*\" Object : objects click Object href \"../Object\" Model : provenances Model --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" Model : status Model --> \"0..1\" ModelStateEnum : status click ModelStateEnum href \"../ModelStateEnum\" Model : taxon Model --> \"0..1\" TaxonTermObject : taxon click TaxonTermObject href \"../TaxonTermObject\" Model : title","title":"Class: Model"},{"location":"Model/#slots","text":"Name Cardinality and Range Description Inheritance id 1 Uriorcurie The identifier of the model direct title 0..1 String The human-readable descriptive title of the model direct taxon 0..1 TaxonTermObject The primary taxon that the model is about direct status 0..1 ModelStateEnum The status of the model direct comments * String Comments about the model direct activities * Activity All of the activities that are part of the model direct objects * Object All of the objects that are part of the model direct provenances * ProvenanceInfo Model-level provenance information direct","title":"Slots"},{"location":"Model/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Model/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"Model/#mappings","text":"Mapping Type Mapped Value self gocam:Model native gocam:Model","title":"Mappings"},{"location":"Model/#linkml-source","text":"","title":"LinkML Source"},{"location":"Model/#direct","text":"name: Model description: A model of a biological program consisting of a set of causally connected activities from_schema: https://w3id.org/gocam attributes: id: name: id description: The identifier of the model. Should be in gocam namespace. from_schema: https://w3id.org/gocam rank: 1000 identifier: true domain_of: - Model - Activity - Object range: uriorcurie required: true title: name: title description: The human-readable descriptive title of the model from_schema: https://w3id.org/gocam rank: 1000 slot_uri: dct:title domain_of: - Model taxon: name: taxon description: The primary taxon that the model is about from_schema: https://w3id.org/gocam rank: 1000 domain_of: - Model range: TaxonTermObject status: name: status description: The status of the model from_schema: https://w3id.org/gocam aliases: - model state rank: 1000 slot_uri: pav:status domain_of: - Model range: ModelStateEnum comments: name: comments description: Comments about the model from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:comment multivalued: true domain_of: - Model activities: name: activities description: All of the activities that are part of the model from_schema: https://w3id.org/gocam rank: 1000 multivalued: true domain_of: - Model range: Activity inlined: true inlined_as_list: true objects: name: objects description: All of the objects that are part of the model. This includes terms as well as publications and database objects like gene. This is not strictly part of the data managed by the model, it is for convenience, and should be refreshed from outside. from_schema: https://w3id.org/gocam rank: 1000 multivalued: true domain_of: - Model range: Object inlined: true inlined_as_list: true provenances: name: provenances description: Model-level provenance information from_schema: https://w3id.org/gocam rank: 1000 multivalued: true domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Direct"},{"location":"Model/#induced","text":"name: Model description: A model of a biological program consisting of a set of causally connected activities from_schema: https://w3id.org/gocam attributes: id: name: id description: The identifier of the model. Should be in gocam namespace. from_schema: https://w3id.org/gocam rank: 1000 identifier: true alias: id owner: Model domain_of: - Model - Activity - Object range: uriorcurie title: name: title description: The human-readable descriptive title of the model from_schema: https://w3id.org/gocam rank: 1000 slot_uri: dct:title alias: title owner: Model domain_of: - Model range: string taxon: name: taxon description: The primary taxon that the model is about from_schema: https://w3id.org/gocam rank: 1000 alias: taxon owner: Model domain_of: - Model range: TaxonTermObject status: name: status description: The status of the model from_schema: https://w3id.org/gocam aliases: - model state rank: 1000 slot_uri: pav:status alias: status owner: Model domain_of: - Model range: ModelStateEnum comments: name: comments description: Comments about the model from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:comment multivalued: true alias: comments owner: Model domain_of: - Model range: string activities: name: activities description: All of the activities that are part of the model from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: activities owner: Model domain_of: - Model range: Activity inlined_as_list: true objects: name: objects description: All of the objects that are part of the model. This includes terms as well as publications and database objects like gene. This is not strictly part of the data managed by the model, it is for convenience, and should be refreshed from outside. from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: objects owner: Model domain_of: - Model range: Object inlined_as_list: true provenances: name: provenances description: Model-level provenance information from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: provenances owner: Model domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined_as_list: true","title":"Induced"},{"location":"ModelStateEnum/","text":"Enum: ModelStateEnum Status of a model URI: ModelStateEnum Permissible Values Value Meaning Description production None development None Slots Name Description status The status of the model Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam LinkML Source name: ModelStateEnum description: Status of a model from_schema: https://w3id.org/gocam rank: 1000 permissible_values: production: text: production development: text: development","title":"Enum: ModelStateEnum"},{"location":"ModelStateEnum/#enum-modelstateenum","text":"Status of a model URI: ModelStateEnum","title":"Enum: ModelStateEnum"},{"location":"ModelStateEnum/#permissible-values","text":"Value Meaning Description production None development None","title":"Permissible Values"},{"location":"ModelStateEnum/#slots","text":"Name Description status The status of the model","title":"Slots"},{"location":"ModelStateEnum/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"ModelStateEnum/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"ModelStateEnum/#linkml-source","text":"name: ModelStateEnum description: Status of a model from_schema: https://w3id.org/gocam rank: 1000 permissible_values: production: text: production development: text: development","title":"LinkML Source"},{"location":"MolecularFunctionAssociation/","text":"Class: MolecularFunctionAssociation An association between an activity and a molecular function term URI: gocam:MolecularFunctionAssociation classDiagram class MolecularFunctionAssociation click MolecularFunctionAssociation href \"../MolecularFunctionAssociation\" TermAssociation <|-- MolecularFunctionAssociation click TermAssociation href \"../TermAssociation\" MolecularFunctionAssociation : evidence MolecularFunctionAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" MolecularFunctionAssociation : provenances MolecularFunctionAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" MolecularFunctionAssociation : term MolecularFunctionAssociation --> \"0..1\" MolecularFunctionTermObject : term click MolecularFunctionTermObject href \"../MolecularFunctionTermObject\" MolecularFunctionAssociation : type Inheritance Association TermAssociation MolecularFunctionAssociation Slots Name Cardinality and Range Description Inheritance term 0..1 MolecularFunctionTermObject The ontology term that describes the nature of the association TermAssociation type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association Usages used by used in type used Activity molecular_function range MolecularFunctionAssociation TODOs account for non-MF activity types in Reactome Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:MolecularFunctionAssociation native gocam:MolecularFunctionAssociation LinkML Source Direct name: MolecularFunctionAssociation description: An association between an activity and a molecular function term todos: - account for non-MF activity types in Reactome from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: MolecularFunctionTermObject Induced name: MolecularFunctionAssociation description: An association between an activity and a molecular function term todos: - account for non-MF activity types in Reactome from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: MolecularFunctionTermObject attributes: term: name: term description: The ontology term that describes the nature of the association from_schema: https://w3id.org/gocam alias: term owner: MolecularFunctionAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: MolecularFunctionTermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: MolecularFunctionAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: MolecularFunctionAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: MolecularFunctionAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Class: MolecularFunctionAssociation"},{"location":"MolecularFunctionAssociation/#class-molecularfunctionassociation","text":"An association between an activity and a molecular function term URI: gocam:MolecularFunctionAssociation classDiagram class MolecularFunctionAssociation click MolecularFunctionAssociation href \"../MolecularFunctionAssociation\" TermAssociation <|-- MolecularFunctionAssociation click TermAssociation href \"../TermAssociation\" MolecularFunctionAssociation : evidence MolecularFunctionAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" MolecularFunctionAssociation : provenances MolecularFunctionAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" MolecularFunctionAssociation : term MolecularFunctionAssociation --> \"0..1\" MolecularFunctionTermObject : term click MolecularFunctionTermObject href \"../MolecularFunctionTermObject\" MolecularFunctionAssociation : type","title":"Class: MolecularFunctionAssociation"},{"location":"MolecularFunctionAssociation/#inheritance","text":"Association TermAssociation MolecularFunctionAssociation","title":"Inheritance"},{"location":"MolecularFunctionAssociation/#slots","text":"Name Cardinality and Range Description Inheritance term 0..1 MolecularFunctionTermObject The ontology term that describes the nature of the association TermAssociation type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association","title":"Slots"},{"location":"MolecularFunctionAssociation/#usages","text":"used by used in type used Activity molecular_function range MolecularFunctionAssociation","title":"Usages"},{"location":"MolecularFunctionAssociation/#todos","text":"account for non-MF activity types in Reactome","title":"TODOs"},{"location":"MolecularFunctionAssociation/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"MolecularFunctionAssociation/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"MolecularFunctionAssociation/#mappings","text":"Mapping Type Mapped Value self gocam:MolecularFunctionAssociation native gocam:MolecularFunctionAssociation","title":"Mappings"},{"location":"MolecularFunctionAssociation/#linkml-source","text":"","title":"LinkML Source"},{"location":"MolecularFunctionAssociation/#direct","text":"name: MolecularFunctionAssociation description: An association between an activity and a molecular function term todos: - account for non-MF activity types in Reactome from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: MolecularFunctionTermObject","title":"Direct"},{"location":"MolecularFunctionAssociation/#induced","text":"name: MolecularFunctionAssociation description: An association between an activity and a molecular function term todos: - account for non-MF activity types in Reactome from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: MolecularFunctionTermObject attributes: term: name: term description: The ontology term that describes the nature of the association from_schema: https://w3id.org/gocam alias: term owner: MolecularFunctionAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: MolecularFunctionTermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: MolecularFunctionAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: MolecularFunctionAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: MolecularFunctionAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Induced"},{"location":"MolecularFunctionTermObject/","text":"Class: MolecularFunctionTermObject A term object that represents a molecular function term from GO URI: gocam:MolecularFunctionTermObject classDiagram class MolecularFunctionTermObject click MolecularFunctionTermObject href \"../MolecularFunctionTermObject\" TermObject <|-- MolecularFunctionTermObject click TermObject href \"../TermObject\" MolecularFunctionTermObject : id MolecularFunctionTermObject : label MolecularFunctionTermObject : obsolete MolecularFunctionTermObject : type Inheritance Object TermObject MolecularFunctionTermObject Slots Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object Usages used by used in type used MolecularFunctionAssociation term range MolecularFunctionTermObject Identifier and Mapping Information Valid ID Prefixes Instances of this class should have identifiers with one of the following prefixes: GO Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:MolecularFunctionTermObject native gocam:MolecularFunctionTermObject LinkML Source Direct name: MolecularFunctionTermObject id_prefixes: - GO description: A term object that represents a molecular function term from GO from_schema: https://w3id.org/gocam is_a: TermObject Induced name: MolecularFunctionTermObject id_prefixes: - GO description: A term object that represents a molecular function term from GO from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: MolecularFunctionTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: MolecularFunctionTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: MolecularFunctionTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: MolecularFunctionTermObject domain_of: - Object range: boolean","title":"Class: MolecularFunctionTermObject"},{"location":"MolecularFunctionTermObject/#class-molecularfunctiontermobject","text":"A term object that represents a molecular function term from GO URI: gocam:MolecularFunctionTermObject classDiagram class MolecularFunctionTermObject click MolecularFunctionTermObject href \"../MolecularFunctionTermObject\" TermObject <|-- MolecularFunctionTermObject click TermObject href \"../TermObject\" MolecularFunctionTermObject : id MolecularFunctionTermObject : label MolecularFunctionTermObject : obsolete MolecularFunctionTermObject : type","title":"Class: MolecularFunctionTermObject"},{"location":"MolecularFunctionTermObject/#inheritance","text":"Object TermObject MolecularFunctionTermObject","title":"Inheritance"},{"location":"MolecularFunctionTermObject/#slots","text":"Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object","title":"Slots"},{"location":"MolecularFunctionTermObject/#usages","text":"used by used in type used MolecularFunctionAssociation term range MolecularFunctionTermObject","title":"Usages"},{"location":"MolecularFunctionTermObject/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"MolecularFunctionTermObject/#valid-id-prefixes","text":"Instances of this class should have identifiers with one of the following prefixes: GO","title":"Valid ID Prefixes"},{"location":"MolecularFunctionTermObject/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"MolecularFunctionTermObject/#mappings","text":"Mapping Type Mapped Value self gocam:MolecularFunctionTermObject native gocam:MolecularFunctionTermObject","title":"Mappings"},{"location":"MolecularFunctionTermObject/#linkml-source","text":"","title":"LinkML Source"},{"location":"MolecularFunctionTermObject/#direct","text":"name: MolecularFunctionTermObject id_prefixes: - GO description: A term object that represents a molecular function term from GO from_schema: https://w3id.org/gocam is_a: TermObject","title":"Direct"},{"location":"MolecularFunctionTermObject/#induced","text":"name: MolecularFunctionTermObject id_prefixes: - GO description: A term object that represents a molecular function term from GO from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: MolecularFunctionTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: MolecularFunctionTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: MolecularFunctionTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: MolecularFunctionTermObject domain_of: - Object range: boolean","title":"Induced"},{"location":"MoleculeAssociation/","text":"Class: MoleculeAssociation An association between an activity and a molecule term URI: gocam:MoleculeAssociation classDiagram class MoleculeAssociation click MoleculeAssociation href \"../MoleculeAssociation\" TermAssociation <|-- MoleculeAssociation click TermAssociation href \"../TermAssociation\" MoleculeAssociation : evidence MoleculeAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" MoleculeAssociation : provenances MoleculeAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" MoleculeAssociation : term MoleculeAssociation --> \"0..1\" MoleculeTermObject : term click MoleculeTermObject href \"../MoleculeTermObject\" MoleculeAssociation : type Inheritance Association TermAssociation MoleculeAssociation Slots Name Cardinality and Range Description Inheritance term 0..1 MoleculeTermObject The ontology term that describes the nature of the association TermAssociation type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association Usages used by used in type used Activity has_direct_input range MoleculeAssociation Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:MoleculeAssociation native gocam:MoleculeAssociation LinkML Source Direct name: MoleculeAssociation description: An association between an activity and a molecule term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: MoleculeTermObject Induced name: MoleculeAssociation description: An association between an activity and a molecule term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: MoleculeTermObject attributes: term: name: term description: The ontology term that describes the nature of the association from_schema: https://w3id.org/gocam alias: term owner: MoleculeAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: MoleculeTermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: MoleculeAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: MoleculeAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: MoleculeAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Class: MoleculeAssociation"},{"location":"MoleculeAssociation/#class-moleculeassociation","text":"An association between an activity and a molecule term URI: gocam:MoleculeAssociation classDiagram class MoleculeAssociation click MoleculeAssociation href \"../MoleculeAssociation\" TermAssociation <|-- MoleculeAssociation click TermAssociation href \"../TermAssociation\" MoleculeAssociation : evidence MoleculeAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" MoleculeAssociation : provenances MoleculeAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" MoleculeAssociation : term MoleculeAssociation --> \"0..1\" MoleculeTermObject : term click MoleculeTermObject href \"../MoleculeTermObject\" MoleculeAssociation : type","title":"Class: MoleculeAssociation"},{"location":"MoleculeAssociation/#inheritance","text":"Association TermAssociation MoleculeAssociation","title":"Inheritance"},{"location":"MoleculeAssociation/#slots","text":"Name Cardinality and Range Description Inheritance term 0..1 MoleculeTermObject The ontology term that describes the nature of the association TermAssociation type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association","title":"Slots"},{"location":"MoleculeAssociation/#usages","text":"used by used in type used Activity has_direct_input range MoleculeAssociation","title":"Usages"},{"location":"MoleculeAssociation/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"MoleculeAssociation/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"MoleculeAssociation/#mappings","text":"Mapping Type Mapped Value self gocam:MoleculeAssociation native gocam:MoleculeAssociation","title":"Mappings"},{"location":"MoleculeAssociation/#linkml-source","text":"","title":"LinkML Source"},{"location":"MoleculeAssociation/#direct","text":"name: MoleculeAssociation description: An association between an activity and a molecule term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: MoleculeTermObject","title":"Direct"},{"location":"MoleculeAssociation/#induced","text":"name: MoleculeAssociation description: An association between an activity and a molecule term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: MoleculeTermObject attributes: term: name: term description: The ontology term that describes the nature of the association from_schema: https://w3id.org/gocam alias: term owner: MoleculeAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: MoleculeTermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: MoleculeAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: MoleculeAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: MoleculeAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Induced"},{"location":"MoleculeTermObject/","text":"Class: MoleculeTermObject A term object that represents a molecule term from CHEBI or UniProtKB URI: gocam:MoleculeTermObject classDiagram class MoleculeTermObject click MoleculeTermObject href \"../MoleculeTermObject\" TermObject <|-- MoleculeTermObject click TermObject href \"../TermObject\" MoleculeTermObject : id MoleculeTermObject : label MoleculeTermObject : obsolete MoleculeTermObject : type Inheritance Object TermObject MoleculeTermObject Slots Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object Usages used by used in type used MoleculeAssociation term range MoleculeTermObject Identifier and Mapping Information Valid ID Prefixes Instances of this class should have identifiers with one of the following prefixes: CHEBI UniProtKB Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:MoleculeTermObject native gocam:MoleculeTermObject LinkML Source Direct name: MoleculeTermObject id_prefixes: - CHEBI - UniProtKB description: A term object that represents a molecule term from CHEBI or UniProtKB from_schema: https://w3id.org/gocam is_a: TermObject Induced name: MoleculeTermObject id_prefixes: - CHEBI - UniProtKB description: A term object that represents a molecule term from CHEBI or UniProtKB from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: MoleculeTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: MoleculeTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: MoleculeTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: MoleculeTermObject domain_of: - Object range: boolean","title":"Class: MoleculeTermObject"},{"location":"MoleculeTermObject/#class-moleculetermobject","text":"A term object that represents a molecule term from CHEBI or UniProtKB URI: gocam:MoleculeTermObject classDiagram class MoleculeTermObject click MoleculeTermObject href \"../MoleculeTermObject\" TermObject <|-- MoleculeTermObject click TermObject href \"../TermObject\" MoleculeTermObject : id MoleculeTermObject : label MoleculeTermObject : obsolete MoleculeTermObject : type","title":"Class: MoleculeTermObject"},{"location":"MoleculeTermObject/#inheritance","text":"Object TermObject MoleculeTermObject","title":"Inheritance"},{"location":"MoleculeTermObject/#slots","text":"Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object","title":"Slots"},{"location":"MoleculeTermObject/#usages","text":"used by used in type used MoleculeAssociation term range MoleculeTermObject","title":"Usages"},{"location":"MoleculeTermObject/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"MoleculeTermObject/#valid-id-prefixes","text":"Instances of this class should have identifiers with one of the following prefixes: CHEBI UniProtKB","title":"Valid ID Prefixes"},{"location":"MoleculeTermObject/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"MoleculeTermObject/#mappings","text":"Mapping Type Mapped Value self gocam:MoleculeTermObject native gocam:MoleculeTermObject","title":"Mappings"},{"location":"MoleculeTermObject/#linkml-source","text":"","title":"LinkML Source"},{"location":"MoleculeTermObject/#direct","text":"name: MoleculeTermObject id_prefixes: - CHEBI - UniProtKB description: A term object that represents a molecule term from CHEBI or UniProtKB from_schema: https://w3id.org/gocam is_a: TermObject","title":"Direct"},{"location":"MoleculeTermObject/#induced","text":"name: MoleculeTermObject id_prefixes: - CHEBI - UniProtKB description: A term object that represents a molecule term from CHEBI or UniProtKB from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: MoleculeTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: MoleculeTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: MoleculeTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: MoleculeTermObject domain_of: - Object range: boolean","title":"Induced"},{"location":"Ncname/","text":"Type: Ncname Prefix part of CURIE URI: xsd:string base : NCName uri : xsd:string repr : str Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam","title":"Type: Ncname"},{"location":"Ncname/#type-ncname","text":"Prefix part of CURIE URI: xsd:string base : NCName uri : xsd:string repr : str","title":"Type: Ncname"},{"location":"Ncname/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Ncname/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"Nodeidentifier/","text":"Type: Nodeidentifier A URI, CURIE or BNODE that represents a node in a model. URI: shex:nonLiteral base : NodeIdentifier uri : shex:nonLiteral repr : str Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam","title":"Type: Nodeidentifier"},{"location":"Nodeidentifier/#type-nodeidentifier","text":"A URI, CURIE or BNODE that represents a node in a model. URI: shex:nonLiteral base : NodeIdentifier uri : shex:nonLiteral repr : str","title":"Type: Nodeidentifier"},{"location":"Nodeidentifier/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Nodeidentifier/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"Object/","text":"Class: Object An abstract class for all identified objects in a model URI: gocam:Object classDiagram class Object click Object href \"../Object\" Object <|-- TermObject click TermObject href \"../TermObject\" Object <|-- PublicationObject click PublicationObject href \"../PublicationObject\" Object : id Object : label Object : obsolete Object : type Inheritance Object TermObject PublicationObject Slots Name Cardinality and Range Description Inheritance id 1 Uriorcurie direct label 0..1 String direct type 0..1 Uriorcurie direct obsolete 0..1 Boolean direct Usages used by used in type used Model objects range Object EvidenceItem with_objects range Object Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:Object native gocam:Object LinkML Source Direct name: Object description: An abstract class for all identified objects in a model from_schema: https://w3id.org/gocam attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label domain_of: - Object type: name: type from_schema: https://w3id.org/gocam designates_type: true domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 domain_of: - Object range: boolean Induced name: Object description: An abstract class for all identified objects in a model from_schema: https://w3id.org/gocam attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: Object domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: Object domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: Object domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: Object domain_of: - Object range: boolean","title":"Class: Object"},{"location":"Object/#class-object","text":"An abstract class for all identified objects in a model URI: gocam:Object classDiagram class Object click Object href \"../Object\" Object <|-- TermObject click TermObject href \"../TermObject\" Object <|-- PublicationObject click PublicationObject href \"../PublicationObject\" Object : id Object : label Object : obsolete Object : type","title":"Class: Object"},{"location":"Object/#inheritance","text":"Object TermObject PublicationObject","title":"Inheritance"},{"location":"Object/#slots","text":"Name Cardinality and Range Description Inheritance id 1 Uriorcurie direct label 0..1 String direct type 0..1 Uriorcurie direct obsolete 0..1 Boolean direct","title":"Slots"},{"location":"Object/#usages","text":"used by used in type used Model objects range Object EvidenceItem with_objects range Object","title":"Usages"},{"location":"Object/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Object/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"Object/#mappings","text":"Mapping Type Mapped Value self gocam:Object native gocam:Object","title":"Mappings"},{"location":"Object/#linkml-source","text":"","title":"LinkML Source"},{"location":"Object/#direct","text":"name: Object description: An abstract class for all identified objects in a model from_schema: https://w3id.org/gocam attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label domain_of: - Object type: name: type from_schema: https://w3id.org/gocam designates_type: true domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 domain_of: - Object range: boolean","title":"Direct"},{"location":"Object/#induced","text":"name: Object description: An abstract class for all identified objects in a model from_schema: https://w3id.org/gocam attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: Object domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: Object domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: Object domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: Object domain_of: - Object range: boolean","title":"Induced"},{"location":"Objectidentifier/","text":"Type: Objectidentifier A URI or CURIE that represents an object in the model. URI: shex:iri base : ElementIdentifier uri : shex:iri repr : str Comments Used for inheritance and type checking Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam","title":"Type: Objectidentifier"},{"location":"Objectidentifier/#type-objectidentifier","text":"A URI or CURIE that represents an object in the model. URI: shex:iri base : ElementIdentifier uri : shex:iri repr : str","title":"Type: Objectidentifier"},{"location":"Objectidentifier/#comments","text":"Used for inheritance and type checking","title":"Comments"},{"location":"Objectidentifier/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Objectidentifier/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"PhaseTermObject/","text":"Class: PhaseTermObject A term object that represents a phase term from GO or UBERON URI: gocam:PhaseTermObject classDiagram class PhaseTermObject click PhaseTermObject href \"../PhaseTermObject\" TermObject <|-- PhaseTermObject click TermObject href \"../TermObject\" PhaseTermObject : id PhaseTermObject : label PhaseTermObject : obsolete PhaseTermObject : type Inheritance Object TermObject PhaseTermObject Slots Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object Identifier and Mapping Information Valid ID Prefixes Instances of this class should have identifiers with one of the following prefixes: GO UBERON PO Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:PhaseTermObject native gocam:PhaseTermObject LinkML Source Direct name: PhaseTermObject id_prefixes: - GO - UBERON - PO description: A term object that represents a phase term from GO or UBERON from_schema: https://w3id.org/gocam is_a: TermObject Induced name: PhaseTermObject id_prefixes: - GO - UBERON - PO description: A term object that represents a phase term from GO or UBERON from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: PhaseTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: PhaseTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: PhaseTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: PhaseTermObject domain_of: - Object range: boolean","title":"Class: PhaseTermObject"},{"location":"PhaseTermObject/#class-phasetermobject","text":"A term object that represents a phase term from GO or UBERON URI: gocam:PhaseTermObject classDiagram class PhaseTermObject click PhaseTermObject href \"../PhaseTermObject\" TermObject <|-- PhaseTermObject click TermObject href \"../TermObject\" PhaseTermObject : id PhaseTermObject : label PhaseTermObject : obsolete PhaseTermObject : type","title":"Class: PhaseTermObject"},{"location":"PhaseTermObject/#inheritance","text":"Object TermObject PhaseTermObject","title":"Inheritance"},{"location":"PhaseTermObject/#slots","text":"Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object","title":"Slots"},{"location":"PhaseTermObject/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"PhaseTermObject/#valid-id-prefixes","text":"Instances of this class should have identifiers with one of the following prefixes: GO UBERON PO","title":"Valid ID Prefixes"},{"location":"PhaseTermObject/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"PhaseTermObject/#mappings","text":"Mapping Type Mapped Value self gocam:PhaseTermObject native gocam:PhaseTermObject","title":"Mappings"},{"location":"PhaseTermObject/#linkml-source","text":"","title":"LinkML Source"},{"location":"PhaseTermObject/#direct","text":"name: PhaseTermObject id_prefixes: - GO - UBERON - PO description: A term object that represents a phase term from GO or UBERON from_schema: https://w3id.org/gocam is_a: TermObject","title":"Direct"},{"location":"PhaseTermObject/#induced","text":"name: PhaseTermObject id_prefixes: - GO - UBERON - PO description: A term object that represents a phase term from GO or UBERON from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: PhaseTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: PhaseTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: PhaseTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: PhaseTermObject domain_of: - Object range: boolean","title":"Induced"},{"location":"PredicateTermObject/","text":"Class: PredicateTermObject A term object that represents a taxon term from NCBITaxon URI: gocam:PredicateTermObject classDiagram class PredicateTermObject click PredicateTermObject href \"../PredicateTermObject\" TermObject <|-- PredicateTermObject click TermObject href \"../TermObject\" PredicateTermObject : id PredicateTermObject : label PredicateTermObject : obsolete PredicateTermObject : type Inheritance Object TermObject PredicateTermObject Slots Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object Usages used by used in type used CausalAssociation predicate range PredicateTermObject Identifier and Mapping Information Valid ID Prefixes Instances of this class should have identifiers with one of the following prefixes: RO Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:PredicateTermObject native gocam:PredicateTermObject LinkML Source Direct name: PredicateTermObject id_prefixes: - RO description: A term object that represents a taxon term from NCBITaxon from_schema: https://w3id.org/gocam is_a: TermObject Induced name: PredicateTermObject id_prefixes: - RO description: A term object that represents a taxon term from NCBITaxon from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: PredicateTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: PredicateTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: PredicateTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: PredicateTermObject domain_of: - Object range: boolean","title":"Class: PredicateTermObject"},{"location":"PredicateTermObject/#class-predicatetermobject","text":"A term object that represents a taxon term from NCBITaxon URI: gocam:PredicateTermObject classDiagram class PredicateTermObject click PredicateTermObject href \"../PredicateTermObject\" TermObject <|-- PredicateTermObject click TermObject href \"../TermObject\" PredicateTermObject : id PredicateTermObject : label PredicateTermObject : obsolete PredicateTermObject : type","title":"Class: PredicateTermObject"},{"location":"PredicateTermObject/#inheritance","text":"Object TermObject PredicateTermObject","title":"Inheritance"},{"location":"PredicateTermObject/#slots","text":"Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object","title":"Slots"},{"location":"PredicateTermObject/#usages","text":"used by used in type used CausalAssociation predicate range PredicateTermObject","title":"Usages"},{"location":"PredicateTermObject/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"PredicateTermObject/#valid-id-prefixes","text":"Instances of this class should have identifiers with one of the following prefixes: RO","title":"Valid ID Prefixes"},{"location":"PredicateTermObject/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"PredicateTermObject/#mappings","text":"Mapping Type Mapped Value self gocam:PredicateTermObject native gocam:PredicateTermObject","title":"Mappings"},{"location":"PredicateTermObject/#linkml-source","text":"","title":"LinkML Source"},{"location":"PredicateTermObject/#direct","text":"name: PredicateTermObject id_prefixes: - RO description: A term object that represents a taxon term from NCBITaxon from_schema: https://w3id.org/gocam is_a: TermObject","title":"Direct"},{"location":"PredicateTermObject/#induced","text":"name: PredicateTermObject id_prefixes: - RO description: A term object that represents a taxon term from NCBITaxon from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: PredicateTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: PredicateTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: PredicateTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: PredicateTermObject domain_of: - Object range: boolean","title":"Induced"},{"location":"ProteinComplexTermObject/","text":"Class: ProteinComplexTermObject A term object that represents a protein complex term from GO URI: gocam:ProteinComplexTermObject classDiagram class ProteinComplexTermObject click ProteinComplexTermObject href \"../ProteinComplexTermObject\" InformationBiomacromoleculeTermObject <|-- ProteinComplexTermObject click InformationBiomacromoleculeTermObject href \"../InformationBiomacromoleculeTermObject\" ProteinComplexTermObject : id ProteinComplexTermObject : label ProteinComplexTermObject : obsolete ProteinComplexTermObject : type Inheritance Object TermObject InformationBiomacromoleculeTermObject ProteinComplexTermObject Slots Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object Usages used by used in type used EnabledByProteinComplexAssociation term range ProteinComplexTermObject Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:ProteinComplexTermObject native gocam:ProteinComplexTermObject LinkML Source Direct name: ProteinComplexTermObject description: A term object that represents a protein complex term from GO from_schema: https://w3id.org/gocam is_a: InformationBiomacromoleculeTermObject Induced name: ProteinComplexTermObject description: A term object that represents a protein complex term from GO from_schema: https://w3id.org/gocam is_a: InformationBiomacromoleculeTermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: ProteinComplexTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: ProteinComplexTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: ProteinComplexTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: ProteinComplexTermObject domain_of: - Object range: boolean","title":"Class: ProteinComplexTermObject"},{"location":"ProteinComplexTermObject/#class-proteincomplextermobject","text":"A term object that represents a protein complex term from GO URI: gocam:ProteinComplexTermObject classDiagram class ProteinComplexTermObject click ProteinComplexTermObject href \"../ProteinComplexTermObject\" InformationBiomacromoleculeTermObject <|-- ProteinComplexTermObject click InformationBiomacromoleculeTermObject href \"../InformationBiomacromoleculeTermObject\" ProteinComplexTermObject : id ProteinComplexTermObject : label ProteinComplexTermObject : obsolete ProteinComplexTermObject : type","title":"Class: ProteinComplexTermObject"},{"location":"ProteinComplexTermObject/#inheritance","text":"Object TermObject InformationBiomacromoleculeTermObject ProteinComplexTermObject","title":"Inheritance"},{"location":"ProteinComplexTermObject/#slots","text":"Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object","title":"Slots"},{"location":"ProteinComplexTermObject/#usages","text":"used by used in type used EnabledByProteinComplexAssociation term range ProteinComplexTermObject","title":"Usages"},{"location":"ProteinComplexTermObject/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"ProteinComplexTermObject/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"ProteinComplexTermObject/#mappings","text":"Mapping Type Mapped Value self gocam:ProteinComplexTermObject native gocam:ProteinComplexTermObject","title":"Mappings"},{"location":"ProteinComplexTermObject/#linkml-source","text":"","title":"LinkML Source"},{"location":"ProteinComplexTermObject/#direct","text":"name: ProteinComplexTermObject description: A term object that represents a protein complex term from GO from_schema: https://w3id.org/gocam is_a: InformationBiomacromoleculeTermObject","title":"Direct"},{"location":"ProteinComplexTermObject/#induced","text":"name: ProteinComplexTermObject description: A term object that represents a protein complex term from GO from_schema: https://w3id.org/gocam is_a: InformationBiomacromoleculeTermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: ProteinComplexTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: ProteinComplexTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: ProteinComplexTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: ProteinComplexTermObject domain_of: - Object range: boolean","title":"Induced"},{"location":"ProvenanceInfo/","text":"Class: ProvenanceInfo Provenance information for an object URI: gocam:ProvenanceInfo classDiagram class ProvenanceInfo click ProvenanceInfo href \"../ProvenanceInfo\" ProvenanceInfo : contributor ProvenanceInfo : created ProvenanceInfo : date ProvenanceInfo : provided_by Slots Name Cardinality and Range Description Inheritance contributor 0..1 String direct created 0..1 String direct date 0..1 String direct provided_by 0..1 String direct Usages used by used in type used Model provenances range ProvenanceInfo Activity provenances range ProvenanceInfo EvidenceItem provenances range ProvenanceInfo Association provenances range ProvenanceInfo EnabledByAssociation provenances range ProvenanceInfo EnabledByGeneProductAssociation provenances range ProvenanceInfo EnabledByProteinComplexAssociation provenances range ProvenanceInfo CausalAssociation provenances range ProvenanceInfo TermAssociation provenances range ProvenanceInfo MolecularFunctionAssociation provenances range ProvenanceInfo BiologicalProcessAssociation provenances range ProvenanceInfo CellularAnatomicalEntityAssociation provenances range ProvenanceInfo CellTypeAssociation provenances range ProvenanceInfo GrossAnatomyAssociation provenances range ProvenanceInfo MoleculeAssociation provenances range ProvenanceInfo Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:ProvenanceInfo native gocam:ProvenanceInfo LinkML Source Direct name: ProvenanceInfo description: Provenance information for an object from_schema: https://w3id.org/gocam attributes: contributor: name: contributor from_schema: https://w3id.org/gocam rank: 1000 slot_uri: dct:contributor domain_of: - ProvenanceInfo created: name: created from_schema: https://w3id.org/gocam rank: 1000 slot_uri: dct:created domain_of: - ProvenanceInfo date: name: date from_schema: https://w3id.org/gocam rank: 1000 slot_uri: dct:date domain_of: - ProvenanceInfo provided_by: name: provided_by from_schema: https://w3id.org/gocam rank: 1000 slot_uri: pav:providedBy domain_of: - ProvenanceInfo Induced name: ProvenanceInfo description: Provenance information for an object from_schema: https://w3id.org/gocam attributes: contributor: name: contributor from_schema: https://w3id.org/gocam rank: 1000 slot_uri: dct:contributor alias: contributor owner: ProvenanceInfo domain_of: - ProvenanceInfo range: string created: name: created from_schema: https://w3id.org/gocam rank: 1000 slot_uri: dct:created alias: created owner: ProvenanceInfo domain_of: - ProvenanceInfo range: string date: name: date from_schema: https://w3id.org/gocam rank: 1000 slot_uri: dct:date alias: date owner: ProvenanceInfo domain_of: - ProvenanceInfo range: string provided_by: name: provided_by from_schema: https://w3id.org/gocam rank: 1000 slot_uri: pav:providedBy alias: provided_by owner: ProvenanceInfo domain_of: - ProvenanceInfo range: string","title":"Class: ProvenanceInfo"},{"location":"ProvenanceInfo/#class-provenanceinfo","text":"Provenance information for an object URI: gocam:ProvenanceInfo classDiagram class ProvenanceInfo click ProvenanceInfo href \"../ProvenanceInfo\" ProvenanceInfo : contributor ProvenanceInfo : created ProvenanceInfo : date ProvenanceInfo : provided_by","title":"Class: ProvenanceInfo"},{"location":"ProvenanceInfo/#slots","text":"Name Cardinality and Range Description Inheritance contributor 0..1 String direct created 0..1 String direct date 0..1 String direct provided_by 0..1 String direct","title":"Slots"},{"location":"ProvenanceInfo/#usages","text":"used by used in type used Model provenances range ProvenanceInfo Activity provenances range ProvenanceInfo EvidenceItem provenances range ProvenanceInfo Association provenances range ProvenanceInfo EnabledByAssociation provenances range ProvenanceInfo EnabledByGeneProductAssociation provenances range ProvenanceInfo EnabledByProteinComplexAssociation provenances range ProvenanceInfo CausalAssociation provenances range ProvenanceInfo TermAssociation provenances range ProvenanceInfo MolecularFunctionAssociation provenances range ProvenanceInfo BiologicalProcessAssociation provenances range ProvenanceInfo CellularAnatomicalEntityAssociation provenances range ProvenanceInfo CellTypeAssociation provenances range ProvenanceInfo GrossAnatomyAssociation provenances range ProvenanceInfo MoleculeAssociation provenances range ProvenanceInfo","title":"Usages"},{"location":"ProvenanceInfo/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"ProvenanceInfo/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"ProvenanceInfo/#mappings","text":"Mapping Type Mapped Value self gocam:ProvenanceInfo native gocam:ProvenanceInfo","title":"Mappings"},{"location":"ProvenanceInfo/#linkml-source","text":"","title":"LinkML Source"},{"location":"ProvenanceInfo/#direct","text":"name: ProvenanceInfo description: Provenance information for an object from_schema: https://w3id.org/gocam attributes: contributor: name: contributor from_schema: https://w3id.org/gocam rank: 1000 slot_uri: dct:contributor domain_of: - ProvenanceInfo created: name: created from_schema: https://w3id.org/gocam rank: 1000 slot_uri: dct:created domain_of: - ProvenanceInfo date: name: date from_schema: https://w3id.org/gocam rank: 1000 slot_uri: dct:date domain_of: - ProvenanceInfo provided_by: name: provided_by from_schema: https://w3id.org/gocam rank: 1000 slot_uri: pav:providedBy domain_of: - ProvenanceInfo","title":"Direct"},{"location":"ProvenanceInfo/#induced","text":"name: ProvenanceInfo description: Provenance information for an object from_schema: https://w3id.org/gocam attributes: contributor: name: contributor from_schema: https://w3id.org/gocam rank: 1000 slot_uri: dct:contributor alias: contributor owner: ProvenanceInfo domain_of: - ProvenanceInfo range: string created: name: created from_schema: https://w3id.org/gocam rank: 1000 slot_uri: dct:created alias: created owner: ProvenanceInfo domain_of: - ProvenanceInfo range: string date: name: date from_schema: https://w3id.org/gocam rank: 1000 slot_uri: dct:date alias: date owner: ProvenanceInfo domain_of: - ProvenanceInfo range: string provided_by: name: provided_by from_schema: https://w3id.org/gocam rank: 1000 slot_uri: pav:providedBy alias: provided_by owner: ProvenanceInfo domain_of: - ProvenanceInfo range: string","title":"Induced"},{"location":"PublicationObject/","text":"Class: PublicationObject An object that represents a publication or other kind of reference URI: gocam:PublicationObject classDiagram class PublicationObject click PublicationObject href \"../PublicationObject\" Object <|-- PublicationObject click Object href \"../Object\" PublicationObject : abstract_text PublicationObject : full_text PublicationObject : id PublicationObject : label PublicationObject : obsolete PublicationObject : type Inheritance Object PublicationObject Slots Name Cardinality and Range Description Inheritance abstract_text 0..1 String direct full_text 0..1 String direct id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object Usages used by used in type used EvidenceItem reference range PublicationObject Identifier and Mapping Information Valid ID Prefixes Instances of this class should have identifiers with one of the following prefixes: PMID GOREF DOI Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:PublicationObject native gocam:PublicationObject LinkML Source Direct name: PublicationObject id_prefixes: - PMID - GOREF - DOI description: An object that represents a publication or other kind of reference from_schema: https://w3id.org/gocam is_a: Object attributes: abstract_text: name: abstract_text from_schema: https://w3id.org/gocam rank: 1000 domain_of: - PublicationObject full_text: name: full_text from_schema: https://w3id.org/gocam rank: 1000 domain_of: - PublicationObject Induced name: PublicationObject id_prefixes: - PMID - GOREF - DOI description: An object that represents a publication or other kind of reference from_schema: https://w3id.org/gocam is_a: Object attributes: abstract_text: name: abstract_text from_schema: https://w3id.org/gocam rank: 1000 alias: abstract_text owner: PublicationObject domain_of: - PublicationObject range: string full_text: name: full_text from_schema: https://w3id.org/gocam rank: 1000 alias: full_text owner: PublicationObject domain_of: - PublicationObject range: string id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: PublicationObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: PublicationObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: PublicationObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: PublicationObject domain_of: - Object range: boolean","title":"Class: PublicationObject"},{"location":"PublicationObject/#class-publicationobject","text":"An object that represents a publication or other kind of reference URI: gocam:PublicationObject classDiagram class PublicationObject click PublicationObject href \"../PublicationObject\" Object <|-- PublicationObject click Object href \"../Object\" PublicationObject : abstract_text PublicationObject : full_text PublicationObject : id PublicationObject : label PublicationObject : obsolete PublicationObject : type","title":"Class: PublicationObject"},{"location":"PublicationObject/#inheritance","text":"Object PublicationObject","title":"Inheritance"},{"location":"PublicationObject/#slots","text":"Name Cardinality and Range Description Inheritance abstract_text 0..1 String direct full_text 0..1 String direct id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object","title":"Slots"},{"location":"PublicationObject/#usages","text":"used by used in type used EvidenceItem reference range PublicationObject","title":"Usages"},{"location":"PublicationObject/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"PublicationObject/#valid-id-prefixes","text":"Instances of this class should have identifiers with one of the following prefixes: PMID GOREF DOI","title":"Valid ID Prefixes"},{"location":"PublicationObject/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"PublicationObject/#mappings","text":"Mapping Type Mapped Value self gocam:PublicationObject native gocam:PublicationObject","title":"Mappings"},{"location":"PublicationObject/#linkml-source","text":"","title":"LinkML Source"},{"location":"PublicationObject/#direct","text":"name: PublicationObject id_prefixes: - PMID - GOREF - DOI description: An object that represents a publication or other kind of reference from_schema: https://w3id.org/gocam is_a: Object attributes: abstract_text: name: abstract_text from_schema: https://w3id.org/gocam rank: 1000 domain_of: - PublicationObject full_text: name: full_text from_schema: https://w3id.org/gocam rank: 1000 domain_of: - PublicationObject","title":"Direct"},{"location":"PublicationObject/#induced","text":"name: PublicationObject id_prefixes: - PMID - GOREF - DOI description: An object that represents a publication or other kind of reference from_schema: https://w3id.org/gocam is_a: Object attributes: abstract_text: name: abstract_text from_schema: https://w3id.org/gocam rank: 1000 alias: abstract_text owner: PublicationObject domain_of: - PublicationObject range: string full_text: name: full_text from_schema: https://w3id.org/gocam rank: 1000 alias: full_text owner: PublicationObject domain_of: - PublicationObject range: string id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: PublicationObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: PublicationObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: PublicationObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: PublicationObject domain_of: - Object range: boolean","title":"Induced"},{"location":"Sparqlpath/","text":"Type: Sparqlpath A string encoding a SPARQL Property Path. The value of the string MUST conform to SPARQL syntax and SHOULD dereference to zero or more valid objects within the current instance document when encoded as RDF. URI: xsd:string base : str uri : xsd:string repr : str Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam","title":"Type: Sparqlpath"},{"location":"Sparqlpath/#type-sparqlpath","text":"A string encoding a SPARQL Property Path. The value of the string MUST conform to SPARQL syntax and SHOULD dereference to zero or more valid objects within the current instance document when encoded as RDF. URI: xsd:string base : str uri : xsd:string repr : str","title":"Type: Sparqlpath"},{"location":"Sparqlpath/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Sparqlpath/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"String/","text":"Type: String A character string URI: xsd:string base : str uri : xsd:string Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam","title":"Type: String"},{"location":"String/#type-string","text":"A character string URI: xsd:string base : str uri : xsd:string","title":"Type: String"},{"location":"String/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"String/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"TaxonTermObject/","text":"Class: TaxonTermObject A term object that represents a taxon term from NCBITaxon URI: gocam:TaxonTermObject classDiagram class TaxonTermObject click TaxonTermObject href \"../TaxonTermObject\" TermObject <|-- TaxonTermObject click TermObject href \"../TermObject\" TaxonTermObject : id TaxonTermObject : label TaxonTermObject : obsolete TaxonTermObject : type Inheritance Object TermObject TaxonTermObject Slots Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object Usages used by used in type used Model taxon range TaxonTermObject Identifier and Mapping Information Valid ID Prefixes Instances of this class should have identifiers with one of the following prefixes: NCBITaxon Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:TaxonTermObject native gocam:TaxonTermObject LinkML Source Direct name: TaxonTermObject id_prefixes: - NCBITaxon description: A term object that represents a taxon term from NCBITaxon from_schema: https://w3id.org/gocam is_a: TermObject Induced name: TaxonTermObject id_prefixes: - NCBITaxon description: A term object that represents a taxon term from NCBITaxon from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: TaxonTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: TaxonTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: TaxonTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: TaxonTermObject domain_of: - Object range: boolean","title":"Class: TaxonTermObject"},{"location":"TaxonTermObject/#class-taxontermobject","text":"A term object that represents a taxon term from NCBITaxon URI: gocam:TaxonTermObject classDiagram class TaxonTermObject click TaxonTermObject href \"../TaxonTermObject\" TermObject <|-- TaxonTermObject click TermObject href \"../TermObject\" TaxonTermObject : id TaxonTermObject : label TaxonTermObject : obsolete TaxonTermObject : type","title":"Class: TaxonTermObject"},{"location":"TaxonTermObject/#inheritance","text":"Object TermObject TaxonTermObject","title":"Inheritance"},{"location":"TaxonTermObject/#slots","text":"Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object","title":"Slots"},{"location":"TaxonTermObject/#usages","text":"used by used in type used Model taxon range TaxonTermObject","title":"Usages"},{"location":"TaxonTermObject/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"TaxonTermObject/#valid-id-prefixes","text":"Instances of this class should have identifiers with one of the following prefixes: NCBITaxon","title":"Valid ID Prefixes"},{"location":"TaxonTermObject/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"TaxonTermObject/#mappings","text":"Mapping Type Mapped Value self gocam:TaxonTermObject native gocam:TaxonTermObject","title":"Mappings"},{"location":"TaxonTermObject/#linkml-source","text":"","title":"LinkML Source"},{"location":"TaxonTermObject/#direct","text":"name: TaxonTermObject id_prefixes: - NCBITaxon description: A term object that represents a taxon term from NCBITaxon from_schema: https://w3id.org/gocam is_a: TermObject","title":"Direct"},{"location":"TaxonTermObject/#induced","text":"name: TaxonTermObject id_prefixes: - NCBITaxon description: A term object that represents a taxon term from NCBITaxon from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: TaxonTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: TaxonTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: TaxonTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: TaxonTermObject domain_of: - Object range: boolean","title":"Induced"},{"location":"TermAssociation/","text":"Class: TermAssociation An association between an activity and a term, potentially with extensions NOTE : this is an abstract class and should not be instantiated directly URI: gocam:TermAssociation classDiagram class TermAssociation click TermAssociation href \"../TermAssociation\" Association <|-- TermAssociation click Association href \"../Association\" TermAssociation <|-- MolecularFunctionAssociation click MolecularFunctionAssociation href \"../MolecularFunctionAssociation\" TermAssociation <|-- BiologicalProcessAssociation click BiologicalProcessAssociation href \"../BiologicalProcessAssociation\" TermAssociation <|-- CellularAnatomicalEntityAssociation click CellularAnatomicalEntityAssociation href \"../CellularAnatomicalEntityAssociation\" TermAssociation <|-- CellTypeAssociation click CellTypeAssociation href \"../CellTypeAssociation\" TermAssociation <|-- GrossAnatomyAssociation click GrossAnatomyAssociation href \"../GrossAnatomyAssociation\" TermAssociation <|-- MoleculeAssociation click MoleculeAssociation href \"../MoleculeAssociation\" TermAssociation : evidence TermAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" TermAssociation : provenances TermAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" TermAssociation : term TermAssociation --> \"0..1\" TermObject : term click TermObject href \"../TermObject\" TermAssociation : type Inheritance Association TermAssociation MolecularFunctionAssociation BiologicalProcessAssociation CellularAnatomicalEntityAssociation CellTypeAssociation GrossAnatomyAssociation MoleculeAssociation Slots Name Cardinality and Range Description Inheritance term 0..1 TermObject The ontology term that describes the nature of the association direct type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:TermAssociation native gocam:TermAssociation LinkML Source Direct name: TermAssociation description: An association between an activity and a term, potentially with extensions from_schema: https://w3id.org/gocam is_a: Association abstract: true attributes: term: name: term description: The ontology term that describes the nature of the association from_schema: https://w3id.org/gocam domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: TermObject Induced name: TermAssociation description: An association between an activity and a term, potentially with extensions from_schema: https://w3id.org/gocam is_a: Association abstract: true attributes: term: name: term description: The ontology term that describes the nature of the association from_schema: https://w3id.org/gocam alias: term owner: TermAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: TermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: TermAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: TermAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: TermAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Class: TermAssociation"},{"location":"TermAssociation/#class-termassociation","text":"An association between an activity and a term, potentially with extensions NOTE : this is an abstract class and should not be instantiated directly URI: gocam:TermAssociation classDiagram class TermAssociation click TermAssociation href \"../TermAssociation\" Association <|-- TermAssociation click Association href \"../Association\" TermAssociation <|-- MolecularFunctionAssociation click MolecularFunctionAssociation href \"../MolecularFunctionAssociation\" TermAssociation <|-- BiologicalProcessAssociation click BiologicalProcessAssociation href \"../BiologicalProcessAssociation\" TermAssociation <|-- CellularAnatomicalEntityAssociation click CellularAnatomicalEntityAssociation href \"../CellularAnatomicalEntityAssociation\" TermAssociation <|-- CellTypeAssociation click CellTypeAssociation href \"../CellTypeAssociation\" TermAssociation <|-- GrossAnatomyAssociation click GrossAnatomyAssociation href \"../GrossAnatomyAssociation\" TermAssociation <|-- MoleculeAssociation click MoleculeAssociation href \"../MoleculeAssociation\" TermAssociation : evidence TermAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" TermAssociation : provenances TermAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" TermAssociation : term TermAssociation --> \"0..1\" TermObject : term click TermObject href \"../TermObject\" TermAssociation : type","title":"Class: TermAssociation"},{"location":"TermAssociation/#inheritance","text":"Association TermAssociation MolecularFunctionAssociation BiologicalProcessAssociation CellularAnatomicalEntityAssociation CellTypeAssociation GrossAnatomyAssociation MoleculeAssociation","title":"Inheritance"},{"location":"TermAssociation/#slots","text":"Name Cardinality and Range Description Inheritance term 0..1 TermObject The ontology term that describes the nature of the association direct type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association","title":"Slots"},{"location":"TermAssociation/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"TermAssociation/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"TermAssociation/#mappings","text":"Mapping Type Mapped Value self gocam:TermAssociation native gocam:TermAssociation","title":"Mappings"},{"location":"TermAssociation/#linkml-source","text":"","title":"LinkML Source"},{"location":"TermAssociation/#direct","text":"name: TermAssociation description: An association between an activity and a term, potentially with extensions from_schema: https://w3id.org/gocam is_a: Association abstract: true attributes: term: name: term description: The ontology term that describes the nature of the association from_schema: https://w3id.org/gocam domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: TermObject","title":"Direct"},{"location":"TermAssociation/#induced","text":"name: TermAssociation description: An association between an activity and a term, potentially with extensions from_schema: https://w3id.org/gocam is_a: Association abstract: true attributes: term: name: term description: The ontology term that describes the nature of the association from_schema: https://w3id.org/gocam alias: term owner: TermAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: TermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: TermAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: TermAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: TermAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Induced"},{"location":"TermObject/","text":"Class: TermObject An abstract class for all ontology term objects NOTE : this is an abstract class and should not be instantiated directly URI: gocam:TermObject classDiagram class TermObject click TermObject href \"../TermObject\" Object <|-- TermObject click Object href \"../Object\" TermObject <|-- EvidenceTermObject click EvidenceTermObject href \"../EvidenceTermObject\" TermObject <|-- MolecularFunctionTermObject click MolecularFunctionTermObject href \"../MolecularFunctionTermObject\" TermObject <|-- BiologicalProcessTermObject click BiologicalProcessTermObject href \"../BiologicalProcessTermObject\" TermObject <|-- CellularAnatomicalEntityTermObject click CellularAnatomicalEntityTermObject href \"../CellularAnatomicalEntityTermObject\" TermObject <|-- MoleculeTermObject click MoleculeTermObject href \"../MoleculeTermObject\" TermObject <|-- CellTypeTermObject click CellTypeTermObject href \"../CellTypeTermObject\" TermObject <|-- GrossAnatomicalStructureTermObject click GrossAnatomicalStructureTermObject href \"../GrossAnatomicalStructureTermObject\" TermObject <|-- PhaseTermObject click PhaseTermObject href \"../PhaseTermObject\" TermObject <|-- InformationBiomacromoleculeTermObject click InformationBiomacromoleculeTermObject href \"../InformationBiomacromoleculeTermObject\" TermObject <|-- TaxonTermObject click TaxonTermObject href \"../TaxonTermObject\" TermObject <|-- PredicateTermObject click PredicateTermObject href \"../PredicateTermObject\" TermObject : id TermObject : label TermObject : obsolete TermObject : type Inheritance Object TermObject EvidenceTermObject MolecularFunctionTermObject BiologicalProcessTermObject CellularAnatomicalEntityTermObject MoleculeTermObject CellTypeTermObject GrossAnatomicalStructureTermObject PhaseTermObject InformationBiomacromoleculeTermObject TaxonTermObject PredicateTermObject Slots Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object Usages used by used in type used TermAssociation term range TermObject Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:TermObject native gocam:TermObject LinkML Source Direct name: TermObject description: An abstract class for all ontology term objects from_schema: https://w3id.org/gocam is_a: Object abstract: true Induced name: TermObject description: An abstract class for all ontology term objects from_schema: https://w3id.org/gocam is_a: Object abstract: true attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: TermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: TermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: TermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: TermObject domain_of: - Object range: boolean","title":"Class: TermObject"},{"location":"TermObject/#class-termobject","text":"An abstract class for all ontology term objects NOTE : this is an abstract class and should not be instantiated directly URI: gocam:TermObject classDiagram class TermObject click TermObject href \"../TermObject\" Object <|-- TermObject click Object href \"../Object\" TermObject <|-- EvidenceTermObject click EvidenceTermObject href \"../EvidenceTermObject\" TermObject <|-- MolecularFunctionTermObject click MolecularFunctionTermObject href \"../MolecularFunctionTermObject\" TermObject <|-- BiologicalProcessTermObject click BiologicalProcessTermObject href \"../BiologicalProcessTermObject\" TermObject <|-- CellularAnatomicalEntityTermObject click CellularAnatomicalEntityTermObject href \"../CellularAnatomicalEntityTermObject\" TermObject <|-- MoleculeTermObject click MoleculeTermObject href \"../MoleculeTermObject\" TermObject <|-- CellTypeTermObject click CellTypeTermObject href \"../CellTypeTermObject\" TermObject <|-- GrossAnatomicalStructureTermObject click GrossAnatomicalStructureTermObject href \"../GrossAnatomicalStructureTermObject\" TermObject <|-- PhaseTermObject click PhaseTermObject href \"../PhaseTermObject\" TermObject <|-- InformationBiomacromoleculeTermObject click InformationBiomacromoleculeTermObject href \"../InformationBiomacromoleculeTermObject\" TermObject <|-- TaxonTermObject click TaxonTermObject href \"../TaxonTermObject\" TermObject <|-- PredicateTermObject click PredicateTermObject href \"../PredicateTermObject\" TermObject : id TermObject : label TermObject : obsolete TermObject : type","title":"Class: TermObject"},{"location":"TermObject/#inheritance","text":"Object TermObject EvidenceTermObject MolecularFunctionTermObject BiologicalProcessTermObject CellularAnatomicalEntityTermObject MoleculeTermObject CellTypeTermObject GrossAnatomicalStructureTermObject PhaseTermObject InformationBiomacromoleculeTermObject TaxonTermObject PredicateTermObject","title":"Inheritance"},{"location":"TermObject/#slots","text":"Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object","title":"Slots"},{"location":"TermObject/#usages","text":"used by used in type used TermAssociation term range TermObject","title":"Usages"},{"location":"TermObject/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"TermObject/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"TermObject/#mappings","text":"Mapping Type Mapped Value self gocam:TermObject native gocam:TermObject","title":"Mappings"},{"location":"TermObject/#linkml-source","text":"","title":"LinkML Source"},{"location":"TermObject/#direct","text":"name: TermObject description: An abstract class for all ontology term objects from_schema: https://w3id.org/gocam is_a: Object abstract: true","title":"Direct"},{"location":"TermObject/#induced","text":"name: TermObject description: An abstract class for all ontology term objects from_schema: https://w3id.org/gocam is_a: Object abstract: true attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: TermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: TermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: TermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: TermObject domain_of: - Object range: boolean","title":"Induced"},{"location":"Time/","text":"Type: Time A time object represents a (local) time of day, independent of any particular day URI: xsd:time base : XSDTime uri : xsd:time repr : str Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam","title":"Type: Time"},{"location":"Time/#type-time","text":"A time object represents a (local) time of day, independent of any particular day URI: xsd:time base : XSDTime uri : xsd:time repr : str","title":"Type: Time"},{"location":"Time/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Time/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"Uri/","text":"Type: Uri a complete URI URI: xsd:anyURI base : URI uri : xsd:anyURI repr : str Comments in RDF serializations a slot with range of uri is treated as a literal or type xsd:anyURI unless it is an identifier or a reference to an identifier, in which case it is translated directly to a node Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam","title":"Type: Uri"},{"location":"Uri/#type-uri","text":"a complete URI URI: xsd:anyURI base : URI uri : xsd:anyURI repr : str","title":"Type: Uri"},{"location":"Uri/#comments","text":"in RDF serializations a slot with range of uri is treated as a literal or type xsd:anyURI unless it is an identifier or a reference to an identifier, in which case it is translated directly to a node","title":"Comments"},{"location":"Uri/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Uri/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"Uriorcurie/","text":"Type: Uriorcurie a URI or a CURIE URI: xsd:anyURI base : URIorCURIE uri : xsd:anyURI repr : str Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam","title":"Type: Uriorcurie"},{"location":"Uriorcurie/#type-uriorcurie","text":"a URI or a CURIE URI: xsd:anyURI base : URIorCURIE uri : xsd:anyURI repr : str","title":"Type: Uriorcurie"},{"location":"Uriorcurie/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Uriorcurie/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"about/","text":"gocam GO CAM Data Model (Python)","title":"About"},{"location":"about/#gocam","text":"GO CAM Data Model (Python)","title":"gocam"},{"location":"abstract_text/","text":"Slot: abstract_text URI: gocam:abstract_text Applicable Classes Name Description Modifies Slot PublicationObject An object that represents a publication or other kind of reference no Properties Range: String Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam LinkML Source name: abstract_text from_schema: https://w3id.org/gocam rank: 1000 alias: abstract_text owner: PublicationObject domain_of: - PublicationObject range: string","title":"Slot: abstract_text"},{"location":"abstract_text/#slot-abstract_text","text":"URI: gocam:abstract_text","title":"Slot: abstract_text"},{"location":"abstract_text/#applicable-classes","text":"Name Description Modifies Slot PublicationObject An object that represents a publication or other kind of reference no","title":"Applicable Classes"},{"location":"abstract_text/#properties","text":"Range: String","title":"Properties"},{"location":"abstract_text/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"abstract_text/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"abstract_text/#linkml-source","text":"name: