Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Indent facets for ontology fields based on lineage #168

Open
cmungall opened this issue Jan 14, 2015 · 3 comments
Open

Indent facets for ontology fields based on lineage #168

cmungall opened this issue Jan 14, 2015 · 3 comments
Milestone

Comments

@cmungall
Copy link
Member

Inspired by:

For class detail pages, for facets like "annotation", rather than a flat list ordered descending by annotation count, it would be good to (1) indent the list of terms according to their inter-relationships and (2) remove terms not in the current lineage ( see GO-688 )

I believe we previously thought this required Solr4 (sorry if this is a dupe)

However, I don't think this is required. Everything should be there in the transitivity graph used to construct the inferred tree view.

@cmungall
Copy link
Member Author

Example:

http://amigo.geneontology.org/amigo/term/GO:0003682

This:

screen shot 2015-01-13 at 8 13 34 pm

Should look like this:

http://amigo.geneontology.org/amigo/term/GO:0003682#display-lineage-tab

screen shot 2015-01-13 at 8 18 31 pm

(or at least have some kind of indentation approximating this; relation symbols not required)

At first this may seem like less useful, as we only pre-compute one level down. But in fact this is fine, users can drill down if they need to

@cmungall
Copy link
Member Author

(without BFO of course)

@kltm
Copy link
Member

kltm commented Jan 14, 2015

Actually, mostly a dupe of berkeleybop/bbop-js#30.

@kltm kltm modified the milestone: wishlist Jul 27, 2016
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Projects
None yet
Development

No branches or pull requests

2 participants