DESCRIPTION

Package: drugsens
Title: Automated Analysis of 'QuPath' Output Data and Metadata Extraction
Description: A comprehensive toolkit for analyzing microscopy data output from 'QuPath' software. 
    Provides functionality for automated data processing, metadata extraction, and statistical 
    analysis of imaging results. The methodology implemented in this package is based on 
    Labrosse et al. (2024) <doi:10.1016/j.xpro.2024.103274> "Protocol for quantifying drug 
    sensitivity in 3D patient-derived ovarian cancer models", which describes the complete 
    workflow for drug sensitivity analysis in patient-derived cancer models.
Version: 0.1.0
BugReports: https://git.scicore.unibas.ch/ovca-research/drugsens/-/issues
SystemRequirements: QuPath™ 4.0.0 or higher
Authors@R: c(
    person("Flavio", "Lombardo", , "flavio.lombardo@unibas.ch", role = c("aut", "cre", "cph"), comment = c(ORCID = "0000-0002-4853-6838")),
    person("Ricardo Coelho", role = c("cph")),   
    person("Ovarian Cancer Research", role = c("cph")),   
    person("University of Basel and University Hospital Basel", role = c("cph"))   
    )
URL: https://git.scicore.unibas.ch/ovca-research/drugsens/
Maintainer: Flavio Lombardo <flavio.lombardo@unibas.ch>
License: MIT + file LICENSE
Imports:
    dplyr,
    ggplot2,
    ggpubr,
    knitr,
    roxygen2,
    stats,
    stringr,
    tidyr,
    tidyselect,
    utils,
    testthat (>= 3.0.0)
Depends: 
    R (>= 4.2)
Encoding: UTF-8
LazyData: true
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.2
Suggests: 
Config/testthat/edition: 3