abstract_text from_schema: https://w3id.org/gocam rank: 1000 alias: abstract_text owner: PublicationObject domain_of: - PublicationObject range: string","title":"LinkML Source"},{"location":"activities/","text":"Slot: activities All of the activities that are part of the model URI: gocam:activities Applicable Classes Name Description Modifies Slot Model A model of a biological program consisting of a set of causally connected act... no Properties Range: Activity Multivalued: True Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam LinkML Source name: activities description: All of the activities that are part of the model from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: activities owner: Model domain_of: - Model range: Activity inlined: true inlined_as_list: true","title":"Slot: activities"},{"location":"activities/#slot-activities","text":"All of the activities that are part of the model URI: gocam:activities","title":"Slot: activities"},{"location":"activities/#applicable-classes","text":"Name Description Modifies Slot Model A model of a biological program consisting of a set of causally connected act... no","title":"Applicable Classes"},{"location":"activities/#properties","text":"Range: Activity Multivalued: True","title":"Properties"},{"location":"activities/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"activities/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"activities/#linkml-source","text":"name: activities description: All of the activities that are part of the model from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: activities owner: Model domain_of: - Model range: Activity inlined: true inlined_as_list: true","title":"LinkML Source"},{"location":"causal_associations/","text":"Slot: causal_associations The causal associations that connect this activity to other activities URI: gocam:causal_associations Applicable Classes Name Description Modifies Slot Activity An individual activity in a causal model, representing the individual molecul... no Properties Range: CausalAssociation Multivalued: True Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam LinkML Source name: causal_associations description: The causal associations that connect this activity to other activities from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: causal_associations owner: Activity domain_of: - Activity range: CausalAssociation inlined: true inlined_as_list: true","title":"Slot: causal_associations"},{"location":"causal_associations/#slot-causal_associations","text":"The causal associations that connect this activity to other activities URI: gocam:causal_associations","title":"Slot: causal_associations"},{"location":"causal_associations/#applicable-classes","text":"Name Description Modifies Slot Activity An individual activity in a causal model, representing the individual molecul... no","title":"Applicable Classes"},{"location":"causal_associations/#properties","text":"Range: CausalAssociation Multivalued: True","title":"Properties"},{"location":"causal_associations/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"causal_associations/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"causal_associations/#linkml-source","text":"name: causal_associations description: The causal associations that connect this activity to other activities from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: causal_associations owner: Activity domain_of: - Activity range: CausalAssociation inlined: true inlined_as_list: true","title":"LinkML Source"},{"location":"comments/","text":"Slot: comments Comments about the model URI: rdfs:comment Applicable Classes Name Description Modifies Slot Model A model of a biological program consisting of a set of causally connected act... no Properties Range: String Multivalued: True Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam LinkML Source name: comments description: Comments about the model from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:comment multivalued: true alias: comments owner: Model domain_of: - Model range: string","title":"Slot: comments"},{"location":"comments/#slot-comments","text":"Comments about the model URI: rdfs:comment","title":"Slot: comments"},{"location":"comments/#applicable-classes","text":"Name Description Modifies Slot Model A model of a biological program consisting of a set of causally connected act... no","title":"Applicable Classes"},{"location":"comments/#properties","text":"Range: String Multivalued: True","title":"Properties"},{"location":"comments/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"comments/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"comments/#linkml-source","text":"name: comments description: Comments about the model from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:comment multivalued: true alias: comments owner: Model domain_of: - 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ProvenanceInfo range: string","title":"LinkML Source"},{"location":"created/","text":"Slot: created URI: dct:created Applicable Classes Name Description Modifies Slot ProvenanceInfo Provenance information for an object no Properties Range: String Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam LinkML Source name: created from_schema: https://w3id.org/gocam rank: 1000 slot_uri: dct:created alias: created owner: ProvenanceInfo domain_of: - ProvenanceInfo range: string","title":"Slot: created"},{"location":"created/#slot-created","text":"URI: dct:created","title":"Slot: created"},{"location":"created/#applicable-classes","text":"Name Description Modifies Slot ProvenanceInfo Provenance information for an object no","title":"Applicable Classes"},{"location":"created/#properties","text":"Range: String","title":"Properties"},{"location":"created/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"created/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"created/#linkml-source","text":"name: created from_schema: https://w3id.org/gocam rank: 1000 slot_uri: dct:created alias: created owner: ProvenanceInfo domain_of: - 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EnabledByProteinComplexAssociation range: GeneProductTermObject","title":"LinkML Source"},{"location":"molecular_function/","text":"Slot: molecular_function The molecular function that is carried out by the gene product or complex URI: gocam:molecular_function Applicable Classes Name Description Modifies Slot Activity An individual activity in a causal model, representing the individual molecul... no Properties Range: MolecularFunctionAssociation TODOs currently BP, CC etc are at the level of the activity, not the MolecularFunctionAssociation Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam LinkML Source name: molecular_function description: The molecular function that is carried out by the gene product or complex todos: - currently BP, CC etc are at the level of the activity, not the MolecularFunctionAssociation from_schema: https://w3id.org/gocam rank: 1000 alias: molecular_function owner: Activity domain_of: - Activity range: MolecularFunctionAssociation inlined: true","title":"Slot: molecular_function"},{"location":"molecular_function/#slot-molecular_function","text":"The molecular function that is carried out by the gene product or complex URI: gocam:molecular_function","title":"Slot: molecular_function"},{"location":"molecular_function/#applicable-classes","text":"Name Description Modifies Slot Activity An individual activity in a causal model, representing the individual molecul... no","title":"Applicable Classes"},{"location":"molecular_function/#properties","text":"Range: MolecularFunctionAssociation","title":"Properties"},{"location":"molecular_function/#todos","text":"currently BP, CC etc are at the level of the activity, not the MolecularFunctionAssociation","title":"TODOs"},{"location":"molecular_function/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"molecular_function/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"molecular_function/#linkml-source","text":"name: molecular_function description: The molecular function that is carried out by the gene product or complex todos: - 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This includes terms as well as publications and database objects like gene. This is not strictly part of the data managed by the model, it is for convenience, and should be refreshed from outside. URI: gocam:objects Applicable Classes Name Description Modifies Slot Model A model of a biological program consisting of a set of causally connected act... no Properties Range: Object Multivalued: True Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam LinkML Source name: objects description: All of the objects that are part of the model. This includes terms as well as publications and database objects like gene. 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CellularAnatomicalEntityAssociation An association between an activity and a cellular anatomical entity term GrossAnatomyAssociation An association between an activity and a gross anatomical structure term MolecularFunctionAssociation An association between an activity and a molecular function term MoleculeAssociation An association between an activity and a molecule term EvidenceItem An individual piece of evidence that is associated with an assertion in a model Model A model of a biological program consisting of a set of causally connected activities Object An abstract class for all identified objects in a model PublicationObject An object that represents a publication or other kind of reference TermObject An abstract class for all ontology term objects BiologicalProcessTermObject A term object that represents a biological process term from GO CellTypeTermObject A term object that represents a cell type term from CL CellularAnatomicalEntityTermObject A term object that represents a cellular anatomical entity term from GO EvidenceTermObject A term object that represents an evidence term from ECO GrossAnatomicalStructureTermObject A term object that represents a gross anatomical structure term from UBERON InformationBiomacromoleculeTermObject An abstract class for all information biomacromolecule term objects GeneProductTermObject A term object that represents a gene product term from GO or UniProtKB ProteinComplexTermObject A term object that represents a protein complex term from GO MolecularFunctionTermObject A term object that represents a molecular function term from GO MoleculeTermObject A term object that represents a molecule term from CHEBI or UniProtKB PhaseTermObject A term object that represents a phase term from GO or UBERON PredicateTermObject A term object that represents a taxon term from NCBITaxon TaxonTermObject A term object that represents a taxon term from NCBITaxon ProvenanceInfo Provenance information for an object","title":"Classes"},{"location":"#slots","text":"Slot Description abstract_text activities All of the activities that are part of the model causal_associations The causal associations that connect this activity to other activities comments Comments about the model contributor created date downstream_activity The activity unit that is downstream of this one enabled_by The gene product or complex that carries out the activity evidence full_text has_input The input molecules that are directly consumed by the activity has_output The output molecules that are directly produced by the activity has_primary_input The primary input molecule that is directly consumed by the activity has_primary_output The primary output molecule that is directly produced by the activity id The identifier of the model label members The gene products that are part of the complex molecular_function The molecular function that is carried out by the gene product or complex objects All of the objects that are part of the model obsolete occurs_in The cellular location in which the activity occurs part_of The larger biological process in which the activity is a part predicate The RO relation that represents the type of relationship provenances Model-level provenance information provided_by reference The publication of reference that describes the evidence status The status of the model taxon The primary taxon that the model is about term The ECO term representing the type of evidence title The human-readable descriptive title of the model type with_objects Supporting database entities or terms","title":"Slots"},{"location":"#enumerations","text":"Enumeration Description CausalPredicateEnum InformationBiomacromoleculeCategory ModelStateEnum Status of a model","title":"Enumerations"},{"location":"#types","text":"Type Description Boolean A binary (true or false) value Curie a compact URI Date a date (year, month and day) in an idealized calendar DateOrDatetime Either a date or a datetime Datetime The combination of a date and time Decimal A real number with arbitrary precision that conforms to the xsd:decimal speci... Double A real number that conforms to the xsd:double specification Float A real number that conforms to the xsd:float specification Integer An integer Jsonpath A string encoding a JSON Path Jsonpointer A string encoding a JSON Pointer Ncname Prefix part of CURIE Nodeidentifier A URI, CURIE or BNODE that represents a node in a model Objectidentifier A URI or CURIE that represents an object in the model Sparqlpath A string encoding a SPARQL Property Path String A character string Time A time object represents a (local) time of day, independent of any particular... Uri a complete URI Uriorcurie a URI or a CURIE","title":"Types"},{"location":"#subsets","text":"Subset Description","title":"Subsets"},{"location":"Activity/","text":"Class: Activity An individual activity in a causal model, representing the individual molecular activity of a single gene product or complex in the context of a particular model URI: gocam:Activity classDiagram class Activity click Activity href \"../Activity\" Activity : causal_associations Activity --> \"*\" CausalAssociation : causal_associations click CausalAssociation href \"../CausalAssociation\" Activity : enabled_by Activity --> \"0..1\" EnabledByAssociation : enabled_by click EnabledByAssociation href \"../EnabledByAssociation\" Activity : has_input Activity --> \"*\" MoleculeAssociation : has_input click MoleculeAssociation href \"../MoleculeAssociation\" Activity : has_output Activity --> \"*\" MoleculeAssociation : has_output click MoleculeAssociation href \"../MoleculeAssociation\" Activity : has_primary_input Activity --> \"0..1\" MoleculeAssociation : has_primary_input click MoleculeAssociation href \"../MoleculeAssociation\" Activity : has_primary_output Activity --> \"0..1\" MoleculeAssociation : has_primary_output click MoleculeAssociation href \"../MoleculeAssociation\" Activity : id Activity : molecular_function Activity --> \"0..1\" MolecularFunctionAssociation : molecular_function click MolecularFunctionAssociation href \"../MolecularFunctionAssociation\" Activity : occurs_in Activity --> \"0..1\" CellularAnatomicalEntityAssociation : occurs_in click CellularAnatomicalEntityAssociation href \"../CellularAnatomicalEntityAssociation\" Activity : part_of Activity --> \"0..1\" BiologicalProcessAssociation : part_of click BiologicalProcessAssociation href \"../BiologicalProcessAssociation\" Activity : provenances Activity --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" Slots Name Cardinality and Range Description Inheritance id 1 Uriorcurie Identifier of the activity unit direct enabled_by 0..1 EnabledByAssociation The gene product or complex that carries out the activity direct molecular_function 0..1 MolecularFunctionAssociation The molecular function that is carried out by the gene product or complex direct occurs_in 0..1 CellularAnatomicalEntityAssociation The cellular location in which the activity occurs direct part_of 0..1 BiologicalProcessAssociation The larger biological process in which the activity is a part direct has_input * MoleculeAssociation The input molecules that are directly consumed by the activity direct has_primary_input 0..1 MoleculeAssociation The primary input molecule that is directly consumed by the activity direct has_output * MoleculeAssociation The output molecules that are directly produced by the activity direct has_primary_output 0..1 MoleculeAssociation The primary output molecule that is directly produced by the activity direct causal_associations * CausalAssociation The causal associations that connect this activity to other activities direct provenances * ProvenanceInfo Provenance information for the activity direct Usages used by used in type used Model activities range Activity CausalAssociation downstream_activity range Activity Aliases annoton Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:Activity native gocam:Activity LinkML Source Direct name: Activity description: An individual activity in a causal model, representing the individual molecular activity of a single gene product or complex in the context of a particular model from_schema: https://w3id.org/gocam aliases: - annoton attributes: id: name: id description: Identifier of the activity unit. Should be in gocam namespace. comments: - Typically does not need to be exposed to end-user, this exists to allow activity flows from_schema: https://w3id.org/gocam identifier: true domain_of: - Model - Activity - Object range: uriorcurie required: true enabled_by: name: enabled_by description: The gene product or complex that carries out the activity from_schema: https://w3id.org/gocam rank: 1000 domain_of: - Activity range: EnabledByAssociation inlined: true molecular_function: name: molecular_function description: The molecular function that is carried out by the gene product or complex todos: - currently BP, CC etc are at the level of the activity, not the MolecularFunctionAssociation from_schema: https://w3id.org/gocam rank: 1000 domain_of: - Activity range: MolecularFunctionAssociation inlined: true occurs_in: name: occurs_in description: The cellular location in which the activity occurs from_schema: https://w3id.org/gocam rank: 1000 domain_of: - Activity range: CellularAnatomicalEntityAssociation inlined: true part_of: name: part_of description: The larger biological process in which the activity is a part from_schema: https://w3id.org/gocam rank: 1000 domain_of: - Activity range: BiologicalProcessAssociation inlined: true has_input: name: has_input description: The input molecules that are directly consumed by the activity from_schema: https://w3id.org/gocam rank: 1000 multivalued: true domain_of: - Activity range: MoleculeAssociation inlined: true inlined_as_list: true has_primary_input: name: has_primary_input description: The primary input molecule that is directly consumed by the activity from_schema: https://w3id.org/gocam rank: 1000 domain_of: - Activity range: MoleculeAssociation inlined: true has_output: name: has_output description: The output molecules that are directly produced by the activity from_schema: https://w3id.org/gocam rank: 1000 multivalued: true domain_of: - Activity range: MoleculeAssociation inlined: true inlined_as_list: true has_primary_output: name: has_primary_output description: The primary output molecule that is directly produced by the activity from_schema: https://w3id.org/gocam rank: 1000 domain_of: - Activity range: MoleculeAssociation inlined: true causal_associations: name: causal_associations description: The causal associations that connect this activity to other activities from_schema: https://w3id.org/gocam rank: 1000 multivalued: true domain_of: - Activity range: CausalAssociation inlined: true inlined_as_list: true provenances: name: provenances description: Provenance information for the activity from_schema: https://w3id.org/gocam multivalued: true domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true Induced name: Activity description: An individual activity in a causal model, representing the individual molecular activity of a single gene product or complex in the context of a particular model from_schema: https://w3id.org/gocam aliases: - annoton attributes: id: name: id description: Identifier of the activity unit. Should be in gocam namespace. comments: - Typically does not need to be exposed to end-user, this exists to allow activity flows from_schema: https://w3id.org/gocam identifier: true alias: id owner: Activity domain_of: - Model - Activity - Object range: uriorcurie required: true enabled_by: name: enabled_by description: The gene product or complex that carries out the activity from_schema: https://w3id.org/gocam rank: 1000 alias: enabled_by owner: Activity domain_of: - Activity range: EnabledByAssociation inlined: true molecular_function: name: molecular_function description: The molecular function that is carried out by the gene product or complex todos: - currently BP, CC etc are at the level of the activity, not the MolecularFunctionAssociation from_schema: https://w3id.org/gocam rank: 1000 alias: molecular_function owner: Activity domain_of: - Activity range: MolecularFunctionAssociation inlined: true occurs_in: name: occurs_in description: The cellular location in which the activity occurs from_schema: https://w3id.org/gocam rank: 1000 alias: occurs_in owner: Activity domain_of: - Activity range: CellularAnatomicalEntityAssociation inlined: true part_of: name: part_of description: The larger biological process in which the activity is a part from_schema: https://w3id.org/gocam rank: 1000 alias: part_of owner: Activity domain_of: - Activity range: BiologicalProcessAssociation inlined: true has_input: name: has_input description: The input molecules that are directly consumed by the activity from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: has_input owner: Activity domain_of: - Activity range: MoleculeAssociation inlined: true inlined_as_list: true has_primary_input: name: has_primary_input description: The primary input molecule that is directly consumed by the activity from_schema: https://w3id.org/gocam rank: 1000 alias: has_primary_input owner: Activity domain_of: - Activity range: MoleculeAssociation inlined: true has_output: name: has_output description: The output molecules that are directly produced by the activity from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: has_output owner: Activity domain_of: - Activity range: MoleculeAssociation inlined: true inlined_as_list: true has_primary_output: name: has_primary_output description: The primary output molecule that is directly produced by the activity from_schema: https://w3id.org/gocam rank: 1000 alias: has_primary_output owner: Activity domain_of: - Activity range: MoleculeAssociation inlined: true causal_associations: name: causal_associations description: The causal associations that connect this activity to other activities from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: causal_associations owner: Activity domain_of: - Activity range: CausalAssociation inlined: true inlined_as_list: true provenances: name: provenances description: Provenance information for the activity from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: Activity domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Class: Activity"},{"location":"Activity/#class-activity","text":"An individual activity in a causal model, representing the individual molecular activity of a single gene product or complex in the context of a particular model URI: gocam:Activity classDiagram class Activity click Activity href \"../Activity\" Activity : causal_associations Activity --> \"*\" CausalAssociation : causal_associations click CausalAssociation href \"../CausalAssociation\" Activity : enabled_by Activity --> \"0..1\" EnabledByAssociation : enabled_by click EnabledByAssociation href \"../EnabledByAssociation\" Activity : has_input Activity --> \"*\" MoleculeAssociation : has_input click MoleculeAssociation href \"../MoleculeAssociation\" Activity : has_output Activity --> \"*\" MoleculeAssociation : has_output click MoleculeAssociation href \"../MoleculeAssociation\" Activity : has_primary_input Activity --> \"0..1\" MoleculeAssociation : has_primary_input click MoleculeAssociation href \"../MoleculeAssociation\" Activity : has_primary_output Activity --> \"0..1\" MoleculeAssociation : has_primary_output click MoleculeAssociation href \"../MoleculeAssociation\" Activity : id Activity : molecular_function Activity --> \"0..1\" MolecularFunctionAssociation : molecular_function click MolecularFunctionAssociation href \"../MolecularFunctionAssociation\" Activity : occurs_in Activity --> \"0..1\" CellularAnatomicalEntityAssociation : occurs_in click CellularAnatomicalEntityAssociation href \"../CellularAnatomicalEntityAssociation\" Activity : part_of Activity --> \"0..1\" BiologicalProcessAssociation : part_of click BiologicalProcessAssociation href \"../BiologicalProcessAssociation\" Activity : provenances Activity --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\"","title":"Class: Activity"},{"location":"Activity/#slots","text":"Name Cardinality and Range Description Inheritance id 1 Uriorcurie Identifier of the activity unit direct enabled_by 0..1 EnabledByAssociation The gene product or complex that carries out the activity direct molecular_function 0..1 MolecularFunctionAssociation The molecular function that is carried out by the gene product or complex direct occurs_in 0..1 CellularAnatomicalEntityAssociation The cellular location in which the activity occurs direct part_of 0..1 BiologicalProcessAssociation The larger biological process in which the activity is a part direct has_input * MoleculeAssociation The input molecules that are directly consumed by the activity direct has_primary_input 0..1 MoleculeAssociation The primary input molecule that is directly consumed by the activity direct has_output * MoleculeAssociation The output molecules that are directly produced by the activity direct has_primary_output 0..1 MoleculeAssociation The primary output molecule that is directly produced by the activity direct causal_associations * CausalAssociation The causal associations that connect this activity to other activities direct provenances * ProvenanceInfo Provenance information for the activity direct","title":"Slots"},{"location":"Activity/#usages","text":"used by used in type used Model activities range Activity CausalAssociation downstream_activity range Activity","title":"Usages"},{"location":"Activity/#aliases","text":"annoton","title":"Aliases"},{"location":"Activity/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Activity/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"Activity/#mappings","text":"Mapping Type Mapped Value self gocam:Activity native gocam:Activity","title":"Mappings"},{"location":"Activity/#linkml-source","text":"","title":"LinkML Source"},{"location":"Activity/#direct","text":"name: Activity description: An individual activity in a causal model, representing the individual molecular activity of a single gene product or complex in the context of a particular model from_schema: https://w3id.org/gocam aliases: - annoton attributes: id: name: id description: Identifier of the activity unit. Should be in gocam namespace. comments: - Typically does not need to be exposed to end-user, this exists to allow activity flows from_schema: https://w3id.org/gocam identifier: true domain_of: - Model - Activity - Object range: uriorcurie required: true enabled_by: name: enabled_by description: The gene product or complex that carries out the activity from_schema: https://w3id.org/gocam rank: 1000 domain_of: - Activity range: EnabledByAssociation inlined: true molecular_function: name: molecular_function description: The molecular function that is carried out by the gene product or complex todos: - currently BP, CC etc are at the level of the activity, not the MolecularFunctionAssociation from_schema: https://w3id.org/gocam rank: 1000 domain_of: - Activity range: MolecularFunctionAssociation inlined: true occurs_in: name: occurs_in description: The cellular location in which the activity occurs from_schema: https://w3id.org/gocam rank: 1000 domain_of: - Activity range: CellularAnatomicalEntityAssociation inlined: true part_of: name: part_of description: The larger biological process in which the activity is a part from_schema: https://w3id.org/gocam rank: 1000 domain_of: - Activity range: BiologicalProcessAssociation inlined: true has_input: name: has_input description: The input molecules that are directly consumed by the activity from_schema: https://w3id.org/gocam rank: 1000 multivalued: true domain_of: - Activity range: MoleculeAssociation inlined: true inlined_as_list: true has_primary_input: name: has_primary_input description: The primary input molecule that is directly consumed by the activity from_schema: https://w3id.org/gocam rank: 1000 domain_of: - Activity range: MoleculeAssociation inlined: true has_output: name: has_output description: The output molecules that are directly produced by the activity from_schema: https://w3id.org/gocam rank: 1000 multivalued: true domain_of: - Activity range: MoleculeAssociation inlined: true inlined_as_list: true has_primary_output: name: has_primary_output description: The primary output molecule that is directly produced by the activity from_schema: https://w3id.org/gocam rank: 1000 domain_of: - Activity range: MoleculeAssociation inlined: true causal_associations: name: causal_associations description: The causal associations that connect this activity to other activities from_schema: https://w3id.org/gocam rank: 1000 multivalued: true domain_of: - Activity range: CausalAssociation inlined: true inlined_as_list: true provenances: name: provenances description: Provenance information for the activity from_schema: https://w3id.org/gocam multivalued: true domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Direct"},{"location":"Activity/#induced","text":"name: Activity description: An individual activity in a causal model, representing the individual molecular activity of a single gene product or complex in the context of a particular model from_schema: https://w3id.org/gocam aliases: - annoton attributes: id: name: id description: Identifier of the activity unit. Should be in gocam namespace. comments: - Typically does not need to be exposed to end-user, this exists to allow activity flows from_schema: https://w3id.org/gocam identifier: true alias: id owner: Activity domain_of: - Model - Activity - Object range: uriorcurie required: true enabled_by: name: enabled_by description: The gene product or complex that carries out the activity from_schema: https://w3id.org/gocam rank: 1000 alias: enabled_by owner: Activity domain_of: - Activity range: EnabledByAssociation inlined: true molecular_function: name: molecular_function description: The molecular function that is carried out by the gene product or complex todos: - currently BP, CC etc are at the level of the activity, not the MolecularFunctionAssociation from_schema: https://w3id.org/gocam rank: 1000 alias: molecular_function owner: Activity domain_of: - Activity range: MolecularFunctionAssociation inlined: true occurs_in: name: occurs_in description: The cellular location in which the activity occurs from_schema: https://w3id.org/gocam rank: 1000 alias: occurs_in owner: Activity domain_of: - Activity range: CellularAnatomicalEntityAssociation inlined: true part_of: name: part_of description: The larger biological process in which the activity is a part from_schema: https://w3id.org/gocam rank: 1000 alias: part_of owner: Activity domain_of: - Activity range: BiologicalProcessAssociation inlined: true has_input: name: has_input description: The input molecules that are directly consumed by the activity from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: has_input owner: Activity domain_of: - Activity range: MoleculeAssociation inlined: true inlined_as_list: true has_primary_input: name: has_primary_input description: The primary input molecule that is directly consumed by the activity from_schema: https://w3id.org/gocam rank: 1000 alias: has_primary_input owner: Activity domain_of: - Activity range: MoleculeAssociation inlined: true has_output: name: has_output description: The output molecules that are directly produced by the activity from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: has_output owner: Activity domain_of: - Activity range: MoleculeAssociation inlined: true inlined_as_list: true has_primary_output: name: has_primary_output description: The primary output molecule that is directly produced by the activity from_schema: https://w3id.org/gocam rank: 1000 alias: has_primary_output owner: Activity domain_of: - Activity range: MoleculeAssociation inlined: true causal_associations: name: causal_associations description: The causal associations that connect this activity to other activities from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: causal_associations owner: Activity domain_of: - Activity range: CausalAssociation inlined: true inlined_as_list: true provenances: name: provenances description: Provenance information for the activity from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: Activity domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Induced"},{"location":"Association/","text":"Class: Association An abstract grouping for different kinds of evidence-associated provenance NOTE : this is an abstract class and should not be instantiated directly URI: gocam:Association classDiagram class Association click Association href \"../Association\" Association <|-- EnabledByAssociation click EnabledByAssociation href \"../EnabledByAssociation\" Association <|-- CausalAssociation click CausalAssociation href \"../CausalAssociation\" Association <|-- TermAssociation click TermAssociation href \"../TermAssociation\" Association : evidence Association --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" Association : provenances Association --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" Association : type Inheritance Association EnabledByAssociation CausalAssociation TermAssociation Slots Name Cardinality and Range Description Inheritance type 0..1 String direct evidence * EvidenceItem direct provenances * ProvenanceInfo direct Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:Association native gocam:Association LinkML Source Direct name: Association description: An abstract grouping for different kinds of evidence-associated provenance from_schema: https://w3id.org/gocam abstract: true attributes: type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true domain_of: - Association - Object evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true Induced name: Association description: An abstract grouping for different kinds of evidence-associated provenance from_schema: https://w3id.org/gocam abstract: true attributes: type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: Association domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: Association domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: Association domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Class: Association"},{"location":"Association/#class-association","text":"An abstract grouping for different kinds of evidence-associated provenance NOTE : this is an abstract class and should not be instantiated directly URI: gocam:Association classDiagram class Association click Association href \"../Association\" Association <|-- EnabledByAssociation click EnabledByAssociation href \"../EnabledByAssociation\" Association <|-- CausalAssociation click CausalAssociation href \"../CausalAssociation\" Association <|-- TermAssociation click TermAssociation href \"../TermAssociation\" Association : evidence Association --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" Association : provenances Association --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" Association : type","title":"Class: Association"},{"location":"Association/#inheritance","text":"Association EnabledByAssociation CausalAssociation TermAssociation","title":"Inheritance"},{"location":"Association/#slots","text":"Name Cardinality and Range Description Inheritance type 0..1 String direct evidence * EvidenceItem direct provenances * ProvenanceInfo direct","title":"Slots"},{"location":"Association/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Association/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"Association/#mappings","text":"Mapping Type Mapped Value self gocam:Association native gocam:Association","title":"Mappings"},{"location":"Association/#linkml-source","text":"","title":"LinkML Source"},{"location":"Association/#direct","text":"name: Association description: An abstract grouping for different kinds of evidence-associated provenance from_schema: https://w3id.org/gocam abstract: true attributes: type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true domain_of: - Association - Object evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Direct"},{"location":"Association/#induced","text":"name: Association description: An abstract grouping for different kinds of evidence-associated provenance from_schema: https://w3id.org/gocam abstract: true attributes: type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: Association domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: Association domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: Association domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Induced"},{"location":"BiologicalProcessAssociation/","text":"Class: BiologicalProcessAssociation An association between an activity and a biological process term URI: gocam:BiologicalProcessAssociation classDiagram class BiologicalProcessAssociation click BiologicalProcessAssociation href \"../BiologicalProcessAssociation\" TermAssociation <|-- BiologicalProcessAssociation click TermAssociation href \"../TermAssociation\" BiologicalProcessAssociation : evidence BiologicalProcessAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" BiologicalProcessAssociation : provenances BiologicalProcessAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" BiologicalProcessAssociation : term BiologicalProcessAssociation --> \"0..1\" BiologicalProcessTermObject : term click BiologicalProcessTermObject href \"../BiologicalProcessTermObject\" BiologicalProcessAssociation : type Inheritance Association TermAssociation BiologicalProcessAssociation Slots Name Cardinality and Range Description Inheritance term 0..1 BiologicalProcessTermObject The ontology term that describes the nature of the association TermAssociation type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association Usages used by used in type used Activity part_of range BiologicalProcessAssociation Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:BiologicalProcessAssociation native gocam:BiologicalProcessAssociation LinkML Source Direct name: BiologicalProcessAssociation description: An association between an activity and a biological process term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: BiologicalProcessTermObject happens_during: name: happens_during description: Optional extension describing where the BP takes place range: PhaseTermObject part_of: name: part_of description: Optional extension allowing hierarchical nesting of BPs range: BiologicalProcessTermObject Induced name: BiologicalProcessAssociation description: An association between an activity and a biological process term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: BiologicalProcessTermObject happens_during: name: happens_during description: Optional extension describing where the BP takes place range: PhaseTermObject part_of: name: part_of description: Optional extension allowing hierarchical nesting of BPs range: BiologicalProcessTermObject attributes: term: name: term description: The ontology term that describes the nature of the association from_schema: https://w3id.org/gocam alias: term owner: BiologicalProcessAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: BiologicalProcessTermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: BiologicalProcessAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: BiologicalProcessAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: BiologicalProcessAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Class: BiologicalProcessAssociation"},{"location":"BiologicalProcessAssociation/#class-biologicalprocessassociation","text":"An association between an activity and a biological process term URI: gocam:BiologicalProcessAssociation classDiagram class BiologicalProcessAssociation click BiologicalProcessAssociation href \"../BiologicalProcessAssociation\" TermAssociation <|-- BiologicalProcessAssociation click TermAssociation href \"../TermAssociation\" BiologicalProcessAssociation : evidence BiologicalProcessAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" BiologicalProcessAssociation : provenances BiologicalProcessAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" BiologicalProcessAssociation : term BiologicalProcessAssociation --> \"0..1\" BiologicalProcessTermObject : term click BiologicalProcessTermObject href \"../BiologicalProcessTermObject\" BiologicalProcessAssociation : type","title":"Class: BiologicalProcessAssociation"},{"location":"BiologicalProcessAssociation/#inheritance","text":"Association TermAssociation BiologicalProcessAssociation","title":"Inheritance"},{"location":"BiologicalProcessAssociation/#slots","text":"Name Cardinality and Range Description Inheritance term 0..1 BiologicalProcessTermObject The ontology term that describes the nature of the association TermAssociation type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association","title":"Slots"},{"location":"BiologicalProcessAssociation/#usages","text":"used by used in type used Activity part_of range BiologicalProcessAssociation","title":"Usages"},{"location":"BiologicalProcessAssociation/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"BiologicalProcessAssociation/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"BiologicalProcessAssociation/#mappings","text":"Mapping Type Mapped Value self gocam:BiologicalProcessAssociation native gocam:BiologicalProcessAssociation","title":"Mappings"},{"location":"BiologicalProcessAssociation/#linkml-source","text":"","title":"LinkML Source"},{"location":"BiologicalProcessAssociation/#direct","text":"name: BiologicalProcessAssociation description: An association between an activity and a biological process term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: BiologicalProcessTermObject happens_during: name: happens_during description: Optional extension describing where the BP takes place range: PhaseTermObject part_of: name: part_of description: Optional extension allowing hierarchical nesting of BPs range: BiologicalProcessTermObject","title":"Direct"},{"location":"BiologicalProcessAssociation/#induced","text":"name: BiologicalProcessAssociation description: An association between an activity and a biological process term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: BiologicalProcessTermObject happens_during: name: happens_during description: Optional extension describing where the BP takes place range: PhaseTermObject part_of: name: part_of description: Optional extension allowing hierarchical nesting of BPs range: BiologicalProcessTermObject attributes: term: name: term description: The ontology term that describes the nature of the association from_schema: https://w3id.org/gocam alias: term owner: BiologicalProcessAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: BiologicalProcessTermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: BiologicalProcessAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: BiologicalProcessAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: BiologicalProcessAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Induced"},{"location":"BiologicalProcessTermObject/","text":"Class: BiologicalProcessTermObject A term object that represents a biological process term from GO URI: gocam:BiologicalProcessTermObject classDiagram class BiologicalProcessTermObject click BiologicalProcessTermObject href \"../BiologicalProcessTermObject\" TermObject <|-- BiologicalProcessTermObject click TermObject href \"../TermObject\" BiologicalProcessTermObject : id BiologicalProcessTermObject : label BiologicalProcessTermObject : obsolete BiologicalProcessTermObject : type Inheritance Object TermObject BiologicalProcessTermObject Slots Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object Usages used by used in type used BiologicalProcessAssociation term range BiologicalProcessTermObject Identifier and Mapping Information Valid ID Prefixes Instances of this class should have identifiers with one of the following prefixes: GO Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:BiologicalProcessTermObject native gocam:BiologicalProcessTermObject LinkML Source Direct name: BiologicalProcessTermObject id_prefixes: - GO description: A term object that represents a biological process term from GO from_schema: https://w3id.org/gocam is_a: TermObject Induced name: BiologicalProcessTermObject id_prefixes: - GO description: A term object that represents a biological process term from GO from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: BiologicalProcessTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: BiologicalProcessTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: BiologicalProcessTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: BiologicalProcessTermObject domain_of: - Object range: boolean","title":"Class: BiologicalProcessTermObject"},{"location":"BiologicalProcessTermObject/#class-biologicalprocesstermobject","text":"A term object that represents a biological process term from GO URI: gocam:BiologicalProcessTermObject classDiagram class BiologicalProcessTermObject click BiologicalProcessTermObject href \"../BiologicalProcessTermObject\" TermObject <|-- BiologicalProcessTermObject click TermObject href \"../TermObject\" BiologicalProcessTermObject : id BiologicalProcessTermObject : label BiologicalProcessTermObject : obsolete BiologicalProcessTermObject : type","title":"Class: BiologicalProcessTermObject"},{"location":"BiologicalProcessTermObject/#inheritance","text":"Object TermObject BiologicalProcessTermObject","title":"Inheritance"},{"location":"BiologicalProcessTermObject/#slots","text":"Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object","title":"Slots"},{"location":"BiologicalProcessTermObject/#usages","text":"used by used in type used BiologicalProcessAssociation term range BiologicalProcessTermObject","title":"Usages"},{"location":"BiologicalProcessTermObject/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"BiologicalProcessTermObject/#valid-id-prefixes","text":"Instances of this class should have identifiers with one of the following prefixes: GO","title":"Valid ID Prefixes"},{"location":"BiologicalProcessTermObject/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"BiologicalProcessTermObject/#mappings","text":"Mapping Type Mapped Value self gocam:BiologicalProcessTermObject native gocam:BiologicalProcessTermObject","title":"Mappings"},{"location":"BiologicalProcessTermObject/#linkml-source","text":"","title":"LinkML Source"},{"location":"BiologicalProcessTermObject/#direct","text":"name: BiologicalProcessTermObject id_prefixes: - GO description: A term object that represents a biological process term from GO from_schema: https://w3id.org/gocam is_a: TermObject","title":"Direct"},{"location":"BiologicalProcessTermObject/#induced","text":"name: BiologicalProcessTermObject id_prefixes: - GO description: A term object that represents a biological process term from GO from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: BiologicalProcessTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: BiologicalProcessTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: BiologicalProcessTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: BiologicalProcessTermObject domain_of: - Object range: boolean","title":"Induced"},{"location":"Boolean/","text":"Type: Boolean A binary (true or false) value URI: xsd:boolean base : Bool uri : xsd:boolean repr : bool Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam","title":"Type: Boolean"},{"location":"Boolean/#type-boolean","text":"A binary (true or false) value URI: xsd:boolean base : Bool uri : xsd:boolean repr : bool","title":"Type: Boolean"},{"location":"Boolean/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Boolean/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"CausalAssociation/","text":"Class: CausalAssociation A causal association between two activities URI: gocam:CausalAssociation classDiagram class CausalAssociation click CausalAssociation href \"../CausalAssociation\" Association <|-- CausalAssociation click Association href \"../Association\" CausalAssociation : downstream_activity CausalAssociation --> \"0..1\" Activity : downstream_activity click Activity href \"../Activity\" CausalAssociation : evidence CausalAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" CausalAssociation : predicate CausalAssociation --> \"0..1\" PredicateTermObject : predicate click PredicateTermObject href \"../PredicateTermObject\" CausalAssociation : provenances CausalAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" CausalAssociation : type Inheritance Association CausalAssociation Slots Name Cardinality and Range Description Inheritance predicate 0..1 PredicateTermObject The RO relation that represents the type of relationship direct downstream_activity 0..1 Activity The activity unit that is downstream of this one direct type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association Usages used by used in type used Activity causal_associations range CausalAssociation Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:CausalAssociation native gocam:CausalAssociation LinkML Source Direct name: CausalAssociation description: A causal association between two activities from_schema: https://w3id.org/gocam is_a: Association attributes: predicate: name: predicate description: The RO relation that represents the type of relationship from_schema: https://w3id.org/gocam rank: 1000 domain_of: - CausalAssociation range: PredicateTermObject downstream_activity: name: downstream_activity description: The activity unit that is downstream of this one from_schema: https://w3id.org/gocam aliases: - object rank: 1000 domain_of: - CausalAssociation range: Activity Induced name: CausalAssociation description: A causal association between two activities from_schema: https://w3id.org/gocam is_a: Association attributes: predicate: name: predicate description: The RO relation that represents the type of relationship from_schema: https://w3id.org/gocam rank: 1000 alias: predicate owner: CausalAssociation domain_of: - CausalAssociation range: PredicateTermObject downstream_activity: name: downstream_activity description: The activity unit that is downstream of this one from_schema: https://w3id.org/gocam aliases: - object rank: 1000 alias: downstream_activity owner: CausalAssociation domain_of: - CausalAssociation range: Activity type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: CausalAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: CausalAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: CausalAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Class: CausalAssociation"},{"location":"CausalAssociation/#class-causalassociation","text":"A causal association between two activities URI: gocam:CausalAssociation classDiagram class CausalAssociation click CausalAssociation href \"../CausalAssociation\" Association <|-- CausalAssociation click Association href \"../Association\" CausalAssociation : downstream_activity CausalAssociation --> \"0..1\" Activity : downstream_activity click Activity href \"../Activity\" CausalAssociation : evidence CausalAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" CausalAssociation : predicate CausalAssociation --> \"0..1\" PredicateTermObject : predicate click PredicateTermObject href \"../PredicateTermObject\" CausalAssociation : provenances CausalAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" CausalAssociation : type","title":"Class: CausalAssociation"},{"location":"CausalAssociation/#inheritance","text":"Association CausalAssociation","title":"Inheritance"},{"location":"CausalAssociation/#slots","text":"Name Cardinality and Range Description Inheritance predicate 0..1 PredicateTermObject The RO relation that represents the type of relationship direct downstream_activity 0..1 Activity The activity unit that is downstream of this one direct type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association","title":"Slots"},{"location":"CausalAssociation/#usages","text":"used by used in type used Activity causal_associations range CausalAssociation","title":"Usages"},{"location":"CausalAssociation/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"CausalAssociation/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"CausalAssociation/#mappings","text":"Mapping Type Mapped Value self gocam:CausalAssociation native gocam:CausalAssociation","title":"Mappings"},{"location":"CausalAssociation/#linkml-source","text":"","title":"LinkML Source"},{"location":"CausalAssociation/#direct","text":"name: CausalAssociation description: A causal association between two activities from_schema: https://w3id.org/gocam is_a: Association attributes: predicate: name: predicate description: The RO relation that represents the type of relationship from_schema: https://w3id.org/gocam rank: 1000 domain_of: - CausalAssociation range: PredicateTermObject downstream_activity: name: downstream_activity description: The activity unit that is downstream of this one from_schema: https://w3id.org/gocam aliases: - object rank: 1000 domain_of: - CausalAssociation range: Activity","title":"Direct"},{"location":"CausalAssociation/#induced","text":"name: CausalAssociation description: A causal association between two activities from_schema: https://w3id.org/gocam is_a: Association attributes: predicate: name: predicate description: The RO relation that represents the type of relationship from_schema: https://w3id.org/gocam rank: 1000 alias: predicate owner: CausalAssociation domain_of: - CausalAssociation range: PredicateTermObject downstream_activity: name: downstream_activity description: The activity unit that is downstream of this one from_schema: https://w3id.org/gocam aliases: - object rank: 1000 alias: downstream_activity owner: CausalAssociation domain_of: - CausalAssociation range: Activity type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: CausalAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: CausalAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: CausalAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Induced"},{"location":"CausalPredicateEnum/","text":"Enum: CausalPredicateEnum URI: CausalPredicateEnum Permissible Values Value Meaning Description causally upstream of, positive effect RO:0002304 causally upstream of, negative effect RO:0002305 causally upstream of RO:0002411 immediately causally upstream of RO:0002412 causally upstream of or within RO:0002418 causally upstream of or within, negative effect RO:0004046 causally upstream of or within, positive effect RO:0004047 regulates RO:0002211 negatively regulates RO:0002212 positively regulates RO:0002213 Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam LinkML Source name: CausalPredicateEnum from_schema: https://w3id.org/gocam rank: 1000 permissible_values: causally upstream of, positive effect: text: causally upstream of, positive effect meaning: RO:0002304 causally upstream of, negative effect: text: causally upstream of, negative effect meaning: RO:0002305 causally upstream of: text: causally upstream of meaning: RO:0002411 immediately causally upstream of: text: immediately causally upstream of meaning: RO:0002412 causally upstream of or within: text: causally upstream of or within meaning: RO:0002418 causally upstream of or within, negative effect: text: causally upstream of or within, negative effect meaning: RO:0004046 causally upstream of or within, positive effect: text: causally upstream of or within, positive effect meaning: RO:0004047 regulates: text: regulates meaning: RO:0002211 negatively regulates: text: negatively regulates meaning: RO:0002212 positively regulates: text: positively regulates meaning: RO:0002213","title":"Enum: CausalPredicateEnum"},{"location":"CausalPredicateEnum/#enum-causalpredicateenum","text":"URI: CausalPredicateEnum","title":"Enum: CausalPredicateEnum"},{"location":"CausalPredicateEnum/#permissible-values","text":"Value Meaning Description causally upstream of, positive effect RO:0002304 causally upstream of, negative effect RO:0002305 causally upstream of RO:0002411 immediately causally upstream of RO:0002412 causally upstream of or within RO:0002418 causally upstream of or within, negative effect RO:0004046 causally upstream of or within, positive effect RO:0004047 regulates RO:0002211 negatively regulates RO:0002212 positively regulates RO:0002213","title":"Permissible Values"},{"location":"CausalPredicateEnum/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"CausalPredicateEnum/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"CausalPredicateEnum/#linkml-source","text":"name: CausalPredicateEnum from_schema: https://w3id.org/gocam rank: 1000 permissible_values: causally upstream of, positive effect: text: causally upstream of, positive effect meaning: RO:0002304 causally upstream of, negative effect: text: causally upstream of, negative effect meaning: RO:0002305 causally upstream of: text: causally upstream of meaning: RO:0002411 immediately causally upstream of: text: immediately causally upstream of meaning: RO:0002412 causally upstream of or within: text: causally upstream of or within meaning: RO:0002418 causally upstream of or within, negative effect: text: causally upstream of or within, negative effect meaning: RO:0004046 causally upstream of or within, positive effect: text: causally upstream of or within, positive effect meaning: RO:0004047 regulates: text: regulates meaning: RO:0002211 negatively regulates: text: negatively regulates meaning: RO:0002212 positively regulates: text: positively regulates meaning: RO:0002213","title":"LinkML Source"},{"location":"CellTypeAssociation/","text":"Class: CellTypeAssociation An association between an activity and a cell type term URI: gocam:CellTypeAssociation classDiagram class CellTypeAssociation click CellTypeAssociation href \"../CellTypeAssociation\" TermAssociation <|-- CellTypeAssociation click TermAssociation href \"../TermAssociation\" CellTypeAssociation : evidence CellTypeAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" CellTypeAssociation : provenances CellTypeAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" CellTypeAssociation : term CellTypeAssociation --> \"0..1\" CellTypeTermObject : term click CellTypeTermObject href \"../CellTypeTermObject\" CellTypeAssociation : type Inheritance Association TermAssociation CellTypeAssociation Slots Name Cardinality and Range Description Inheritance term 0..1 CellTypeTermObject The ontology term that describes the nature of the association TermAssociation type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:CellTypeAssociation native gocam:CellTypeAssociation LinkML Source Direct name: CellTypeAssociation description: An association between an activity and a cell type term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: CellTypeTermObject part_of: name: part_of range: GrossAnatomyAssociation Induced name: CellTypeAssociation description: An association between an activity and a cell type term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: CellTypeTermObject part_of: name: part_of range: GrossAnatomyAssociation attributes: term: name: term description: The ontology term that describes the nature of the association from_schema: https://w3id.org/gocam alias: term owner: CellTypeAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: CellTypeTermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: CellTypeAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: CellTypeAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: CellTypeAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Class: CellTypeAssociation"},{"location":"CellTypeAssociation/#class-celltypeassociation","text":"An association between an activity and a cell type term URI: gocam:CellTypeAssociation classDiagram class CellTypeAssociation click CellTypeAssociation href \"../CellTypeAssociation\" TermAssociation <|-- CellTypeAssociation click TermAssociation href \"../TermAssociation\" CellTypeAssociation : evidence CellTypeAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" CellTypeAssociation : provenances CellTypeAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" CellTypeAssociation : term CellTypeAssociation --> \"0..1\" CellTypeTermObject : term click CellTypeTermObject href \"../CellTypeTermObject\" CellTypeAssociation : type","title":"Class: CellTypeAssociation"},{"location":"CellTypeAssociation/#inheritance","text":"Association TermAssociation CellTypeAssociation","title":"Inheritance"},{"location":"CellTypeAssociation/#slots","text":"Name Cardinality and Range Description Inheritance term 0..1 CellTypeTermObject The ontology term that describes the nature of the association TermAssociation type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association","title":"Slots"},{"location":"CellTypeAssociation/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"CellTypeAssociation/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"CellTypeAssociation/#mappings","text":"Mapping Type Mapped Value self gocam:CellTypeAssociation native gocam:CellTypeAssociation","title":"Mappings"},{"location":"CellTypeAssociation/#linkml-source","text":"","title":"LinkML Source"},{"location":"CellTypeAssociation/#direct","text":"name: CellTypeAssociation description: An association between an activity and a cell type term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: CellTypeTermObject part_of: name: part_of range: GrossAnatomyAssociation","title":"Direct"},{"location":"CellTypeAssociation/#induced","text":"name: CellTypeAssociation description: An association between an activity and a cell type term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: CellTypeTermObject part_of: name: part_of range: GrossAnatomyAssociation attributes: term: name: term description: The ontology term that describes the nature of the association from_schema: https://w3id.org/gocam alias: term owner: CellTypeAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: CellTypeTermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: CellTypeAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: CellTypeAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: CellTypeAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Induced"},{"location":"CellTypeTermObject/","text":"Class: CellTypeTermObject A term object that represents a cell type term from CL URI: gocam:CellTypeTermObject classDiagram class CellTypeTermObject click CellTypeTermObject href \"../CellTypeTermObject\" TermObject <|-- CellTypeTermObject click TermObject href \"../TermObject\" CellTypeTermObject : id CellTypeTermObject : label CellTypeTermObject : obsolete CellTypeTermObject : type Inheritance Object TermObject CellTypeTermObject Slots Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object Usages used by used in type used CellTypeAssociation term range CellTypeTermObject Identifier and Mapping Information Valid ID Prefixes Instances of this class should have identifiers with one of the following prefixes: CL PO FAO DDANAT Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:CellTypeTermObject native gocam:CellTypeTermObject LinkML Source Direct name: CellTypeTermObject id_prefixes: - CL - PO - FAO - DDANAT description: A term object that represents a cell type term from CL from_schema: https://w3id.org/gocam is_a: TermObject Induced name: CellTypeTermObject id_prefixes: - CL - PO - FAO - DDANAT description: A term object that represents a cell type term from CL from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: CellTypeTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: CellTypeTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: CellTypeTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: CellTypeTermObject domain_of: - Object range: boolean","title":"Class: CellTypeTermObject"},{"location":"CellTypeTermObject/#class-celltypetermobject","text":"A term object that represents a cell type term from CL URI: gocam:CellTypeTermObject classDiagram class CellTypeTermObject click CellTypeTermObject href \"../CellTypeTermObject\" TermObject <|-- CellTypeTermObject click TermObject href \"../TermObject\" CellTypeTermObject : id CellTypeTermObject : label CellTypeTermObject : obsolete CellTypeTermObject : type","title":"Class: CellTypeTermObject"},{"location":"CellTypeTermObject/#inheritance","text":"Object TermObject CellTypeTermObject","title":"Inheritance"},{"location":"CellTypeTermObject/#slots","text":"Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object","title":"Slots"},{"location":"CellTypeTermObject/#usages","text":"used by used in type used CellTypeAssociation term range CellTypeTermObject","title":"Usages"},{"location":"CellTypeTermObject/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"CellTypeTermObject/#valid-id-prefixes","text":"Instances of this class should have identifiers with one of the following prefixes: CL PO FAO DDANAT","title":"Valid ID Prefixes"},{"location":"CellTypeTermObject/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"CellTypeTermObject/#mappings","text":"Mapping Type Mapped Value self gocam:CellTypeTermObject native gocam:CellTypeTermObject","title":"Mappings"},{"location":"CellTypeTermObject/#linkml-source","text":"","title":"LinkML Source"},{"location":"CellTypeTermObject/#direct","text":"name: CellTypeTermObject id_prefixes: - CL - PO - FAO - DDANAT description: A term object that represents a cell type term from CL from_schema: https://w3id.org/gocam is_a: TermObject","title":"Direct"},{"location":"CellTypeTermObject/#induced","text":"name: CellTypeTermObject id_prefixes: - CL - PO - FAO - DDANAT description: A term object that represents a cell type term from CL from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: CellTypeTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: CellTypeTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: CellTypeTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: CellTypeTermObject domain_of: - Object range: boolean","title":"Induced"},{"location":"CellularAnatomicalEntityAssociation/","text":"Class: CellularAnatomicalEntityAssociation An association between an activity and a cellular anatomical entity term URI: gocam:CellularAnatomicalEntityAssociation classDiagram class CellularAnatomicalEntityAssociation click CellularAnatomicalEntityAssociation href \"../CellularAnatomicalEntityAssociation\" TermAssociation <|-- CellularAnatomicalEntityAssociation click TermAssociation href \"../TermAssociation\" CellularAnatomicalEntityAssociation : evidence CellularAnatomicalEntityAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" CellularAnatomicalEntityAssociation : provenances CellularAnatomicalEntityAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" CellularAnatomicalEntityAssociation : term CellularAnatomicalEntityAssociation --> \"0..1\" CellularAnatomicalEntityTermObject : term click CellularAnatomicalEntityTermObject href \"../CellularAnatomicalEntityTermObject\" CellularAnatomicalEntityAssociation : type Inheritance Association TermAssociation CellularAnatomicalEntityAssociation Slots Name Cardinality and Range Description Inheritance term 0..1 CellularAnatomicalEntityTermObject The ontology term that describes the nature of the association TermAssociation type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association Usages used by used in type used Activity occurs_in range CellularAnatomicalEntityAssociation Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:CellularAnatomicalEntityAssociation native gocam:CellularAnatomicalEntityAssociation LinkML Source Direct name: CellularAnatomicalEntityAssociation description: An association between an activity and a cellular anatomical entity term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: CellularAnatomicalEntityTermObject part_of: name: part_of range: CellTypeAssociation Induced name: CellularAnatomicalEntityAssociation description: An association between an activity and a cellular anatomical entity term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: CellularAnatomicalEntityTermObject part_of: name: part_of range: CellTypeAssociation attributes: term: name: term description: The ontology term that describes the nature of the association from_schema: https://w3id.org/gocam alias: term owner: CellularAnatomicalEntityAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: CellularAnatomicalEntityTermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: CellularAnatomicalEntityAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: CellularAnatomicalEntityAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: CellularAnatomicalEntityAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Class: CellularAnatomicalEntityAssociation"},{"location":"CellularAnatomicalEntityAssociation/#class-cellularanatomicalentityassociation","text":"An association between an activity and a cellular anatomical entity term URI: gocam:CellularAnatomicalEntityAssociation classDiagram class CellularAnatomicalEntityAssociation click CellularAnatomicalEntityAssociation href \"../CellularAnatomicalEntityAssociation\" TermAssociation <|-- CellularAnatomicalEntityAssociation click TermAssociation href \"../TermAssociation\" CellularAnatomicalEntityAssociation : evidence CellularAnatomicalEntityAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" CellularAnatomicalEntityAssociation : provenances CellularAnatomicalEntityAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" CellularAnatomicalEntityAssociation : term CellularAnatomicalEntityAssociation --> \"0..1\" CellularAnatomicalEntityTermObject : term click CellularAnatomicalEntityTermObject href \"../CellularAnatomicalEntityTermObject\" CellularAnatomicalEntityAssociation : type","title":"Class: CellularAnatomicalEntityAssociation"},{"location":"CellularAnatomicalEntityAssociation/#inheritance","text":"Association TermAssociation CellularAnatomicalEntityAssociation","title":"Inheritance"},{"location":"CellularAnatomicalEntityAssociation/#slots","text":"Name Cardinality and Range Description Inheritance term 0..1 CellularAnatomicalEntityTermObject The ontology term that describes the nature of the association TermAssociation type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association","title":"Slots"},{"location":"CellularAnatomicalEntityAssociation/#usages","text":"used by used in type used Activity occurs_in range CellularAnatomicalEntityAssociation","title":"Usages"},{"location":"CellularAnatomicalEntityAssociation/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"CellularAnatomicalEntityAssociation/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"CellularAnatomicalEntityAssociation/#mappings","text":"Mapping Type Mapped Value self gocam:CellularAnatomicalEntityAssociation native gocam:CellularAnatomicalEntityAssociation","title":"Mappings"},{"location":"CellularAnatomicalEntityAssociation/#linkml-source","text":"","title":"LinkML Source"},{"location":"CellularAnatomicalEntityAssociation/#direct","text":"name: CellularAnatomicalEntityAssociation description: An association between an activity and a cellular anatomical entity term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: CellularAnatomicalEntityTermObject part_of: name: part_of range: CellTypeAssociation","title":"Direct"},{"location":"CellularAnatomicalEntityAssociation/#induced","text":"name: CellularAnatomicalEntityAssociation description: An association between an activity and a cellular anatomical entity term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: CellularAnatomicalEntityTermObject part_of: name: part_of range: CellTypeAssociation attributes: term: name: term description: The ontology term that describes the nature of the association from_schema: https://w3id.org/gocam alias: term owner: CellularAnatomicalEntityAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: CellularAnatomicalEntityTermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: CellularAnatomicalEntityAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: CellularAnatomicalEntityAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: CellularAnatomicalEntityAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Induced"},{"location":"CellularAnatomicalEntityTermObject/","text":"Class: CellularAnatomicalEntityTermObject A term object that represents a cellular anatomical entity term from GO URI: gocam:CellularAnatomicalEntityTermObject classDiagram class CellularAnatomicalEntityTermObject click CellularAnatomicalEntityTermObject href \"../CellularAnatomicalEntityTermObject\" TermObject <|-- CellularAnatomicalEntityTermObject click TermObject href \"../TermObject\" CellularAnatomicalEntityTermObject : id CellularAnatomicalEntityTermObject : label CellularAnatomicalEntityTermObject : obsolete CellularAnatomicalEntityTermObject : type Inheritance Object TermObject CellularAnatomicalEntityTermObject Slots Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object Usages used by used in type used CellularAnatomicalEntityAssociation term range CellularAnatomicalEntityTermObject Identifier and Mapping Information Valid ID Prefixes Instances of this class should have identifiers with one of the following prefixes: