From 0bbef0ab0cc996fa1365d618ef93bcb851a8cc51 Mon Sep 17 00:00:00 2001 From: Patrick Kalita Date: Mon, 29 Apr 2024 15:59:07 -0700 Subject: [PATCH] Remove parameter pointing to removed goref location --- pipeline/go-association-transit/goat/parse_into_gpad.py | 1 - 1 file changed, 1 deletion(-) diff --git a/pipeline/go-association-transit/goat/parse_into_gpad.py b/pipeline/go-association-transit/goat/parse_into_gpad.py index 45e23deff..b23102810 100644 --- a/pipeline/go-association-transit/goat/parse_into_gpad.py +++ b/pipeline/go-association-transit/goat/parse_into_gpad.py @@ -17,7 +17,6 @@ def process_single_file(source_file, gpis, ontology, out_dir, annotation_inferen ontology = cached_ontology.from_file(ontology) config = assocparser.AssocParserConfig( ontology=ontology, - goref_metadata=metadata.yamldown_lookup(os.path.join(metadata_dir, "gorefs")), rule_metadata=metadata.yamldown_lookup(os.path.join(metadata_dir, "rules")), rule_contexts=[], suppress_rule_reporting_tags=[],