_pkgdown.yml

url: https://epiverse-trace.github.io/superspreading
template:
  includes:
    in_header: |
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  package: epiversetheme
  bslib:
    font_weight_base : 300

development:
  mode: auto

reference:
  - title: Offspring distributions

  - subtitle: Poisson-lognormal
    desc: PDF and CDF functions for the Poisson-lognormal compound distribution
    contents:
    - ends_with("poislnorm")

  - subtitle: Poisson-Weibull
    desc: PDF and CDF functions for the Poisson-Weibull compound distribution
    contents:
    - ends_with("poisweibull")

  - title: Probability of epidemic, extinction or containment
    desc: Probability of a disease causing an epidemic, going extinct or being contained
    contents:
    - starts_with("probability")

  - title: Proportion of transmission
    contents:
    - proportion_transmission
    - proportion_cluster_size

  - title: Reproduction number in heterogeneous network
    contents:
    - calc_network_R

  - title: Helper functions
    contents:
    - ic_tbl

  - title: Constants
    contents:
    - constants

articles:
- title: Parameter estimation
  navbar: Parameter estimation
  contents:
  - estimate_individual_level_transmission
  - heterogeneous_network_outbreaks
- title: Superspreading for decision-making
  navbar: Superspreading for decision-making
  contents:
  - epidemic_risk
- title: Proportion transmission
  navbar: Proportion transmission
  contents:
  - proportion_transmission
- title: Developer Documentation
  navbar: Developer Documentation
  contents:
  - design-principles