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ERROR: Failed building wheel for numpy
Failed to build numpy
ERROR: Could not build wheels for numpy, which is required to install pyproject.toml-based projects
× Building wheel for numpy (pyproject.toml) did not run successfully.
│ exit code: 1
╰─> [1212 lines of output]
setup.py:63: RuntimeWarning: NumPy 1.21.1 may not yet support Python 3.11.
warnings.warn(
Running from numpy source directory.
Processing numpy/random/_bounded_integers.pxd.in
Processing numpy/random/_philox.pyx
Processing numpy/random/_bounded_integers.pyx.in
Processing numpy/random/_sfc64.pyx
Processing numpy/random/_mt19937.pyx
Processing numpy/random/bit_generator.pyx
Processing numpy/random/mtrand.pyx
Processing numpy/random/_generator.pyx
Processing numpy/random/_pcg64.pyx
Processing numpy/random/_common.pyx
Cythonizing sources
blas_opt_info:
blas_mkl_info:
customize UnixCCompiler
libraries mkl_rt not found in ['/Users/josephkarpinski/anaconda3/envs/env3114Exoplanet/lib', '/usr/local/lib', '/usr/lib']
NOT AVAILABLE
note: This error originates from a subprocess, and is likely not a problem with pip.
ERROR: Failed building wheel for numpy
Failed to build numpy
ERROR: Could not build wheels for numpy, which is required to install pyproject.toml-based projects
The text was updated successfully, but these errors were encountered:
There's not much we can do about this one since theano (a dependency of PyMC3) requires an ancient version of numpy which doesn't have wheels for python 3.11. The only advice I have is to use an older version of python that does have numpy wheels available!
pip install -U exoplanet
ERROR: Failed building wheel for numpy
Failed to build numpy
ERROR: Could not build wheels for numpy, which is required to install pyproject.toml-based projects
Full install:
conda create --name env3114Exoplanet python=3.11.4
Collecting package metadata (current_repodata.json): done
Solving environment: done
Package Plan
environment location: /Users/josephkarpinski/anaconda3/envs/env3114Exoplanet
added / updated specs:
- python=3.11.4
The following NEW packages will be INSTALLED:
bzip2 pkgs/main/osx-64::bzip2-1.0.8-h1de35cc_0
ca-certificates pkgs/main/osx-64::ca-certificates-2023.05.30-hecd8cb5_0
libffi pkgs/main/osx-64::libffi-3.4.4-hecd8cb5_0
ncurses pkgs/main/osx-64::ncurses-6.4-hcec6c5f_0
openssl pkgs/main/osx-64::openssl-3.0.10-hca72f7f_0
pip pkgs/main/osx-64::pip-23.2.1-py311hecd8cb5_0
python pkgs/main/osx-64::python-3.11.4-hf27a42d_0
readline pkgs/main/osx-64::readline-8.2-hca72f7f_0
setuptools pkgs/main/osx-64::setuptools-68.0.0-py311hecd8cb5_0
sqlite pkgs/main/osx-64::sqlite-3.41.2-h6c40b1e_0
tk pkgs/main/osx-64::tk-8.6.12-h5d9f67b_0
tzdata pkgs/main/noarch::tzdata-2023c-h04d1e81_0
wheel pkgs/main/osx-64::wheel-0.38.4-py311hecd8cb5_0
xz pkgs/main/osx-64::xz-5.4.2-h6c40b1e_0
zlib pkgs/main/osx-64::zlib-1.2.13-h4dc903c_0
Proceed ([y]/n)? y
Downloading and Extracting Packages
Preparing transaction: done
Verifying transaction: done
Executing transaction: done
conda activate env3114Exoplanet
(env3114Exoplanet) josephkarpinski@Josephs-iMac ~ % pip install -U exoplanet
Collecting exoplanet
Using cached exoplanet-0.5.3-py3-none-any.whl (41 kB)
