diff --git a/website/docs/modules/gather_batch_evidence.md b/website/docs/modules/gather_batch_evidence.md index 7d82ae766..b88a255c7 100644 --- a/website/docs/modules/gather_batch_evidence.md +++ b/website/docs/modules/gather_batch_evidence.md @@ -181,14 +181,16 @@ latest images from [this file](https://github.com/broadinstitute/gatk-sv/blob/ma #### Static inputs -```json -"primary_contigs_fai": "gs://gcp-public-data--broad-references/hg38/v0/sv-resources/resources/v1/contig.fai", -"cytoband": "gs://gcp-public-data--broad-references/hg38/v0/sv-resources/resources/v1/cytobands_hg38.bed.gz", -"ref_dict": "gs://gcp-public-data--broad-references/hg38/v0/Homo_sapiens_assembly38.dict", -"mei_bed": "gs://gcp-public-data--broad-references/hg38/v0/sv-resources/resources/v1/mei_hg38.bed.gz", -"genome_file": "gs://gcp-public-data--broad-references/hg38/v0/sv-resources/resources/v1/hg38.genome", -"sd_locs_vcf": "gs://gcp-public-data--broad-references/hg38/v0/Homo_sapiens_assembly38.dbsnp138.vcf" -``` +You may refer to [this reference file](https://github.com/broadinstitute/gatk-sv/blob/main/inputs/values/resources_hg38.json) +for values of the following inputs. + + - `primary_contigs_fai`; + - `cytoband`; + - `ref_dict`; + - `mei_bed`; + - `genome_file`; + - `sd_locs_vcf`. + #### Optional Inputs The following is the list of a few optional inputs of the