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Update docs to describe bwa-aln-interactive #2

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nh13 opened this issue Aug 22, 2024 · 1 comment
Open

Update docs to describe bwa-aln-interactive #2

nh13 opened this issue Aug 22, 2024 · 1 comment
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good first issue Good for newcomers help wanted Extra attention is needed

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nh13 commented Aug 22, 2024 •
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  1. Motivation for it (to be able to send queries and receive alignments on standard input/output respectively, outputs SAM directly)
  2. How to use it (e.g. pipes)
  3. Where it's being used (e.g. prymer)
@nh13 nh13 added good first issue Good for newcomers help wanted Extra attention is needed labels Aug 22, 2024
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nh13 commented Aug 22, 2024

See motivation I posted on the PR for adding this as a bioconda recipe: bioconda/bioconda-recipes#50269

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