GO Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:CellularAnatomicalEntityTermObject native gocam:CellularAnatomicalEntityTermObject LinkML Source Direct name: CellularAnatomicalEntityTermObject id_prefixes: - GO description: A term object that represents a cellular anatomical entity term from GO from_schema: https://w3id.org/gocam is_a: TermObject Induced name: CellularAnatomicalEntityTermObject id_prefixes: - GO description: A term object that represents a cellular anatomical entity term from GO from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: CellularAnatomicalEntityTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: CellularAnatomicalEntityTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: CellularAnatomicalEntityTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: CellularAnatomicalEntityTermObject domain_of: - Object range: boolean","title":"Class: CellularAnatomicalEntityTermObject"},{"location":"CellularAnatomicalEntityTermObject/#class-cellularanatomicalentitytermobject","text":"A term object that represents a cellular anatomical entity term from GO URI: gocam:CellularAnatomicalEntityTermObject classDiagram class CellularAnatomicalEntityTermObject click CellularAnatomicalEntityTermObject href \"../CellularAnatomicalEntityTermObject\" TermObject <|-- CellularAnatomicalEntityTermObject click TermObject href \"../TermObject\" CellularAnatomicalEntityTermObject : id CellularAnatomicalEntityTermObject : label CellularAnatomicalEntityTermObject : obsolete CellularAnatomicalEntityTermObject : type","title":"Class: CellularAnatomicalEntityTermObject"},{"location":"CellularAnatomicalEntityTermObject/#inheritance","text":"Object TermObject CellularAnatomicalEntityTermObject","title":"Inheritance"},{"location":"CellularAnatomicalEntityTermObject/#slots","text":"Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object","title":"Slots"},{"location":"CellularAnatomicalEntityTermObject/#usages","text":"used by used in type used CellularAnatomicalEntityAssociation term range CellularAnatomicalEntityTermObject","title":"Usages"},{"location":"CellularAnatomicalEntityTermObject/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"CellularAnatomicalEntityTermObject/#valid-id-prefixes","text":"Instances of this class should have identifiers with one of the following prefixes: GO","title":"Valid ID Prefixes"},{"location":"CellularAnatomicalEntityTermObject/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"CellularAnatomicalEntityTermObject/#mappings","text":"Mapping Type Mapped Value self gocam:CellularAnatomicalEntityTermObject native gocam:CellularAnatomicalEntityTermObject","title":"Mappings"},{"location":"CellularAnatomicalEntityTermObject/#linkml-source","text":"","title":"LinkML Source"},{"location":"CellularAnatomicalEntityTermObject/#direct","text":"name: CellularAnatomicalEntityTermObject id_prefixes: - GO description: A term object that represents a cellular anatomical entity term from GO from_schema: https://w3id.org/gocam is_a: TermObject","title":"Direct"},{"location":"CellularAnatomicalEntityTermObject/#induced","text":"name: CellularAnatomicalEntityTermObject id_prefixes: - GO description: A term object that represents a cellular anatomical entity term from GO from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: CellularAnatomicalEntityTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: CellularAnatomicalEntityTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: CellularAnatomicalEntityTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: CellularAnatomicalEntityTermObject domain_of: - Object range: boolean","title":"Induced"},{"location":"Curie/","text":"Type: Curie a compact URI URI: xsd:string base : Curie uri : xsd:string repr : str Comments in RDF serializations this MUST be expanded to a URI in non-RDF serializations MAY be serialized as the compact representation Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam","title":"Type: Curie"},{"location":"Curie/#type-curie","text":"a compact URI URI: xsd:string base : Curie uri : xsd:string repr : str","title":"Type: Curie"},{"location":"Curie/#comments","text":"in RDF serializations this MUST be expanded to a URI in non-RDF serializations MAY be serialized as the compact representation","title":"Comments"},{"location":"Curie/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Curie/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"Date/","text":"Type: Date a date (year, month and day) in an idealized calendar URI: xsd:date base : XSDDate uri : xsd:date repr : str Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam","title":"Type: Date"},{"location":"Date/#type-date","text":"a date (year, month and day) in an idealized calendar URI: xsd:date base : XSDDate uri : xsd:date repr : str","title":"Type: Date"},{"location":"Date/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Date/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"DateOrDatetime/","text":"Type: DateOrDatetime Either a date or a datetime URI: linkml:DateOrDatetime base : str uri : linkml:DateOrDatetime repr : str Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam","title":"Type: DateOrDatetime"},{"location":"DateOrDatetime/#type-dateordatetime","text":"Either a date or a datetime URI: linkml:DateOrDatetime base : str uri : linkml:DateOrDatetime repr : str","title":"Type: DateOrDatetime"},{"location":"DateOrDatetime/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"DateOrDatetime/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"Datetime/","text":"Type: Datetime The combination of a date and time URI: xsd:dateTime base : XSDDateTime uri : xsd:dateTime repr : str Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam","title":"Type: Datetime"},{"location":"Datetime/#type-datetime","text":"The combination of a date and time URI: xsd:dateTime base : XSDDateTime uri : xsd:dateTime repr : str","title":"Type: Datetime"},{"location":"Datetime/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Datetime/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"Decimal/","text":"Type: Decimal A real number with arbitrary precision that conforms to the xsd:decimal specification URI: xsd:decimal base : Decimal uri : xsd:decimal Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam","title":"Type: Decimal"},{"location":"Decimal/#type-decimal","text":"A real number with arbitrary precision that conforms to the xsd:decimal specification URI: xsd:decimal base : Decimal uri : xsd:decimal","title":"Type: Decimal"},{"location":"Decimal/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Decimal/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"Double/","text":"Type: Double A real number that conforms to the xsd:double specification URI: xsd:double base : float uri : xsd:double Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam","title":"Type: Double"},{"location":"Double/#type-double","text":"A real number that conforms to the xsd:double specification URI: xsd:double base : float uri : xsd:double","title":"Type: Double"},{"location":"Double/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Double/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"EnabledByAssociation/","text":"Class: EnabledByAssociation An association between an activity and the gene product or complex that carries it out NOTE : this is an abstract class and should not be instantiated directly URI: gocam:EnabledByAssociation classDiagram class EnabledByAssociation click EnabledByAssociation href \"../EnabledByAssociation\" Association <|-- EnabledByAssociation click Association href \"../Association\" EnabledByAssociation <|-- EnabledByGeneProductAssociation click EnabledByGeneProductAssociation href \"../EnabledByGeneProductAssociation\" EnabledByAssociation <|-- EnabledByProteinComplexAssociation click EnabledByProteinComplexAssociation href \"../EnabledByProteinComplexAssociation\" EnabledByAssociation : evidence EnabledByAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" EnabledByAssociation : provenances EnabledByAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" EnabledByAssociation : term EnabledByAssociation --> \"0..1\" InformationBiomacromoleculeTermObject : term click InformationBiomacromoleculeTermObject href \"../InformationBiomacromoleculeTermObject\" EnabledByAssociation : type Inheritance Association EnabledByAssociation EnabledByGeneProductAssociation EnabledByProteinComplexAssociation Slots Name Cardinality and Range Description Inheritance term 0..1 InformationBiomacromoleculeTermObject The gene product or complex that carries out the activity direct type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association Usages used by used in type used Activity enabled_by range EnabledByAssociation Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:EnabledByAssociation native gocam:EnabledByAssociation LinkML Source Direct name: EnabledByAssociation description: An association between an activity and the gene product or complex that carries it out from_schema: https://w3id.org/gocam is_a: Association abstract: true attributes: term: name: term description: The gene product or complex that carries out the activity from_schema: https://w3id.org/gocam domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: InformationBiomacromoleculeTermObject Induced name: EnabledByAssociation description: An association between an activity and the gene product or complex that carries it out from_schema: https://w3id.org/gocam is_a: Association abstract: true attributes: term: name: term description: The gene product or complex that carries out the activity from_schema: https://w3id.org/gocam alias: term owner: EnabledByAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: InformationBiomacromoleculeTermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: EnabledByAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: EnabledByAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: EnabledByAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Class: EnabledByAssociation"},{"location":"EnabledByAssociation/#class-enabledbyassociation","text":"An association between an activity and the gene product or complex that carries it out NOTE : this is an abstract class and should not be instantiated directly URI: gocam:EnabledByAssociation classDiagram class EnabledByAssociation click EnabledByAssociation href \"../EnabledByAssociation\" Association <|-- EnabledByAssociation click Association href \"../Association\" EnabledByAssociation <|-- EnabledByGeneProductAssociation click EnabledByGeneProductAssociation href \"../EnabledByGeneProductAssociation\" EnabledByAssociation <|-- EnabledByProteinComplexAssociation click EnabledByProteinComplexAssociation href \"../EnabledByProteinComplexAssociation\" EnabledByAssociation : evidence EnabledByAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" EnabledByAssociation : provenances EnabledByAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" EnabledByAssociation : term EnabledByAssociation --> \"0..1\" InformationBiomacromoleculeTermObject : term click InformationBiomacromoleculeTermObject href \"../InformationBiomacromoleculeTermObject\" EnabledByAssociation : type","title":"Class: EnabledByAssociation"},{"location":"EnabledByAssociation/#inheritance","text":"Association EnabledByAssociation EnabledByGeneProductAssociation EnabledByProteinComplexAssociation","title":"Inheritance"},{"location":"EnabledByAssociation/#slots","text":"Name Cardinality and Range Description Inheritance term 0..1 InformationBiomacromoleculeTermObject The gene product or complex that carries out the activity direct type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association","title":"Slots"},{"location":"EnabledByAssociation/#usages","text":"used by used in type used Activity enabled_by range EnabledByAssociation","title":"Usages"},{"location":"EnabledByAssociation/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"EnabledByAssociation/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"EnabledByAssociation/#mappings","text":"Mapping Type Mapped Value self gocam:EnabledByAssociation native gocam:EnabledByAssociation","title":"Mappings"},{"location":"EnabledByAssociation/#linkml-source","text":"","title":"LinkML Source"},{"location":"EnabledByAssociation/#direct","text":"name: EnabledByAssociation description: An association between an activity and the gene product or complex that carries it out from_schema: https://w3id.org/gocam is_a: Association abstract: true attributes: term: name: term description: The gene product or complex that carries out the activity from_schema: https://w3id.org/gocam domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: InformationBiomacromoleculeTermObject","title":"Direct"},{"location":"EnabledByAssociation/#induced","text":"name: EnabledByAssociation description: An association between an activity and the gene product or complex that carries it out from_schema: https://w3id.org/gocam is_a: Association abstract: true attributes: term: name: term description: The gene product or complex that carries out the activity from_schema: https://w3id.org/gocam alias: term owner: EnabledByAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: InformationBiomacromoleculeTermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: EnabledByAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: EnabledByAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: EnabledByAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Induced"},{"location":"EnabledByGeneProductAssociation/","text":"Class: EnabledByGeneProductAssociation An association between an activity and a gene product URI: gocam:EnabledByGeneProductAssociation classDiagram class EnabledByGeneProductAssociation click EnabledByGeneProductAssociation href \"../EnabledByGeneProductAssociation\" EnabledByAssociation <|-- EnabledByGeneProductAssociation click EnabledByAssociation href \"../EnabledByAssociation\" EnabledByGeneProductAssociation : evidence EnabledByGeneProductAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" EnabledByGeneProductAssociation : provenances EnabledByGeneProductAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" EnabledByGeneProductAssociation : term EnabledByGeneProductAssociation --> \"0..1\" GeneProductTermObject : term click GeneProductTermObject href \"../GeneProductTermObject\" EnabledByGeneProductAssociation : type Inheritance Association EnabledByAssociation EnabledByGeneProductAssociation Slots Name Cardinality and Range Description Inheritance term 0..1 GeneProductTermObject The gene product or complex that carries out the activity EnabledByAssociation type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:EnabledByGeneProductAssociation native gocam:EnabledByGeneProductAssociation LinkML Source Direct name: EnabledByGeneProductAssociation description: An association between an activity and a gene product from_schema: https://w3id.org/gocam is_a: EnabledByAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: GeneProductTermObject Induced name: EnabledByGeneProductAssociation description: An association between an activity and a gene product from_schema: https://w3id.org/gocam is_a: EnabledByAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: GeneProductTermObject attributes: term: name: term description: The gene product or complex that carries out the activity from_schema: https://w3id.org/gocam alias: term owner: EnabledByGeneProductAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: GeneProductTermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: EnabledByGeneProductAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: EnabledByGeneProductAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: EnabledByGeneProductAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Class: EnabledByGeneProductAssociation"},{"location":"EnabledByGeneProductAssociation/#class-enabledbygeneproductassociation","text":"An association between an activity and a gene product URI: gocam:EnabledByGeneProductAssociation classDiagram class EnabledByGeneProductAssociation click EnabledByGeneProductAssociation href \"../EnabledByGeneProductAssociation\" EnabledByAssociation <|-- EnabledByGeneProductAssociation click EnabledByAssociation href \"../EnabledByAssociation\" EnabledByGeneProductAssociation : evidence EnabledByGeneProductAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" EnabledByGeneProductAssociation : provenances EnabledByGeneProductAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" EnabledByGeneProductAssociation : term EnabledByGeneProductAssociation --> \"0..1\" GeneProductTermObject : term click GeneProductTermObject href \"../GeneProductTermObject\" EnabledByGeneProductAssociation : type","title":"Class: EnabledByGeneProductAssociation"},{"location":"EnabledByGeneProductAssociation/#inheritance","text":"Association EnabledByAssociation EnabledByGeneProductAssociation","title":"Inheritance"},{"location":"EnabledByGeneProductAssociation/#slots","text":"Name Cardinality and Range Description Inheritance term 0..1 GeneProductTermObject The gene product or complex that carries out the activity EnabledByAssociation type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association","title":"Slots"},{"location":"EnabledByGeneProductAssociation/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"EnabledByGeneProductAssociation/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"EnabledByGeneProductAssociation/#mappings","text":"Mapping Type Mapped Value self gocam:EnabledByGeneProductAssociation native gocam:EnabledByGeneProductAssociation","title":"Mappings"},{"location":"EnabledByGeneProductAssociation/#linkml-source","text":"","title":"LinkML Source"},{"location":"EnabledByGeneProductAssociation/#direct","text":"name: EnabledByGeneProductAssociation description: An association between an activity and a gene product from_schema: https://w3id.org/gocam is_a: EnabledByAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: GeneProductTermObject","title":"Direct"},{"location":"EnabledByGeneProductAssociation/#induced","text":"name: EnabledByGeneProductAssociation description: An association between an activity and a gene product from_schema: https://w3id.org/gocam is_a: EnabledByAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: GeneProductTermObject attributes: term: name: term description: The gene product or complex that carries out the activity from_schema: https://w3id.org/gocam alias: term owner: EnabledByGeneProductAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: GeneProductTermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: EnabledByGeneProductAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: EnabledByGeneProductAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: EnabledByGeneProductAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Induced"},{"location":"EnabledByProteinComplexAssociation/","text":"Class: EnabledByProteinComplexAssociation An association between an activity and a protein complex URI: gocam:EnabledByProteinComplexAssociation classDiagram class EnabledByProteinComplexAssociation click EnabledByProteinComplexAssociation href \"../EnabledByProteinComplexAssociation\" EnabledByAssociation <|-- EnabledByProteinComplexAssociation click EnabledByAssociation href \"../EnabledByAssociation\" EnabledByProteinComplexAssociation : evidence EnabledByProteinComplexAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" EnabledByProteinComplexAssociation : members EnabledByProteinComplexAssociation --> \"*\" GeneProductTermObject : members click GeneProductTermObject href \"../GeneProductTermObject\" EnabledByProteinComplexAssociation : provenances EnabledByProteinComplexAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" EnabledByProteinComplexAssociation : term EnabledByProteinComplexAssociation --> \"0..1\" ProteinComplexTermObject : term click ProteinComplexTermObject href \"../ProteinComplexTermObject\" EnabledByProteinComplexAssociation : type Inheritance Association EnabledByAssociation EnabledByProteinComplexAssociation Slots Name Cardinality and Range Description Inheritance members * GeneProductTermObject The gene products that are part of the complex direct term 0..1 ProteinComplexTermObject The gene product or complex that carries out the activity EnabledByAssociation type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:EnabledByProteinComplexAssociation native gocam:EnabledByProteinComplexAssociation LinkML Source Direct name: EnabledByProteinComplexAssociation description: An association between an activity and a protein complex from_schema: https://w3id.org/gocam is_a: EnabledByAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: ProteinComplexTermObject attributes: members: name: members description: The gene products that are part of the complex from_schema: https://w3id.org/gocam rank: 1000 multivalued: true domain_of: - EnabledByProteinComplexAssociation range: GeneProductTermObject Induced name: EnabledByProteinComplexAssociation description: An association between an activity and a protein complex from_schema: https://w3id.org/gocam is_a: EnabledByAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: ProteinComplexTermObject attributes: members: name: members description: The gene products that are part of the complex from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: members owner: EnabledByProteinComplexAssociation domain_of: - EnabledByProteinComplexAssociation range: GeneProductTermObject term: name: term description: The gene product or complex that carries out the activity from_schema: https://w3id.org/gocam alias: term owner: EnabledByProteinComplexAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: ProteinComplexTermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: EnabledByProteinComplexAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: EnabledByProteinComplexAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: EnabledByProteinComplexAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Class: EnabledByProteinComplexAssociation"},{"location":"EnabledByProteinComplexAssociation/#class-enabledbyproteincomplexassociation","text":"An association between an activity and a protein complex URI: gocam:EnabledByProteinComplexAssociation classDiagram class EnabledByProteinComplexAssociation click EnabledByProteinComplexAssociation href \"../EnabledByProteinComplexAssociation\" EnabledByAssociation <|-- EnabledByProteinComplexAssociation click EnabledByAssociation href \"../EnabledByAssociation\" EnabledByProteinComplexAssociation : evidence EnabledByProteinComplexAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" EnabledByProteinComplexAssociation : members EnabledByProteinComplexAssociation --> \"*\" GeneProductTermObject : members click GeneProductTermObject href \"../GeneProductTermObject\" EnabledByProteinComplexAssociation : provenances EnabledByProteinComplexAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" EnabledByProteinComplexAssociation : term EnabledByProteinComplexAssociation --> \"0..1\" ProteinComplexTermObject : term click ProteinComplexTermObject href \"../ProteinComplexTermObject\" EnabledByProteinComplexAssociation : type","title":"Class: EnabledByProteinComplexAssociation"},{"location":"EnabledByProteinComplexAssociation/#inheritance","text":"Association EnabledByAssociation EnabledByProteinComplexAssociation","title":"Inheritance"},{"location":"EnabledByProteinComplexAssociation/#slots","text":"Name Cardinality and Range Description Inheritance members * GeneProductTermObject The gene products that are part of the complex direct term 0..1 ProteinComplexTermObject The gene product or complex that carries out the activity EnabledByAssociation type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association","title":"Slots"},{"location":"EnabledByProteinComplexAssociation/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"EnabledByProteinComplexAssociation/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"EnabledByProteinComplexAssociation/#mappings","text":"Mapping Type Mapped Value self gocam:EnabledByProteinComplexAssociation native gocam:EnabledByProteinComplexAssociation","title":"Mappings"},{"location":"EnabledByProteinComplexAssociation/#linkml-source","text":"","title":"LinkML Source"},{"location":"EnabledByProteinComplexAssociation/#direct","text":"name: EnabledByProteinComplexAssociation description: An association between an activity and a protein complex from_schema: https://w3id.org/gocam is_a: EnabledByAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: ProteinComplexTermObject attributes: members: name: members description: The gene products that are part of the complex from_schema: https://w3id.org/gocam rank: 1000 multivalued: true domain_of: - EnabledByProteinComplexAssociation range: GeneProductTermObject","title":"Direct"},{"location":"EnabledByProteinComplexAssociation/#induced","text":"name: EnabledByProteinComplexAssociation description: An association between an activity and a protein complex from_schema: https://w3id.org/gocam is_a: EnabledByAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: ProteinComplexTermObject attributes: members: name: members description: The gene products that are part of the complex from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: members owner: EnabledByProteinComplexAssociation domain_of: - EnabledByProteinComplexAssociation range: GeneProductTermObject term: name: term description: The gene product or complex that carries out the activity from_schema: https://w3id.org/gocam alias: term owner: EnabledByProteinComplexAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: ProteinComplexTermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: EnabledByProteinComplexAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: EnabledByProteinComplexAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: EnabledByProteinComplexAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Induced"},{"location":"EvidenceItem/","text":"Class: EvidenceItem An individual piece of evidence that is associated with an assertion in a model URI: gocam:EvidenceItem classDiagram class EvidenceItem click EvidenceItem href \"../EvidenceItem\" EvidenceItem : provenances EvidenceItem --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" EvidenceItem : reference EvidenceItem --> \"0..1\" PublicationObject : reference click PublicationObject href \"../PublicationObject\" EvidenceItem : term EvidenceItem --> \"0..1\" EvidenceTermObject : term click EvidenceTermObject href \"../EvidenceTermObject\" EvidenceItem : with_objects EvidenceItem --> \"*\" Object : with_objects click Object href \"../Object\" Slots Name Cardinality and Range Description Inheritance term 0..1 EvidenceTermObject The ECO term representing the type of evidence direct reference 0..1 PublicationObject The publication of reference that describes the evidence direct with_objects * Object Supporting database entities or terms direct provenances * ProvenanceInfo Provenance about the assertion, e direct Usages used by used in type used Association evidence range EvidenceItem EnabledByAssociation evidence range EvidenceItem EnabledByGeneProductAssociation evidence range EvidenceItem EnabledByProteinComplexAssociation evidence range EvidenceItem CausalAssociation evidence range EvidenceItem TermAssociation evidence range EvidenceItem MolecularFunctionAssociation evidence range EvidenceItem BiologicalProcessAssociation evidence range EvidenceItem CellularAnatomicalEntityAssociation evidence range EvidenceItem CellTypeAssociation evidence range EvidenceItem GrossAnatomyAssociation evidence range EvidenceItem MoleculeAssociation evidence range EvidenceItem Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:EvidenceItem native gocam:EvidenceItem LinkML Source Direct name: EvidenceItem description: An individual piece of evidence that is associated with an assertion in a model from_schema: https://w3id.org/gocam attributes: term: name: term description: The ECO term representing the type of evidence from_schema: https://w3id.org/gocam rank: 1000 domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: EvidenceTermObject reference: name: reference description: The publication of reference that describes the evidence from_schema: https://w3id.org/gocam rank: 1000 domain_of: - EvidenceItem range: PublicationObject with_objects: name: with_objects description: Supporting database entities or terms from_schema: https://w3id.org/gocam aliases: - with - with/from rank: 1000 multivalued: true domain_of: - EvidenceItem range: Object provenances: name: provenances description: Provenance about the assertion, e.g. who made it from_schema: https://w3id.org/gocam multivalued: true domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true Induced name: EvidenceItem description: An individual piece of evidence that is associated with an assertion in a model from_schema: https://w3id.org/gocam attributes: term: name: term description: The ECO term representing the type of evidence from_schema: https://w3id.org/gocam rank: 1000 alias: term owner: EvidenceItem domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: EvidenceTermObject reference: name: reference description: The publication of reference that describes the evidence from_schema: https://w3id.org/gocam rank: 1000 alias: reference owner: EvidenceItem domain_of: - EvidenceItem range: PublicationObject with_objects: name: with_objects description: Supporting database entities or terms from_schema: https://w3id.org/gocam aliases: - with - with/from rank: 1000 multivalued: true alias: with_objects owner: EvidenceItem domain_of: - EvidenceItem range: Object provenances: name: provenances description: Provenance about the assertion, e.g. who made it from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: EvidenceItem domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Class: EvidenceItem"},{"location":"EvidenceItem/#class-evidenceitem","text":"An individual piece of evidence that is associated with an assertion in a model URI: gocam:EvidenceItem classDiagram class EvidenceItem click EvidenceItem href \"../EvidenceItem\" EvidenceItem : provenances EvidenceItem --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" EvidenceItem : reference EvidenceItem --> \"0..1\" PublicationObject : reference click PublicationObject href \"../PublicationObject\" EvidenceItem : term EvidenceItem --> \"0..1\" EvidenceTermObject : term click EvidenceTermObject href \"../EvidenceTermObject\" EvidenceItem : with_objects EvidenceItem --> \"*\" Object : with_objects click Object href \"../Object\"","title":"Class: EvidenceItem"},{"location":"EvidenceItem/#slots","text":"Name Cardinality and Range Description Inheritance term 0..1 EvidenceTermObject The ECO term representing the type of evidence direct reference 0..1 PublicationObject The publication of reference that describes the evidence direct with_objects * Object Supporting database entities or terms direct provenances * ProvenanceInfo Provenance about the assertion, e direct","title":"Slots"},{"location":"EvidenceItem/#usages","text":"used by used in type used Association evidence range EvidenceItem EnabledByAssociation evidence range EvidenceItem EnabledByGeneProductAssociation evidence range EvidenceItem EnabledByProteinComplexAssociation evidence range EvidenceItem CausalAssociation evidence range EvidenceItem TermAssociation evidence range EvidenceItem MolecularFunctionAssociation evidence range EvidenceItem BiologicalProcessAssociation evidence range EvidenceItem CellularAnatomicalEntityAssociation evidence range EvidenceItem CellTypeAssociation evidence range EvidenceItem GrossAnatomyAssociation evidence range EvidenceItem MoleculeAssociation evidence range EvidenceItem","title":"Usages"},{"location":"EvidenceItem/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"EvidenceItem/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"EvidenceItem/#mappings","text":"Mapping Type Mapped Value self gocam:EvidenceItem native gocam:EvidenceItem","title":"Mappings"},{"location":"EvidenceItem/#linkml-source","text":"","title":"LinkML Source"},{"location":"EvidenceItem/#direct","text":"name: EvidenceItem description: An individual piece of evidence that is associated with an assertion in a model from_schema: https://w3id.org/gocam attributes: term: name: term description: The ECO term representing the type of evidence from_schema: https://w3id.org/gocam rank: 1000 domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: EvidenceTermObject reference: name: reference description: The publication of reference that describes the evidence from_schema: https://w3id.org/gocam rank: 1000 domain_of: - EvidenceItem range: PublicationObject with_objects: name: with_objects description: Supporting database entities or terms from_schema: https://w3id.org/gocam aliases: - with - with/from rank: 1000 multivalued: true domain_of: - EvidenceItem range: Object provenances: name: provenances description: Provenance about the assertion, e.g. who made it from_schema: https://w3id.org/gocam multivalued: true domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Direct"},{"location":"EvidenceItem/#induced","text":"name: EvidenceItem description: An individual piece of evidence that is associated with an assertion in a model from_schema: https://w3id.org/gocam attributes: term: name: term description: The ECO term representing the type of evidence from_schema: https://w3id.org/gocam rank: 1000 alias: term owner: EvidenceItem domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: EvidenceTermObject reference: name: reference description: The publication of reference that describes the evidence from_schema: https://w3id.org/gocam rank: 1000 alias: reference owner: EvidenceItem domain_of: - EvidenceItem range: PublicationObject with_objects: name: with_objects description: Supporting database entities or terms from_schema: https://w3id.org/gocam aliases: - with - with/from rank: 1000 multivalued: true alias: with_objects owner: EvidenceItem domain_of: - EvidenceItem range: Object provenances: name: provenances description: Provenance about the assertion, e.g. who made it from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: EvidenceItem domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Induced"},{"location":"EvidenceTermObject/","text":"Class: EvidenceTermObject A term object that represents an evidence term from ECO URI: gocam:EvidenceTermObject classDiagram class EvidenceTermObject click EvidenceTermObject href \"../EvidenceTermObject\" TermObject <|-- EvidenceTermObject click TermObject href \"../TermObject\" EvidenceTermObject : id EvidenceTermObject : label EvidenceTermObject : obsolete EvidenceTermObject : type Inheritance Object TermObject EvidenceTermObject Slots Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object Usages used by used in type used EvidenceItem term range EvidenceTermObject Identifier and Mapping Information Valid ID Prefixes Instances of this class should have identifiers with one of the following prefixes: ECO Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:EvidenceTermObject native gocam:EvidenceTermObject LinkML Source Direct name: EvidenceTermObject id_prefixes: - ECO description: A term object that represents an evidence term from ECO from_schema: https://w3id.org/gocam is_a: TermObject Induced name: EvidenceTermObject id_prefixes: - ECO description: A term object that represents an evidence term from ECO from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: EvidenceTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: EvidenceTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: EvidenceTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: EvidenceTermObject domain_of: - Object range: boolean","title":"Class: EvidenceTermObject"},{"location":"EvidenceTermObject/#class-evidencetermobject","text":"A term object that represents an evidence term from ECO URI: gocam:EvidenceTermObject classDiagram class EvidenceTermObject click EvidenceTermObject href \"../EvidenceTermObject\" TermObject <|-- EvidenceTermObject click TermObject href \"../TermObject\" EvidenceTermObject : id EvidenceTermObject : label EvidenceTermObject : obsolete EvidenceTermObject : type","title":"Class: EvidenceTermObject"},{"location":"EvidenceTermObject/#inheritance","text":"Object TermObject EvidenceTermObject","title":"Inheritance"},{"location":"EvidenceTermObject/#slots","text":"Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object","title":"Slots"},{"location":"EvidenceTermObject/#usages","text":"used by used in type used EvidenceItem term range EvidenceTermObject","title":"Usages"},{"location":"EvidenceTermObject/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"EvidenceTermObject/#valid-id-prefixes","text":"Instances of this class should have identifiers with one of the following prefixes: ECO","title":"Valid ID Prefixes"},{"location":"EvidenceTermObject/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"EvidenceTermObject/#mappings","text":"Mapping