diff --git a/EDAM_ID/index.html b/EDAM_ID/index.html deleted file mode 100644 index 76324f0..0000000 --- a/EDAM_ID/index.html +++ /dev/null @@ -1,440 +0,0 @@ - - - - - - - - - - - - - - - - - - Slot: EDAM_ID - standards-schema - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
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URI: STANDARDS:EDAM_ID

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NameDescription
DataTopicRepresents a general data topic for Bridge2AI data or the tools/standards app...
DataSubstrateRepresents a data substrate for Bridge2AI data
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edam.data:0006
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-examples:
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-from_schema: https://w3id.org/bridge2ai/standards-schema
-rank: 1000
-values_from:
-- edam.data
-- edam.format
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-alias: EDAM_ID
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MeSH:D014831
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MeSH:D014831
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NCIT:C92692
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OrganizationRepresents a group or organization related to or responsible for one or more ...
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ROR:02mp31p96
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OrganizationRepresents a group or organization related to or responsible for one or more ...
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https://www.zeiss.com/
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OrganizationRepresents a group or organization related to or responsible for one or more ...
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WIKIDATA:Q282186
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-- value: WIKIDATA:Q282186
-from_schema: https://w3id.org/bridge2ai/standards-organization-schema
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-- WIKIDATA
-alias: Wikidata_ID
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Slots

Collection of associated use cases +use_conditions +Applicable conditions on use, as defined by the Data Use Ontology (DUO) + + wikidata_id Unique Wikidata identifier diff --git a/node_property/index.html b/node_property/index.html index 369902a..5503dde 100644 --- a/node_property/index.html +++ b/node_property/index.html @@ -335,6 +335,7 @@

Inheritance

  • collection
  • purpose_detail
  • is_open
    • +
  • use_conditions
  • requires_registration
  • publication
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    • diff --git a/search/search_index.json b/search/search_index.json index 934ee79..85d0a5d 100644 --- a/search/search_index.json +++ b/search/search_index.json @@ -1 +1 @@ -{"config":{"indexing":"full","lang":["en"],"min_search_length":3,"prebuild_index":false,"separator":"[\\s\\-]+"},"docs":[{"location":"","text":"standards-schema-all High-level classes for Bridge2AI Standards schemas. URI: https://w3id.org/bridge2ai/standards-schema-all Name: standards-schema-all Classes Class Description AnatomicalEntity A subcellular location, cell type or gross anatomical part BiomedicalStandard Represents a standard in the Bridge2AI Standards Registry with particular app... DataStandard Represents a general purpose standard in the Bridge2AI Standards Registry DataStandardOrTool Represents a standard or tool in the Bridge2AI Standards Registry DataStandardOrToolContainer A container for DataStandardOrTool(s) DataSubstrate Represents a data substrate for Bridge2AI data DataSubstrateContainer A container for DataSubstrates DataTopic Represents a general data topic for Bridge2AI data or the tools/standards app... DataTopicContainer A container for DataTopics ModelRepository Represents a resource in the Bridge2AI Standards Registry serving to curate a... NamedThing A generic grouping for any identifiable entity OntologyOrVocabulary A set of concepts and categories, potentially defined or accompanied by their... Organization Represents a group or organization related to or responsible for one or more ... OrganizationContainer A container for Organizations ReferenceDataOrDataset Represents a resource in the Bridge2AI Standards Registry serving as a standa... ReferenceImplementation Represents an implementation of one or more standards or tools in the Bridge2... Registry Represents a resource in the Bridge2AI Standards Registry serving to curate a... SoftwareOrTool Represents a piece of software or computational tool in the Bridge2AI Standar... TrainingProgram Represents a training program for skills and experience related to standards ... UseCase Represents a use case for Bridge2AI standards UseCaseContainer A container for UseCase Slots Slot Description alternative_standards_and_tools List of identifiers of standards and tools; those not explicitly planned to b... category Name of the high level ontology class in which this entity is categorized collection Tags for specific sets of standards concerns_data_topic Subject standard is generally applied in the context of object data topic contribution_date The date on which the node was added contributor_github_name The name of the github user who added this node contributor_name The name of the person who added this node contributor_orcid The ORCiD of the person who added this node data_standardortools_collection Collection of associated data standards or tools data_substrates Relevance of the use case to one or more data substrates data_substrates_collection Collection of associated data substrates data_topics Relevance of the use case to one or more data topics data_topics_collection Collection of associated