From 4f85bc579975993cc8cebca72ebb18cb105b01a1 Mon Sep 17 00:00:00 2001
From: jdidion <github@didion.net>
Date: Thu, 22 Feb 2024 09:22:35 -0800
Subject: [PATCH] rever reformatting

---
 fgpyo/fasta/builder.py                    |  21 +-
 fgpyo/fasta/tests/test_builder.py         |  22 +-
 fgpyo/io/tests/test_io.py                 |  27 +--
 fgpyo/sam/__init__.py                     |  12 +-
 fgpyo/sam/tests/test_sam.py               |   4 +-
 fgpyo/sam/tests/test_template_iterator.py |   4 +-
 fgpyo/tests/test_read_structure.py        |  42 +---
 fgpyo/util/inspect.py                     |  39 +---
 fgpyo/util/logging.py                     |  19 +-
 fgpyo/util/tests/test_logging.py          |   7 +-
 fgpyo/util/tests/test_metric.py           |  17 +-
 fgpyo/util/types.py                       |   8 +-
 fgpyo/vcf/builder.py                      |   6 +-
 fgpyo/vcf/tests/test_builder.py           |  22 +-
 poetry.lock                               | 246 +++++++++++++++++-----
 pyproject.toml                            |   3 +-
 16 files changed, 238 insertions(+), 261 deletions(-)

diff --git a/fgpyo/fasta/builder.py b/fgpyo/fasta/builder.py
index ea60b244..5a7a90f6 100755
--- a/fgpyo/fasta/builder.py
+++ b/fgpyo/fasta/builder.py
@@ -49,6 +49,7 @@ def samtools_dict(*args: Any) -> None:
     def samtools_faidx(*args: Any) -> None:
         pass
 
+
 else:
     from pysam import dict as samtools_dict
     from pysam import faidx as samtools_faidx
@@ -91,10 +92,7 @@ class ContigBuilder:
     """
 
     def __init__(
-        self,
-        name: str,
-        assembly: str,
-        species: str,
+        self, name: str, assembly: str, species: str,
     ):
         self.name = name
         self.assembly = assembly
@@ -146,10 +144,7 @@ class FastaBuilder:
     """
 
     def __init__(
-        self,
-        assembly: str = "testassembly",
-        species: str = "testspecies",
-        line_length: int = 80,
+        self, assembly: str = "testassembly", species: str = "testspecies", line_length: int = 80,
     ):
         self.assembly: str = assembly
         self.species: str = species
@@ -161,10 +156,7 @@ def __getitem__(self, key: str) -> ContigBuilder:
         return self.__contig_builders[key]
 
     def add(
-        self,
-        name: str,
-        assembly: Optional[str] = None,
-        species: Optional[str] = None,
+        self, name: str, assembly: Optional[str] = None, species: Optional[str] = None,
     ) -> ContigBuilder:
         """
         Creates and returns a new ContigBuilder for a contig with the provided name.
@@ -189,10 +181,7 @@ def add(
         self.__contig_builders[name] = builder
         return builder
 
-    def to_file(
-        self,
-        path: Path,
-    ) -> None:
+    def to_file(self, path: Path,) -> None:
         """
         Writes out the set of accumulated contigs to a FASTA file at the `path` given.
         Also generates the accompanying fasta index file (`.fa.fai`) and sequence
diff --git a/fgpyo/fasta/tests/test_builder.py b/fgpyo/fasta/tests/test_builder.py
index b3dbb438..a1db172a 100644
--- a/fgpyo/fasta/tests/test_builder.py
+++ b/fgpyo/fasta/tests/test_builder.py
@@ -25,17 +25,10 @@ def test_bases_length_from_ContigBuilder_add_default() -> None:
 
 
 @pytest.mark.parametrize(
-    "name, bases, times, length_bases",
-    [
-        ("chr1", "AAA", 3, 9),
-        ("chr2", "TTT", 10, 30),
-    ],
+    "name, bases, times, length_bases", [("chr1", "AAA", 3, 9), ("chr2", "TTT", 10, 30),],
 )
 def test_bases_length_from_ContigBuilder_add(
-    name: str,
-    bases: str,
-    times: int,
-    length_bases: int,
+    name: str, bases: str, times: int, length_bases: int,
 ) -> None:
     """Checks that the number of bases in each contig is correct"""
     builder = FastaBuilder()
@@ -60,17 +53,10 @@ def test_contig_dict_is_not_accessable() -> None:
 
 @pytest.mark.parametrize(
     "name, bases, times, expected",
-    [
-        ("chr3", "AAA a", 3, ("AAAA" * 3)),
-        ("chr2", "TT T gT", 10, ("TTTGT" * 10)),
-    ],
+    [("chr3", "AAA a", 3, ("AAAA" * 3)), ("chr2", "TT T gT", 10, ("TTTGT" * 10)),],
 )
 def test_bases_string_from_ContigBuilder_add(
-    name: str,
-    bases: str,
-    times: int,
-    expected: str,
-    tmp_path: Path,
+    name: str, bases: str, times: int, expected: str, tmp_path: Path,
 ) -> None:
     """
     Reads bases back from fasta and checks that extra spaces are removed and bases are uppercase
diff --git a/fgpyo/io/tests/test_io.py b/fgpyo/io/tests/test_io.py
index d4cf286d..aa785aa1 100644
--- a/fgpyo/io/tests/test_io.py
+++ b/fgpyo/io/tests/test_io.py
@@ -84,16 +84,9 @@ def test_assert_path_is_writeable_pass() -> None:
 
 
 @pytest.mark.parametrize(
-    "suffix, expected",
-    [
-        (".gz", io.TextIOWrapper),
-        (".fa", io.TextIOWrapper),
-    ],
+    "suffix, expected", [(".gz", io.TextIOWrapper), (".fa", io.TextIOWrapper),],
 )
-def test_reader(
-    suffix: str,
-    expected: Any,
-) -> None:
+def test_reader(suffix: str, expected: Any,) -> None:
     """Tests fgpyo.io.to_reader"""
     with NamedTemp(suffix=suffix, mode="r", delete=True) as read_file:
         with fio.to_reader(path=Path(read_file.name)) as reader:
@@ -101,16 +94,9 @@ def test_reader(
 
 
 @pytest.mark.parametrize(
-    "suffix, expected",
-    [
-        (".gz", io.TextIOWrapper),
-        (".fa", io.TextIOWrapper),
-    ],
+    "suffix, expected", [(".gz", io.TextIOWrapper), (".fa", io.TextIOWrapper),],
 )
-def test_writer(
-    suffix: str,
-    expected: Any,
-) -> None:
+def test_writer(suffix: str, expected: Any,) -> None:
     """Tests fgpyo.io.to_writer()"""
     with NamedTemp(suffix=suffix, mode="w", delete=True) as write_file:
         with fio.to_writer(path=Path(write_file.name)) as writer:
@@ -121,10 +107,7 @@ def test_writer(
     "suffix, list_to_write",
     [(".txt", ["Test with a flat file", 10]), (".gz", ["Test with a gzip file", 10])],
 )
-def test_read_and_write_lines(
-    suffix: str,
-    list_to_write: List[Any],
-) -> None:
+def test_read_and_write_lines(suffix: str, list_to_write: List[Any],) -> None:
     """Test fgpyo.fio.read_lines and write_lines"""
     with NamedTemp(suffix=suffix, mode="w", delete=True) as read_file:
         fio.write_lines(path=Path(read_file.name), lines_to_write=list_to_write)
diff --git a/fgpyo/sam/__init__.py b/fgpyo/sam/__init__.py
index bb9fa6a3..11b61344 100644
--- a/fgpyo/sam/__init__.py
+++ b/fgpyo/sam/__init__.py
@@ -863,11 +863,7 @@ def all_recs(self) -> Iterator[AlignedSegment]:
             for rec in recs:
                 yield rec
 
-    def write_to(
-        self,
-        writer: SamFile,
-        primary_only: bool = False,
-    ) -> None:
+    def write_to(self, writer: SamFile, primary_only: bool = False,) -> None:
         """Write the records associated with the template to file.
 
         Args:
@@ -883,11 +879,7 @@ def write_to(
         for rec in rec_iter:
             writer.write(rec)
 
-    def set_tag(
-        self,
-        tag: str,
-        value: Union[str, int, float, None],
-    ) -> None:
+    def set_tag(self, tag: str, value: Union[str, int, float, None],) -> None:
         """Add a tag to all records associated with the template.
 