Type Mapped Value self gocam:EvidenceTermObject native gocam:EvidenceTermObject","title":"Mappings"},{"location":"EvidenceTermObject/#linkml-source","text":"","title":"LinkML Source"},{"location":"EvidenceTermObject/#direct","text":"name: EvidenceTermObject id_prefixes: - ECO description: A term object that represents an evidence term from ECO from_schema: https://w3id.org/gocam is_a: TermObject","title":"Direct"},{"location":"EvidenceTermObject/#induced","text":"name: EvidenceTermObject id_prefixes: - ECO description: A term object that represents an evidence term from ECO from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: EvidenceTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: EvidenceTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: EvidenceTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: EvidenceTermObject domain_of: - Object range: boolean","title":"Induced"},{"location":"Float/","text":"Type: Float A real number that conforms to the xsd:float specification URI: xsd:float base : float uri : xsd:float Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam","title":"Type: Float"},{"location":"Float/#type-float","text":"A real number that conforms to the xsd:float specification URI: xsd:float base : float uri : xsd:float","title":"Type: Float"},{"location":"Float/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Float/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"GeneProductTermObject/","text":"Class: GeneProductTermObject A term object that represents a gene product term from GO or UniProtKB URI: gocam:GeneProductTermObject classDiagram class GeneProductTermObject click GeneProductTermObject href \"../GeneProductTermObject\" InformationBiomacromoleculeTermObject <|-- GeneProductTermObject click InformationBiomacromoleculeTermObject href \"../InformationBiomacromoleculeTermObject\" GeneProductTermObject : id GeneProductTermObject : label GeneProductTermObject : obsolete GeneProductTermObject : type Inheritance Object TermObject InformationBiomacromoleculeTermObject GeneProductTermObject Slots Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object Usages used by used in type used EnabledByGeneProductAssociation term range GeneProductTermObject EnabledByProteinComplexAssociation members range GeneProductTermObject Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:GeneProductTermObject native gocam:GeneProductTermObject LinkML Source Direct name: GeneProductTermObject description: A term object that represents a gene product term from GO or UniProtKB from_schema: https://w3id.org/gocam is_a: InformationBiomacromoleculeTermObject Induced name: GeneProductTermObject description: A term object that represents a gene product term from GO or UniProtKB from_schema: https://w3id.org/gocam is_a: InformationBiomacromoleculeTermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: GeneProductTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: GeneProductTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: GeneProductTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: GeneProductTermObject domain_of: - Object range: boolean","title":"Class: GeneProductTermObject"},{"location":"GeneProductTermObject/#class-geneproducttermobject","text":"A term object that represents a gene product term from GO or UniProtKB URI: gocam:GeneProductTermObject classDiagram class GeneProductTermObject click GeneProductTermObject href \"../GeneProductTermObject\" InformationBiomacromoleculeTermObject <|-- GeneProductTermObject click InformationBiomacromoleculeTermObject href \"../InformationBiomacromoleculeTermObject\" GeneProductTermObject : id GeneProductTermObject : label GeneProductTermObject : obsolete GeneProductTermObject : type","title":"Class: GeneProductTermObject"},{"location":"GeneProductTermObject/#inheritance","text":"Object TermObject InformationBiomacromoleculeTermObject GeneProductTermObject","title":"Inheritance"},{"location":"GeneProductTermObject/#slots","text":"Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object","title":"Slots"},{"location":"GeneProductTermObject/#usages","text":"used by used in type used EnabledByGeneProductAssociation term range GeneProductTermObject EnabledByProteinComplexAssociation members range GeneProductTermObject","title":"Usages"},{"location":"GeneProductTermObject/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"GeneProductTermObject/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"GeneProductTermObject/#mappings","text":"Mapping Type Mapped Value self gocam:GeneProductTermObject native gocam:GeneProductTermObject","title":"Mappings"},{"location":"GeneProductTermObject/#linkml-source","text":"","title":"LinkML Source"},{"location":"GeneProductTermObject/#direct","text":"name: GeneProductTermObject description: A term object that represents a gene product term from GO or UniProtKB from_schema: https://w3id.org/gocam is_a: InformationBiomacromoleculeTermObject","title":"Direct"},{"location":"GeneProductTermObject/#induced","text":"name: GeneProductTermObject description: A term object that represents a gene product term from GO or UniProtKB from_schema: https://w3id.org/gocam is_a: InformationBiomacromoleculeTermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: GeneProductTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: GeneProductTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: GeneProductTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: GeneProductTermObject domain_of: - Object range: boolean","title":"Induced"},{"location":"GrossAnatomicalStructureTermObject/","text":"Class: GrossAnatomicalStructureTermObject A term object that represents a gross anatomical structure term from UBERON URI: gocam:GrossAnatomicalStructureTermObject classDiagram class GrossAnatomicalStructureTermObject click GrossAnatomicalStructureTermObject href \"../GrossAnatomicalStructureTermObject\" TermObject <|-- GrossAnatomicalStructureTermObject click TermObject href \"../TermObject\" GrossAnatomicalStructureTermObject : id GrossAnatomicalStructureTermObject : label GrossAnatomicalStructureTermObject : obsolete GrossAnatomicalStructureTermObject : type Inheritance Object TermObject GrossAnatomicalStructureTermObject Slots Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object Usages used by used in type used GrossAnatomyAssociation term range GrossAnatomicalStructureTermObject Identifier and Mapping Information Valid ID Prefixes Instances of this class should have identifiers with one of the following prefixes: UBERON PO FAO DDANAT Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:GrossAnatomicalStructureTermObject native gocam:GrossAnatomicalStructureTermObject LinkML Source Direct name: GrossAnatomicalStructureTermObject id_prefixes: - UBERON - PO - FAO - DDANAT description: A term object that represents a gross anatomical structure term from UBERON from_schema: https://w3id.org/gocam is_a: TermObject Induced name: GrossAnatomicalStructureTermObject id_prefixes: - UBERON - PO - FAO - DDANAT description: A term object that represents a gross anatomical structure term from UBERON from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: GrossAnatomicalStructureTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: GrossAnatomicalStructureTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: GrossAnatomicalStructureTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: GrossAnatomicalStructureTermObject domain_of: - Object range: boolean","title":"Class: GrossAnatomicalStructureTermObject"},{"location":"GrossAnatomicalStructureTermObject/#class-grossanatomicalstructuretermobject","text":"A term object that represents a gross anatomical structure term from UBERON URI: gocam:GrossAnatomicalStructureTermObject classDiagram class GrossAnatomicalStructureTermObject click GrossAnatomicalStructureTermObject href \"../GrossAnatomicalStructureTermObject\" TermObject <|-- GrossAnatomicalStructureTermObject click TermObject href \"../TermObject\" GrossAnatomicalStructureTermObject : id GrossAnatomicalStructureTermObject : label GrossAnatomicalStructureTermObject : obsolete GrossAnatomicalStructureTermObject : type","title":"Class: GrossAnatomicalStructureTermObject"},{"location":"GrossAnatomicalStructureTermObject/#inheritance","text":"Object TermObject GrossAnatomicalStructureTermObject","title":"Inheritance"},{"location":"GrossAnatomicalStructureTermObject/#slots","text":"Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object","title":"Slots"},{"location":"GrossAnatomicalStructureTermObject/#usages","text":"used by used in type used GrossAnatomyAssociation term range GrossAnatomicalStructureTermObject","title":"Usages"},{"location":"GrossAnatomicalStructureTermObject/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"GrossAnatomicalStructureTermObject/#valid-id-prefixes","text":"Instances of this class should have identifiers with one of the following prefixes: UBERON PO FAO DDANAT","title":"Valid ID Prefixes"},{"location":"GrossAnatomicalStructureTermObject/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"GrossAnatomicalStructureTermObject/#mappings","text":"Mapping Type Mapped Value self gocam:GrossAnatomicalStructureTermObject native gocam:GrossAnatomicalStructureTermObject","title":"Mappings"},{"location":"GrossAnatomicalStructureTermObject/#linkml-source","text":"","title":"LinkML Source"},{"location":"GrossAnatomicalStructureTermObject/#direct","text":"name: GrossAnatomicalStructureTermObject id_prefixes: - UBERON - PO - FAO - DDANAT description: A term object that represents a gross anatomical structure term from UBERON from_schema: https://w3id.org/gocam is_a: TermObject","title":"Direct"},{"location":"GrossAnatomicalStructureTermObject/#induced","text":"name: GrossAnatomicalStructureTermObject id_prefixes: - UBERON - PO - FAO - DDANAT description: A term object that represents a gross anatomical structure term from UBERON from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: GrossAnatomicalStructureTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: GrossAnatomicalStructureTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: GrossAnatomicalStructureTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: GrossAnatomicalStructureTermObject domain_of: - Object range: boolean","title":"Induced"},{"location":"GrossAnatomyAssociation/","text":"Class: GrossAnatomyAssociation An association between an activity and a gross anatomical structure term URI: gocam:GrossAnatomyAssociation classDiagram class GrossAnatomyAssociation click GrossAnatomyAssociation href \"../GrossAnatomyAssociation\" TermAssociation <|-- GrossAnatomyAssociation click TermAssociation href \"../TermAssociation\" GrossAnatomyAssociation : evidence GrossAnatomyAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" GrossAnatomyAssociation : provenances GrossAnatomyAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" GrossAnatomyAssociation : term GrossAnatomyAssociation --> \"0..1\" GrossAnatomicalStructureTermObject : term click GrossAnatomicalStructureTermObject href \"../GrossAnatomicalStructureTermObject\" GrossAnatomyAssociation : type Inheritance Association TermAssociation GrossAnatomyAssociation Slots Name Cardinality and Range Description Inheritance term 0..1 GrossAnatomicalStructureTermObject The ontology term that describes the nature of the association TermAssociation type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:GrossAnatomyAssociation native gocam:GrossAnatomyAssociation LinkML Source Direct name: GrossAnatomyAssociation description: An association between an activity and a gross anatomical structure term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: GrossAnatomicalStructureTermObject part_of: name: part_of range: GrossAnatomyAssociation Induced name: GrossAnatomyAssociation description: An association between an activity and a gross anatomical structure term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: GrossAnatomicalStructureTermObject part_of: name: part_of range: GrossAnatomyAssociation attributes: term: name: term description: The ontology term that describes the nature of the association from_schema: https://w3id.org/gocam alias: term owner: GrossAnatomyAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: GrossAnatomicalStructureTermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: GrossAnatomyAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: GrossAnatomyAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: GrossAnatomyAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Class: GrossAnatomyAssociation"},{"location":"GrossAnatomyAssociation/#class-grossanatomyassociation","text":"An association between an activity and a gross anatomical structure term URI: gocam:GrossAnatomyAssociation classDiagram class GrossAnatomyAssociation click GrossAnatomyAssociation href \"../GrossAnatomyAssociation\" TermAssociation <|-- GrossAnatomyAssociation click TermAssociation href \"../TermAssociation\" GrossAnatomyAssociation : evidence GrossAnatomyAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" GrossAnatomyAssociation : provenances GrossAnatomyAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" GrossAnatomyAssociation : term GrossAnatomyAssociation --> \"0..1\" GrossAnatomicalStructureTermObject : term click GrossAnatomicalStructureTermObject href \"../GrossAnatomicalStructureTermObject\" GrossAnatomyAssociation : type","title":"Class: GrossAnatomyAssociation"},{"location":"GrossAnatomyAssociation/#inheritance","text":"Association TermAssociation GrossAnatomyAssociation","title":"Inheritance"},{"location":"GrossAnatomyAssociation/#slots","text":"Name Cardinality and Range Description Inheritance term 0..1 GrossAnatomicalStructureTermObject The ontology term that describes the nature of the association TermAssociation type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association","title":"Slots"},{"location":"GrossAnatomyAssociation/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"GrossAnatomyAssociation/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"GrossAnatomyAssociation/#mappings","text":"Mapping Type Mapped Value self gocam:GrossAnatomyAssociation native gocam:GrossAnatomyAssociation","title":"Mappings"},{"location":"GrossAnatomyAssociation/#linkml-source","text":"","title":"LinkML Source"},{"location":"GrossAnatomyAssociation/#direct","text":"name: GrossAnatomyAssociation description: An association between an activity and a gross anatomical structure term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: GrossAnatomicalStructureTermObject part_of: name: part_of range: GrossAnatomyAssociation","title":"Direct"},{"location":"GrossAnatomyAssociation/#induced","text":"name: GrossAnatomyAssociation description: An association between an activity and a gross anatomical structure term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: GrossAnatomicalStructureTermObject part_of: name: part_of range: GrossAnatomyAssociation attributes: term: name: term description: The ontology term that describes the nature of the association from_schema: https://w3id.org/gocam alias: term owner: GrossAnatomyAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: GrossAnatomicalStructureTermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: GrossAnatomyAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: GrossAnatomyAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: GrossAnatomyAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Induced"},{"location":"InformationBiomacromoleculeCategory/","text":"Enum: InformationBiomacromoleculeCategory URI: InformationBiomacromoleculeCategory Permissible Values Value Meaning Description GeneOrReferenceProtein biolink.GeneOrGeneProduct ProteinIsoform None MacromolecularComplex None Unknown None Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam LinkML Source name: InformationBiomacromoleculeCategory from_schema: https://w3id.org/gocam rank: 1000 permissible_values: GeneOrReferenceProtein: text: GeneOrReferenceProtein meaning: biolink.GeneOrGeneProduct ProteinIsoform: text: ProteinIsoform MacromolecularComplex: text: MacromolecularComplex Unknown: text: Unknown","title":"Enum: InformationBiomacromoleculeCategory"},{"location":"InformationBiomacromoleculeCategory/#enum-informationbiomacromoleculecategory","text":"URI: InformationBiomacromoleculeCategory","title":"Enum: InformationBiomacromoleculeCategory"},{"location":"InformationBiomacromoleculeCategory/#permissible-values","text":"Value Meaning Description GeneOrReferenceProtein biolink.GeneOrGeneProduct ProteinIsoform None MacromolecularComplex None Unknown None","title":"Permissible Values"},{"location":"InformationBiomacromoleculeCategory/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"InformationBiomacromoleculeCategory/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"InformationBiomacromoleculeCategory/#linkml-source","text":"name: InformationBiomacromoleculeCategory from_schema: https://w3id.org/gocam rank: 1000 permissible_values: GeneOrReferenceProtein: text: GeneOrReferenceProtein meaning: biolink.GeneOrGeneProduct ProteinIsoform: text: ProteinIsoform MacromolecularComplex: text: MacromolecularComplex Unknown: text: Unknown","title":"LinkML Source"},{"location":"InformationBiomacromoleculeTermObject/","text":"Class: InformationBiomacromoleculeTermObject An abstract class for all information biomacromolecule term objects NOTE : this is an abstract class and should not be instantiated directly URI: gocam:InformationBiomacromoleculeTermObject classDiagram class InformationBiomacromoleculeTermObject click InformationBiomacromoleculeTermObject href \"../InformationBiomacromoleculeTermObject\" TermObject <|-- InformationBiomacromoleculeTermObject click TermObject href \"../TermObject\" InformationBiomacromoleculeTermObject <|-- GeneProductTermObject click GeneProductTermObject href \"../GeneProductTermObject\" InformationBiomacromoleculeTermObject <|-- ProteinComplexTermObject click ProteinComplexTermObject href \"../ProteinComplexTermObject\" InformationBiomacromoleculeTermObject : id InformationBiomacromoleculeTermObject : label InformationBiomacromoleculeTermObject : obsolete InformationBiomacromoleculeTermObject : type Inheritance Object TermObject InformationBiomacromoleculeTermObject GeneProductTermObject ProteinComplexTermObject Slots Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object Usages used by used in type used EnabledByAssociation term range InformationBiomacromoleculeTermObject Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:InformationBiomacromoleculeTermObject native gocam:InformationBiomacromoleculeTermObject LinkML Source Direct name: InformationBiomacromoleculeTermObject description: An abstract class for all information biomacromolecule term objects from_schema: https://w3id.org/gocam is_a: TermObject abstract: true Induced name: InformationBiomacromoleculeTermObject description: An abstract class for all information biomacromolecule term objects from_schema: https://w3id.org/gocam is_a: TermObject abstract: true attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: InformationBiomacromoleculeTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: InformationBiomacromoleculeTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: InformationBiomacromoleculeTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: InformationBiomacromoleculeTermObject domain_of: - Object range: boolean","title":"Class: InformationBiomacromoleculeTermObject"},{"location":"InformationBiomacromoleculeTermObject/#class-informationbiomacromoleculetermobject","text":"An abstract class for all information biomacromolecule term objects NOTE : this is an abstract class and should not be instantiated directly URI: gocam:InformationBiomacromoleculeTermObject classDiagram class InformationBiomacromoleculeTermObject click InformationBiomacromoleculeTermObject href \"../InformationBiomacromoleculeTermObject\" TermObject <|-- InformationBiomacromoleculeTermObject click TermObject href \"../TermObject\" InformationBiomacromoleculeTermObject <|-- GeneProductTermObject click GeneProductTermObject href \"../GeneProductTermObject\" InformationBiomacromoleculeTermObject <|-- ProteinComplexTermObject click ProteinComplexTermObject href \"../ProteinComplexTermObject\" InformationBiomacromoleculeTermObject : id InformationBiomacromoleculeTermObject : label InformationBiomacromoleculeTermObject : obsolete InformationBiomacromoleculeTermObject : type","title":"Class: InformationBiomacromoleculeTermObject"},{"location":"InformationBiomacromoleculeTermObject/#inheritance","text":"Object TermObject InformationBiomacromoleculeTermObject GeneProductTermObject ProteinComplexTermObject","title":"Inheritance"},{"location":"InformationBiomacromoleculeTermObject/#slots","text":"Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object","title":"Slots"},{"location":"InformationBiomacromoleculeTermObject/#usages","text":"used by used in type used EnabledByAssociation term range InformationBiomacromoleculeTermObject","title":"Usages"},{"location":"InformationBiomacromoleculeTermObject/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"InformationBiomacromoleculeTermObject/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"InformationBiomacromoleculeTermObject/#mappings","text":"Mapping Type Mapped Value self gocam:InformationBiomacromoleculeTermObject native gocam:InformationBiomacromoleculeTermObject","title":"Mappings"},{"location":"InformationBiomacromoleculeTermObject/#linkml-source","text":"","title":"LinkML Source"},{"location":"InformationBiomacromoleculeTermObject/#direct","text":"name: InformationBiomacromoleculeTermObject description: An abstract class for all information biomacromolecule term objects from_schema: https://w3id.org/gocam is_a: TermObject abstract: true","title":"Direct"},{"location":"InformationBiomacromoleculeTermObject/#induced","text":"name: InformationBiomacromoleculeTermObject description: An abstract class for all information biomacromolecule term objects from_schema: https://w3id.org/gocam is_a: TermObject abstract: true attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: InformationBiomacromoleculeTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: InformationBiomacromoleculeTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: InformationBiomacromoleculeTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: InformationBiomacromoleculeTermObject domain_of: - Object range: boolean","title":"Induced"},{"location":"Integer/","text":"Type: Integer An integer URI: xsd:integer base : int uri : xsd:integer Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam","title":"Type: Integer"},{"location":"Integer/#type-integer","text":"An integer URI: xsd:integer base : int uri : xsd:integer","title":"Type: Integer"},{"location":"Integer/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Integer/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"Jsonpath/","text":"Type: Jsonpath A string encoding a JSON Path. The value of the string MUST conform to JSON Point syntax and SHOULD dereference to zero or more valid objects within the current instance document when encoded in tree form. URI: xsd:string base : str uri : xsd:string repr : str Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam","title":"Type: Jsonpath"},{"location":"Jsonpath/#type-jsonpath","text":"A string encoding a JSON Path. The value of the string MUST conform to JSON Point syntax and SHOULD dereference to zero or more valid objects within the current instance document when encoded in tree form. URI: xsd:string base : str uri : xsd:string repr : str","title":"Type: Jsonpath"},{"location":"Jsonpath/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Jsonpath/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"Jsonpointer/","text":"Type: Jsonpointer A string encoding a JSON Pointer. The value of the string MUST conform to JSON Point syntax and SHOULD dereference to a valid object within the current instance document when encoded in tree form. URI: xsd:string base : str uri : xsd:string repr : str Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam","title":"Type: Jsonpointer"},{"location":"Jsonpointer/#type-jsonpointer","text":"A string encoding a JSON Pointer. The value of the string MUST conform to JSON Point syntax and SHOULD dereference to a valid object within the current instance document when encoded in tree form. URI: xsd:string base : str uri : xsd:string repr : str","title":"Type: Jsonpointer"},{"location":"Jsonpointer/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Jsonpointer/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"Model/","text":"Class: Model A model of a biological program consisting of a set of causally connected activities URI: gocam:Model classDiagram class Model click Model href \"../Model\" Model : activities Model --> \"*\" Activity : activities click Activity href \"../Activity\" Model : comments Model : id Model : objects Model --> \"*\" Object : objects click Object href \"../Object\" Model : provenances Model --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" Model : status Model --> \"0..1\" ModelStateEnum : status click ModelStateEnum href \"../ModelStateEnum\" Model : taxon Model --> \"0..1\" TaxonTermObject : taxon click TaxonTermObject href \"../TaxonTermObject\" Model : title Slots Name Cardinality and Range Description Inheritance id 1 Uriorcurie The identifier of the model direct title 0..1 String The human-readable descriptive title of the model direct taxon 0..1 TaxonTermObject The primary taxon that the model is about direct status 0..1 ModelStateEnum The status of the model direct comments * String Comments about the model direct activities * Activity All of the activities that are part of the model direct objects * Object All of the objects that are part of the model direct provenances * ProvenanceInfo Model-level provenance information direct Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:Model native gocam:Model LinkML Source Direct name: Model description: A model of a biological program consisting of a set of causally connected activities from_schema: https://w3id.org/gocam attributes: id: name: id description: The identifier of the model. Should be in gocam namespace. from_schema: https://w3id.org/gocam rank: 1000 identifier: true domain_of: - Model - Activity - Object range: uriorcurie required: true title: name: title description: The human-readable descriptive title of the model from_schema: https://w3id.org/gocam rank: 1000 slot_uri: dct:title domain_of: - Model taxon: name: taxon description: The primary taxon that the model is about from_schema: https://w3id.org/gocam rank: 1000 domain_of: - Model range: TaxonTermObject status: name: status description: The status of the model from_schema: https://w3id.org/gocam aliases: - model state rank: 1000 slot_uri: pav:status domain_of: - Model range: ModelStateEnum comments: name: comments description: Comments about the model from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:comment multivalued: true domain_of: - Model activities: name: activities description: All of the activities that are part of the model from_schema: https://w3id.org/gocam rank: 1000 multivalued: true domain_of: - Model range: Activity inlined: true inlined_as_list: true objects: name: objects description: All of the objects that are part of the model. This includes terms as well as publications and database objects like gene. This is not strictly part of the data managed by the model, it is for convenience, and should be refreshed from outside. from_schema: https://w3id.org/gocam rank: 1000 multivalued: true domain_of: - Model range: Object inlined: true inlined_as_list: true provenances: name: provenances description: Model-level provenance information from_schema: https://w3id.org/gocam rank: 1000 multivalued: true domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true Induced name: Model description: A model of a biological program consisting of a set of causally connected activities from_schema: https://w3id.org/gocam attributes: id: name: id description: The identifier of the model. Should be in gocam namespace. from_schema: https://w3id.org/gocam rank: 1000 identifier: true alias: id owner: Model domain_of: - Model - Activity - Object range: uriorcurie title: name: title description: The human-readable descriptive title of the model from_schema: https://w3id.org/gocam rank: 1000 slot_uri: dct:title alias: title owner: Model domain_of: - Model range: string taxon: name: taxon description: The primary taxon that the model is about from_schema: https://w3id.org/gocam rank: 1000 alias: taxon owner: Model domain_of: - Model range: TaxonTermObject status: name: status description: The status of the model from_schema: https://w3id.org/gocam aliases: - model state rank: 1000 slot_uri: pav:status alias: status owner: Model domain_of: - Model range: ModelStateEnum comments: name: comments description: Comments about the model from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:comment multivalued: true alias: comments owner: Model domain_of: - Model range: string activities: name: activities description: All of the activities that are part of the model from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: activities owner: Model domain_of: - Model range: Activity inlined_as_list: true objects: name: objects description: All of the objects that are part of the model. This includes terms as well as publications and database objects like gene. This is not strictly part of the data managed by the model, it is for convenience, and should be refreshed from outside. from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: objects owner: Model domain_of: - Model range: Object inlined_as_list: true provenances: name: provenances description: Model-level provenance information from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: provenances owner: Model domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined_as_list: true","title":"Class: Model"},{"location":"Model/#class-model","text":"A model of a biological program consisting of a set of causally connected activities URI: gocam:Model classDiagram class Model click Model href \"../Model\" Model : activities Model --> \"*\" Activity : activities click Activity href \"../Activity\" Model : comments Model : id Model : objects Model --> \"*\" Object : objects click Object href \"../Object\" Model : provenances Model --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" Model : status Model --> \"0..1\" ModelStateEnum : status click ModelStateEnum href \"../ModelStateEnum\" Model : taxon Model --> \"0..1\" TaxonTermObject : taxon click TaxonTermObject href \"../TaxonTermObject\" Model : title","title":"Class: Model"},{"location":"Model/#slots","text":"Name Cardinality and Range Description Inheritance id 1 Uriorcurie The identifier of the model direct title 0..1 String The human-readable descriptive title of the model direct taxon 0..1 TaxonTermObject The primary taxon that the model is about direct status 0..1 ModelStateEnum The status of the model direct comments * String Comments about the model direct activities * Activity All of the activities that are part of the model direct objects * Object All of the objects that are part of the model direct provenances * ProvenanceInfo Model-level provenance information direct","title":"Slots"},{"location":"Model/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Model/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"Model/#mappings","text":"Mapping Type Mapped Value self gocam:Model native gocam:Model","title":"Mappings"},{"location":"Model/#linkml-source","text":"","title":"LinkML Source"},{"location":"Model/#direct","text":"name: Model description: A model of a biological program consisting of a set of causally connected activities from_schema: https://w3id.org/gocam attributes: id: name: id description: The identifier of the model. Should be in gocam namespace. from_schema: https://w3id.org/gocam rank: 1000 identifier: true domain_of: - Model - Activity - Object range: uriorcurie required: true title: name: title description: The human-readable descriptive title of the model from_schema: https://w3id.org/gocam rank: 1000 slot_uri: dct:title domain_of: - Model taxon: name: taxon description: The primary taxon that the model is about from_schema: https://w3id.org/gocam rank: 1000 domain_of: - Model range: TaxonTermObject status: name: status description: The status of the model from_schema: https://w3id.org/gocam aliases: - model state rank: 1000 slot_uri: pav:status domain_of: - Model range: ModelStateEnum comments: name: comments description: Comments about the model from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:comment multivalued: true domain_of: - Model activities: name: activities description: All of the activities that are part of the model from_schema: https://w3id.org/gocam rank: 1000 multivalued: true domain_of: - Model range: Activity inlined: true inlined_as_list: true objects: name: objects description: All of the objects that are part of the model. This includes terms as well as publications and database objects like gene. This is not strictly part of the data managed by the model, it is for convenience, and should be refreshed from outside. from_schema: https://w3id.org/gocam rank: 1000 multivalued: true domain_of: - Model range: Object inlined: true inlined_as_list: true provenances: name: provenances description: Model-level provenance information from_schema: https://w3id.org/gocam rank: 1000 multivalued: true domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Direct"},{"location":"Model/#induced","text":"name: Model description: A model of a biological program consisting of a set of causally connected activities from_schema: https://w3id.org/gocam attributes: id: name: id description: The identifier of the model. Should be in gocam namespace. from_schema: https://w3id.org/gocam rank: 1000 identifier: true alias: id owner: Model domain_of: - Model - Activity - Object range: uriorcurie title: name: title description: The human-readable descriptive title of the model from_schema: https://w3id.org/gocam rank: 1000 slot_uri: dct:title alias: title owner: Model domain_of: - Model range: string taxon: name: taxon description: The primary taxon that the model is about from_schema: https://w3id.org/gocam rank: 1000 alias: taxon owner: Model domain_of: - Model range: TaxonTermObject status: name: status description: The status of the model from_schema: https://w3id.org/gocam aliases: - model state rank: 1000 slot_uri: pav:status alias: status owner: Model domain_of: - Model range: ModelStateEnum comments: name: comments description: Comments about the model from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:comment multivalued: true alias: comments owner: Model domain_of: - Model range: string activities: name: activities description: All of the activities that are part of the model from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: activities owner: Model domain_of: - Model range: Activity inlined_as_list: true objects: name: objects description: All of the objects that are part of the model. This includes terms as well as publications and database objects like gene. This is not strictly part of the data managed by the model, it is for convenience, and should be refreshed from outside. from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: objects owner: Model domain_of: - Model range: Object inlined_as_list: true provenances: name: provenances description: Model-level provenance information from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: provenances owner: Model domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined_as_list: true","title":"Induced"},{"location":"ModelStateEnum/","text":"Enum: ModelStateEnum Status of a model URI: ModelStateEnum Permissible Values Value Meaning Description production None development None Slots Name Description status The status of the model Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam LinkML Source name: ModelStateEnum description: Status of a model from_schema: https://w3id.org/gocam rank: 1000 permissible_values: production: text: production development: text: development","title":"Enum: ModelStateEnum"},{"location":"ModelStateEnum/#enum-modelstateenum","text":"Status of a model URI: ModelStateEnum","title":"Enum: ModelStateEnum"},{"location":"ModelStateEnum/#permissible-values","text":"Value Meaning Description production None development None","title":"Permissible Values"},{"location":"ModelStateEnum/#slots","text":"Name Description status The status of the model","title":"Slots"},{"location":"ModelStateEnum/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"ModelStateEnum/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"ModelStateEnum/#linkml-source","text":"name: ModelStateEnum description: Status of a model from_schema: https://w3id.org/gocam rank: 1000 