From 31d364573e0660355b2e6618535aa0c4c47738ed Mon Sep 17 00:00:00 2001 From: "Matthew R. Becker" Date: Mon, 13 Feb 2017 16:43:32 -0600 Subject: [PATCH] BUG fix package versions to avoid installing MKL (#9) * BUG make sure conda env is consistent wrt use of MKL * ENH pin conda to 4.1.11 * DOC updated release date --- CHANGELOG.md | 7 ++++--- Dockerfile | 3 ++- environment.yml | 6 +++--- 3 files changed, 9 insertions(+), 7 deletions(-) diff --git a/CHANGELOG.md b/CHANGELOG.md index 98bc293..8d3ebd7 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -7,10 +7,12 @@ Version number changes (major.minor.micro) in this package denote the following: - A minor version will increase if one or more packages contained in the Docker image add new, backwards-compatible features, or if a new package is added to the Docker image. - A major version will increase if there are any backwards-incompatible changes in any of the packages contained in this Docker image, or any other backwards-incompabile changes in the execution environment. -## [1.1.0] - 2017-02-10 +## [1.1.0] - 2017-02-13 ### Changed - Add environment variables which record the image version number (#1) -- Upgraded civis library from v1.1.0 to v1.2.0 +- Upgraded civis library from v1.1.0 to v1.2.0 (#5) +- Various changes to packages to avoid installing MKL (#9) +- Pinned conda to 4.1.11 (#9) ### Fixed - Changed location of `matplotlibrc` to always be found (#6) @@ -20,4 +22,3 @@ Version number changes (major.minor.micro) in this package denote the following: ## [1.0.0] - 2017-01-17 * Initial Release - diff --git a/Dockerfile b/Dockerfile index cda0a5b..0cb7cfd 100644 --- a/Dockerfile +++ b/Dockerfile @@ -33,7 +33,8 @@ RUN echo 'export PATH=/opt/conda/bin:$PATH' > /etc/profile.d/conda.sh && \ wget --quiet https://repo.continuum.io/miniconda/Miniconda3-4.1.11-Linux-x86_64.sh && \ /bin/bash /Miniconda3-4.1.11-Linux-x86_64.sh -b -p /opt/conda && \ rm Miniconda3-4.1.11-Linux-x86_64.sh && \ - /opt/conda/bin/conda install --yes conda==4.1.11 + /opt/conda/bin/conda install --yes conda==4.1.11 && \ + echo "conda ==4.1.11" > /opt/conda/conda-meta/pinned # environment for bash RUN echo "source activate datascience" >> /etc/profile && \ diff --git a/environment.yml b/environment.yml index b0bf1b5..5d4fa89 100644 --- a/environment.yml +++ b/environment.yml @@ -1,6 +1,7 @@ name: datascience dependencies: - beautifulsoup4=4.5.1 +- boto=2.43.0 - cython=0.25.1 - ipython=5.1.0 - jsonschema=2.5.1 @@ -17,8 +18,8 @@ dependencies: - nose=1.3.7 - nltk=3.2.1 - numexpr=2.6.1 -- numpy=1.11.2 -- openblas=0.2.14 +- numpy=1.11.3 +- openblas=0.2.19 - pandas=0.19.1 - patsy=0.4.1 - psycopg2=2.6.2 @@ -33,7 +34,6 @@ dependencies: - statsmodels=0.6.1 - pip: - awscli==1.11.27 - - boto==2.43.0 - boto3==1.4.2 - civis==1.2.0 - dropbox==7.1.1