         Setting a tag to `None` will remove the tag.
diff --git a/fgpyo/sam/tests/test_sam.py b/fgpyo/sam/tests/test_sam.py
index 29a013f7..94fc944a 100755
--- a/fgpyo/sam/tests/test_sam.py
+++ b/fgpyo/sam/tests/test_sam.py
@@ -154,9 +154,7 @@ def test_sam_file_open_writing(
 
 
 def test_sam_file_open_writing_header_keyword(
-    expected_records: List[pysam.AlignedSegment],
-    header_dict: AlignmentHeader,
-    tmp_path: Path,
+    expected_records: List[pysam.AlignedSegment], header_dict: AlignmentHeader, tmp_path: Path,
 ) -> None:
     # Use SamWriter
     # use header as a keyword argument
diff --git a/fgpyo/sam/tests/test_template_iterator.py b/fgpyo/sam/tests/test_template_iterator.py
index 79ab9283..397603d0 100644
--- a/fgpyo/sam/tests/test_template_iterator.py
+++ b/fgpyo/sam/tests/test_template_iterator.py
@@ -73,9 +73,7 @@ def test_to_templates() -> None:
     assert len(list(template2.all_recs())) == 2
 
 
-def test_write_template(
-    tmp_path: Path,
-) -> None:
+def test_write_template(tmp_path: Path,) -> None:
     builder = SamBuilder()
     template = Template.build(
         [
diff --git a/fgpyo/tests/test_read_structure.py b/fgpyo/tests/test_read_structure.py
index f317f60a..64b230f8 100644
--- a/fgpyo/tests/test_read_structure.py
+++ b/fgpyo/tests/test_read_structure.py
@@ -31,24 +31,9 @@ def _S(off: int, len: int) -> ReadSegment:
         ("1M", (_M(0, 1),)),
         ("1S", (_S(0, 1),)),
         ("101T", (_T(0, 101),)),
-        (
-            "5B101T",
-            (
-                _B(0, 5),
-                _T(5, 101),
-            ),
-        ),
+        ("5B101T", (_B(0, 5), _T(5, 101),),),
         ("123456789T", (_T(0, 123456789),)),
-        (
-            "10T10B10B10S10M",
-            (
-                _T(0, 10),
-                _B(10, 10),
-                _B(20, 10),
-                _S(30, 10),
-                _M(40, 10),
-            ),
-        ),
+        ("10T10B10B10S10M", (_T(0, 10), _B(10, 10), _B(20, 10), _S(30, 10), _M(40, 10),),),
     ],
 )
 def test_read_structure_from_string(string: str, segments: Tuple[ReadSegment, ...]) -> None:
@@ -58,24 +43,8 @@ def test_read_structure_from_string(string: str, segments: Tuple[ReadSegment, ..
 @pytest.mark.parametrize(
     "string,segments",
     [
-        (
-            "75T 8B 8B 75T",
-            (
-                _T(0, 75),
-                _B(75, 8),
-                _B(83, 8),
-                _T(91, 75),
-            ),
-        ),
-        (
-            " 75T  8B   8B     75T  ",
-            (
-                _T(0, 75),
-                _B(75, 8),
-                _B(83, 8),
-                _T(91, 75),
-            ),
-        ),
+        ("75T 8B 8B 75T", (_T(0, 75), _B(75, 8), _B(83, 8), _T(91, 75),),),
+        (" 75T  8B   8B     75T  ", (_T(0, 75), _B(75, 8), _B(83, 8), _T(91, 75),),),
     ],
 )
 def test_read_structure_from_string_with_whitespace(
@@ -98,8 +67,7 @@ def test_read_structure_variable_once_and_only_once_last_segment_ok(
 
 
 @pytest.mark.parametrize(
-    "string",
-    ["++M", "5M++T", "5M70+T", "+M+T", "+M70T"],
+    "string", ["++M", "5M++T", "5M70+T", "+M+T", "+M70T"],
 )
 def test_read_structure_variable_once_and_only_once_last_segment_exception(string: str) -> None:
     with pytest.raises(Exception):
diff --git a/fgpyo/util/inspect.py b/fgpyo/util/inspect.py
index 6c8fee56..313f10c4 100644
--- a/fgpyo/util/inspect.py
+++ b/fgpyo/util/inspect.py
@@ -68,9 +68,7 @@ def split_at_given_level(
 
 
 def _get_parser(
-    cls: Type,
-    type_: TypeAlias,
-    parsers: Optional[Dict[type, Callable[[str], Any]]] = None,
+    cls: Type, type_: TypeAlias, parsers: Optional[Dict[type, Callable[[str], Any]]] = None,
 ) -> partial:
     """Attempts to find a parser for a provided type.
 
