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test_pr_and_main.yml
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name: GitHub CI
on:
push:
branches:
- main
pull_request:
branches:
- main
workflow_dispatch:
inputs:
git-ref:
description: Git Hash (Optional)
required: false
defaults:
run:
shell: bash -l {0}
env:
PYTHONWARNINGS: ignore::UserWarning
PYTHON_CORE_PKGS: wheel
PYPI_ONLY: z3-solver
CACHE_VER: v210812.0
NEOS_EMAIL: [email protected]
jobs:
build:
name: ${{ matrix.TARGET }}/${{ matrix.python }}${{ matrix.other }}
runs-on: ${{ matrix.os }}
timeout-minutes: 120
strategy:
fail-fast: false
matrix:
os: [ubuntu-latest, macos-latest, windows-latest]
python: [3.7, 3.8, 3.9, '3.10']
other: [""]
category: [""]
include:
- os: ubuntu-latest
TARGET: linux
PYENV: pip
- os: macos-latest
TARGET: osx
PYENV: pip
- os: windows-latest
TARGET: win
PYENV: conda
PACKAGES: glpk
- os: ubuntu-latest
python: 3.9
other: /conda
skip_doctest: 1
TARGET: linux
PYENV: conda
PACKAGES:
- os: ubuntu-latest
python: 3.8
other: /mpi
mpi: 3
skip_doctest: 1
TARGET: linux
PYENV: conda
PACKAGES: mpi4py openmpi
- os: ubuntu-latest
python: 3.7
other: /slim
slim: 1
skip_doctest: 1
TARGET: linux
PYENV: pip
- os: ubuntu-latest
python: 3.8
other: /cython
setup_options: --with-cython
skip_doctest: 1
TARGET: linux
PYENV: pip
PACKAGES: cython
- os: ubuntu-latest
python: 3.8
other: /singletest
category: neos
skip_doctest: 1
TARGET: linux
PYENV: pip
- os: ubuntu-latest
python: 3.8
other: /pyutilib
TARGET: linux
PYENV: pip
PACKAGES: pyutilib
- os: ubuntu-latest
python: pypy-3.9
skip_doctest: 1
TARGET: linux
PYENV: pip
- os: windows-latest
python: 3.8
other: /pip
skip_doctest: 1
TARGET: win
PYENV: pip
steps:
- name: Checkout Pyomo source
uses: actions/checkout@v3
- name: Configure job parameters
run: |
JOB="${{matrix.TARGET}}/${{matrix.python}}${{matrix.other}}"
echo "GHA_JOBNAME=$JOB" | sed 's|/|_|g' >> $GITHUB_ENV
if test -z "${{matrix.other}}"; then
echo "GHA_JOBGROUP=${{matrix.TARGET}}" >> $GITHUB_ENV
else
echo "GHA_JOBGROUP=other" >> $GITHUB_ENV
fi
# Note: pandas 1.0.3 causes gams 29.1.0 import to fail in python 3.8
EXTRAS=tests
if test -z "${{matrix.slim}}"; then
EXTRAS="$EXTRAS,docs,optional"
fi
echo "EXTRAS=$EXTRAS" >> $GITHUB_ENV
PYTHON_PACKAGES="${{matrix.PACKAGES}}"
