From 416f30c2ab3b6e0eb6932a1a3389a1599f0c9b7a Mon Sep 17 00:00:00 2001 From: github-actions Date: Fri, 29 Nov 2024 13:42:09 +0000 Subject: [PATCH 1/3] GitHub Actions generated requirements_frozen.txt --- requirements_frozen.txt | 12 ++++++------ 1 file changed, 6 insertions(+), 6 deletions(-) diff --git a/requirements_frozen.txt b/requirements_frozen.txt index f3b2474b..3024ceb9 100644 --- a/requirements_frozen.txt +++ b/requirements_frozen.txt @@ -1,7 +1,7 @@ asgiref==3.8.1 backports.zoneinfo==0.2.1 -boto3==1.35.65 -botocore==1.35.65 +boto3==1.35.71 +botocore==1.35.71 certifi==2024.8.30 cffi==1.17.1 charset-normalizer==3.4.0 @@ -12,7 +12,7 @@ coreapi==2.3.3 coreschema==0.0.4 coverage==7.6.1 coveralls==4.0.1 -cryptography==43.0.3 +cryptography==44.0.0 cycler==0.12.1 Django==4.2.16 django-admin-list-filter-dropdown==1.0.3 @@ -69,12 +69,12 @@ python-magic==0.4.27 pytz==2024.2 PyYAML==6.0.2 requests==2.32.3 -s3transfer==0.10.3 +s3transfer==0.10.4 six==1.16.0 sqlparse==0.5.2 structlog==24.4.0 -tomli==2.1.0 -tqdm==4.67.0 +tomli==2.2.1 +tqdm==4.67.1 typing_extensions==4.12.2 tzdata==2024.2 uritemplate==4.1.1 From 58defb708750c623d2c06af9f7d97f538ef9b680 Mon Sep 17 00:00:00 2001 From: owinter Date: Sat, 21 Dec 2024 19:50:42 +0000 Subject: [PATCH 2/3] add saturation samples intervals dataset type --- alyx/data/fixtures/data.datasettype.json | 11 +++++++++++ 1 file changed, 11 insertions(+) diff --git a/alyx/data/fixtures/data.datasettype.json b/alyx/data/fixtures/data.datasettype.json index 030b640f..a3edebb4 100644 --- a/alyx/data/fixtures/data.datasettype.json +++ b/alyx/data/fixtures/data.datasettype.json @@ -1076,6 +1076,17 @@ "description": "JSON with one entry per probe containing the 7 parameters describing the probe trajectory. Refer to the coordinate section of this document for more information.\n 'x':(um) medio-lateral coordinate relative to Bregma, left negative\n 'y':(um) antero-posterior coordinate relative to Bregma, back negative\n 'z':(um) dorso-ventral coordinate relative to Bregma, ventral negative\n 'phi':(degrees)[-180 180] azimuth\n 'theta':(degrees)[0 180] polar angle\n 'depth':(um) insertion depth\n 'beta' :(degrees) roll angle of the probe\"", "filename_pattern": "probes.trajectory*.json" } + }, + { + "model": "data.datasettype", + "pk": "45228157-f565-48ce-9d96-0430cebdfaf7", + "fields": { + "json": null, + "name": "_iblqc_ephysSaturation.samples", + "created_by": null, + "description": "A list of sample intervals exhibiting voltage saturation on the raw recordings.", + "filename_pattern": "_iblqc_ephysSaturation.samples.npy" + } }, { "model": "data.datasettype", From 378e2f11244342a3795ce60629767baaa3afad75 Mon Sep 17 00:00:00 2001 From: github-actions Date: Sat, 21 Dec 2024 19:56:28 +0000 Subject: [PATCH 3/3] GitHub Actions generated requirements_frozen.txt --- requirements_frozen.txt | 20 ++++++++++---------- 1 file changed, 10 insertions(+), 10 deletions(-) diff --git a/requirements_frozen.txt b/requirements_frozen.txt index 3024ceb9..2c9b8afc 100644 --- a/requirements_frozen.txt +++ b/requirements_frozen.txt @@ -1,11 +1,11 @@ asgiref==3.8.1 backports.zoneinfo==0.2.1 -boto3==1.35.71 -botocore==1.35.71 -certifi==2024.8.30 +boto3==1.35.86 +botocore==1.35.86 +certifi==2024.12.14 cffi==1.17.1 charset-normalizer==3.4.0 -click==8.1.7 +click==8.1.8 colorlog==6.9.0 contourpy==1.1.1 coreapi==2.3.3 @@ -14,7 +14,7 @@ coverage==7.6.1 coveralls==4.0.1 cryptography==44.0.0 cycler==0.12.1 -Django==4.2.16 +Django==4.2.17 django-admin-list-filter-dropdown==1.0.3 django-admin-rangefilter==0.13.2 django-autocomplete-light==3.11.0 @@ -33,7 +33,7 @@ docopt==0.6.2 docutils==0.20.1 drfdocs==0.0.11 flake8==7.1.1 -fonttools==4.55.0 +fonttools==4.55.3 globus-cli==3.32.0 globus-sdk==3.46.0 iblutil==1.14.0 @@ -41,7 +41,7 @@ idna==3.10 importlib_metadata==8.5.0 importlib_resources==6.4.5 itypes==1.2.0 -Jinja2==3.1.4 +Jinja2==3.1.5 jmespath==1.0.1 kiwisolver==1.4.7 llvmlite==0.41.1 @@ -52,7 +52,7 @@ matplotlib==3.7.5 mccabe==0.7.0 numba==0.58.1 numpy==1.24.4 -ONE-api==2.11.1 +ONE-api==2.11.2 packaging==24.2 pandas==2.0.3 pillow==10.4.0 @@ -70,8 +70,8 @@ pytz==2024.2 PyYAML==6.0.2 requests==2.32.3 s3transfer==0.10.4 -six==1.16.0 -sqlparse==0.5.2 +six==1.17.0 +sqlparse==0.5.3 structlog==24.4.0 tomli==2.2.1 tqdm==4.67.1