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README.html
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<!DOCTYPE html>
<html>
<head>
<meta content="text/html; charset=utf-8" http-equiv="Content-Type">
<meta name="viewport" content="width=1034, initial-scale=1.0">
<meta name="description" content="Find out how to cite the Wily-DNA-Editor, the fair usage and the legal informations.">
<title>The Wily DNA Editor - About</title>
<style type="text/css">
body {
color: black;
background-color: white;
font-size: 100.01%;
margin: 1em;
padding: 0;
text-align: center
line-height: 1.5;
}
div#page { text-align: left;
margin: auto;
width: 1024px;
}
div#WDE_footer {
margin: 12px 0px 3px 0px;
font-size: 80%;
font-family: Arial;
font-weight: bold;
color: rgb(75, 75, 75);
}
div#WDE_no_javascript {
width:900px;
border: 2px solid #ccccff;
margin: 4px 0px 0px 0px;
clear: left;
float: left;
background-color: rgb(255, 0, 0);
overflow:hidden;
padding: 0px;
}
.WDE_tab_page {
width:900px;
border: 2px solid #ccccff;
clear: left;
float: left;
background-color: rgb(255, 255, 230);
overflow:hidden;
padding: 0px;
line-height: 1.2;
}
div#WDE_space {
padding: 8px;
line-height: 2;
}
div#WDE_enzymes_spacer{
font-size: 80%;
line-height: 1.5;
}
.WDE_tab_page_no_border {
width:900px;
clear: left;
float: left;
background-color: rgb(255, 255, 230);
overflow:hidden;
}
div#menuBar { float:left; width:900px; padding: 0px; margin: 8px 0 0 8px; line-height:normal; text-align: left; }
div#menuBar ul { margin:0px; padding: 0px; list-style:none; }
div#menuBar li { float:left; margin:0; border: 2px solid #ccccff; border-bottom-width: 0; }
div#menuBar a { top: 2px; display:block; padding: 0.24em 1em; font-weight: bold; cursor: pointer; }
div#WDE_top_bar { width: 900px; padding: 0px; border: 2px solid #ccccff;}
.WDE_background { background-color:#ccccff; }
.WDE_top_bar_table { border:0; width:100%; }
.WDE_top_bar_cell { border:0; padding:0.4em;background-color:#ccccff; }
.WDE_top_bar_title { font-size: 2.2em; font-weight:700; }
.WDE_top_bar_explain { font-size: 1.0em; font-weight:500 }
.WDE_top_bar_link { font-weight:bold }
.WDE_table_no_border { border:0; width:100%; empty-cells:show; }
.WDE_note { background-color:rgb(255,120,60); padding:0px; }
textarea#sequenceTextarea { font-family:Courier,monospace; width:95%; }
</style>
</head>
<body>
<div id="page">
<div id="WDE_complete">
<div id="WDE_top_bar">
<table class="WDE_top_bar_table">
<colgroup>
<col width="60%" class="WDE_background">
<col width="20%" class="WDE_background">
<col width="20%" class="WDE_background">
</colgroup>
<tr>
<td class="WDE_top_bar_cell" rowspan="2"><a class="WDE_top_bar_title">The Wily DNA Editor</a><br>
<a class="WDE_top_bar_explain" id="top">master DNA sequences, plasmids and restriction enzyme digests</a>
</td>
<td class="WDE_top_bar_cell"><a class="WDE_top_bar_link" href="https://wily-dna-editor.com">Wily-DNA-Editor</a>
</td>
<td class="WDE_top_bar_cell"><a class="WDE_top_bar_link" href="https://github.com/gear-genomics/wily-dna-editor">Source Code</a>
</td>
</tr>
<tr>
<td class="WDE_top_bar_cell"><a class="WDE_top_bar_link" href="https://wily-dna-editor.com/help.html">Help</a>
</td>
<td class="WDE_top_bar_cell"><a class="WDE_top_bar_link" href="https://wily-dna-editor.com/more.html">More...</a>
</td>
</tr>
</table>
</div>
<div id="WDE_main_tab">
<h3>The Wily DNA Editor is an everyday lab tool for handling sequences</h3>
<p>
...running with pure JavaScript in your browser - no need to install anything.
</p>
<h3>Try it out:</h3>
<p>
<a href="https://wily-dna-editor.com">
The Wily-DNA-Editor at wily-dna-editor.com
</a>
<br />
<a href="http://gear.embl.de/wily-dna-editor">
The Wily-DNA-Editor at gear.embl.de/wily-dna-editor
</a>
</p>
<br />
<h3>Download Program and Source Code</h3>
<p>
<a href="https://github.com/gear-genomics/wily-dna-editor">
Source code is available at https://github.com/gear-genomics/wily-dna-editor.
</a>
</p>
<br />
<h3>The Wily DNA Editor can do basic DNA/RNA operations</h3>
<p>
<img src="client/src/static/img/main.jpg" alt="Screenshot"><br />
Reverse-Complement DNA, remove non-IUPAC letters and change upper/lower case...
</p>
<br />
<h3>The Wily DNA Editor finds restriction sites</h3>
<p>
<img src="client/src/static/img/digest.jpg" alt="Screenshot"><br />
Find restriction sites, select them and highlight the selected in sequence...
</p>
<br />
<h3>The Wily DNA Editor draws graphic maps</h3>
<p>
<img src="client/src/static/img/map.jpg" alt="Screenshot"><br />
Draw restriction maps with or without features for linear an circular sequences...
</p>
<br />
<h3>The Wily DNA Editor visualize a digest as gel picture</h3>
<p>
<img src="client/src/static/img/gel.jpg" alt="Screenshot"><br />
Simulate band indensity or draw all bands black...
</p>
<br />
<h3>The Wily DNA Editor translates DNA sequences</h3>
<p>
<img src="client/src/static/img/translate.jpg" alt="Screenshot"><br />
Translate DNA in one, three or six frames...
</p>
<br />
<h3>The Wily DNA Editor handles genbank features</h3>
<p>
<img src="client/src/static/img/features.jpg" alt="Screenshot"><br />
Use features to annotate regions in the DNA...
</p>
<br />
<h3>The Wily DNA Editor gives you full conrol</h3>
<p>
All calculation happens on your machine. You can load and save sequences in fasta and genbank format.<br />
Pictures can be saved as html or svg files to disk and modified for publication...
</p>
<br />
</div>
</div>
</div>
</body>
</html>