Collecting exoplanet-core<0.2,>=0.1 (from exoplanet)
Using cached exoplanet_core-0.1.2-cp311-cp311-macosx_10_14_x86_64.whl
Collecting pymc3>=3.9 (from exoplanet)
Using cached pymc3-3.11.5-py3-none-any.whl (872 kB)
Collecting aesara-theano-fallback>=0.0.2 (from exoplanet)
Using cached aesara_theano_fallback-0.1.0-py3-none-any.whl (5.4 kB)
Collecting astropy>=3.1 (from exoplanet)
Obtaining dependency information for astropy>=3.1 from https://files.pythonhosted.org/packages/14/f4/337aacc8138cf66f434ca26a06f3bc9c692b924aae5fe7117a12713028b2/astropy-5.3.2-cp311-cp311-macosx_10_9_x86_64.whl.metadata
Using cached astropy-5.3.2-cp311-cp311-macosx_10_9_x86_64.whl.metadata (9.4 kB)
Collecting numpy<1.22 (from exoplanet)
Using cached numpy-1.21.1.zip (10.3 MB)
Installing build dependencies ... done
Getting requirements to build wheel ... done
Preparing metadata (pyproject.toml) ... done
Collecting pyerfa>=2.0 (from astropy>=3.1->exoplanet)
Using cached pyerfa-2.0.0.3-cp311-cp311-macosx_10_9_x86_64.whl (342 kB)
Collecting PyYAML>=3.13 (from astropy>=3.1->exoplanet)
Obtaining dependency information for PyYAML>=3.13 from https://files.pythonhosted.org/packages/ec/0d/26fb23e8863e0aeaac0c64e03fd27367ad2ae3f3cccf3798ee98ce160368/PyYAML-6.0.1-cp311-cp311-macosx_10_9_x86_64.whl.metadata
Using cached PyYAML-6.0.1-cp311-cp311-macosx_10_9_x86_64.whl.metadata (2.1 kB)
Collecting packaging>=19.0 (from astropy>=3.1->exoplanet)
Using cached packaging-23.1-py3-none-any.whl (48 kB)
Collecting arviz>=0.11.0 (from pymc3>=3.9->exoplanet)
Obtaining dependency information for arviz>=0.11.0 from https://files.pythonhosted.org/packages/8c/43/b5be65de19e4ca0cfeb522addc3ac4abdafa9d29f3512dec05b8a672c615/arviz-0.16.1-py3-none-any.whl.metadata
Using cached arviz-0.16.1-py3-none-any.whl.metadata (8.7 kB)
Collecting cachetools>=4.2.1 (from pymc3>=3.9->exoplanet)
Obtaining dependency information for cachetools>=4.2.1 from https://files.pythonhosted.org/packages/a9/c9/c8a7710f2cedcb1db9224fdd4d8307c9e48cbddc46c18b515fefc0f1abbe/cachetools-5.3.1-py3-none-any.whl.metadata
Using cached cachetools-5.3.1-py3-none-any.whl.metadata (5.2 kB)
Collecting deprecat (from pymc3>=3.9->exoplanet)
Using cached deprecat-2.1.1-py2.py3-none-any.whl (9.8 kB)
Collecting dill (from pymc3>=3.9->exoplanet)
Obtaining dependency information for dill from https://files.pythonhosted.org/packages/f5/3a/74a29b11cf2cdfcd6ba89c0cecd70b37cd1ba7b77978ce611eb7a146a832/dill-0.3.7-py3-none-any.whl.metadata
Using cached dill-0.3.7-py3-none-any.whl.metadata (9.9 kB)
Collecting fastprogress>=0.2.0 (from pymc3>=3.9->exoplanet)
Using cached fastprogress-1.0.3-py3-none-any.whl (12 kB)
Collecting pandas>=0.24.0 (from pymc3>=3.9->exoplanet)
Obtaining dependency information for pandas>=0.24.0 from https://files.pythonhosted.org/packages/b3/92/a5e5133421b49e901a12e02a6a7ef3a0130e10d13db8cb657fdd0cba3b90/pandas-2.0.3-cp311-cp311-macosx_10_9_x86_64.whl.metadata
Using cached pandas-2.0.3-cp311-cp311-macosx_10_9_x86_64.whl.metadata (18 kB)
Collecting patsy>=0.5.1 (from pymc3>=3.9->exoplanet)
Using cached patsy-0.5.3-py2.py3-none-any.whl (233 kB)
INFO: pip is looking at multiple versions of pymc3 to determine which version is compatible with other requirements. This could take a while.
