diff --git a/scripts/extract_indiv_labels.sh b/scripts/extract_indiv_labels.sh index 8357bf8..1442114 100755 --- a/scripts/extract_indiv_labels.sh +++ b/scripts/extract_indiv_labels.sh @@ -14,9 +14,8 @@ for subj in `cd ${SUBJECTS_DIR}; ls -d 0* 1* 2* 3* 4*`; do echo "working on parc ${parc}" for hemi in lh rh; do - mkdir -pv ${OUTDIR}/${subj}/${parc} - mri_annotation2label --subject ${subj} --hemi ${hemi} --outdir ${OUTDIR}/${subj}/${parc} \ - --labelbase ${hemi}_${parc}_label + mkdir -pv ${OUTDIR}/${subj}/${parc}_${hemi} + mri_annotation2label --subject ${subj} --hemi ${hemi} --outdir ${OUTDIR}/${subj}/${parc}_${hemi} \ done done