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GO:0006397 | mRNA processing | IEA with IPR030843  IPR030844 IPR030844 #5559

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ValWood opened this issue Nov 29, 2024 · 3 comments
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@ValWood
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ValWood commented Nov 29, 2024

  • InterPro ID / label

GO:0006397 | mRNA processing | IEA with IPR030843

  • Example sequences with problematic annotation (ID + gene/protein name):

  • Description of issue

this seems incorrect at least for pan2
https://www.pombase.org/gene/SPAC22G7.04

pan2 is a P-body protein involved in "
GO:0000289 | nuclear-transcribed mRNA poly(A) tail shortening
which makes it catabolism rather than processing (which is maturation)

@ValWood
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ValWood commented Nov 29, 2024

same for GO:0006397 | mRNA processing | IEA with IPR030844

@ValWood ValWood changed the title GO:0006397 | mRNA processing | IEA with IPR030843 GO:0006397 | mRNA processing | IEA with IPR030843  IPR030844 Nov 29, 2024
@ValWood ValWood changed the title GO:0006397 | mRNA processing | IEA with IPR030843  IPR030844 GO:0006397 | mRNA processing | IEA with IPR030843  IPR030844 IPR030844 Nov 29, 2024
@ValWood
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ValWood commented Nov 29, 2024

and
https://www.pombase.org/gene/SPBC336.14c

GO:0006397 mRNA processing IEA with IPR030844

GO:0006397
mRNA processing
IEA with IPR030844

@blazaropinto
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Hi Val,
Thank you for this. I agree, so I remove the term from those entries. The changes will be available in the next InterPro release.
Best,
Beatriz

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