From 56e8372f9688a9f3164f31fd4cc3519a5356288c Mon Sep 17 00:00:00 2001 From: Tracy Teal Date: Tue, 21 Nov 2017 04:57:28 -0800 Subject: [PATCH 1/2] updated information on the data availability --- setup.md | 14 ++++++++++++-- 1 file changed, 12 insertions(+), 2 deletions(-) diff --git a/setup.md b/setup.md index d9067008..28a6eb71 100644 --- a/setup.md +++ b/setup.md @@ -19,7 +19,7 @@ If you are taking a Genomics Data Carpentry workshop, instances will be set up f If you're an instructor or maintainer or want to contribute to these lessons, please get in touch with us [team@carpentries.org](mailto:team@carpentries.org) and we will start instances for you. -You can also start your own instance if you're using these lessons for self-guided learning. Use the [information on creating an Amazon instance](http://www.datacarpentry.org/cloud-genomics/discuss/). The cost of using this AMI for a few days, with the t2.medium instance type is very low. +You can also start your own instance if you're using these lessons for self-guided learning. Use the [information on creating an Amazon instance](http://www.datacarpentry.org/cloud-genomics/LaunchingInstances/). The cost of using this AMI for a few days, with the t2.medium instance type is very low. ## Option B: Using the lessons on your local machine @@ -29,7 +29,17 @@ dataset. Instructions for doing this are below. ### Data -Instructions on getting data go here. +The data used in this workshop is available on the Open Science Framework (OSF). Because this workshop works with real data, be aware that file sizes for the data are large. + +[https://osf.io/ycu8j/](https://osf.io/ycu8j/) + +This includes the data used in the exercises, as well as solutions to the exercises. These solutions can be useful if you're working through the lessons, starting at a later module and need the solutions from previous exercises. + +There are two directories: +- dc_sample_data (124K) +- .dc_sampledata_lite (51GB) + +You can also access the data by [starting the Amazon AMI that has the data](http://www.datacarpentry.org/cloud-genomics/LaunchingInstances/). ### Software From 3343eff9d16449f46a4cc64902252b7d3c15b783 Mon Sep 17 00:00:00 2001 From: Tracy Teal Date: Tue, 21 Nov 2017 08:31:20 -0800 Subject: [PATCH 2/2] added data info to setup --- setup.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/setup.md b/setup.md index 28a6eb71..9b894c9b 100644 --- a/setup.md +++ b/setup.md @@ -12,7 +12,7 @@ instances. All the software and data used in the workshop are hosted on an Amazo ## Option A: Using the lessons with Amazon Web Services (AWS) To run your own instance of the server used for this workshop, launch a t2.medium -instance in the N. Virginia region with AMI `ami-373ab74d`, available under "Community +instance in the N. Virginia region with AMI `ami-373ab74d` "Data Carpentry Genomics release 1.0", available under "Community AMIs" in the Amazon EC2 Management Console. If you are taking a Genomics Data Carpentry workshop, instances will be set up for you. Follow the instructions on [connecting to Data Carpentry Genomics Amazon instances](http://www.datacarpentry.org/cloud-genomics/02-logging-onto-cloud/) to connect to the instance.