permissible_values: production: text: production development: text: development","title":"LinkML Source"},{"location":"MolecularFunctionAssociation/","text":"Class: MolecularFunctionAssociation An association between an activity and a molecular function term URI: gocam:MolecularFunctionAssociation classDiagram class MolecularFunctionAssociation click MolecularFunctionAssociation href \"../MolecularFunctionAssociation\" TermAssociation <|-- MolecularFunctionAssociation click TermAssociation href \"../TermAssociation\" MolecularFunctionAssociation : evidence MolecularFunctionAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" MolecularFunctionAssociation : provenances MolecularFunctionAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" MolecularFunctionAssociation : term MolecularFunctionAssociation --> \"0..1\" MolecularFunctionTermObject : term click MolecularFunctionTermObject href \"../MolecularFunctionTermObject\" MolecularFunctionAssociation : type Inheritance Association TermAssociation MolecularFunctionAssociation Slots Name Cardinality and Range Description Inheritance term 0..1 MolecularFunctionTermObject The ontology term that describes the nature of the association TermAssociation type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association Usages used by used in type used Activity molecular_function range MolecularFunctionAssociation TODOs account for non-MF activity types in Reactome Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:MolecularFunctionAssociation native gocam:MolecularFunctionAssociation LinkML Source Direct name: MolecularFunctionAssociation description: An association between an activity and a molecular function term todos: - account for non-MF activity types in Reactome from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: MolecularFunctionTermObject Induced name: MolecularFunctionAssociation description: An association between an activity and a molecular function term todos: - account for non-MF activity types in Reactome from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: MolecularFunctionTermObject attributes: term: name: term description: The ontology term that describes the nature of the association from_schema: https://w3id.org/gocam alias: term owner: MolecularFunctionAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: MolecularFunctionTermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: MolecularFunctionAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: MolecularFunctionAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: MolecularFunctionAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Class: MolecularFunctionAssociation"},{"location":"MolecularFunctionAssociation/#class-molecularfunctionassociation","text":"An association between an activity and a molecular function term URI: gocam:MolecularFunctionAssociation classDiagram class MolecularFunctionAssociation click MolecularFunctionAssociation href \"../MolecularFunctionAssociation\" TermAssociation <|-- MolecularFunctionAssociation click TermAssociation href \"../TermAssociation\" MolecularFunctionAssociation : evidence MolecularFunctionAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" MolecularFunctionAssociation : provenances MolecularFunctionAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" MolecularFunctionAssociation : term MolecularFunctionAssociation --> \"0..1\" MolecularFunctionTermObject : term click MolecularFunctionTermObject href \"../MolecularFunctionTermObject\" MolecularFunctionAssociation : type","title":"Class: MolecularFunctionAssociation"},{"location":"MolecularFunctionAssociation/#inheritance","text":"Association TermAssociation MolecularFunctionAssociation","title":"Inheritance"},{"location":"MolecularFunctionAssociation/#slots","text":"Name Cardinality and Range Description Inheritance term 0..1 MolecularFunctionTermObject The ontology term that describes the nature of the association TermAssociation type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association","title":"Slots"},{"location":"MolecularFunctionAssociation/#usages","text":"used by used in type used Activity molecular_function range MolecularFunctionAssociation","title":"Usages"},{"location":"MolecularFunctionAssociation/#todos","text":"account for non-MF activity types in Reactome","title":"TODOs"},{"location":"MolecularFunctionAssociation/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"MolecularFunctionAssociation/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"MolecularFunctionAssociation/#mappings","text":"Mapping Type Mapped Value self gocam:MolecularFunctionAssociation native gocam:MolecularFunctionAssociation","title":"Mappings"},{"location":"MolecularFunctionAssociation/#linkml-source","text":"","title":"LinkML Source"},{"location":"MolecularFunctionAssociation/#direct","text":"name: MolecularFunctionAssociation description: An association between an activity and a molecular function term todos: - account for non-MF activity types in Reactome from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: MolecularFunctionTermObject","title":"Direct"},{"location":"MolecularFunctionAssociation/#induced","text":"name: MolecularFunctionAssociation description: An association between an activity and a molecular function term todos: - account for non-MF activity types in Reactome from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: MolecularFunctionTermObject attributes: term: name: term description: The ontology term that describes the nature of the association from_schema: https://w3id.org/gocam alias: term owner: MolecularFunctionAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: MolecularFunctionTermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: MolecularFunctionAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: MolecularFunctionAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: MolecularFunctionAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Induced"},{"location":"MolecularFunctionTermObject/","text":"Class: MolecularFunctionTermObject A term object that represents a molecular function term from GO URI: gocam:MolecularFunctionTermObject classDiagram class MolecularFunctionTermObject click MolecularFunctionTermObject href \"../MolecularFunctionTermObject\" TermObject <|-- MolecularFunctionTermObject click TermObject href \"../TermObject\" MolecularFunctionTermObject : id MolecularFunctionTermObject : label MolecularFunctionTermObject : obsolete MolecularFunctionTermObject : type Inheritance Object TermObject MolecularFunctionTermObject Slots Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object Usages used by used in type used MolecularFunctionAssociation term range MolecularFunctionTermObject Identifier and Mapping Information Valid ID Prefixes Instances of this class should have identifiers with one of the following prefixes: GO Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:MolecularFunctionTermObject native gocam:MolecularFunctionTermObject LinkML Source Direct name: MolecularFunctionTermObject id_prefixes: - GO description: A term object that represents a molecular function term from GO from_schema: https://w3id.org/gocam is_a: TermObject Induced name: MolecularFunctionTermObject id_prefixes: - GO description: A term object that represents a molecular function term from GO from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: MolecularFunctionTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: MolecularFunctionTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: MolecularFunctionTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: MolecularFunctionTermObject domain_of: - Object range: boolean","title":"Class: MolecularFunctionTermObject"},{"location":"MolecularFunctionTermObject/#class-molecularfunctiontermobject","text":"A term object that represents a molecular function term from GO URI: gocam:MolecularFunctionTermObject classDiagram class MolecularFunctionTermObject click MolecularFunctionTermObject href \"../MolecularFunctionTermObject\" TermObject <|-- MolecularFunctionTermObject click TermObject href \"../TermObject\" MolecularFunctionTermObject : id MolecularFunctionTermObject : label MolecularFunctionTermObject : obsolete MolecularFunctionTermObject : type","title":"Class: MolecularFunctionTermObject"},{"location":"MolecularFunctionTermObject/#inheritance","text":"Object TermObject MolecularFunctionTermObject","title":"Inheritance"},{"location":"MolecularFunctionTermObject/#slots","text":"Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object","title":"Slots"},{"location":"MolecularFunctionTermObject/#usages","text":"used by used in type used MolecularFunctionAssociation term range MolecularFunctionTermObject","title":"Usages"},{"location":"MolecularFunctionTermObject/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"MolecularFunctionTermObject/#valid-id-prefixes","text":"Instances of this class should have identifiers with one of the following prefixes: GO","title":"Valid ID Prefixes"},{"location":"MolecularFunctionTermObject/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"MolecularFunctionTermObject/#mappings","text":"Mapping Type Mapped Value self gocam:MolecularFunctionTermObject native gocam:MolecularFunctionTermObject","title":"Mappings"},{"location":"MolecularFunctionTermObject/#linkml-source","text":"","title":"LinkML Source"},{"location":"MolecularFunctionTermObject/#direct","text":"name: MolecularFunctionTermObject id_prefixes: - GO description: A term object that represents a molecular function term from GO from_schema: https://w3id.org/gocam is_a: TermObject","title":"Direct"},{"location":"MolecularFunctionTermObject/#induced","text":"name: MolecularFunctionTermObject id_prefixes: - GO description: A term object that represents a molecular function term from GO from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: MolecularFunctionTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: MolecularFunctionTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: MolecularFunctionTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: MolecularFunctionTermObject domain_of: - Object range: boolean","title":"Induced"},{"location":"MoleculeAssociation/","text":"Class: MoleculeAssociation An association between an activity and a molecule term URI: gocam:MoleculeAssociation classDiagram class MoleculeAssociation click MoleculeAssociation href \"../MoleculeAssociation\" TermAssociation <|-- MoleculeAssociation click TermAssociation href \"../TermAssociation\" MoleculeAssociation : evidence MoleculeAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" MoleculeAssociation : provenances MoleculeAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" MoleculeAssociation : term MoleculeAssociation --> \"0..1\" MoleculeTermObject : term click MoleculeTermObject href \"../MoleculeTermObject\" MoleculeAssociation : type Inheritance Association TermAssociation MoleculeAssociation Slots Name Cardinality and Range Description Inheritance term 0..1 MoleculeTermObject The ontology term that describes the nature of the association TermAssociation type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association Usages used by used in type used Activity has_input range MoleculeAssociation Activity has_primary_input range MoleculeAssociation Activity has_output range MoleculeAssociation Activity has_primary_output range MoleculeAssociation Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:MoleculeAssociation native gocam:MoleculeAssociation LinkML Source Direct name: MoleculeAssociation description: An association between an activity and a molecule term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: MoleculeTermObject Induced name: MoleculeAssociation description: An association between an activity and a molecule term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: MoleculeTermObject attributes: term: name: term description: The ontology term that describes the nature of the association from_schema: https://w3id.org/gocam alias: term owner: MoleculeAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: MoleculeTermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: MoleculeAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: MoleculeAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: MoleculeAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Class: MoleculeAssociation"},{"location":"MoleculeAssociation/#class-moleculeassociation","text":"An association between an activity and a molecule term URI: gocam:MoleculeAssociation classDiagram class MoleculeAssociation click MoleculeAssociation href \"../MoleculeAssociation\" TermAssociation <|-- MoleculeAssociation click TermAssociation href \"../TermAssociation\" MoleculeAssociation : evidence MoleculeAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" MoleculeAssociation : provenances MoleculeAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" MoleculeAssociation : term MoleculeAssociation --> \"0..1\" MoleculeTermObject : term click MoleculeTermObject href \"../MoleculeTermObject\" MoleculeAssociation : type","title":"Class: MoleculeAssociation"},{"location":"MoleculeAssociation/#inheritance","text":"Association TermAssociation MoleculeAssociation","title":"Inheritance"},{"location":"MoleculeAssociation/#slots","text":"Name Cardinality and Range Description Inheritance term 0..1 MoleculeTermObject The ontology term that describes the nature of the association TermAssociation type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association","title":"Slots"},{"location":"MoleculeAssociation/#usages","text":"used by used in type used Activity has_input range MoleculeAssociation Activity has_primary_input range MoleculeAssociation Activity has_output range MoleculeAssociation Activity has_primary_output range MoleculeAssociation","title":"Usages"},{"location":"MoleculeAssociation/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"MoleculeAssociation/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"MoleculeAssociation/#mappings","text":"Mapping Type Mapped Value self gocam:MoleculeAssociation native gocam:MoleculeAssociation","title":"Mappings"},{"location":"MoleculeAssociation/#linkml-source","text":"","title":"LinkML Source"},{"location":"MoleculeAssociation/#direct","text":"name: MoleculeAssociation description: An association between an activity and a molecule term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: MoleculeTermObject","title":"Direct"},{"location":"MoleculeAssociation/#induced","text":"name: MoleculeAssociation description: An association between an activity and a molecule term from_schema: https://w3id.org/gocam is_a: TermAssociation slot_usage: term: name: term domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: MoleculeTermObject attributes: term: name: term description: The ontology term that describes the nature of the association from_schema: https://w3id.org/gocam alias: term owner: MoleculeAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: MoleculeTermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: MoleculeAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: MoleculeAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: MoleculeAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Induced"},{"location":"MoleculeTermObject/","text":"Class: MoleculeTermObject A term object that represents a molecule term from CHEBI or UniProtKB URI: gocam:MoleculeTermObject classDiagram class MoleculeTermObject click MoleculeTermObject href \"../MoleculeTermObject\" TermObject <|-- MoleculeTermObject click TermObject href \"../TermObject\" MoleculeTermObject : id MoleculeTermObject : label MoleculeTermObject : obsolete MoleculeTermObject : type Inheritance Object TermObject MoleculeTermObject Slots Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object Usages used by used in type used MoleculeAssociation term range MoleculeTermObject Identifier and Mapping Information Valid ID Prefixes Instances of this class should have identifiers with one of the following prefixes: CHEBI UniProtKB Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:MoleculeTermObject native gocam:MoleculeTermObject LinkML Source Direct name: MoleculeTermObject id_prefixes: - CHEBI - UniProtKB description: A term object that represents a molecule term from CHEBI or UniProtKB from_schema: https://w3id.org/gocam is_a: TermObject Induced name: MoleculeTermObject id_prefixes: - CHEBI - UniProtKB description: A term object that represents a molecule term from CHEBI or UniProtKB from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: MoleculeTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: MoleculeTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: MoleculeTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: MoleculeTermObject domain_of: - Object range: boolean","title":"Class: MoleculeTermObject"},{"location":"MoleculeTermObject/#class-moleculetermobject","text":"A term object that represents a molecule term from CHEBI or UniProtKB URI: gocam:MoleculeTermObject classDiagram class MoleculeTermObject click MoleculeTermObject href \"../MoleculeTermObject\" TermObject <|-- MoleculeTermObject click TermObject href \"../TermObject\" MoleculeTermObject : id MoleculeTermObject : label MoleculeTermObject : obsolete MoleculeTermObject : type","title":"Class: MoleculeTermObject"},{"location":"MoleculeTermObject/#inheritance","text":"Object TermObject MoleculeTermObject","title":"Inheritance"},{"location":"MoleculeTermObject/#slots","text":"Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object","title":"Slots"},{"location":"MoleculeTermObject/#usages","text":"used by used in type used MoleculeAssociation term range MoleculeTermObject","title":"Usages"},{"location":"MoleculeTermObject/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"MoleculeTermObject/#valid-id-prefixes","text":"Instances of this class should have identifiers with one of the following prefixes: CHEBI UniProtKB","title":"Valid ID Prefixes"},{"location":"MoleculeTermObject/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"MoleculeTermObject/#mappings","text":"Mapping Type Mapped Value self gocam:MoleculeTermObject native gocam:MoleculeTermObject","title":"Mappings"},{"location":"MoleculeTermObject/#linkml-source","text":"","title":"LinkML Source"},{"location":"MoleculeTermObject/#direct","text":"name: MoleculeTermObject id_prefixes: - CHEBI - UniProtKB description: A term object that represents a molecule term from CHEBI or UniProtKB from_schema: https://w3id.org/gocam is_a: TermObject","title":"Direct"},{"location":"MoleculeTermObject/#induced","text":"name: MoleculeTermObject id_prefixes: - CHEBI - UniProtKB description: A term object that represents a molecule term from CHEBI or UniProtKB from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: MoleculeTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: MoleculeTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: MoleculeTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: MoleculeTermObject domain_of: - Object range: boolean","title":"Induced"},{"location":"Ncname/","text":"Type: Ncname Prefix part of CURIE URI: xsd:string base : NCName uri : xsd:string repr : str Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam","title":"Type: Ncname"},{"location":"Ncname/#type-ncname","text":"Prefix part of CURIE URI: xsd:string base : NCName uri : xsd:string repr : str","title":"Type: Ncname"},{"location":"Ncname/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Ncname/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"Nodeidentifier/","text":"Type: Nodeidentifier A URI, CURIE or BNODE that represents a node in a model. URI: shex:nonLiteral base : NodeIdentifier uri : shex:nonLiteral repr : str Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam","title":"Type: Nodeidentifier"},{"location":"Nodeidentifier/#type-nodeidentifier","text":"A URI, CURIE or BNODE that represents a node in a model. URI: shex:nonLiteral base : NodeIdentifier uri : shex:nonLiteral repr : str","title":"Type: Nodeidentifier"},{"location":"Nodeidentifier/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Nodeidentifier/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"Object/","text":"Class: Object An abstract class for all identified objects in a model URI: gocam:Object classDiagram class Object click Object href \"../Object\" Object <|-- TermObject click TermObject href \"../TermObject\" Object <|-- PublicationObject click PublicationObject href \"../PublicationObject\" Object : id Object : label Object : obsolete Object : type Inheritance Object TermObject PublicationObject Slots Name Cardinality and Range Description Inheritance id 1 Uriorcurie direct label 0..1 String direct type 0..1 Uriorcurie direct obsolete 0..1 Boolean direct Usages used by used in type used Model objects range Object EvidenceItem with_objects range Object Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:Object native gocam:Object LinkML Source Direct name: Object description: An abstract class for all identified objects in a model from_schema: https://w3id.org/gocam attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label domain_of: - Object type: name: type from_schema: https://w3id.org/gocam designates_type: true domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 domain_of: - Object range: boolean Induced name: Object description: An abstract class for all identified objects in a model from_schema: https://w3id.org/gocam attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: Object domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: Object domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: Object domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: Object domain_of: - Object range: boolean","title":"Class: Object"},{"location":"Object/#class-object","text":"An abstract class for all identified objects in a model URI: gocam:Object classDiagram class Object click Object href \"../Object\" Object <|-- TermObject click TermObject href \"../TermObject\" Object <|-- PublicationObject click PublicationObject href \"../PublicationObject\" Object : id Object : label Object : obsolete Object : type","title":"Class: Object"},{"location":"Object/#inheritance","text":"Object TermObject PublicationObject","title":"Inheritance"},{"location":"Object/#slots","text":"Name Cardinality and Range Description Inheritance id 1 Uriorcurie direct label 0..1 String direct type 0..1 Uriorcurie direct obsolete 0..1 Boolean direct","title":"Slots"},{"location":"Object/#usages","text":"used by used in type used Model objects range Object EvidenceItem with_objects range Object","title":"Usages"},{"location":"Object/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Object/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"Object/#mappings","text":"Mapping Type Mapped Value self gocam:Object native gocam:Object","title":"Mappings"},{"location":"Object/#linkml-source","text":"","title":"LinkML Source"},{"location":"Object/#direct","text":"name: Object description: An abstract class for all identified objects in a model from_schema: https://w3id.org/gocam attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label domain_of: - Object type: name: type from_schema: https://w3id.org/gocam designates_type: true domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 domain_of: - Object range: boolean","title":"Direct"},{"location":"Object/#induced","text":"name: Object description: An abstract class for all identified objects in a model from_schema: https://w3id.org/gocam attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: Object domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: Object domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: Object domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: Object domain_of: - Object range: boolean","title":"Induced"},{"location":"Objectidentifier/","text":"Type: Objectidentifier A URI or CURIE that represents an object in the model. URI: shex:iri base : ElementIdentifier uri : shex:iri repr : str Comments Used for inheritance and type checking Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam","title":"Type: Objectidentifier"},{"location":"Objectidentifier/#type-objectidentifier","text":"A URI or CURIE that represents an object in the model. URI: shex:iri base : ElementIdentifier uri : shex:iri repr : str","title":"Type: Objectidentifier"},{"location":"Objectidentifier/#comments","text":"Used for inheritance and type checking","title":"Comments"},{"location":"Objectidentifier/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Objectidentifier/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"PhaseTermObject/","text":"Class: PhaseTermObject A term object that represents a phase term from GO or UBERON URI: gocam:PhaseTermObject classDiagram class PhaseTermObject click PhaseTermObject href \"../PhaseTermObject\" TermObject <|-- PhaseTermObject click TermObject href \"../TermObject\" PhaseTermObject : id PhaseTermObject : label PhaseTermObject : obsolete PhaseTermObject : type Inheritance Object TermObject PhaseTermObject Slots Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object Identifier and Mapping Information Valid ID Prefixes Instances of this class should have identifiers with one of the following prefixes: GO UBERON PO Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:PhaseTermObject native gocam:PhaseTermObject LinkML Source Direct name: PhaseTermObject id_prefixes: - GO - UBERON - PO description: A term object that represents a phase term from GO or UBERON from_schema: https://w3id.org/gocam is_a: TermObject Induced name: PhaseTermObject id_prefixes: - GO - UBERON - PO description: A term object that represents a phase term from GO or UBERON from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: PhaseTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: PhaseTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: PhaseTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: PhaseTermObject domain_of: - Object range: boolean","title":"Class: PhaseTermObject"},{"location":"PhaseTermObject/#class-phasetermobject","text":"A term object that represents a phase term from GO or UBERON URI: gocam:PhaseTermObject classDiagram class PhaseTermObject click PhaseTermObject href \"../PhaseTermObject\" TermObject <|-- PhaseTermObject click TermObject href \"../TermObject\" PhaseTermObject : id PhaseTermObject : label PhaseTermObject : obsolete PhaseTermObject : type","title":"Class: PhaseTermObject"},{"location":"PhaseTermObject/#inheritance","text":"Object TermObject PhaseTermObject","title":"Inheritance"},{"location":"PhaseTermObject/#slots","text":"Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object","title":"Slots"},{"location":"PhaseTermObject/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"PhaseTermObject/#valid-id-prefixes","text":"Instances of this class should have identifiers with one of the following prefixes: GO UBERON PO","title":"Valid ID Prefixes"},{"location":"PhaseTermObject/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"PhaseTermObject/#mappings","text":"Mapping Type Mapped Value self gocam:PhaseTermObject native gocam:PhaseTermObject","title":"Mappings"},{"location":"PhaseTermObject/#linkml-source","text":"","title":"LinkML Source"},{"location":"PhaseTermObject/#direct","text":"name: PhaseTermObject id_prefixes: - GO - UBERON - PO description: A term object that represents a phase term from GO or UBERON from_schema: https://w3id.org/gocam is_a: TermObject","title":"Direct"},{"location":"PhaseTermObject/#induced","text":"name: PhaseTermObject id_prefixes: - GO - UBERON - PO description: A term object that represents a phase term from GO or UBERON from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: PhaseTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: PhaseTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: PhaseTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: PhaseTermObject domain_of: - Object range: boolean","title":"Induced"},{"location":"PredicateTermObject/","text":"Class: PredicateTermObject A term object that represents a taxon term from NCBITaxon URI: gocam:PredicateTermObject classDiagram class PredicateTermObject click PredicateTermObject href \"../PredicateTermObject\" TermObject <|-- PredicateTermObject click TermObject href \"../TermObject\" PredicateTermObject : id PredicateTermObject : label PredicateTermObject : obsolete PredicateTermObject : type Inheritance Object TermObject PredicateTermObject Slots Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object Usages used by used in type used CausalAssociation predicate range PredicateTermObject Identifier and Mapping Information Valid ID Prefixes Instances of this class should have identifiers with one of the following prefixes: RO Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:PredicateTermObject native gocam:PredicateTermObject LinkML Source Direct name: PredicateTermObject id_prefixes: - RO description: A term object that represents a taxon term from NCBITaxon from_schema: https://w3id.org/gocam is_a: TermObject Induced name: PredicateTermObject id_prefixes: - RO description: A term object that represents a taxon term from NCBITaxon from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: PredicateTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: PredicateTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: PredicateTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: PredicateTermObject domain_of: - Object range: boolean","title":"Class: PredicateTermObject"},{"location":"PredicateTermObject/#class-predicatetermobject","text":"A term object that represents a taxon term from NCBITaxon URI: gocam:PredicateTermObject classDiagram class PredicateTermObject click PredicateTermObject href \"../PredicateTermObject\" TermObject <|-- PredicateTermObject click TermObject href \"../TermObject\" PredicateTermObject : id PredicateTermObject : label PredicateTermObject : obsolete PredicateTermObject : type","title":"Class: PredicateTermObject"},{"location":"PredicateTermObject/#inheritance","text":"Object TermObject PredicateTermObject","title":"Inheritance"},{"location":"PredicateTermObject/#slots","text":"Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object","title":"Slots"},{"location":"PredicateTermObject/#usages","text":"used by used in type used CausalAssociation predicate range PredicateTermObject","title":"Usages"},{"location":"PredicateTermObject/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"PredicateTermObject/#valid-id-prefixes","text":"Instances of this class should have identifiers with one of the following prefixes: RO","title":"Valid ID Prefixes"},{"location":"PredicateTermObject/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"PredicateTermObject/#mappings","text":"Mapping Type Mapped Value self gocam:PredicateTermObject native gocam:PredicateTermObject","title":"Mappings"},{"location":"PredicateTermObject/#linkml-source","text":"","title":"LinkML Source"},{"location":"PredicateTermObject/#direct","text":"name: PredicateTermObject id_prefixes: - RO description: A term object that represents a taxon term from NCBITaxon from_schema: https://w3id.org/gocam is_a: TermObject","title":"Direct"},{"location":"PredicateTermObject/#induced","text":"name: PredicateTermObject id_prefixes: - RO description: A term object that represents a taxon term from NCBITaxon from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: PredicateTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: PredicateTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: PredicateTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: PredicateTermObject domain_of: - Object range: boolean","title":"Induced"},{"location":"ProteinComplexTermObject/","text":"Class: ProteinComplexTermObject A term object that represents a protein complex term from GO URI: gocam:ProteinComplexTermObject classDiagram class ProteinComplexTermObject click ProteinComplexTermObject href \"../ProteinComplexTermObject\" InformationBiomacromoleculeTermObject <|-- ProteinComplexTermObject click InformationBiomacromoleculeTermObject href \"../InformationBiomacromoleculeTermObject\" ProteinComplexTermObject : id ProteinComplexTermObject : label ProteinComplexTermObject : obsolete ProteinComplexTermObject : type Inheritance Object TermObject InformationBiomacromoleculeTermObject ProteinComplexTermObject Slots Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object Usages used by used in type used EnabledByProteinComplexAssociation term range ProteinComplexTermObject Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:ProteinComplexTermObject native gocam:ProteinComplexTermObject LinkML Source Direct name: ProteinComplexTermObject description: A term object that represents a protein complex term from GO from_schema: https://w3id.org/gocam is_a: InformationBiomacromoleculeTermObject Induced name: ProteinComplexTermObject description: A term object that represents a protein complex term from GO from_schema: https://w3id.org/gocam is_a: InformationBiomacromoleculeTermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: ProteinComplexTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: ProteinComplexTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: ProteinComplexTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: ProteinComplexTermObject domain_of: - Object range: boolean","title":"Class: ProteinComplexTermObject"},{"location":"ProteinComplexTermObject/#class-proteincomplextermobject","text":"A term object that represents a protein complex term from GO URI: gocam:ProteinComplexTermObject classDiagram class ProteinComplexTermObject click ProteinComplexTermObject href \"../ProteinComplexTermObject\" InformationBiomacromoleculeTermObject <|-- ProteinComplexTermObject click InformationBiomacromoleculeTermObject href \"../InformationBiomacromoleculeTermObject\" ProteinComplexTermObject : id ProteinComplexTermObject : label ProteinComplexTermObject : obsolete ProteinComplexTermObject : type","title":"Class: ProteinComplexTermObject"},{"location":"ProteinComplexTermObject/#inheritance","text":"Object TermObject InformationBiomacromoleculeTermObject ProteinComplexTermObject","title":"Inheritance"},{"location":"ProteinComplexTermObject/#slots","text":"Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object","title":"Slots"},{"location":"ProteinComplexTermObject/#usages","text":"used by used in type used EnabledByProteinComplexAssociation term range ProteinComplexTermObject","title":"Usages"},{"location":"ProteinComplexTermObject/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"ProteinComplexTermObject/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"ProteinComplexTermObject/#mappings","text":"Mapping Type Mapped Value self gocam:ProteinComplexTermObject native gocam:ProteinComplexTermObject","title":"Mappings"},{"location":"ProteinComplexTermObject/#linkml-source","text":"","title":"LinkML Source"},{"location":"ProteinComplexTermObject/#direct","text":"name: ProteinComplexTermObject description: A term object that represents a protein complex term from GO from_schema: https://w3id.org/gocam is_a: InformationBiomacromoleculeTermObject","title":"Direct"},{"location":"ProteinComplexTermObject/#induced","text":"name: ProteinComplexTermObject description: A term object that represents a protein complex term from GO from_schema: https://w3id.org/gocam is_a: InformationBiomacromoleculeTermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: ProteinComplexTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: ProteinComplexTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: ProteinComplexTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: ProteinComplexTermObject domain_of: - Object range: boolean","title":"Induced"},{"location":"ProvenanceInfo/","text":"Class: ProvenanceInfo Provenance information for an object URI: gocam:ProvenanceInfo classDiagram class ProvenanceInfo click ProvenanceInfo href \"../ProvenanceInfo\" ProvenanceInfo : contributor ProvenanceInfo : created ProvenanceInfo : date ProvenanceInfo : provided_by Slots Name Cardinality and Range Description Inheritance contributor 0..1 String direct created 0..1 String direct date 0..1 String direct provided_by 0..1 String direct Usages used by used in type used Model provenances range ProvenanceInfo Activity provenances range ProvenanceInfo EvidenceItem provenances range ProvenanceInfo Association provenances range ProvenanceInfo EnabledByAssociation provenances range ProvenanceInfo EnabledByGeneProductAssociation provenances range ProvenanceInfo EnabledByProteinComplexAssociation provenances range ProvenanceInfo CausalAssociation provenances range ProvenanceInfo TermAssociation provenances range ProvenanceInfo MolecularFunctionAssociation provenances range ProvenanceInfo BiologicalProcessAssociation provenances range ProvenanceInfo CellularAnatomicalEntityAssociation provenances range ProvenanceInfo CellTypeAssociation provenances range ProvenanceInfo GrossAnatomyAssociation provenances range