@@ -114,11 +112,7 @@ def get_parser() -> partial:
                 assert (
                     len(subtypes) == 1
                 ), "Lists are allowed only one subtype per PEP specification!"
-                subtype_parser = _get_parser(
-                    cls,
-                    subtypes[0],
-                    parsers,
-                )
+                subtype_parser = _get_parser(cls, subtypes[0], parsers,)
                 return functools.partial(
                     lambda s: list(
                         []
@@ -134,11 +128,7 @@ def get_parser() -> partial:
                 assert (
                     len(subtypes) == 1
                 ), "Sets are allowed only one subtype per PEP specification!"
-                subtype_parser = _get_parser(
-                    cls,
-                    subtypes[0],
-                    parsers,
-                )
+                subtype_parser = _get_parser(cls, subtypes[0], parsers,)
                 return functools.partial(
                     lambda s: set(
                         set({})
@@ -151,12 +141,7 @@ def get_parser() -> partial:
                 )
             elif typing.get_origin(type_) == tuple:
                 subtype_parsers = [
-                    _get_parser(
-                        cls,
-                        subtype,
-                        parsers,
-                    )
-                    for subtype in typing.get_args(type_)
+                    _get_parser(cls, subtype, parsers,) for subtype in typing.get_args(type_)
                 ]
 
                 def tuple_parse(tuple_string: str) -> Tuple[Any, ...]:
@@ -185,16 +170,8 @@ def tuple_parse(tuple_string: str) -> Tuple[Any, ...]:
                     len(subtypes) == 2
                 ), "Dict object must have exactly 2 subtypes per PEP specification!"
                 (key_parser, val_parser) = (
-                    _get_parser(
-                        cls,
-                        subtypes[0],
-                        parsers,
-                    ),
-                    _get_parser(
-                        cls,
-                        subtypes[1],
-                        parsers,
-                    ),
+                    _get_parser(cls, subtypes[0], parsers,),
+                    _get_parser(cls, subtypes[1], parsers,),
                 )
 
                 def dict_parse(dict_string: str) -> Dict[Any, Any]:
@@ -254,9 +231,7 @@ def dict_parse(dict_string: str) -> Dict[Any, Any]:
 
 
 def attr_from(
-    cls: Type,
-    kwargs: Dict[str, str],
-    parsers: Optional[Dict[type, Callable[[str], Any]]] = None,
+    cls: Type, kwargs: Dict[str, str], parsers: Optional[Dict[type, Callable[[str], Any]]] = None,
 ) -> Any:
     """Builds an attr class from key-word arguments
 
diff --git a/fgpyo/util/logging.py b/fgpyo/util/logging.py
index 5c1210b5..d30c9dab 100644
--- a/fgpyo/util/logging.py
+++ b/fgpyo/util/logging.py
@@ -125,9 +125,7 @@ def __exit__(
         return False
 
     def record(
-        self,
-        reference_name: Optional[str] = None,
-        position: Optional[int] = None,
+        self, reference_name: Optional[str] = None, position: Optional[int] = None,
     ) -> bool:
         """Record an item at a given genomic coordinate.
         Args:
@@ -147,10 +145,7 @@ def record(
         else:
             return False
 
-    def record_alignment(
-        self,
-        rec: AlignedSegment,
-    ) -> bool:
+    def record_alignment(self, rec: AlignedSegment,) -> bool:
         """Correctly record pysam.AlignedSegments (zero-based coordinates).
 
         Args:
@@ -164,11 +159,7 @@ def record_alignment(
         else:
             return self.record(rec.reference_name, rec.reference_start + 1)
 
-    def _log(
-        self,
-        refname: Optional[str] = None,
-        position: Optional[int] = None,
-    ) -> None:
+    def _log(self, refname: Optional[str] = None, position: Optional[int] = None,) -> None:
         """Helper method to print the log message.
 
