diff --git a/.github/.dockstore.yml b/.github/.dockstore.yml
index 970eff926..035d1cc84 100644
--- a/.github/.dockstore.yml
+++ b/.github/.dockstore.yml
@@ -195,7 +195,6 @@ workflows:
     filters:
       branches:
         - main
-        - eph_disable_func_anno
       tags:
         - /.*/
 
diff --git a/wdl/AnnotateVcf.wdl b/wdl/AnnotateVcf.wdl
index 74494fb09..553ad3c69 100644
--- a/wdl/AnnotateVcf.wdl
+++ b/wdl/AnnotateVcf.wdl
@@ -12,7 +12,7 @@ workflow AnnotateVcf {
     File contig_list  # Ordered list of contigs to annotate that are present in the input VCF
     String prefix
 
-    File? protein_coding_gtf
+    File? protein_coding_gtf  # Provide at least one of protein_coding_gtf or noncoding_bed to perform functional annotation
     File? noncoding_bed
     Int? promoter_window
     Int? max_breakend_as_cnv_length