echo "PYTHON_PACKAGES=$PYTHON_PACKAGES" \
| tr '\n' ' ' | sed 's/ \+/ /g' >> $GITHUB_ENV
# Ideally we would cache the conda downloads; however, each cache is
# over 850MB, and with 5 python versions, that would consume 4.2 of
# the 5 GB GitHub allows.
#
#- name: Conda package cache
# uses: actions/cache@v2
# if: matrix.PYENV == 'conda'
# id: conda-cache
# with:
# path: cache/conda
# key: conda-${{env.CACHE_VER}}.0-${{runner.os}}-${{matrix.python}}
- name: Pip package cache
uses: actions/cache@v2
if: matrix.PYENV == 'pip'
id: pip-cache
with:
path: cache/pip
key: pip-${{env.CACHE_VER}}.0-${{runner.os}}-${{matrix.python}}
- name: OS package cache
uses: actions/cache@v2
if: matrix.TARGET != 'osx'
id: os-cache
with:
path: cache/os
key: pkg-${{env.CACHE_VER}}.0-${{runner.os}}
- name: TPL package download cache
uses: actions/cache@v2
id: download-cache
with:
path: cache/download
key: download-${{env.CACHE_VER}}.0-${{runner.os}}
- name: Configure curl
run: |
CURLRC="$(cat <<EOF
retry = 0
max-time = 30
EOF
)"
echo "$CURLRC" > ${GITHUB_WORKSPACE}/.curlrc
echo "$CURLRC" > ${GITHUB_WORKSPACE}/_curlrc
echo "CURL_HOME=$GITHUB_WORKSPACE" >> $GITHUB_ENV
- name: Update OSX
if: matrix.TARGET == 'osx'
run: |
mkdir -p ${GITHUB_WORKSPACE}/cache/os
export HOMEBREW_CACHE=${GITHUB_WORKSPACE}/cache/os
# Be cautious running brew update: it can break
# setup-python on OSX
# brew update
#
# Notes:
# - install glpk
# - pyodbc needs: gcc pkg-config unixodbc freetds
for pkg in bash pkg-config unixodbc freetds glpk; do
brew list $pkg || brew install $pkg
done
- name: Update Linux
if: matrix.TARGET == 'linux'
run: |
mkdir -p ${GITHUB_WORKSPACE}/cache/os
# Notes:
# - install glpk
# - ipopt needs: libopenblas-dev gfortran liblapack-dev
sudo apt-get -o Dir::Cache=${GITHUB_WORKSPACE}/cache/os \
install libopenblas-dev gfortran liblapack-dev glpk-utils
sudo chmod -R 777 ${GITHUB_WORKSPACE}/cache/os
- name: Update Windows
if: matrix.TARGET == 'win'
run: |
echo "SETUPTOOLS_USE_DISTUTILS=local" >> $GITHUB_ENV
- name: Set up Python ${{ matrix.python }}
if: matrix.PYENV == 'pip'
uses: actions/setup-python@v3
with:
python-version: ${{ matrix.python }}
- name: Set up Miniconda Python ${{ matrix.python }}
if: matrix.PYENV == 'conda'
uses: conda-incubator/setup-miniconda@v2
with:
auto-update-conda: true
python-version: ${{ matrix.python }}
channels: conda-forge
channel-priority: strict
# GitHub actions is very fragile when it comes to setting up various
# Python interpreters, expecially the setup-miniconda interface.
# Per the setup-miniconda documentation, it is important to always
# invoke bash as a login shell ('shell: bash -l {0}') so that the
# conda environment is properly activated. However, running within
# a login shell appears to foul up the link to python from
# setup-python. Further, we have anecdotal evidence that
# subprocesses invoked through $(python -c ...) and `python -c ...`
# will not pick up the python activated by setup-python on OSX.
#
# Our solution is to define a PYTHON_EXE environment variable that
# can be explicitly called within subprocess calls to reach the
# correct interpreter. Note that we must explicitly run in a *non*
# login shell to set up the environment variable for the
# setup-python environments.
- name: Install Python Packages (pip)
if: matrix.PYENV == 'pip'
shell: bash # DO NOT REMOVE: see note above
run: |
python -c 'import sys;print(sys.executable)'
python -m pip install --cache-dir cache/pip --upgrade pip
PYOMO_DEPENDENCIES=`python setup.py dependencies \
--extras "$EXTRAS" | tail -1`
python -m pip install --cache-dir cache/pip \
${PYTHON_CORE_PKGS} ${PYTHON_PACKAGES} ${PYOMO_DEPENDENCIES}
python -m pip install --cache-dir cache/pip pymysql || \
python -m pip install --cache-dir cache/pip pymysql
if test -z "${{matrix.slim}}"; then
python -m pip install --cache-dir cache/pip cplex \
|| echo "WARNING: CPLEX Community Edition is not available"
python -m pip install --cache-dir cache/pip \
-i https://pypi.gurobi.com gurobipy \
|| echo "WARNING: Gurobi is not available"
python -m pip install --cache-dir cache/pip xpress \
|| echo "WARNING: Xpress Community Edition is not available"
fi
python -c 'import sys; print("PYTHON_EXE=%s" \
% (sys.executable,))' >> $GITHUB_ENV
echo ""
echo "Final pip environment:"
python -m pip list | sed 's/^/ /'
- name: Install Python packages (conda)
if: matrix.PYENV == 'conda'
run: |
mkdir -p $GITHUB_WORKSPACE/cache/conda
conda config --set always_yes yes
conda config --set auto_update_conda false
conda config --prepend pkgs_dirs $GITHUB_WORKSPACE/cache/conda
conda info
conda config --show-sources
conda config --show channels
conda list --show-channel-urls
which python
python --version
# Note: some pypi packages are not available through conda
PYOMO_DEPENDENCIES=`python setup.py dependencies \
--extras "$EXTRAS" | tail -1`
# HACK: Remove problem packages on conda+Linux
if test "${{matrix.TARGET}}" == linux; then
WORDSTOREMOVE="casadi numdifftools pint"
for WORD in $WORDSTOREMOVE; do
PYOMO_DEPENDENCIES=${PYOMO_DEPENDENCIES//$WORD/}
done
fi
CONDA_DEPENDENCIES=`echo $PYOMO_DEPENDENCIES | tr ' ' '\n' \
| grep -Ev ${PYPI_ONLY} | tr '\n' ' '`
PYPI_DEPENDENCIES=`echo $PYOMO_DEPENDENCIES | tr ' ' '\n' \
| grep -E ${PYPI_ONLY} | tr '\n' ' '`
conda install -q -y -c conda-forge \
${PYTHON_CORE_PKGS} ${PYTHON_PACKAGES} ${CONDA_DEPENDENCIES}
if test -z "${{matrix.slim}}"; then
conda install -q -y -c ibmdecisionoptimization 'cplex>=12.10' \
|| echo "WARNING: CPLEX Community Edition is not available"
conda install -q -y -c gurobi gurobi \
|| echo "WARNING: Gurobi is not available"
conda install -q -y -c fico-xpress xpress \
|| echo "WARNING: Xpress Community Edition is not available"
for PKG in cyipopt pymumps; do
conda install -q -y -c conda-forge $PKG \
|| echo "WARNING: $PKG is not available"
done
# TODO: This is a hack to stop test_qt.py from running until we
# can better troubleshoot why it fails on GHA
for QTPACKAGE in qt pyqt; do
conda remove $QTPACKAGE || echo "$QTPACKAGE not in this environment"