         Args:
@@ -187,9 +178,7 @@ def _log(
 
         self.printer(f"{self.verb} {self.count:,d} {self.noun}: {coordinate}")
 
-    def log_last(
-        self,
-    ) -> bool:
+    def log_last(self,) -> bool:
         """Force logging the last record, for example when progress has completed."""
         if self._count_mod_unit != 0:
             self._log(refname=self._last_reference_name, position=self._last_position)
diff --git a/fgpyo/util/tests/test_logging.py b/fgpyo/util/tests/test_logging.py
index 09f21235..358baa04 100644
--- a/fgpyo/util/tests/test_logging.py
+++ b/fgpyo/util/tests/test_logging.py
@@ -43,12 +43,7 @@ def test_progress_logger_as_context_manager() -> None:
 
 
 @pytest.mark.parametrize(
-    "record",
-    [
-        (r1_mapped_named),
-        (r2_unmapped_named),
-        (r2_unmapped_un_named),
-    ],
+    "record", [(r1_mapped_named), (r2_unmapped_named), (r2_unmapped_un_named),],
 )
 def test_record_alignment_mapped_record(record: pysam.AlignedSegment) -> None:
     # Define instance of ProgressLogger
diff --git a/fgpyo/util/tests/test_metric.py b/fgpyo/util/tests/test_metric.py
index d84ed4b1..8da5cc49 100644
--- a/fgpyo/util/tests/test_metric.py
+++ b/fgpyo/util/tests/test_metric.py
@@ -34,13 +34,7 @@ class DummyMetric(Metric["DummyMetric"]):
     dict_value: Dict[int, str] = attr.ib()
     tuple_value: Tuple[int, str] = attr.ib()
     list_value: List[str] = attr.ib()
-    complex_value: Dict[
-        int,
-        Dict[
-            Tuple[int, int],
-            Set[str],
-        ],
-    ] = attr.ib()
+    complex_value: Dict[int, Dict[Tuple[int, int], Set[str],],] = attr.ib()
 
 
 DUMMY_METRICS: List[DummyMetric] = [
@@ -53,9 +47,7 @@ class DummyMetric(Metric["DummyMetric"]):
         optional_int_value=-5,
         optional_bool_value=True,
         optional_enum_value=EnumTest.EnumVal3,
-        dict_value={
-            1: "test1",
-        },
+        dict_value={1: "test1",},
         tuple_value=(0, "test1"),
         list_value=[],
         complex_value={1: {(5, 1): set({"mapped_test_val1", "setval2"})}},
@@ -138,10 +130,7 @@ class PersonDefault(Metric["PersonDefault"]):
 
 
 @pytest.mark.parametrize("metric", DUMMY_METRICS)
-def test_metric_roundtrip(
-    tmp_path: Path,
-    metric: DummyMetric,
-) -> None:
+def test_metric_roundtrip(tmp_path: Path, metric: DummyMetric,) -> None:
     path: Path = tmp_path / "metrics.txt"
 
     DummyMetric.write(path, metric)
diff --git a/fgpyo/util/types.py b/fgpyo/util/types.py
index 9bcee785..fa630495 100644
--- a/fgpyo/util/types.py
+++ b/fgpyo/util/types.py
@@ -78,9 +78,7 @@ def _is_optional(type_: type) -> bool:
 
 
 def _make_union_parser_worker(
-    union: Type[UnionType],
-    parsers: Iterable[Callable[[str], UnionType]],
-    value: str,
+    union: Type[UnionType], parsers: Iterable[Callable[[str], UnionType]], value: str,
 ) -> UnionType:
     """Worker function behind union parsing. Iterates through possible parsers for the union and
     returns the value produced by the first parser that works. Otherwise raises an error if none
@@ -110,9 +108,7 @@ def make_union_parser(union: Type[UnionType], parsers: Iterable[Callable[[str],
 
 
 def _make_literal_parser_worker(
-    literal: Type[LiteralType],
-    parsers: Iterable[Callable[[str], LiteralType]],
-    value: str,
+    literal: Type[LiteralType], parsers: Iterable[Callable[[str], LiteralType]], value: str,
 ) -> LiteralType:
     """Worker function behind literal parsing. Iterates through possible literals and
     returns the value produced by the first literal that matches expectation.
diff --git a/fgpyo/vcf/builder.py b/fgpyo/vcf/builder.py
index a1307096..c2018838 100644
--- a/fgpyo/vcf/builder.py
+++ b/fgpyo/vcf/builder.py
@@ -363,11 +363,7 @@ def add_format_header(
         header_line += ">"
         self.add_header_line(header_line)
 