Collecting pymc3>=3.9 (from exoplanet)
Using cached pymc3-3.11.4-py3-none-any.whl (869 kB)
Collecting scipy>=1.2.0 (from pymc3>=3.9->exoplanet)
Obtaining dependency information for scipy>=1.2.0 from https://files.pythonhosted.org/packages/c7/09/c07278f3c75018f80288032b09acd76aa4c2056cdb7fa9b0a145bac6b06b/scipy-1.11.1-cp311-cp311-macosx_10_9_x86_64.whl.metadata
Using cached scipy-1.11.1-cp311-cp311-macosx_10_9_x86_64.whl.metadata (54 kB)
Collecting semver>=2.13.0 (from pymc3>=3.9->exoplanet)
Obtaining dependency information for semver>=2.13.0 from https://files.pythonhosted.org/packages/d4/5d/f2b4fe45886238c405ad177ca43911cb1459d08003004da5c27495eb4216/semver-3.0.1-py3-none-any.whl.metadata
Using cached semver-3.0.1-py3-none-any.whl.metadata (5.5 kB)
Collecting theano-pymc==1.1.2 (from pymc3>=3.9->exoplanet)
Using cached Theano_PyMC-1.1.2-py3-none-any.whl
Collecting typing-extensions>=3.7.4 (from pymc3>=3.9->exoplanet)
Obtaining dependency information for typing-extensions>=3.7.4 from https://files.pythonhosted.org/packages/ec/6b/63cc3df74987c36fe26157ee12e09e8f9db4de771e0f3404263117e75b95/typing_extensions-4.7.1-py3-none-any.whl.metadata
Using cached typing_extensions-4.7.1-py3-none-any.whl.metadata (3.1 kB)
Collecting filelock (from theano-pymc==1.1.2->pymc3>=3.9->exoplanet)
Obtaining dependency information for filelock from https://files.pythonhosted.org/packages/00/45/ec3407adf6f6b5bf867a4462b2b0af27597a26bd3cd6e2534cb6ab029938/filelock-3.12.2-py3-none-any.whl.metadata
Using cached filelock-3.12.2-py3-none-any.whl.metadata (2.7 kB)
Requirement already satisfied: setuptools>=60.0.0 in ./anaconda3/envs/env3114Exoplanet/lib/python3.11/site-packages (from arviz>=0.11.0->pymc3>=3.9->exoplanet) (68.0.0)
Collecting matplotlib>=3.2 (from arviz>=0.11.0->pymc3>=3.9->exoplanet)
Obtaining dependency information for matplotlib>=3.2 from https://files.pythonhosted.org/packages/7e/2c/1e25437f4419f2828bbd213be42c8fd23a3b795c5c4bb776987d177fc615/matplotlib-3.7.2-cp311-cp311-macosx_10_12_x86_64.whl.metadata
Using cached matplotlib-3.7.2-cp311-cp311-macosx_10_12_x86_64.whl.metadata (5.6 kB)
Collecting xarray>=0.21.0 (from arviz>=0.11.0->pymc3>=3.9->exoplanet)
Obtaining dependency information for xarray>=0.21.0 from https://files.pythonhosted.org/packages/cf/2f/e696512aa1e4e2ee1cf1e0bdbab6042f6c782058eb0a4367184ce4343f36/xarray-2023.7.0-py3-none-any.whl.metadata
Using cached xarray-2023.7.0-py3-none-any.whl.metadata (6.0 kB)
Collecting h5netcdf>=1.0.2 (from arviz>=0.11.0->pymc3>=3.9->exoplanet)
Obtaining dependency information for h5netcdf>=1.0.2 from https://files.pythonhosted.org/packages/d1/11/8116d6f209c8588ceb1382fddb8820fc720330373d9bd1a09434d684dbde/h5netcdf-1.2.0-py3-none-any.whl.metadata
Using cached h5netcdf-1.2.0-py3-none-any.whl.metadata (13 kB)
Collecting xarray-einstats>=0.3 (from arviz>=0.11.0->pymc3>=3.9->exoplanet)
Obtaining dependency information for xarray-einstats>=0.3 from https://files.pythonhosted.org/packages/ad/fc/99e00b0498d9f7258a89bd1b76baa8d8af84dd745d48b6f99f5fb399a91e/xarray_einstats-0.6.0-py3-none-any.whl.metadata
Using cached xarray_einstats-0.6.0-py3-none-any.whl.metadata (5.7 kB)
Collecting python-dateutil>=2.8.2 (from pandas>=0.24.0->pymc3>=3.9->exoplanet)
Using cached python_dateutil-2.8.2-py2.py3-none-any.whl (247 kB)
Collecting pytz>=2020.1 (from pandas>=0.24.0->pymc3>=3.9->exoplanet)
Using cached pytz-2023.3-py2.py3-none-any.whl (502 kB)
Collecting tzdata>=2022.1 (from pandas>=0.24.0->pymc3>=3.9->exoplanet)
Using cached tzdata-2023.3-py2.py3-none-any.whl (341 kB)
INFO: pip is looking at multiple versions of pandas to determine which version is compatible with other requirements. This could take a while.