done
fi
# Re-try Pyomo (optional) dependencies with pip
if test -n "$PYPI_DEPENDENCIES"; then
python -m pip install --cache-dir cache/pip $PYPI_DEPENDENCIES
fi
# remember this python interpreter
python -c 'import sys; print("PYTHON_EXE=%s" \
% (sys.executable,))' >> $GITHUB_ENV
#
# conda activate puts itself first in the PATH, which overrides
# any paths we add through GITHUB_PATH. We will update .profile
# to move the local runner paths back to the front (before conda).
for profile in $HOME/.profile $HOME/.bash_profile; do
if test ! -e $profile; then
continue
fi
echo '' >> $profile
echo 'export PATH=`echo "$PATH" \
| tr ":" "\\n" | grep runner | tr "\n" ":"`:`echo "$PATH" \
| tr ":" "\\n" | grep -v runner | tr "\n" ":"`' >> $profile
done
echo ""
echo "Final conda environment:"
conda list | sed 's/^/ /'
- name: Setup TPL package directories
run: |
TPL_DIR="${GITHUB_WORKSPACE}/cache/tpl"
mkdir -p "$TPL_DIR"
DOWNLOAD_DIR="${GITHUB_WORKSPACE}/cache/download"
mkdir -p "$DOWNLOAD_DIR"
echo "TPL_DIR=$TPL_DIR" >> $GITHUB_ENV
echo "DOWNLOAD_DIR=$DOWNLOAD_DIR" >> $GITHUB_ENV
- name: Install Ipopt
if: ${{ ! matrix.slim }}
run: |
IPOPT_DIR=$TPL_DIR/ipopt
echo "$IPOPT_DIR" >> $GITHUB_PATH
echo "LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$IPOPT_DIR" >> $GITHUB_ENV
mkdir -p $IPOPT_DIR
IPOPT_TAR=${DOWNLOAD_DIR}/ipopt.tar.gz
if test ! -e $IPOPT_TAR; then
echo "...downloading Ipopt"
if test "${{matrix.TARGET}}" == osx; then
echo "IDAES Ipopt not available on OSX"
exit 0
fi
URL=https://github.com/IDAES/idaes-ext
RELEASE=$(curl --max-time 150 --retry 8 \
-L -s -H 'Accept: application/json' ${URL}/releases/latest)
VER=$(echo $RELEASE | sed -e 's/.*"tag_name":"\([^"]*\)".*/\1/')
URL=${URL}/releases/download/$VER
if test "${{matrix.TARGET}}" == linux; then
curl --max-time 150 --retry 8 \
-L $URL/idaes-solvers-ubuntu2004-x86_64.tar.gz \
> $IPOPT_TAR
else
curl --max-time 150 --retry 8 \
-L $URL/idaes-solvers-windows-x86_64.tar.gz \
$URL/idaes-lib-windows-x86_64.tar.gz > $IPOPT_TAR
fi
fi
cd $IPOPT_DIR
tar -xzi < $IPOPT_TAR
echo ""
echo "$IPOPT_DIR"
ls -l $IPOPT_DIR
- name: Install GAMS
if: ${{ ! matrix.slim }}
# We install using Powershell because the GAMS installer hangs
# when launched from bash on Windows
shell: pwsh
run: |
$GAMS_DIR = "${env:TPL_DIR}/gams"
echo "$GAMS_DIR" | `
Out-File -FilePath $env:GITHUB_PATH -Encoding utf8 -Append
echo "LD_LIBRARY_PATH=${env:LD_LIBRARY_PATH}:$GAMS_DIR" `
Out-File -FilePath $env:GITHUB_ENV -Encoding utf8 -Append
echo "DYLD_LIBRARY_PATH=${env:DYLD_LIBRARY_PATH}:$GAMS_DIR" `
Out-File -FilePath $env:GITHUB_ENV -Encoding utf8 -Append
$INSTALLER = "${env:DOWNLOAD_DIR}/gams_install.exe"
$URL = "https://d37drm4t2jghv5.cloudfront.net/distributions/29.1.0"
if ( "${{matrix.TARGET}}" -eq "win" ) {
$URL = "$URL/windows/windows_x64_64.exe"
} elseif ( "${{matrix.TARGET}}" -eq "osx" ) {
$URL = "$URL/macosx/osx_x64_64_sfx.exe"
} else {
$URL = "$URL/linux/linux_x64_64_sfx.exe"
}
if (-not (Test-Path "$INSTALLER" -PathType Leaf)) {
echo "...downloading GAMS"
Invoke-WebRequest -Uri "$URL" -OutFile "$INSTALLER" `
-RetryIntervalSec 30 -MaximumRetryCount 8 -TimeoutSec 150
}
echo "...installing GAMS"
if ( "${{matrix.TARGET}}" -eq "win" ) {
Start-Process -FilePath "$INSTALLER" -ArgumentList `
"/SP- /NORESTART /VERYSILENT /DIR=$GAMS_DIR /NOICONS" `
-Wait
} else {
chmod 777 $INSTALLER
Start-Process -FilePath "$INSTALLER" -ArgumentList `
"-q -d $GAMS_DIR" -Wait
mv $GAMS_DIR/*/* $GAMS_DIR/.
