From fa3804b80bfa527d3a87f07df53740c524acd76e Mon Sep 17 00:00:00 2001 From: Alexey Sergushichev Date: Mon, 15 Apr 2024 13:51:40 -0500 Subject: [PATCH] changed dee2 version in tutorial --- DESCRIPTION | 2 +- vignettes/phantasusLite-tutorial.Rmd | 2 +- 2 files changed, 2 insertions(+), 2 deletions(-) diff --git a/DESCRIPTION b/DESCRIPTION index c7cafb0..8048b01 100644 --- a/DESCRIPTION +++ b/DESCRIPTION @@ -1,7 +1,7 @@ Package: phantasusLite Type: Package Title: Loading and annotation RNA-seq counts matrices -Version: 1.1.1 +Version: 1.1.2 Authors@R: c(person("Rita", "Sablina", role = "aut"), person("Maxim", "Kleverov", role = "aut"), person("Alexey", "Sergushichev", email = "alsergbox@gmail.com", role = c("aut", "cre"))) diff --git a/vignettes/phantasusLite-tutorial.Rmd b/vignettes/phantasusLite-tutorial.Rmd index 2eb031a..f966413 100755 --- a/vignettes/phantasusLite-tutorial.Rmd +++ b/vignettes/phantasusLite-tutorial.Rmd @@ -72,7 +72,7 @@ GSE53053 dataset was sequenced from *Mus musculus* and we can get an expression from the corresponding HDF5-file with DEE2 data: ```{r} -file <- "dee2/mmusculus_star_matrix_20221107.h5" +file <- "dee2/mmusculus_star_matrix_20240409.h5" es <- loadCountsFromH5FileHSDS(es, url, file) head(exprs(es)) ```