From d4f094c76d35c5687184a85ab53e1782379fbc5a Mon Sep 17 00:00:00 2001 From: Ryan Lim Date: Fri, 7 Jun 2024 17:12:11 +0000 Subject: [PATCH] remove-taxid-fasta-outputs --- workflows/short-read-mngs/experimental.wdl | 13 ------------- 1 file changed, 13 deletions(-) diff --git a/workflows/short-read-mngs/experimental.wdl b/workflows/short-read-mngs/experimental.wdl index 771a79672..5fe5e5cd0 100644 --- a/workflows/short-read-mngs/experimental.wdl +++ b/workflows/short-read-mngs/experimental.wdl @@ -278,19 +278,6 @@ workflow czid_experimental { output { File taxid_fasta_out_taxid_annot_fasta = GenerateTaxidFasta.taxid_annot_fasta File? taxid_fasta_out_count = GenerateTaxidFasta.output_read_count - File taxid_locator_out_taxid_annot_sorted_nt_fasta = GenerateTaxidLocator.taxid_annot_sorted_nt_fasta - File taxid_locator_out_taxid_locations_nt_json = GenerateTaxidLocator.taxid_locations_nt_json - File taxid_locator_out_taxid_annot_sorted_nr_fasta = GenerateTaxidLocator.taxid_annot_sorted_nr_fasta - File taxid_locator_out_taxid_locations_nr_json = GenerateTaxidLocator.taxid_locations_nr_json - File taxid_locator_out_taxid_annot_sorted_genus_nt_fasta = GenerateTaxidLocator.taxid_annot_sorted_genus_nt_fasta - File taxid_locator_out_taxid_locations_genus_nt_json = GenerateTaxidLocator.taxid_locations_genus_nt_json - File taxid_locator_out_taxid_annot_sorted_genus_nr_fasta = GenerateTaxidLocator.taxid_annot_sorted_genus_nr_fasta - File taxid_locator_out_taxid_locations_genus_nr_json = GenerateTaxidLocator.taxid_locations_genus_nr_json - File taxid_locator_out_taxid_annot_sorted_family_nt_fasta = GenerateTaxidLocator.taxid_annot_sorted_family_nt_fasta - File taxid_locator_out_taxid_locations_family_nt_json = GenerateTaxidLocator.taxid_locations_family_nt_json - File taxid_locator_out_taxid_annot_sorted_family_nr_fasta = GenerateTaxidLocator.taxid_annot_sorted_family_nr_fasta - File taxid_locator_out_taxid_locations_family_nr_json = GenerateTaxidLocator.taxid_locations_family_nr_json - File taxid_locator_out_taxid_locations_combined_json = GenerateTaxidLocator.taxid_locations_combined_json File? taxid_locator_out_count = GenerateTaxidLocator.output_read_count File alignment_viz_out_align_viz_summary = GenerateAlignmentViz.align_viz_summary File? alignment_viz_out_count = GenerateAlignmentViz.output_read_count