}
echo ""
echo "$GAMS_DIR"
ls -l $GAMS_DIR
- name: Install GAMS Python bindings
if: ${{ ! matrix.slim }}
run: |
GAMS_DIR="${env:TPL_DIR}/gams"
py_ver=$($PYTHON_EXE -c 'import sys;v="_%s%s" % sys.version_info[:2] \
;print(v if v != "_27" else "")')
if test -e $GAMS_DIR/apifiles/Python/api$py_ver; then
echo "Installing GAMS Python bindings"
pushd $GAMS_DIR/apifiles/Python/api$py_ver
$PYTHON_EXE setup.py install
popd
fi
- name: Install BARON
if: ${{ ! matrix.slim }}
shell: pwsh
run: |
$BARON_DIR = "${env:TPL_DIR}/baron"
echo "$BARON_DIR" | `
Out-File -FilePath $env:GITHUB_PATH -Encoding utf8 -Append
$URL = "https://www.minlp.com/downloads/xecs/baron/current/"
if ( "${{matrix.TARGET}}" -eq "win" ) {
$INSTALLER = "${env:DOWNLOAD_DIR}/baron_install.exe"
$URL += "baron-win64.exe"
} elseif ( "${{matrix.TARGET}}" -eq "osx" ) {
$INSTALLER = "${env:DOWNLOAD_DIR}/baron_install.zip"
$URL += "baron-osx64.zip"
} else {
$INSTALLER = "${env:DOWNLOAD_DIR}/baron_install.zip"
$URL += "baron-lin64.zip"
}
if (-not (Test-Path "$INSTALLER" -PathType Leaf)) {
echo "...downloading BARON ($URL)"
Invoke-WebRequest -Uri "$URL" -OutFile "$INSTALLER" `
-RetryIntervalSec 30 -MaximumRetryCount 8 -TimeoutSec 150
}
echo "...installing BARON"
if ( "${{matrix.TARGET}}" -eq "win" ) {
Start-Process -FilePath "$INSTALLER" -ArgumentList `
"/SP- /NORESTART /VERYSILENT /DIR=$BARON_DIR /NOICONS" `
-Wait
} else {
unzip -q $INSTALLER
mv baron-* $BARON_DIR
}
echo ""
echo "$BARON_DIR"
ls -l $BARON_DIR
- name: Install GJH_ASL_JSON
if: ${{ ! matrix.slim && matrix.TARGET != 'win' }}
run: |
GJH_DIR="$TPL_DIR/gjh"
echo "${GJH_DIR}" >> $GITHUB_PATH
INSTALL_DIR="${DOWNLOAD_DIR}/gjh"
if test ! -e "$INSTALL_DIR/bin"; then
mkdir -p "$INSTALL_DIR"
INSTALLER="$INSTALL_DIR/gjh_asl_json.zip"
URL="https://codeload.github.com/ghackebeil/gjh_asl_json/zip/master"
curl --max-time 150 --retry 8 -L $URL > $INSTALLER
cd $INSTALL_DIR
unzip -q $INSTALLER
cd gjh_asl_json-master/Thirdparty
./get.ASL
cd ..
make
mv bin "$INSTALL_DIR/bin"
fi
cp -rp "$INSTALL_DIR/bin" "$GJH_DIR"
echo ""
echo "$GJH_DIR"
ls -l $GJH_DIR
- name: Install Pyomo
run: |
echo ""
echo "Clone Pyomo-model-libraries..."
git clone -b main https://github.com/Pyomo/pyomo-model-libraries.git
echo ""
echo "Install Pyomo..."