-    def add_filter_header(
-        self,
-        name: str,
-        description: Optional[str] = None,
-    ) -> None:
+    def add_filter_header(self, name: str, description: Optional[str] = None,) -> None:
         """
         Add a FILTER header field to the VCF header.
 
diff --git a/fgpyo/vcf/tests/test_builder.py b/fgpyo/vcf/tests/test_builder.py
index 2a16d797..7697e564 100644
--- a/fgpyo/vcf/tests/test_builder.py
+++ b/fgpyo/vcf/tests/test_builder.py
@@ -51,8 +51,7 @@ def _get_random_contig(
 
 
 def _get_random_variant_inputs(
-    random_generator: random.Random,
-    sequence_dict: Dict[str, Dict[str, Any]],
+    random_generator: random.Random, sequence_dict: Dict[str, Dict[str, Any]],
 ) -> Mapping[str, Any]:
     """
     Randomly generate inputs that should produce a valid Variant. Don't include format fields.
@@ -227,9 +226,7 @@ def _get_is_compressed(input_file: Path) -> bool:
 
 @pytest.mark.parametrize("compress", (True, False))
 def test_zero_sample_vcf_round_trip(
-    temp_path: Path,
-    zero_sample_record_inputs: Tuple[Mapping[str, Any], ...],
-    compress: bool,
+    temp_path: Path, zero_sample_record_inputs: Tuple[Mapping[str, Any], ...], compress: bool,
 ) -> None:
     """
     Test if zero-sample VCF (no genotypes) output records match the records read in from the
@@ -252,24 +249,13 @@ def test_zero_sample_vcf_round_trip(
 
 
 def _add_random_genotypes(
-    random_generator: random.Random,
-    record_input: Mapping[str, Any],
-    sample_ids: Iterable[str],
+    random_generator: random.Random, record_input: Mapping[str, Any], sample_ids: Iterable[str],
 ) -> Mapping[str, Any]:
     """Add random genotypes to the record input."""
     genotypes = {
         sample_id: {
             "GT": random_generator.choice(
-                [
-                    (None,),
-                    (0, 0),
-                    (0, 1),
-                    (1, 0),
-                    (1, 1),
-                    (None, 0),
-                    (0, None),
-                    (1, None),
-                ]
+                [(None,), (0, 0), (0, 1), (1, 0), (1, 1), (None, 0), (0, None), (1, None),]
             )
         }
         for sample_id in sample_ids
diff --git a/poetry.lock b/poetry.lock
index 720e205d..5b3a6853 100644
--- a/poetry.lock
+++ b/poetry.lock
@@ -11,6 +11,17 @@ files = [
     {file = "alabaster-0.7.13.tar.gz", hash = "sha256:a27a4a084d5e690e16e01e03ad2b2e552c61a65469419b907243193de1a84ae2"},
 ]
 
+[[package]]
+name = "appdirs"
+version = "1.4.4"
+description = "A small Python module for determining appropriate platform-specific dirs, e.g. a \"user data dir\"."
+optional = false
+python-versions = "*"
+files = [
+    {file = "appdirs-1.4.4-py2.py3-none-any.whl", hash = "sha256:a841dacd6b99318a741b166adb07e19ee71a274450e68237b4650ca1055ab128"},
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+]
+
 [[package]]
 name = "attrs"
 version = "23.2.0"
@@ -49,49 +60,26 @@ dev = ["freezegun (>=1.0,<2.0)", "pytest (>=6.0)", "pytest-cov"]
 
 [[package]]
 name = "black"
-version = "24.2.0"
+version = "19.10b0"
 description = "The uncompromising code formatter."
 optional = false
-python-versions = ">=3.8"
+python-versions = ">=3.6"
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 ]
 
