From b3802f17d2a7d5d68ae2fe390af36e3154263170 Mon Sep 17 00:00:00 2001
From: GitHub Actions <actions@github.com>
Date: Tue, 13 Feb 2024 00:17:04 +0000
Subject: [PATCH] site deploy

Auto-generated via {sandpaper}
Source  : 32762b26c5be50b6ba42f9845fce4e51b5870c44
Branch  : md-outputs
Author  : GitHub Actions <actions@github.com>
Time    : 2024-01-08 16:14:01 +0000
Message : markdown source builds

Auto-generated via {sandpaper}
Source  : 45576245a8799afbe01267c586adefe8733047af
Branch  : main
Author  : Travis Wrightsman <tw493@cornell.edu>
Time    : 2024-01-08 16:12:34 +0000
Message : Merge pull request #153 from datacarpentry/rm-trailing-slash-link

rm trailing slash that breaks link
---
 404.html                         | 4 ++--
 AMI-setup.html                   | 6 +++---
 CODE_OF_CONDUCT.html             | 2 +-
 LICENSE.html                     | 2 +-
 faq.html                         | 2 +-
 index.html                       | 4 ++--
 instructor-notes.html            | 4 ++--
 instructor/404.html              | 4 ++--
 instructor/AMI-setup.html        | 6 +++---
 instructor/CODE_OF_CONDUCT.html  | 2 +-
 instructor/LICENSE.html          | 2 +-
 instructor/faq.html              | 2 +-
 instructor/index.html            | 4 ++--
 instructor/instructor-notes.html | 4 ++--
 instructor/profiles.html         | 4 ++--
 instructor/reference.html        | 2 +-
 instructor/teaching_demos.html   | 2 +-
 pkgdown.yml                      | 2 +-
 profiles.html                    | 4 ++--
 reference.html                   | 2 +-
 teaching_demos.html              | 2 +-
 21 files changed, 33 insertions(+), 33 deletions(-)

diff --git a/404.html b/404.html
index 13f6b9fc..9b4cb664 100644
--- a/404.html
+++ b/404.html
@@ -217,8 +217,8 @@ <h1>Page not found</h1>
   "url": "https://datacarpentry.github.io/genomics-workshop/404.html",
   "identifier": "https://datacarpentry.github.io/genomics-workshop/404.html",
   "dateCreated": "2015-06-03",
-  "dateModified": "2024-02-06",
-  "datePublished": "2024-02-06"
+  "dateModified": "2024-02-13",
+  "datePublished": "2024-02-13"
 }
 