Collecting pandas>=0.24.0 (from pymc3>=3.9->exoplanet)
Obtaining dependency information for pandas>=0.24.0 from https://files.pythonhosted.org/packages/2a/49/be958fefa589186b54daaa9a72fa1a2e19e42a2dcab87ee15c8273259da0/pandas-2.0.2-cp311-cp311-macosx_10_9_x86_64.whl.metadata
Using cached pandas-2.0.2-cp311-cp311-macosx_10_9_x86_64.whl.metadata (18 kB)
Using cached pandas-2.0.1-cp311-cp311-macosx_10_9_x86_64.whl (11.6 MB)
Using cached pandas-2.0.0-cp311-cp311-macosx_10_9_x86_64.whl (11.6 MB)
Using cached pandas-1.5.3-cp311-cp311-macosx_10_9_x86_64.whl (11.9 MB)
Using cached pandas-1.5.2-cp311-cp311-macosx_10_9_x86_64.whl (11.9 MB)
Using cached pandas-1.5.1-cp311-cp311-macosx_10_9_x86_64.whl (11.8 MB)
Collecting six (from patsy>=0.5.1->pymc3>=3.9->exoplanet)
Using cached six-1.16.0-py2.py3-none-any.whl (11 kB)
INFO: pip is looking at multiple versions of scipy to determine which version is compatible with other requirements. This could take a while.
Collecting scipy>=1.2.0 (from pymc3>=3.9->exoplanet)
Using cached scipy-1.10.1-cp311-cp311-macosx_10_9_x86_64.whl (35.0 MB)
Collecting h5py (from h5netcdf>=1.0.2->arviz>=0.11.0->pymc3>=3.9->exoplanet)
Obtaining dependency information for h5py from https://files.pythonhosted.org/packages/06/3e/935ebbd6cccd0b7965aaaceebabce979e032f15eacfeca12276e790a3e8b/h5py-3.9.0-cp311-cp311-macosx_10_9_x86_64.whl.metadata
Using cached h5py-3.9.0-cp311-cp311-macosx_10_9_x86_64.whl.metadata (2.5 kB)
Collecting contourpy>=1.0.1 (from matplotlib>=3.2->arviz>=0.11.0->pymc3>=3.9->exoplanet)
Obtaining dependency information for contourpy>=1.0.1 from https://files.pythonhosted.org/packages/92/4d/fe7a7098d98a8889252105193f5e869532f9dc37e39d917a82d2b0b874a1/contourpy-1.1.0-cp311-cp311-macosx_10_9_x86_64.whl.metadata
Using cached contourpy-1.1.0-cp311-cp311-macosx_10_9_x86_64.whl.metadata (5.7 kB)
Collecting cycler>=0.10 (from matplotlib>=3.2->arviz>=0.11.0->pymc3>=3.9->exoplanet)
Using cached cycler-0.11.0-py3-none-any.whl (6.4 kB)
Collecting fonttools>=4.22.0 (from matplotlib>=3.2->arviz>=0.11.0->pymc3>=3.9->exoplanet)
Obtaining dependency information for fonttools>=4.22.0 from https://files.pythonhosted.org/packages/e8/e0/d1a65471a945b0764ee17ce4afb59af8761b33c4418ca35687639315fcb7/fonttools-4.42.0-cp311-cp311-macosx_10_9_x86_64.whl.metadata
Using cached fonttools-4.42.0-cp311-cp311-macosx_10_9_x86_64.whl.metadata (150 kB)
Collecting kiwisolver>=1.0.1 (from matplotlib>=3.2->arviz>=0.11.0->pymc3>=3.9->exoplanet)
Using cached kiwisolver-1.4.4-cp311-cp311-macosx_10_9_x86_64.whl (65 kB)
Collecting pillow>=6.2.0 (from matplotlib>=3.2->arviz>=0.11.0->pymc3>=3.9->exoplanet)