 [package.dependencies]
-click = ">=8.0.0"
-mypy-extensions = ">=0.4.3"
-packaging = ">=22.0"
-pathspec = ">=0.9.0"
-platformdirs = ">=2"
-tomli = {version = ">=1.1.0", markers = "python_version < \"3.11\""}
-typing-extensions = {version = ">=4.0.1", markers = "python_version < \"3.11\""}
+appdirs = "*"
+attrs = ">=18.1.0"
+click = ">=6.5"
+pathspec = ">=0.6,<1"
+regex = "*"
+toml = ">=0.9.4"
+typed-ast = ">=1.4.0"
 
 [package.extras]
-colorama = ["colorama (>=0.4.3)"]
-d = ["aiohttp (>=3.7.4)", "aiohttp (>=3.7.4,!=3.9.0)"]
-jupyter = ["ipython (>=7.8.0)", "tokenize-rt (>=3.2.0)"]
-uvloop = ["uvloop (>=0.15.2)"]
+d = ["aiohttp (>=3.3.2)", "aiohttp-cors"]
 
 [[package]]
 name = "certifi"
@@ -205,13 +193,13 @@ files = [
 
 [[package]]
 name = "click"
-version = "8.1.7"
+version = "8.0.4"
 description = "Composable command line interface toolkit"
 optional = false
-python-versions = ">=3.7"
+python-versions = ">=3.6"
 files = [
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-    {file = "click-8.1.7.tar.gz", hash = "sha256:ca9853ad459e787e2192211578cc907e7594e294c7ccc834310722b41b9ca6de"},
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+    {file = "click-8.0.4.tar.gz", hash = "sha256:8458d7b1287c5fb128c90e23381cf99dcde74beaf6c7ff6384ce84d6fe090adb"},
 ]
 
 [package.dependencies]
@@ -576,21 +564,6 @@ files = [
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 ]
 
-[[package]]
-name = "platformdirs"
-version = "4.2.0"
-description = "A small Python package for determining appropriate platform-specific dirs, e.g. a \"user data dir\"."
-optional = false
-python-versions = ">=3.8"
-files = [
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-]
-
-[package.extras]
-docs = ["furo (>=2023.9.10)", "proselint (>=0.13)", "sphinx (>=7.2.6)", "sphinx-autodoc-typehints (>=1.25.2)"]
-test = ["appdirs (==1.4.4)", "covdefaults (>=2.3)", "pytest (>=7.4.3)", "pytest-cov (>=4.1)", "pytest-mock (>=3.12)"]
-
 [[package]]
 name = "pluggy"
 version = "1.4.0"
@@ -752,6 +725,108 @@ files = [
     {file = "pytz-2024.1.tar.gz", hash = "sha256:2a29735ea9c18baf14b448846bde5a48030ed267578472d8955cd0e7443a9812"},
 ]
 
+[[package]]
+name = "regex"
+version = "2023.12.25"
+description = "Alternative regular expression module, to replace re."
+optional = false
+python-versions = ">=3.7"
+files = [
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 version = "2.31.0"
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 lint = ["docutils-stubs", "flake8", "mypy"]
 test = ["pytest"]
 
+[[package]]
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+version = "0.10.2"
+description = "Python Library for Tom's Obvious, Minimal Language"
+optional = false
+python-versions = ">=2.6, !=3.0.*, !=3.1.*, !=3.2.*"
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+
 [[package]]
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 version = "2.0.1"
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+
 [[package]]
 name = "typing-extensions"
 version = "4.9.0"
@@ -1002,4 +1138,4 @@ docs = ["sphinx", "sphinx_rtd_theme"]
 [metadata]
 lock-version = "2.0"
 python-versions = ">=3.8.0,<4.0"
-content-hash = "975e6749bc8842594f0af28cc1bd1067c42d3e7f49c18d3f29a03cc438dbdcea"
+content-hash = "943145eda74584c2dc95239fc3cf4d6985d44faf7d726cd910736946e90a0edc"
diff --git a/pyproject.toml b/pyproject.toml
index 1b2a4bc8..dc305d24 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -35,7 +35,8 @@ typing_extensions = { version = ">=3.7.4", python = "<3.12" }
 docs = ["sphinx", "sphinx_rtd_theme"]
 
 [tool.poetry.dev-dependencies]
-black = ">=23.3.0"
+black = "19.10b0"
+click = "<8.1.0"
 flake8 = [
 	{ version = ">=5.0.0", python = "<3.12.0" },
 	{ version = ">=6.1.0", python = ">=3.12.0" },