From d4368e7106b0c67150b9f73999b3bfd8159618f2 Mon Sep 17 00:00:00 2001 From: Jeremy Magland Date: Tue, 18 Feb 2025 19:57:31 -0500 Subject: [PATCH] apptainer instructions --- .../text-letter-count/TextLetterCountView.tsx | 21 +++++++++++++++---- 1 file changed, 17 insertions(+), 4 deletions(-) diff --git a/src/pages/common/DatasetWorkspace/plugins/text-letter-count/TextLetterCountView.tsx b/src/pages/common/DatasetWorkspace/plugins/text-letter-count/TextLetterCountView.tsx index 2c98b6b6..81c09504 100644 --- a/src/pages/common/DatasetWorkspace/plugins/text-letter-count/TextLetterCountView.tsx +++ b/src/pages/common/DatasetWorkspace/plugins/text-letter-count/TextLetterCountView.tsx @@ -42,7 +42,7 @@ const TextLetterCountView: FunctionComponent = ({ const [result, setResult] = useState(null); const [error, setError] = useState(null); - const input = useMemo(() => ({ fileUrl, version: 2 }), [fileUrl]); + const input = useMemo(() => ({ fileUrl, version: 3 }), [fileUrl]); // Check for existing job on component mount useEffect(() => { @@ -179,7 +179,7 @@ const TextLetterCountView: FunctionComponent = ({ }} >
-

To process this job using Docker:

+

To process this job using Docker or Apptainer:

= ({ marginBottom: "15px", }} > - docker run ghcr.io/flatironinstitute/neurosift-job-runner{" "} - {jobId} + docker run + ghcr.io/flatironinstitute/neurosift-job-runner:main-v2 {jobId} + + + apptainer exec + docker://ghcr.io/flatironinstitute/neurosift-job-runner:main-v2 + python3 run-job.py {jobId}

Or for local development: