From 9bd8a8bc9361e6245568448ded55ed63de93beaa Mon Sep 17 00:00:00 2001 From: pgaudet Date: Mon, 16 Oct 2023 15:41:22 +0200 Subject: [PATCH] Update gorules_test_errors.gaf Fixed test 20-4 --- docs/gorules_test_errors.gaf | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/docs/gorules_test_errors.gaf b/docs/gorules_test_errors.gaf index 305c074c..3f56d18e 100644 --- a/docs/gorules_test_errors.gaf +++ b/docs/gorules_test_errors.gaf @@ -104,7 +104,7 @@ TriTrypDB Tb11.02.5420b Tb11.02.5420b located_in GO:0016021 GO_REF:0000002 ISO G ! FAILS GORULE:0000020 - TEST 3 - obsolete term in 'with' (column 8) with no replacement MGI:1100518 Smad7 bla involved_in GO:0017015 MGI:MGI:3836072|PMID:18952608 IC GO:0060389 P GORULE:0000020-3 SMAD protein_coding_gene taxon:10090 20090211 BHF-UCL ! FAILS GORULE:0000020 - TEST 4 - obsolete term in 'extension' (column 16) with no replacement -UniProtKB O76187 darA enables GO:0004672 PMID:9802899 IPI UniProtKB:P34149 P GORULE:0000020-4 Darlin darA protein taxon:44689 20100205 UniProt involved_in(GO:0090503) +UniProtKB O76187 darA enables GO:0004672 PMID:9802899 IPI UniProtKB:P34149 F GORULE:0000020-4 Darlin darA protein taxon:44689 20100205 UniProt involved_in(GO:0090503) ! FAILS GORULE:0000020 - TEST 5 - obsolete term in 'extension' (column 16) with a replacement UniProtKB O76187 darA enables GO:0004672 PMID:9802899 IPI UniProtKB:P34149 F GORULE:0000020-5 Darlin darA protein taxon:44689 20100205 UniProt involved_in(GO:0014067) ! FAILS GORULE:0000027 - TEST 1 - bad GO ID syntax