Tester.java

public class Tester {

    public static long SEED = 8675309;

    public static void main(String[] args) throws InterruptedException {

        // construct a simulation object w/ appropriate parameters and then run
        int numCells = Parameters.NUM_CELLS;
        int guiCellWidth = Parameters.GUI_CELL_WIDTH;
        double initResourceMean = Parameters.INIT_RESOURCE_MEAN;
        double initResourceSD = Parameters.INIT_RESOURCE_SD;
        double regrowthRateMean = Parameters.REGROWTH_RATE_MEAN;
        double regrowthRateSD = Parameters.REGROWTH_RATE_SD;
        double maxResourceMean = Parameters.MAX_RESOURCE_MEAN;
        double maxResourceSD = Parameters.MAX_RESOURCE_SD;
        int numMacrophages = Parameters.NUM_MACROPHAGES;
        double macSpeed = Parameters.MACRO_INTER_MOVE;
        double macDivRate = Parameters.MACRO_INTER_DIVIDE;
        int minBactToDivide = Parameters.MIN_BACT_TO_DIVIDE;
        int numBacteria = Parameters.NUM_BACTERIA;
        double bacSpeed = Parameters.BACT_INTER_MOVE;
        double bacDivRate = Parameters.BACT_INTER_DIVIDE;
        //double bacDivScale = 2.0;
        double consumptionRateMean = Parameters.CONSUMPTION_RATE_MEAN;
        double consumptionRateSD = Parameters.CONSUMPTION_RATE_SD;
        double maxTime = Parameters.MAX_TIME;
        double guiDelayInSecs = Parameters.GUI_DELAY_IN_SECS;
        long seed = Parameters.SEED;

        /*
        if(args.length > 0){ // if they provided command-line args, use those instead
          try{
            numCells = Integer.parseInt(args[0]);
            guiCellWidth = Integer.parseInt(args[1]);
            numMacrophages = Integer.parseInt(args[2]);
            macSpeed = Double.parseDouble(args[3]);
            numBacteria = Integer.parseInt(args[4]);
            bacSpeed = Double.parseDouble(args[5]);
            bacDivShape = Integer.parseInt(args[6]);
            bacDivScale = Double.parseDouble(args[7]);
            maxTime = Double.parseDouble(args[8]);
            guiDelayInSecs = Double.parseDouble(args[9]);
            SEED = Long.parseLong(args[10]);
          } catch (Exception e) {
            System.out.println("Usage: java Tester <int numCells> <int guiCellWidth> "
                +"<int numMacrophages> <double macSpeed> <int numBacteria> <double bacSpeed> "
                +"<int bacDivShape> <double bacDivScale> <double maxTime> <double "
                +" guiDelayInSecs> <long seed>");
            return;
          }
        }
         */
        Simulation s = new Simulation(numCells, guiCellWidth, initResourceMean,
                initResourceSD, regrowthRateMean, regrowthRateSD, maxResourceMean,
                maxResourceSD, numMacrophages, macSpeed, macDivRate, minBactToDivide,
                numBacteria, bacSpeed, bacDivRate, consumptionRateMean,
                consumptionRateSD,seed, maxTime);
        s.run(guiDelayInSecs);
    }
}