echo ""
$PYTHON_EXE setup.py develop ${{matrix.setup_options}}
echo ""
echo "Set custom PYOMO_CONFIG_DIR"
echo ""
echo "PYOMO_CONFIG_DIR=${GITHUB_WORKSPACE}/config" >> $GITHUB_ENV
- name: Set up coverage tracking
run: |
if test "${{matrix.TARGET}}" == win; then
COVERAGE_BASE=${GITHUB_WORKSPACE}\\.cover
else
COVERAGE_BASE=${GITHUB_WORKSPACE}/.cover
fi
COVERAGE_RC=${COVERAGE_BASE}_rc
echo "COVERAGE_RCFILE=$COVERAGE_RC" >> $GITHUB_ENV
echo "COVERAGE_PROCESS_START=$COVERAGE_RC" >> $GITHUB_ENV
cp ${GITHUB_WORKSPACE}/.coveragerc ${COVERAGE_RC}
echo "data_file=${COVERAGE_BASE}age" >> ${COVERAGE_RC}
SITE_PACKAGES=$($PYTHON_EXE -c "from distutils.sysconfig import \
get_python_lib; print(get_python_lib())")
echo "Python site-packages: $SITE_PACKAGES"
echo 'import coverage; coverage.process_startup()' \
> ${SITE_PACKAGES}/run_coverage_at_startup.pth
- name: Download and install extensions
if: ${{ ! matrix.slim }}
run: |
echo ""
echo "Pyomo download-extensions"
echo ""
pyomo download-extensions
echo ""
echo "Pyomo build-extensions"
echo ""
pyomo build-extensions --parallel 2
- name: Report pyomo plugin information
run: |
echo "$PATH"
pyomo help --solvers || exit 1
pyomo help --transformations || exit 1
pyomo help --writers || exit 1
- name: Run Pyomo tests
if: matrix.mpi == 0
run: |
CATEGORY=
for cat in ${{matrix.category}}; do
CATEGORY+=" -m $cat"
done
$PYTHON_EXE -m pytest -v \
-W ignore::Warning $CATEGORY \
pyomo `pwd`/pyomo-model-libraries \
`pwd`/examples/pyomobook --junitxml="TEST-pyomo.xml"
- name: Run Pyomo MPI tests
if: matrix.mpi != 0
run: |
# Manually invoke the DAT parser so that parse_table_datacmds.py
# is fully generated by a single process before invoking MPI
$PYTHON_EXE -c "from pyomo.dataportal.parse_datacmds import \
parse_data_commands; parse_data_commands(data='')"
mpirun -np ${{matrix.mpi}} --oversubscribe pytest -v \
--junit-xml=TEST-pyomo-mpi.xml \
-m "mpi" -W ignore::Warning \
pyomo `pwd`/pyomo-model-libraries
- name: Run documentation tests
if: matrix.skip_doctest == 0
run: |
make -C doc/OnlineDocs doctest -d
- name: Process code coverage report
run: |
coverage combine
coverage report -i
coverage xml -i
- name: Record build artifacts
uses: actions/upload-artifact@v2
with:
name: ${{github.job}}_${{env.GHA_JOBGROUP}}-${{env.GHA_JOBNAME}}
path: |
.coverage
coverage.xml
# In general, do not record test results as artifacts to
# manage total artifact storage
# TEST-*.xml
bare-python-env:
name: linux/3.8/bare-env
runs-on: ubuntu-latest
timeout-minutes: 10
steps:
- name: Checkout Pyomo source
uses: actions/checkout@v3
- name: Set up Python 3.8
uses: actions/setup-python@v3
with:
python-version: 3.8
- name: Install Pyomo
run: |
echo ""
echo "Install Pyomo..."
echo ""
python setup.py develop
echo ""
echo "Set custom PYOMO_CONFIG_DIR"
echo ""
echo "PYOMO_CONFIG_DIR=${GITHUB_WORKSPACE}/config" >> $GITHUB_ENV
- name: Report pyomo plugin information
run: |
echo "$PATH"
pyomo help --solvers || exit 1
pyomo help --transformations || exit 1
pyomo help --writers || exit 1
- name: Run Pyomo standalone test
run: |
echo ""
echo "Running standalone Pyomo test"
echo ""
python `pwd`/pyomo/environ/tests/standalone_minimal_pyomo_driver.py \
|| exit 1
cover:
name: process-coverage-${{ matrix.TARGET }}
needs: build
if: always() # run even if a build job fails
runs-on: ${{ matrix.os }}
timeout-minutes: 10
strategy:
fail-fast: false
matrix:
os: [ubuntu-latest, macos-latest, windows-latest]
include:
- os: ubuntu-latest
TARGET: linux
- os: macos-latest
TARGET: osx
- os: windows-latest
TARGET: win
steps:
- name: Checkout Pyomo source
uses: actions/checkout@v3
# We need the source for .codecov.yml and running "coverage xml"
- name: Pip package cache
uses: actions/cache@v2
id: pip-cache
with:
path: cache/pip
key: pip-${{env.CACHE_VER}}.0-${{runner.os}}-3.8
- name: Download build artifacts
uses: actions/[email protected]
with:
path: artifacts
- name: Set up Python 3.8
uses: actions/setup-python@v3
with:
python-version: 3.8
- name: Install Python Packages (pip)
shell: bash # DO NOT REMOVE: see note above
run: |
python -c 'import sys;print(sys.executable)'
python -m pip install --cache-dir cache/pip --upgrade pip
PYOMO_DEPENDENCIES=`python setup.py dependencies \
--extras "tests" | tail -1`
python -m pip install --cache-dir cache/pip \
${PYTHON_CORE_PKGS} ${PYOMO_DEPENDENCIES}
python -c 'import sys; print("PYTHON_EXE=%s" \
% (sys.executable,))' >> $GITHUB_ENV
- name: Install Pyomo
run: |
echo ""
echo "Clone Pyomo-model-libraries..."