Obtaining dependency information for pillow>=6.2.0 from https://files.pythonhosted.org/packages/7a/54/f6a14d95cba8ff082c550d836c9e5c23f1641d2ac291c23efe0494219b8c/Pillow-10.0.0-cp311-cp311-macosx_10_10_x86_64.whl.metadata
Using cached Pillow-10.0.0-cp311-cp311-macosx_10_10_x86_64.whl.metadata (9.5 kB)
Collecting pyparsing<3.1,>=2.3.1 (from matplotlib>=3.2->arviz>=0.11.0->pymc3>=3.9->exoplanet)
Using cached pyparsing-3.0.9-py3-none-any.whl (98 kB)
Using cached astropy-5.3.2-cp311-cp311-macosx_10_9_x86_64.whl (7.1 MB)
Using cached arviz-0.16.1-py3-none-any.whl (1.7 MB)
Using cached cachetools-5.3.1-py3-none-any.whl (9.3 kB)
Using cached PyYAML-6.0.1-cp311-cp311-macosx_10_9_x86_64.whl (187 kB)
Using cached semver-3.0.1-py3-none-any.whl (17 kB)
Using cached typing_extensions-4.7.1-py3-none-any.whl (33 kB)
Using cached dill-0.3.7-py3-none-any.whl (115 kB)
Using cached h5netcdf-1.2.0-py3-none-any.whl (43 kB)
Using cached matplotlib-3.7.2-cp311-cp311-macosx_10_12_x86_64.whl (7.4 MB)
Using cached xarray-2023.7.0-py3-none-any.whl (1.0 MB)
Using cached xarray_einstats-0.6.0-py3-none-any.whl (31 kB)
Using cached filelock-3.12.2-py3-none-any.whl (10 kB)
Using cached contourpy-1.1.0-cp311-cp311-macosx_10_9_x86_64.whl (243 kB)
Using cached fonttools-4.42.0-cp311-cp311-macosx_10_9_x86_64.whl (2.2 MB)
Using cached Pillow-10.0.0-cp311-cp311-macosx_10_10_x86_64.whl (3.4 MB)
Using cached h5py-3.9.0-cp311-cp311-macosx_10_9_x86_64.whl (3.2 MB)
Building wheels for collected packages: numpy
Building wheel for numpy (pyproject.toml) ... error
error: subprocess-exited-with-error
× Building wheel for numpy (pyproject.toml) did not run successfully.
│ exit code: 1
╰─> [1212 lines of output]
setup.py:63: RuntimeWarning: NumPy 1.21.1 may not yet support Python 3.11.
warnings.warn(
Running from numpy source directory.
Processing numpy/random/_bounded_integers.pxd.in
Processing numpy/random/_philox.pyx
Processing numpy/random/_bounded_integers.pyx.in
Processing numpy/random/_sfc64.pyx
Processing numpy/random/_mt19937.pyx
Processing numpy/random/bit_generator.pyx
Processing numpy/random/mtrand.pyx
Processing numpy/random/_generator.pyx
Processing numpy/random/_pcg64.pyx
Processing numpy/random/_common.pyx
Cythonizing sources
blas_opt_info:
blas_mkl_info:
customize UnixCCompiler
libraries mkl_rt not found in ['/Users/josephkarpinski/anaconda3/envs/env3114Exoplanet/lib', '/usr/local/lib', '/usr/lib']
NOT AVAILABLE
note: This error originates from a subprocess, and is likely not a problem with pip.
ERROR: Failed building wheel for numpy
Failed to build numpy
ERROR: Could not build wheels for numpy, which is required to install pyproject.toml-based projects
The text was updated successfully, but these errors were encountered: