diff --git a/CHANGES.txt b/CHANGES.txt index 01edc08b5b..2f6a6da971 100755 --- a/CHANGES.txt +++ b/CHANGES.txt @@ -1,4 +1,12 @@ -2.0 +2.0.1 + + * A critical bug that prevented plotPCA from running was fixed. + * multiBamCoverage was renamed to multiBamSummary, to be in better alignment with multiBigwigSummary. + * computeGCBias and correctGCBias are now more tolerant of chromosome name mismatches. + * multiBigwigSummary and multiBamSummary can accept a single bigWig/BAM input file, though one should use the + --outRawCounts argument. + +2.0.0 * Documentation improved and migrated to http://deeptools.readthedocs.org The API to use deepTools modules is now part of the documentation and includes a tutorial.