   </script><script>
diff --git a/AMI-setup.html b/AMI-setup.html
index 1cafd371..5ef66bf5 100644
--- a/AMI-setup.html
+++ b/AMI-setup.html
@@ -275,7 +275,7 @@ <h4 id="sign-into-aws-and-launch-an-instance">Sign into AWS and Launch an Instan
   <h3 class="accordion-header" id="headingSpoiler1">
 <div class="note-square"><i aria-hidden="true" class="callout-icon" data-feather="eye"></i></div>Connect to your Amazon Instance (MacOS/Linux)</h3>
 </button>
-<div id="collapseSpoiler1" class="accordion-collapse collapse" aria-labelledby="headingSpoiler1" data-bs-parent="#accordionSpoiler1">
+<div id="collapseSpoiler1" class="accordion-collapse collapse" data-bs-parent="#accordionSpoiler1" aria-labelledby="headingSpoiler1">
 <div class="accordion-body">
 <ol style="list-style-type: decimal"><li><p>Log into your AWC EC2 Dashboard <a href="https://console.aws.amazon.com/ec2/" class="external-link">https://console.aws.amazon.com/ec2/</a></p></li>
 <li><p>You should see that you have one instance. To proceed, the
@@ -330,7 +330,7 @@ <h3 class="code-label">BASH<i aria-hidden="true" data-feather="chevron-left"></i
   <h3 class="accordion-header" id="headingSpoiler2">
 <div class="note-square"><i aria-hidden="true" class="callout-icon" data-feather="eye"></i></div>Connect to your Amazon instance (Windows)</h3>
 </button>
-<div id="collapseSpoiler2" class="accordion-collapse collapse" aria-labelledby="headingSpoiler2" data-bs-parent="#accordionSpoiler2">
+<div id="collapseSpoiler2" class="accordion-collapse collapse" data-bs-parent="#accordionSpoiler2" aria-labelledby="headingSpoiler2">
 <div class="accordion-body">
 <ol style="list-style-type: decimal"><li><p>Download the PuTTY application at: <a href="https://the.earth.li/~sgtatham/putty/latest/x86/putty.exe" class="external-link">http://the.earth.li/~sgtatham/putty/latest/x86/putty.exe</a></p></li>
 <li><p>Log into your AWC EC2 Dashboard <a href="https://console.aws.amazon.com/ec2/" class="external-link">https://console.aws.amazon.com/ec2/</a></p></li>
@@ -471,7 +471,7 @@ <h3 class="callout-title">Warning<a class="anchor" aria-label="anchor" href="#wa
   "identifier": "https://datacarpentry.github.io/genomics-workshop/AMI-setup.html",
   "dateCreated": "2015-06-03",
   "dateModified": "2023-09-19",
-  "datePublished": "2024-02-06"
+  "datePublished": "2024-02-13"
 }
 
   </script><script>
diff --git a/CODE_OF_CONDUCT.html b/CODE_OF_CONDUCT.html
index 3d3047cc..9a7796db 100644
--- a/CODE_OF_CONDUCT.html
+++ b/CODE_OF_CONDUCT.html
@@ -244,7 +244,7 @@ <h1>Contributor Code of Conduct</h1>
   "identifier": "https://datacarpentry.github.io/genomics-workshop/CODE_OF_CONDUCT.html",
   "dateCreated": "2015-06-03",
   "dateModified": "2023-09-19",
-  "datePublished": "2024-02-06"
+  "datePublished": "2024-02-13"
 }
 
   </script><script>
diff --git a/LICENSE.html b/LICENSE.html
index 59959581..02f2ca55 100644
--- a/LICENSE.html
+++ b/LICENSE.html
@@ -296,7 +296,7 @@ <h1>Licenses</h1>
   "identifier": "https://datacarpentry.github.io/genomics-workshop/LICENSE.html",
   "dateCreated": "2015-06-03",
   "dateModified": "2023-09-19",
-  "datePublished": "2024-02-06"
+  "datePublished": "2024-02-13"
 }
 
   </script><script>
diff --git a/faq.html b/faq.html
index eebaf879..dc2b520f 100644
--- a/faq.html
+++ b/faq.html
@@ -418,7 +418,7 @@ <h3 id="does-the-aws-image-location-matter-do-i-need-to-set-up-an-ami-in-a-diffe
   "identifier": "https://datacarpentry.github.io/genomics-workshop/faq.html",
   "dateCreated": "2015-06-03",
   "dateModified": "2024-01-08",
-  "datePublished": "2024-02-06"
+  "datePublished": "2024-02-13"
 }
 
   </script><script>
diff --git a/index.html b/index.html
index 2eff7075..f086bb9f 100644
--- a/index.html
+++ b/index.html
@@ -971,8 +971,8 @@ <h3 id="igv">IGV<a class="anchor" aria-label="anchor" href="#igv"></a></h3>
   "url": "https://datacarpentry.github.io/genomics-workshop/index.html",
   "identifier": "https://datacarpentry.github.io/genomics-workshop/index.html",
   "dateCreated": "2015-06-03",
-  "dateModified": "2024-02-06",
-  "datePublished": "2024-02-06"
+  "dateModified": "2024-02-13",
+  "datePublished": "2024-02-13"
 }
 
   </script><script>
diff --git a/instructor-notes.html b/instructor-notes.html
index c0c99114..7c0feb65 100644
--- a/instructor-notes.html
+++ b/instructor-notes.html
@@ -244,8 +244,8 @@ <h4 id="installation">Installation<a class="anchor" aria-label="anchor" href="#i
   "url": "https://datacarpentry.github.io/genomics-workshop/instructor-notes.html",
   "identifier": "https://datacarpentry.github.io/genomics-workshop/instructor-notes.html",
   "dateCreated": "2015-06-03",
-  "dateModified": "2024-02-06",
-  "datePublished": "2024-02-06"
+  "dateModified": "2024-02-13",
+  "datePublished": "2024-02-13"
 }
 
   </script><script>
diff --git a/instructor/404.html b/instructor/404.html
index 9549b14f..f10e724a 100644
--- a/instructor/404.html
+++ b/instructor/404.html
@@ -211,8 +211,8 @@ <h1>Page not found</h1>
   "url": "https://datacarpentry.github.io/genomics-workshop/instructor/404.html",
   "identifier": "https://datacarpentry.github.io/genomics-workshop/instructor/404.html",
   "dateCreated": "2015-06-03",
-  "dateModified": "2024-02-06",
-  "datePublished": "2024-02-06"
+  "dateModified": "2024-02-13",
+  "datePublished": "2024-02-13"
 }
 
   </script><script>
diff --git a/instructor/AMI-setup.html b/instructor/AMI-setup.html
index f1c2d0e0..fc722181 100644
--- a/instructor/AMI-setup.html
+++ b/instructor/AMI-setup.html
@@ -271,7 +271,7 @@ <h4 id="sign-into-aws-and-launch-an-instance">Sign into AWS and Launch an Instan
   <h3 class="accordion-header" id="headingSpoiler1">
 <div class="note-square"><i aria-hidden="true" class="callout-icon" data-feather="eye"></i></div>Connect to your Amazon Instance (MacOS/Linux)</h3>
 </button>
-<div id="collapseSpoiler1" class="accordion-collapse collapse" aria-labelledby="headingSpoiler1" data-bs-parent="#accordionSpoiler1">
+<div id="collapseSpoiler1" class="accordion-collapse collapse" data-bs-parent="#accordionSpoiler1" aria-labelledby="headingSpoiler1">
 <div class="accordion-body">
 <ol style="list-style-type: decimal"><li><p>Log into your AWC EC2 Dashboard <a href="https://console.aws.amazon.com/ec2/" class="external-link">https://console.aws.amazon.com/ec2/</a></p></li>
 <li><p>You should see that you have one instance. To proceed, the
@@ -326,7 +326,7 @@ <h3 class="code-label">BASH<i aria-hidden="true" data-feather="chevron-left"></i
   <h3 class="accordion-header" id="headingSpoiler2">
 <div class="note-square"><i aria-hidden="true" class="callout-icon" data-feather="eye"></i></div>Connect to your Amazon instance (Windows)</h3>
 </button>
-<div id="collapseSpoiler2" class="accordion-collapse collapse" aria-labelledby="headingSpoiler2" data-bs-parent="#accordionSpoiler2">
+<div id="collapseSpoiler2" class="accordion-collapse collapse" data-bs-parent="#accordionSpoiler2" aria-labelledby="headingSpoiler2">
 <div class="accordion-body">
 <ol style="list-style-type: decimal"><li><p>Download the PuTTY application at: <a href="https://the.earth.li/~sgtatham/putty/latest/x86/putty.exe" class="external-link">http://the.earth.li/~sgtatham/putty/latest/x86/putty.exe</a></p></li>
 <li><p>Log into your AWC EC2 Dashboard <a href="https://console.aws.amazon.com/ec2/" class="external-link">https://console.aws.amazon.com/ec2/</a></p></li>
@@ -467,7 +467,7 @@ <h3 class="callout-title">Warning<a class="anchor" aria-label="anchor" href="#wa
   "identifier": "https://datacarpentry.github.io/genomics-workshop/instructor/AMI-setup.html",
   "dateCreated": "2015-06-03",
   "dateModified": "2023-09-19",
-  "datePublished": "2024-02-06"
+  "datePublished": "2024-02-13"
 }
 
   </script><script>
diff --git a/instructor/CODE_OF_CONDUCT.html b/instructor/CODE_OF_CONDUCT.html
index 133727e3..b5d09073 100644
--- a/instructor/CODE_OF_CONDUCT.html
+++ b/instructor/CODE_OF_CONDUCT.html
@@ -240,7 +240,7 @@ <h1>Contributor Code of Conduct</h1>
   "identifier": "https://datacarpentry.github.io/genomics-workshop/instructor/CODE_OF_CONDUCT.html",
   "dateCreated": "2015-06-03",
   "dateModified": "2023-09-19",
-  "datePublished": "2024-02-06"
+  "datePublished": "2024-02-13"
 }
 
   </script><script>
diff --git a/instructor/LICENSE.html b/instructor/LICENSE.html
index 985b5d2a..a288702f 100644
--- a/instructor/LICENSE.html
+++ b/instructor/LICENSE.html
@@ -292,7 +292,7 @@ <h1>Licenses</h1>
   "identifier": "https://datacarpentry.github.io/genomics-workshop/instructor/LICENSE.html",
   "dateCreated": "2015-06-03",
   "dateModified": "2023-09-19",
-  "datePublished": "2024-02-06"
+  "datePublished": "2024-02-13"
 }
 
   </script><script>
diff --git a/instructor/faq.html b/instructor/faq.html
index 395eebbf..aee3989d 100644
--- a/instructor/faq.html
+++ b/instructor/faq.html
@@ -414,7 +414,7 @@ <h3 id="does-the-aws-image-location-matter-do-i-need-to-set-up-an-ami-in-a-diffe
   "identifier": "https://datacarpentry.github.io/genomics-workshop/instructor/faq.html",
   "dateCreated": "2015-06-03",
   "dateModified": "2024-01-08",
-  "datePublished": "2024-02-06"
+  "datePublished": "2024-02-13"
 }
 
   </script><script>
diff --git a/instructor/index.html b/instructor/index.html
index f6b7ede3..8eb6588e 100644
--- a/instructor/index.html
+++ b/instructor/index.html
@@ -970,8 +970,8 @@ <h3 id="igv">IGV<a class="anchor" aria-label="anchor" href="#igv"></a></h3>
   "url": "https://datacarpentry.github.io/genomics-workshop/instructor/index.html",
   "identifier": "https://datacarpentry.github.io/genomics-workshop/instructor/index.html",
   "dateCreated": "2015-06-03",
-  "dateModified": "2024-02-06",
-  "datePublished": "2024-02-06"
+  "dateModified": "2024-02-13",
+  "datePublished": "2024-02-13"
 }
 
   </script><script>
diff --git a/instructor/instructor-notes.html b/instructor/instructor-notes.html
index 3b9b42eb..3ba10bda 100644
--- a/instructor/instructor-notes.html
+++ b/instructor/instructor-notes.html
@@ -238,8 +238,8 @@ <h4 id="installation">Installation<a class="anchor" aria-label="anchor" href="#i
   "url": "https://datacarpentry.github.io/genomics-workshop/instructor/instructor-notes.html",
   "identifier": "https://datacarpentry.github.io/genomics-workshop/instructor/instructor-notes.html",
   "dateCreated": "2015-06-03",
-  "dateModified": "2024-02-06",
-  "datePublished": "2024-02-06"
+  "dateModified": "2024-02-13",
+  "datePublished": "2024-02-13"
 }
 