git clone https://github.com/Pyomo/pyomo-model-libraries.git
echo ""
echo "Install Pyomo..."
echo ""
$PYTHON_EXE setup.py develop ${{matrix.setup_options}}
echo ""
echo "Set custom PYOMO_CONFIG_DIR"
echo ""
echo "PYOMO_CONFIG_DIR=${GITHUB_WORKSPACE}/config" >> $GITHUB_ENV
- name: Generate parse_table_datacmds
run: |
# Manually invoke the DAT parser so that parse_table_datacmds.py
# is generated before running "coverage xml"
$PYTHON_EXE -c "from pyomo.dataportal.parse_datacmds import \
parse_data_commands; parse_data_commands(data='')"
- name: Update codecov uploader
run: |
set +e
CODECOV="${GITHUB_WORKSPACE}/codecov.sh"
echo "CODECOV=$CODECOV" >> $GITHUB_ENV
for i in `seq 3`; do
echo "Downloading current codecov script (attempt ${i})"
curl -L https://codecov.io/bash -o $CODECOV
if test $? == 0; then
break
fi
DELAY=$(( RANDOM % 30 + 30))
echo "Pausing $DELAY seconds before re-attempting download"
sleep $DELAY
done
if test ! -e $CODECOV; then
echo "Failed to download codecov.sh"
exit 1
fi
- name: Combine coverage reports
if: github.repository_owner == 'Pyomo' || github.ref != 'refs/heads/main'
run: |
set +e
if [ "$GITHUB_EVENT_NAME" == "pull_request" ]; then
SHA=$(jq --raw-output .pull_request.head.sha "$GITHUB_EVENT_PATH")
else
SHA=$GITHUB_SHA
fi
for ARTIFACT in artifacts/*_*${{matrix.TARGET}}_*; do
NAME=`echo $ARTIFACT | cut -d/ -f2`
cp -v $ARTIFACT/.coverage .coverage-$NAME
done
rm -vf .coverage coverage.xml
echo "Build: ${{ matrix.TARGET }}/other"
echo ""
FILES=.coverage-*_other-*
coverage combine --debug=dataio $FILES
if test ! -e .coverage; then
echo "No coverage to upload."
else
coverage xml || coverage xml -i
mv -v coverage.xml coverage-other.xml
fi
echo ""
echo "Build: ${{ matrix.TARGET }}"
echo ""
FILES=.coverage-*_${{matrix.TARGET}}-*
coverage combine --debug=dataio $FILES
rm -vf artifacts/*/*.xml
if test ! -e .coverage; then
echo "No coverage to upload."
else
coverage xml || coverage xml -i
fi
- name: Upload codecov reports
if: github.repository_owner == 'Pyomo' || github.ref != 'refs/heads/main'
uses: codecov/codecov-action@v2
with:
files: coverage.xml
name: ${{ matrix.TARGET }}
flags: ${{ matrix.TARGET }}
fail_ci_if_error: true
- name: Upload other coverage reports
if: |
hashFiles('coverage-other.xml') != '' &&
(github.repository_owner == 'Pyomo' || github.ref != 'refs/heads/main')
uses: codecov/codecov-action@v2
with:
files: coverage-other.xml
name: ${{ matrix.TARGET }}/other
flags: ${{ matrix.TARGET }},other
fail_ci_if_error: true