Integrate with GeneTonic

[mlist]

https://bmcbioinformatics.biomedcentral.com/articles/10.1186/s12859-021-04461-5

https://bioconductor.org/packages/release/bioc/vignettes/GeneTonic/inst/doc/GeneTonic_manual.html

Q: I am using a different service/software for generating the results of functional enrichment analysis. How do I plug this into GeneTonic?

A: You can set up a small conversion function, on the line of shake_topGOtableResult and shake_enrichResult (use the source, Luke to see how you can build your own), or request such a function - make sure to specify the formatting specifications of your tool of choice (e.g. DAVID, g:Profiler, or commercial solutions such as Ingenuity Pathway Analysis).