ProvenanceInfo MoleculeAssociation provenances range ProvenanceInfo Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:ProvenanceInfo native gocam:ProvenanceInfo LinkML Source Direct name: ProvenanceInfo description: Provenance information for an object from_schema: https://w3id.org/gocam attributes: contributor: name: contributor from_schema: https://w3id.org/gocam rank: 1000 slot_uri: dct:contributor domain_of: - ProvenanceInfo created: name: created from_schema: https://w3id.org/gocam rank: 1000 slot_uri: dct:created domain_of: - ProvenanceInfo date: name: date from_schema: https://w3id.org/gocam rank: 1000 slot_uri: dct:date domain_of: - ProvenanceInfo provided_by: name: provided_by from_schema: https://w3id.org/gocam rank: 1000 slot_uri: pav:providedBy domain_of: - ProvenanceInfo Induced name: ProvenanceInfo description: Provenance information for an object from_schema: https://w3id.org/gocam attributes: contributor: name: contributor from_schema: https://w3id.org/gocam rank: 1000 slot_uri: dct:contributor alias: contributor owner: ProvenanceInfo domain_of: - ProvenanceInfo range: string created: name: created from_schema: https://w3id.org/gocam rank: 1000 slot_uri: dct:created alias: created owner: ProvenanceInfo domain_of: - ProvenanceInfo range: string date: name: date from_schema: https://w3id.org/gocam rank: 1000 slot_uri: dct:date alias: date owner: ProvenanceInfo domain_of: - ProvenanceInfo range: string provided_by: name: provided_by from_schema: https://w3id.org/gocam rank: 1000 slot_uri: pav:providedBy alias: provided_by owner: ProvenanceInfo domain_of: - ProvenanceInfo range: string","title":"Class: ProvenanceInfo"},{"location":"ProvenanceInfo/#class-provenanceinfo","text":"Provenance information for an object URI: gocam:ProvenanceInfo classDiagram class ProvenanceInfo click ProvenanceInfo href \"../ProvenanceInfo\" ProvenanceInfo : contributor ProvenanceInfo : created ProvenanceInfo : date ProvenanceInfo : provided_by","title":"Class: ProvenanceInfo"},{"location":"ProvenanceInfo/#slots","text":"Name Cardinality and Range Description Inheritance contributor 0..1 String direct created 0..1 String direct date 0..1 String direct provided_by 0..1 String direct","title":"Slots"},{"location":"ProvenanceInfo/#usages","text":"used by used in type used Model provenances range ProvenanceInfo Activity provenances range ProvenanceInfo EvidenceItem provenances range ProvenanceInfo Association provenances range ProvenanceInfo EnabledByAssociation provenances range ProvenanceInfo EnabledByGeneProductAssociation provenances range ProvenanceInfo EnabledByProteinComplexAssociation provenances range ProvenanceInfo CausalAssociation provenances range ProvenanceInfo TermAssociation provenances range ProvenanceInfo MolecularFunctionAssociation provenances range ProvenanceInfo BiologicalProcessAssociation provenances range ProvenanceInfo CellularAnatomicalEntityAssociation provenances range ProvenanceInfo CellTypeAssociation provenances range ProvenanceInfo GrossAnatomyAssociation provenances range ProvenanceInfo MoleculeAssociation provenances range ProvenanceInfo","title":"Usages"},{"location":"ProvenanceInfo/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"ProvenanceInfo/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"ProvenanceInfo/#mappings","text":"Mapping Type Mapped Value self gocam:ProvenanceInfo native gocam:ProvenanceInfo","title":"Mappings"},{"location":"ProvenanceInfo/#linkml-source","text":"","title":"LinkML Source"},{"location":"ProvenanceInfo/#direct","text":"name: ProvenanceInfo description: Provenance information for an object from_schema: https://w3id.org/gocam attributes: contributor: name: contributor from_schema: https://w3id.org/gocam rank: 1000 slot_uri: dct:contributor domain_of: - ProvenanceInfo created: name: created from_schema: https://w3id.org/gocam rank: 1000 slot_uri: dct:created domain_of: - ProvenanceInfo date: name: date from_schema: https://w3id.org/gocam rank: 1000 slot_uri: dct:date domain_of: - ProvenanceInfo provided_by: name: provided_by from_schema: https://w3id.org/gocam rank: 1000 slot_uri: pav:providedBy domain_of: - ProvenanceInfo","title":"Direct"},{"location":"ProvenanceInfo/#induced","text":"name: ProvenanceInfo description: Provenance information for an object from_schema: https://w3id.org/gocam attributes: contributor: name: contributor from_schema: https://w3id.org/gocam rank: 1000 slot_uri: dct:contributor alias: contributor owner: ProvenanceInfo domain_of: - ProvenanceInfo range: string created: name: created from_schema: https://w3id.org/gocam rank: 1000 slot_uri: dct:created alias: created owner: ProvenanceInfo domain_of: - ProvenanceInfo range: string date: name: date from_schema: https://w3id.org/gocam rank: 1000 slot_uri: dct:date alias: date owner: ProvenanceInfo domain_of: - ProvenanceInfo range: string provided_by: name: provided_by from_schema: https://w3id.org/gocam rank: 1000 slot_uri: pav:providedBy alias: provided_by owner: ProvenanceInfo domain_of: - ProvenanceInfo range: string","title":"Induced"},{"location":"PublicationObject/","text":"Class: PublicationObject An object that represents a publication or other kind of reference URI: gocam:PublicationObject classDiagram class PublicationObject click PublicationObject href \"../PublicationObject\" Object <|-- PublicationObject click Object href \"../Object\" PublicationObject : abstract_text PublicationObject : full_text PublicationObject : id PublicationObject : label PublicationObject : obsolete PublicationObject : type Inheritance Object PublicationObject Slots Name Cardinality and Range Description Inheritance abstract_text 0..1 String direct full_text 0..1 String direct id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object Usages used by used in type used EvidenceItem reference range PublicationObject Identifier and Mapping Information Valid ID Prefixes Instances of this class should have identifiers with one of the following prefixes: PMID GOREF DOI Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:PublicationObject native gocam:PublicationObject LinkML Source Direct name: PublicationObject id_prefixes: - PMID - GOREF - DOI description: An object that represents a publication or other kind of reference from_schema: https://w3id.org/gocam is_a: Object attributes: abstract_text: name: abstract_text from_schema: https://w3id.org/gocam rank: 1000 domain_of: - PublicationObject full_text: name: full_text from_schema: https://w3id.org/gocam rank: 1000 domain_of: - PublicationObject Induced name: PublicationObject id_prefixes: - PMID - GOREF - DOI description: An object that represents a publication or other kind of reference from_schema: https://w3id.org/gocam is_a: Object attributes: abstract_text: name: abstract_text from_schema: https://w3id.org/gocam rank: 1000 alias: abstract_text owner: PublicationObject domain_of: - PublicationObject range: string full_text: name: full_text from_schema: https://w3id.org/gocam rank: 1000 alias: full_text owner: PublicationObject domain_of: - PublicationObject range: string id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: PublicationObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: PublicationObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: PublicationObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: PublicationObject domain_of: - Object range: boolean","title":"Class: PublicationObject"},{"location":"PublicationObject/#class-publicationobject","text":"An object that represents a publication or other kind of reference URI: gocam:PublicationObject classDiagram class PublicationObject click PublicationObject href \"../PublicationObject\" Object <|-- PublicationObject click Object href \"../Object\" PublicationObject : abstract_text PublicationObject : full_text PublicationObject : id PublicationObject : label PublicationObject : obsolete PublicationObject : type","title":"Class: PublicationObject"},{"location":"PublicationObject/#inheritance","text":"Object PublicationObject","title":"Inheritance"},{"location":"PublicationObject/#slots","text":"Name Cardinality and Range Description Inheritance abstract_text 0..1 String direct full_text 0..1 String direct id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object","title":"Slots"},{"location":"PublicationObject/#usages","text":"used by used in type used EvidenceItem reference range PublicationObject","title":"Usages"},{"location":"PublicationObject/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"PublicationObject/#valid-id-prefixes","text":"Instances of this class should have identifiers with one of the following prefixes: PMID GOREF DOI","title":"Valid ID Prefixes"},{"location":"PublicationObject/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"PublicationObject/#mappings","text":"Mapping Type Mapped Value self gocam:PublicationObject native gocam:PublicationObject","title":"Mappings"},{"location":"PublicationObject/#linkml-source","text":"","title":"LinkML Source"},{"location":"PublicationObject/#direct","text":"name: PublicationObject id_prefixes: - PMID - GOREF - DOI description: An object that represents a publication or other kind of reference from_schema: https://w3id.org/gocam is_a: Object attributes: abstract_text: name: abstract_text from_schema: https://w3id.org/gocam rank: 1000 domain_of: - PublicationObject full_text: name: full_text from_schema: https://w3id.org/gocam rank: 1000 domain_of: - PublicationObject","title":"Direct"},{"location":"PublicationObject/#induced","text":"name: PublicationObject id_prefixes: - PMID - GOREF - DOI description: An object that represents a publication or other kind of reference from_schema: https://w3id.org/gocam is_a: Object attributes: abstract_text: name: abstract_text from_schema: https://w3id.org/gocam rank: 1000 alias: abstract_text owner: PublicationObject domain_of: - PublicationObject range: string full_text: name: full_text from_schema: https://w3id.org/gocam rank: 1000 alias: full_text owner: PublicationObject domain_of: - PublicationObject range: string id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: PublicationObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: PublicationObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: PublicationObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: PublicationObject domain_of: - Object range: boolean","title":"Induced"},{"location":"Sparqlpath/","text":"Type: Sparqlpath A string encoding a SPARQL Property Path. The value of the string MUST conform to SPARQL syntax and SHOULD dereference to zero or more valid objects within the current instance document when encoded as RDF. URI: xsd:string base : str uri : xsd:string repr : str Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam","title":"Type: Sparqlpath"},{"location":"Sparqlpath/#type-sparqlpath","text":"A string encoding a SPARQL Property Path. The value of the string MUST conform to SPARQL syntax and SHOULD dereference to zero or more valid objects within the current instance document when encoded as RDF. URI: xsd:string base : str uri : xsd:string repr : str","title":"Type: Sparqlpath"},{"location":"Sparqlpath/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Sparqlpath/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"String/","text":"Type: String A character string URI: xsd:string base : str uri : xsd:string Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam","title":"Type: String"},{"location":"String/#type-string","text":"A character string URI: xsd:string base : str uri : xsd:string","title":"Type: String"},{"location":"String/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"String/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"TaxonTermObject/","text":"Class: TaxonTermObject A term object that represents a taxon term from NCBITaxon URI: gocam:TaxonTermObject classDiagram class TaxonTermObject click TaxonTermObject href \"../TaxonTermObject\" TermObject <|-- TaxonTermObject click TermObject href \"../TermObject\" TaxonTermObject : id TaxonTermObject : label TaxonTermObject : obsolete TaxonTermObject : type Inheritance Object TermObject TaxonTermObject Slots Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object Usages used by used in type used Model taxon range TaxonTermObject Identifier and Mapping Information Valid ID Prefixes Instances of this class should have identifiers with one of the following prefixes: NCBITaxon Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:TaxonTermObject native gocam:TaxonTermObject LinkML Source Direct name: TaxonTermObject id_prefixes: - NCBITaxon description: A term object that represents a taxon term from NCBITaxon from_schema: https://w3id.org/gocam is_a: TermObject Induced name: TaxonTermObject id_prefixes: - NCBITaxon description: A term object that represents a taxon term from NCBITaxon from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: TaxonTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: TaxonTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: TaxonTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: TaxonTermObject domain_of: - Object range: boolean","title":"Class: TaxonTermObject"},{"location":"TaxonTermObject/#class-taxontermobject","text":"A term object that represents a taxon term from NCBITaxon URI: gocam:TaxonTermObject classDiagram class TaxonTermObject click TaxonTermObject href \"../TaxonTermObject\" TermObject <|-- TaxonTermObject click TermObject href \"../TermObject\" TaxonTermObject : id TaxonTermObject : label TaxonTermObject : obsolete TaxonTermObject : type","title":"Class: TaxonTermObject"},{"location":"TaxonTermObject/#inheritance","text":"Object TermObject TaxonTermObject","title":"Inheritance"},{"location":"TaxonTermObject/#slots","text":"Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object","title":"Slots"},{"location":"TaxonTermObject/#usages","text":"used by used in type used Model taxon range TaxonTermObject","title":"Usages"},{"location":"TaxonTermObject/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"TaxonTermObject/#valid-id-prefixes","text":"Instances of this class should have identifiers with one of the following prefixes: NCBITaxon","title":"Valid ID Prefixes"},{"location":"TaxonTermObject/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"TaxonTermObject/#mappings","text":"Mapping Type Mapped Value self gocam:TaxonTermObject native gocam:TaxonTermObject","title":"Mappings"},{"location":"TaxonTermObject/#linkml-source","text":"","title":"LinkML Source"},{"location":"TaxonTermObject/#direct","text":"name: TaxonTermObject id_prefixes: - NCBITaxon description: A term object that represents a taxon term from NCBITaxon from_schema: https://w3id.org/gocam is_a: TermObject","title":"Direct"},{"location":"TaxonTermObject/#induced","text":"name: TaxonTermObject id_prefixes: - NCBITaxon description: A term object that represents a taxon term from NCBITaxon from_schema: https://w3id.org/gocam is_a: TermObject attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: TaxonTermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: TaxonTermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: TaxonTermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: TaxonTermObject domain_of: - Object range: boolean","title":"Induced"},{"location":"TermAssociation/","text":"Class: TermAssociation An association between an activity and a term, potentially with extensions NOTE : this is an abstract class and should not be instantiated directly URI: gocam:TermAssociation classDiagram class TermAssociation click TermAssociation href \"../TermAssociation\" Association <|-- TermAssociation click Association href \"../Association\" TermAssociation <|-- MolecularFunctionAssociation click MolecularFunctionAssociation href \"../MolecularFunctionAssociation\" TermAssociation <|-- BiologicalProcessAssociation click BiologicalProcessAssociation href \"../BiologicalProcessAssociation\" TermAssociation <|-- CellularAnatomicalEntityAssociation click CellularAnatomicalEntityAssociation href \"../CellularAnatomicalEntityAssociation\" TermAssociation <|-- CellTypeAssociation click CellTypeAssociation href \"../CellTypeAssociation\" TermAssociation <|-- GrossAnatomyAssociation click GrossAnatomyAssociation href \"../GrossAnatomyAssociation\" TermAssociation <|-- MoleculeAssociation click MoleculeAssociation href \"../MoleculeAssociation\" TermAssociation : evidence TermAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" TermAssociation : provenances TermAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" TermAssociation : term TermAssociation --> \"0..1\" TermObject : term click TermObject href \"../TermObject\" TermAssociation : type Inheritance Association TermAssociation MolecularFunctionAssociation BiologicalProcessAssociation CellularAnatomicalEntityAssociation CellTypeAssociation GrossAnatomyAssociation MoleculeAssociation Slots Name Cardinality and Range Description Inheritance term 0..1 TermObject The ontology term that describes the nature of the association direct type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:TermAssociation native gocam:TermAssociation LinkML Source Direct name: TermAssociation description: An association between an activity and a term, potentially with extensions from_schema: https://w3id.org/gocam is_a: Association abstract: true attributes: term: name: term description: The ontology term that describes the nature of the association from_schema: https://w3id.org/gocam domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: TermObject Induced name: TermAssociation description: An association between an activity and a term, potentially with extensions from_schema: https://w3id.org/gocam is_a: Association abstract: true attributes: term: name: term description: The ontology term that describes the nature of the association from_schema: https://w3id.org/gocam alias: term owner: TermAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: TermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: TermAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: TermAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: TermAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Class: TermAssociation"},{"location":"TermAssociation/#class-termassociation","text":"An association between an activity and a term, potentially with extensions NOTE : this is an abstract class and should not be instantiated directly URI: gocam:TermAssociation classDiagram class TermAssociation click TermAssociation href \"../TermAssociation\" Association <|-- TermAssociation click Association href \"../Association\" TermAssociation <|-- MolecularFunctionAssociation click MolecularFunctionAssociation href \"../MolecularFunctionAssociation\" TermAssociation <|-- BiologicalProcessAssociation click BiologicalProcessAssociation href \"../BiologicalProcessAssociation\" TermAssociation <|-- CellularAnatomicalEntityAssociation click CellularAnatomicalEntityAssociation href \"../CellularAnatomicalEntityAssociation\" TermAssociation <|-- CellTypeAssociation click CellTypeAssociation href \"../CellTypeAssociation\" TermAssociation <|-- GrossAnatomyAssociation click GrossAnatomyAssociation href \"../GrossAnatomyAssociation\" TermAssociation <|-- MoleculeAssociation click MoleculeAssociation href \"../MoleculeAssociation\" TermAssociation : evidence TermAssociation --> \"*\" EvidenceItem : evidence click EvidenceItem href \"../EvidenceItem\" TermAssociation : provenances TermAssociation --> \"*\" ProvenanceInfo : provenances click ProvenanceInfo href \"../ProvenanceInfo\" TermAssociation : term TermAssociation --> \"0..1\" TermObject : term click TermObject href \"../TermObject\" TermAssociation : type","title":"Class: TermAssociation"},{"location":"TermAssociation/#inheritance","text":"Association TermAssociation MolecularFunctionAssociation BiologicalProcessAssociation CellularAnatomicalEntityAssociation CellTypeAssociation GrossAnatomyAssociation MoleculeAssociation","title":"Inheritance"},{"location":"TermAssociation/#slots","text":"Name Cardinality and Range Description Inheritance term 0..1 TermObject The ontology term that describes the nature of the association direct type 0..1 String Association evidence * EvidenceItem Association provenances * ProvenanceInfo Association","title":"Slots"},{"location":"TermAssociation/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"TermAssociation/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"TermAssociation/#mappings","text":"Mapping Type Mapped Value self gocam:TermAssociation native gocam:TermAssociation","title":"Mappings"},{"location":"TermAssociation/#linkml-source","text":"","title":"LinkML Source"},{"location":"TermAssociation/#direct","text":"name: TermAssociation description: An association between an activity and a term, potentially with extensions from_schema: https://w3id.org/gocam is_a: Association abstract: true attributes: term: name: term description: The ontology term that describes the nature of the association from_schema: https://w3id.org/gocam domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: TermObject","title":"Direct"},{"location":"TermAssociation/#induced","text":"name: TermAssociation description: An association between an activity and a term, potentially with extensions from_schema: https://w3id.org/gocam is_a: Association abstract: true attributes: term: name: term description: The ontology term that describes the nature of the association from_schema: https://w3id.org/gocam alias: term owner: TermAssociation domain_of: - EvidenceItem - EnabledByAssociation - TermAssociation range: TermObject type: name: type from_schema: https://w3id.org/gocam rank: 1000 designates_type: true alias: type owner: TermAssociation domain_of: - Association - Object range: string evidence: name: evidence from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: evidence owner: TermAssociation domain_of: - Association range: EvidenceItem inlined: true provenances: name: provenances from_schema: https://w3id.org/gocam multivalued: true alias: provenances owner: TermAssociation domain_of: - Model - Activity - EvidenceItem - Association range: ProvenanceInfo inlined: true inlined_as_list: true","title":"Induced"},{"location":"TermObject/","text":"Class: TermObject An abstract class for all ontology term objects NOTE : this is an abstract class and should not be instantiated directly URI: gocam:TermObject classDiagram class TermObject click TermObject href \"../TermObject\" Object <|-- TermObject click Object href \"../Object\" TermObject <|-- EvidenceTermObject click EvidenceTermObject href \"../EvidenceTermObject\" TermObject <|-- MolecularFunctionTermObject click MolecularFunctionTermObject href \"../MolecularFunctionTermObject\" TermObject <|-- BiologicalProcessTermObject click BiologicalProcessTermObject href \"../BiologicalProcessTermObject\" TermObject <|-- CellularAnatomicalEntityTermObject click CellularAnatomicalEntityTermObject href \"../CellularAnatomicalEntityTermObject\" TermObject <|-- MoleculeTermObject click MoleculeTermObject href \"../MoleculeTermObject\" TermObject <|-- CellTypeTermObject click CellTypeTermObject href \"../CellTypeTermObject\" TermObject <|-- GrossAnatomicalStructureTermObject click GrossAnatomicalStructureTermObject href \"../GrossAnatomicalStructureTermObject\" TermObject <|-- PhaseTermObject click PhaseTermObject href \"../PhaseTermObject\" TermObject <|-- InformationBiomacromoleculeTermObject click InformationBiomacromoleculeTermObject href \"../InformationBiomacromoleculeTermObject\" TermObject <|-- TaxonTermObject click TaxonTermObject href \"../TaxonTermObject\" TermObject <|-- PredicateTermObject click PredicateTermObject href \"../PredicateTermObject\" TermObject : id TermObject : label TermObject : obsolete TermObject : type Inheritance Object TermObject EvidenceTermObject MolecularFunctionTermObject BiologicalProcessTermObject CellularAnatomicalEntityTermObject MoleculeTermObject CellTypeTermObject GrossAnatomicalStructureTermObject PhaseTermObject InformationBiomacromoleculeTermObject TaxonTermObject PredicateTermObject Slots Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object Usages used by used in type used TermAssociation term range TermObject Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam Mappings Mapping Type Mapped Value self gocam:TermObject native gocam:TermObject LinkML Source Direct name: TermObject description: An abstract class for all ontology term objects from_schema: https://w3id.org/gocam is_a: Object abstract: true Induced name: TermObject description: An abstract class for all ontology term objects from_schema: https://w3id.org/gocam is_a: Object abstract: true attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: TermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: TermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: TermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: TermObject domain_of: - Object range: boolean","title":"Class: TermObject"},{"location":"TermObject/#class-termobject","text":"An abstract class for all ontology term objects NOTE : this is an abstract class and should not be instantiated directly URI: gocam:TermObject classDiagram class TermObject click TermObject href \"../TermObject\" Object <|-- TermObject click Object href \"../Object\" TermObject <|-- EvidenceTermObject click EvidenceTermObject href \"../EvidenceTermObject\" TermObject <|-- MolecularFunctionTermObject click MolecularFunctionTermObject href \"../MolecularFunctionTermObject\" TermObject <|-- BiologicalProcessTermObject click BiologicalProcessTermObject href \"../BiologicalProcessTermObject\" TermObject <|-- CellularAnatomicalEntityTermObject click CellularAnatomicalEntityTermObject href \"../CellularAnatomicalEntityTermObject\" TermObject <|-- MoleculeTermObject click MoleculeTermObject href \"../MoleculeTermObject\" TermObject <|-- CellTypeTermObject click CellTypeTermObject href \"../CellTypeTermObject\" TermObject <|-- GrossAnatomicalStructureTermObject click GrossAnatomicalStructureTermObject href \"../GrossAnatomicalStructureTermObject\" TermObject <|-- PhaseTermObject click PhaseTermObject href \"../PhaseTermObject\" TermObject <|-- InformationBiomacromoleculeTermObject click InformationBiomacromoleculeTermObject href \"../InformationBiomacromoleculeTermObject\" TermObject <|-- TaxonTermObject click TaxonTermObject href \"../TaxonTermObject\" TermObject <|-- PredicateTermObject click PredicateTermObject href \"../PredicateTermObject\" TermObject : id TermObject : label TermObject : obsolete TermObject : type","title":"Class: TermObject"},{"location":"TermObject/#inheritance","text":"Object TermObject EvidenceTermObject MolecularFunctionTermObject BiologicalProcessTermObject CellularAnatomicalEntityTermObject MoleculeTermObject CellTypeTermObject GrossAnatomicalStructureTermObject PhaseTermObject InformationBiomacromoleculeTermObject TaxonTermObject PredicateTermObject","title":"Inheritance"},{"location":"TermObject/#slots","text":"Name Cardinality and Range Description Inheritance id 1 Uriorcurie Object label 0..1 String Object type 0..1 Uriorcurie Object obsolete 0..1 Boolean Object","title":"Slots"},{"location":"TermObject/#usages","text":"used by used in type used TermAssociation term range TermObject","title":"Usages"},{"location":"TermObject/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"TermObject/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"TermObject/#mappings","text":"Mapping Type Mapped Value self gocam:TermObject native gocam:TermObject","title":"Mappings"},{"location":"TermObject/#linkml-source","text":"","title":"LinkML Source"},{"location":"TermObject/#direct","text":"name: TermObject description: An abstract class for all ontology term objects from_schema: https://w3id.org/gocam is_a: Object abstract: true","title":"Direct"},{"location":"TermObject/#induced","text":"name: TermObject description: An abstract class for all ontology term objects from_schema: https://w3id.org/gocam is_a: Object abstract: true attributes: id: name: id from_schema: https://w3id.org/gocam identifier: true alias: id owner: TermObject domain_of: - Model - Activity - Object range: uriorcurie required: true label: name: label from_schema: https://w3id.org/gocam rank: 1000 slot_uri: rdfs:label alias: label owner: TermObject domain_of: - Object range: string type: name: type from_schema: https://w3id.org/gocam designates_type: true alias: type owner: TermObject domain_of: - Association - Object range: uriorcurie obsolete: name: obsolete from_schema: https://w3id.org/gocam rank: 1000 alias: obsolete owner: TermObject domain_of: - Object range: boolean","title":"Induced"},{"location":"Time/","text":"Type: Time A time object represents a (local) time of day, independent of any particular day URI: xsd:time base : XSDTime uri : xsd:time repr : str Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam","title":"Type: Time"},{"location":"Time/#type-time","text":"A time object represents a (local) time of day, independent of any particular day URI: xsd:time base : XSDTime uri : xsd:time repr : str","title":"Type: Time"},{"location":"Time/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Time/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"Uri/","text":"Type: Uri a complete URI URI: xsd:anyURI base : URI uri : xsd:anyURI repr : str Comments in RDF serializations a slot with range of uri is treated as a literal or type xsd:anyURI unless it is an identifier or a reference to an identifier, in which case it is translated directly to a node Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam","title":"Type: Uri"},{"location":"Uri/#type-uri","text":"a complete URI URI: xsd:anyURI base : URI uri : xsd:anyURI repr : str","title":"Type: Uri"},{"location":"Uri/#comments","text":"in RDF serializations a slot with range of uri is treated as a literal or type xsd:anyURI unless it is an identifier or a reference to an identifier, in which case it is translated directly to a node","title":"Comments"},{"location":"Uri/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Uri/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"Uriorcurie/","text":"Type: Uriorcurie a URI or a CURIE URI: xsd:anyURI base : URIorCURIE uri : xsd:anyURI repr : str Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam","title":"Type: Uriorcurie"},{"location":"Uriorcurie/#type-uriorcurie","text":"a URI or a CURIE URI: xsd:anyURI base : URIorCURIE uri : xsd:anyURI repr : str","title":"Type: Uriorcurie"},{"location":"Uriorcurie/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Uriorcurie/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"about/","text":"gocam GO CAM Data Model (Python)","title":"About"},{"location":"about/#gocam","text":"GO CAM Data Model (Python)","title":"gocam"},{"location":"abstract_text/","text":"Slot: abstract_text URI: gocam:abstract_text Applicable Classes Name Description Modifies Slot PublicationObject An object that represents a publication or other kind of reference no Properties Range: String Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam LinkML Source name: abstract_text from_schema: https://w3id.org/gocam rank: 1000 alias: abstract_text owner: PublicationObject domain_of: - PublicationObject range: string","title":"Slot: abstract_text"},{"location":"abstract_text/#slot-abstract_text","text":"URI: gocam:abstract_text","title":"Slot: abstract_text"},{"location":"abstract_text/#applicable-classes","text":"Name Description Modifies Slot PublicationObject An object that represents a publication or other kind of reference no","title":"Applicable Classes"},{"location":"abstract_text/#properties","text":"Range: String","title":"Properties"},{"location":"abstract_text/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"abstract_text/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"abstract_text/#linkml-source","text":"name: abstract_text from_schema: https://w3id.org/gocam rank: 1000 alias: abstract_text owner: PublicationObject domain_of: - PublicationObject range: string","title":"LinkML Source"},{"location":"activities/","text":"Slot: activities All of the activities that are part of the model URI: gocam:activities Applicable Classes Name Description Modifies Slot Model A model of a biological program consisting of a set of causally connected act... no Properties Range: Activity Multivalued: True Identifier and Mapping Information Schema Source from schema: https://w3id.org/gocam LinkML Source name: activities description: All of the activities that are part of the model from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: activities owner: Model domain_of: - Model range: Activity inlined: true inlined_as_list: true","title":"Slot: activities"},{"location":"activities/#slot-activities","text":"All of the activities that are part of the model URI: gocam:activities","title":"Slot: activities"},{"location":"activities/#applicable-classes","text":"Name Description Modifies Slot Model A model of a biological program consisting of a set of causally connected act... no","title":"Applicable Classes"},{"location":"activities/#properties","text":"Range: Activity Multivalued: True","title":"Properties"},{"location":"activities/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"activities/#schema-source","text":"from schema: https://w3id.org/gocam","title":"Schema Source"},{"location":"activities/#linkml-source","text":"name: activities description: All of the activities that are part of the model from_schema: https://w3id.org/gocam rank: 1000 multivalued: true alias: activities owner: Model domain_of: - 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- -EvidenceItem -An individual piece of evidence that is associated with an assertion in a mod... +EnabledByAssociation +An association between an activity and the gene product or complex that carri... no -CellularAnatomicalEntityAssociation -An association between an activity and a cellular anatomical entity term +EnabledByGeneProductAssociation +An association between an activity and a gene product yes -MoleculeAssociation -An association between an activity and a molecule term +GrossAnatomyAssociation +An association between an activity and a gross anatomical structure term yes @@ -343,8 +338,8 @@

    Applicable Classes

    no -EnabledByProteinComplexAssociation -An association between an activity and a protein complex +BiologicalProcessAssociation +An association between an activity and a biological process term yes @@ -353,25 +348,30 @@

    Applicable Classes

    yes -EnabledByGeneProductAssociation -An association between an activity and a gene product +CellTypeAssociation +An association between an activity and a cell type term yes -CellTypeAssociation -An association between an activity and a cell type term +EnabledByProteinComplexAssociation +An association between an activity and a protein complex yes -EnabledByAssociation -An association between an activity and the gene product or complex that carri... -no +CellularAnatomicalEntityAssociation +An association between an activity and a cellular anatomical entity term +yes -BiologicalProcessAssociation -An association between an activity and a biological process term +MoleculeAssociation +An association between an activity and a molecule term yes + +EvidenceItem +An individual piece of evidence that is associated with an assertion in a mod... +no +

    Properties

    diff --git a/type/index.html b/type/index.html index 98e6f91..9b4b4ed 100644 --- a/type/index.html +++ b/type/index.html @@ -318,38 +318,38 @@

    Applicable Classes

    -CellularAnatomicalEntityAssociation -An association between an activity and a cellular anatomical entity term +TaxonTermObject +A term object that represents a taxon term from NCBITaxon no -PublicationObject -An object that represents a publication or other kind of reference +PhaseTermObject +A term object that represents a phase term from GO or UBERON no -MoleculeAssociation -An association between an activity and a molecule term +PublicationObject +An object that represents a publication or other kind of reference no -CausalAssociation -A causal association between two activities +BiologicalProcessAssociation +An association between an activity and a biological process term no -CellularAnatomicalEntityTermObject -A term object that represents a cellular anatomical entity term from GO +TermObject +An abstract class for all ontology term objects no -TaxonTermObject -A term object that represents a taxon term from NCBITaxon +EnabledByProteinComplexAssociation +An association between an activity and a protein complex no -GeneProductTermObject -A term object that represents a gene product term from GO or UniProtKB +MoleculeAssociation +An association between an activity and a molecule term no @@ -358,18 +358,23 @@

    Applicable Classes

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    Applicable Classes

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    Applicable Classes

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