   </script><script>
diff --git a/instructor/profiles.html b/instructor/profiles.html
index b463b0e5..fce97838 100644
--- a/instructor/profiles.html
+++ b/instructor/profiles.html
@@ -198,8 +198,8 @@ <h1>Learner Profiles</h1>
   "url": "https://datacarpentry.github.io/genomics-workshop/instructor/profiles.html",
   "identifier": "https://datacarpentry.github.io/genomics-workshop/instructor/profiles.html",
   "dateCreated": "2015-06-03",
-  "dateModified": "2024-02-06",
-  "datePublished": "2024-02-06"
+  "dateModified": "2024-02-13",
+  "datePublished": "2024-02-13"
 }
 
   </script><script>
diff --git a/instructor/reference.html b/instructor/reference.html
index c999bfc7..85fde741 100644
--- a/instructor/reference.html
+++ b/instructor/reference.html
@@ -233,7 +233,7 @@ <h1>Glossary</h1>
   "identifier": "https://datacarpentry.github.io/genomics-workshop/instructor/reference.html",
   "dateCreated": "2015-06-03",
   "dateModified": "2023-09-19",
-  "datePublished": "2024-02-06"
+  "datePublished": "2024-02-13"
 }
 
   </script><script>
diff --git a/instructor/teaching_demos.html b/instructor/teaching_demos.html
index 070c0780..db53f211 100644
--- a/instructor/teaching_demos.html
+++ b/instructor/teaching_demos.html
@@ -288,7 +288,7 @@ <h4 id="data-analysis-and-visualization-in-r"><a href="https://datacarpentry.org
   "identifier": "https://datacarpentry.github.io/genomics-workshop/instructor/teaching_demos.html",
   "dateCreated": "2015-06-03",
   "dateModified": "2023-10-02",
-  "datePublished": "2024-02-06"
+  "datePublished": "2024-02-13"
 }
 
   </script><script>
diff --git a/pkgdown.yml b/pkgdown.yml
index c3b522f9..7412f0ce 100644
--- a/pkgdown.yml
+++ b/pkgdown.yml
@@ -2,5 +2,5 @@ pandoc: 2.19.2
 pkgdown: 2.0.7
 pkgdown_sha: ~
 articles: {}
-last_built: 2024-02-06T00:16Z
+last_built: 2024-02-13T00:16Z
 
diff --git a/profiles.html b/profiles.html
index c09df373..caed8964 100644
--- a/profiles.html
+++ b/profiles.html
@@ -204,8 +204,8 @@ <h1>Learner Profiles</h1>
   "url": "https://datacarpentry.github.io/genomics-workshop/profiles.html",
   "identifier": "https://datacarpentry.github.io/genomics-workshop/profiles.html",
   "dateCreated": "2015-06-03",
-  "dateModified": "2024-02-06",
-  "datePublished": "2024-02-06"
+  "dateModified": "2024-02-13",
+  "datePublished": "2024-02-13"
 }
 
   </script><script>
diff --git a/reference.html b/reference.html
index b5c515e9..d6d29512 100644
--- a/reference.html
+++ b/reference.html
@@ -237,7 +237,7 @@ <h1>Glossary</h1>
   "identifier": "https://datacarpentry.github.io/genomics-workshop/reference.html",
   "dateCreated": "2015-06-03",
   "dateModified": "2023-09-19",
-  "datePublished": "2024-02-06"
+  "datePublished": "2024-02-13"
 }
 
   </script><script>
diff --git a/teaching_demos.html b/teaching_demos.html
index 0213c2e2..e5be0e98 100644
--- a/teaching_demos.html
+++ b/teaching_demos.html
@@ -292,7 +292,7 @@ <h4 id="data-analysis-and-visualization-in-r"><a href="https://datacarpentry.org
   "identifier": "https://datacarpentry.github.io/genomics-workshop/teaching_demos.html",
   "dateCreated": "2015-06-03",
   "dateModified": "2023-10-02",
-  "datePublished": "2024-02-06"
+  "datePublished": "2024-02-13"
 }
 
   </script><script>