data topics description A human-readable description for a thing edam_id Unique EDAM identifier enables Other use case(s) this use case supports or makes possible file_extensions Commonly used file extensions for this substrate formal_specification Relevant code repository or other location for a formal specification of the ... has_relevant_organization Subject standard is managed or otherwise guided buy the object organization(s... id A unique identifier for a thing involved_in_experimental_design True if use case is likely to be implemented as part of an experimental proce... involved_in_metadata_management True if use case is likely to be implemented as part of metadata indexing, sa... involved_in_quality_control True is use case is likely to be implemented as part of data validation opera... is_open Is the standard or tool FAIR and available free of cost? known_limitations Any current obstacles to implementing this use case limitations Potential obstacles particular to this substrate or implementation mesh_id Unique MeSH identifier metadata_storage Data Substrate in which metadata is stored name A human-readable name for a thing ncit_id Unique NCIt Identifier node_property A grouping for any property that holds between a node and a value not_relevant_to_dgps Is the standard or tool currently relevant to DGPs? organizations Collection of associated organizations publication Relevant publication for the standard or tool purpose_detail Text description of the standard or tool related_to A relationship that is asserted between two named things relevance_to_dgps Relevance of the use case to one or more DGPs requires_registration Does usage of the standard or tool require registrion of a user or group with... ror_id Unique ROR identifier standards_and_tools_for_dgp_use List of identifiers of standards and tools; those planned to be used, or alre... subclass_of Holds between two classes where the domain class is a specialization of the r... topic_involves_anatomy A relationship between a DataTopic and an anatomical entity type A generic slot for any label corresponding to the label for an entity type a... url URL for basic documentation of the standard or tool use_case_category Category of the UseCase use_cases Collection of associated use cases wikidata_id Unique Wikidata identifier xref URI of corresponding class in an ontology of experimental procedures, in CURI... Enumerations Enumeration Description DataGeneratingProject One of the Bridge2AI Data Generating Projects StandardsCollectionTag Tags for specific sets of standards UseCaseCategory Category of use case Types Type Description Boolean A binary (true or false) value CategoryType A primitive type in which the value denotes a class within the model Curie a compact URI Date a date (year, month and day) in an idealized calendar DateOrDatetime Either a date or a datetime Datetime The combination of a date and time Decimal A real number with arbitrary precision that conforms to the xsd:decimal speci... Double A real number that conforms to the xsd:double specification EdamIdentifier Identifier from EDAM ontology Float A real number that conforms to the xsd:float specification Integer An integer MeshIdentifier Identifier from Medical Subject Headings (MeSH) biomedical vocabulary NcitIdentifier Identifier from NCIT reference terminology with broad coverage of the cancer ... Ncname Prefix part of CURIE Nodeidentifier A URI, CURIE or BNODE that represents a node in a model Objectidentifier A URI or CURIE that represents an object in the model RorIdentifier Identifier from Research Organization Registry String A character string Time A time object represents a (local) time of day, independent of any particular... Uri a complete URI Uriorcurie a URI or a CURIE WikidataIdentifier Identifier from Wikidata open knowledge base Subsets Subset Description","title":"Index"},{"location":"#standards-schema-all","text":"High-level classes for Bridge2AI Standards schemas. URI: https://w3id.org/bridge2ai/standards-schema-all Name: standards-schema-all","title":"standards-schema-all"},{"location":"#classes","text":"Class Description AnatomicalEntity A subcellular location, cell type or gross anatomical part BiomedicalStandard Represents a standard in the Bridge2AI Standards Registry with particular app... DataStandard Represents a general purpose standard in the Bridge2AI Standards Registry DataStandardOrTool Represents a standard or tool in the Bridge2AI Standards Registry DataStandardOrToolContainer A container for DataStandardOrTool(s) DataSubstrate Represents a data substrate for Bridge2AI data DataSubstrateContainer A container for DataSubstrates DataTopic Represents a general data topic for Bridge2AI data or the tools/standards app... DataTopicContainer A container for DataTopics ModelRepository Represents a resource in the Bridge2AI Standards Registry serving to curate a... NamedThing A generic grouping for any identifiable entity OntologyOrVocabulary A set of concepts and categories, potentially defined or accompanied by their... Organization Represents a group or organization related to or responsible for one or more ... OrganizationContainer A container for Organizations ReferenceDataOrDataset Represents a resource in the Bridge2AI Standards Registry serving as a standa... ReferenceImplementation Represents an implementation of one or more standards or tools in the Bridge2... Registry Represents a resource in the Bridge2AI Standards Registry serving to curate a... SoftwareOrTool Represents a piece of software or computational tool in the Bridge2AI Standar... TrainingProgram Represents a training program for skills and experience related to standards ... UseCase Represents a use case for Bridge2AI standards UseCaseContainer A container for UseCase","title":"Classes"},{"location":"#slots","text":"Slot Description alternative_standards_and_tools List of identifiers of standards and tools; those not explicitly planned to b... category Name of the high level ontology class in which this entity is categorized collection Tags for specific sets of standards concerns_data_topic Subject standard is generally applied in the context of object data topic contribution_date The date on which the node was added contributor_github_name The name of the github user who added this node contributor_name The name of the person who added this node contributor_orcid The ORCiD of the person who added this node data_standardortools_collection Collection of associated data standards or tools data_substrates Relevance of the use case to one or more data substrates data_substrates_collection Collection of associated data substrates data_topics Relevance of the use case to one or more data topics data_topics_collection Collection of associated data topics description A human-readable description for a thing edam_id Unique EDAM identifier enables Other use case(s) this use case supports or makes possible file_extensions Commonly used file extensions for this substrate formal_specification Relevant code repository or other location for a formal specification of the ... has_relevant_organization Subject standard is managed or otherwise guided buy the object organization(s... id A unique identifier for a thing involved_in_experimental_design True if use case is likely to be implemented as part of an experimental proce... involved_in_metadata_management True if use case is likely to be implemented as part of metadata indexing, sa... involved_in_quality_control True is use case is likely to be implemented as part of data validation opera... is_open Is the standard or tool FAIR and available free of cost? known_limitations Any current obstacles to implementing this use case limitations Potential obstacles particular to this substrate or implementation mesh_id Unique MeSH identifier metadata_storage Data Substrate in which metadata is stored name A human-readable name for a thing ncit_id Unique NCIt Identifier node_property A grouping for any property that holds between a node and a value not_relevant_to_dgps Is the standard or tool currently relevant to DGPs? organizations Collection of associated organizations publication Relevant publication for the standard or tool purpose_detail Text description of the standard or tool related_to A relationship that is asserted between two named things relevance_to_dgps Relevance of the use case to one or more DGPs requires_registration Does usage of the standard or tool require registrion of a user or group with... ror_id Unique ROR identifier standards_and_tools_for_dgp_use List of identifiers of standards and tools; those planned to be used, or alre... subclass_of Holds between two classes where the domain class is a specialization of the r... topic_involves_anatomy A relationship between a DataTopic and an anatomical entity type A generic slot for any label corresponding to the label for an entity type a... url URL for basic documentation of the standard or tool use_case_category Category of the UseCase use_cases Collection of associated use cases wikidata_id Unique Wikidata identifier xref URI of corresponding class in an ontology of experimental procedures, in CURI...","title":"Slots"},{"location":"#enumerations","text":"Enumeration Description DataGeneratingProject One of the Bridge2AI Data Generating Projects StandardsCollectionTag Tags for specific sets of standards UseCaseCategory Category of use case","title":"Enumerations"},{"location":"#types","text":"Type Description Boolean A binary (true or false) value CategoryType A primitive type in which the value denotes a class within the model Curie a compact URI Date a date (year, month and day) in an idealized calendar DateOrDatetime Either a date or a datetime Datetime The combination of a date and time Decimal A real number with arbitrary precision that conforms to the xsd:decimal speci... Double A real number that conforms to the xsd:double specification EdamIdentifier Identifier from EDAM ontology Float A real number that conforms to the xsd:float specification Integer An integer MeshIdentifier Identifier from Medical Subject Headings (MeSH) biomedical vocabulary NcitIdentifier Identifier from NCIT reference terminology with broad coverage of the cancer ... Ncname Prefix part of CURIE Nodeidentifier A URI, CURIE or BNODE that represents a node in a model Objectidentifier A URI or CURIE that represents an object in the model RorIdentifier Identifier from Research Organization Registry String A character string Time A time object represents a (local) time of day, independent of any particular... Uri a complete URI Uriorcurie a URI or a CURIE WikidataIdentifier Identifier from Wikidata open knowledge base","title":"Types"},{"location":"#subsets","text":"Subset Description","title":"Subsets"},{"location":"AnatomicalEntity/","text":"Class: AnatomicalEntity A subcellular location, cell type or gross anatomical part URI: https://w3id.org/bridge2ai/standards-schema-all/:AnatomicalEntity classDiagram class AnatomicalEntity NamedThing <|-- AnatomicalEntity AnatomicalEntity : category AnatomicalEntity : contribution_date AnatomicalEntity : contributor_github_name AnatomicalEntity : contributor_name AnatomicalEntity : contributor_orcid AnatomicalEntity : description AnatomicalEntity : id AnatomicalEntity : name AnatomicalEntity : related_to AnatomicalEntity ..> NamedThing : related_to AnatomicalEntity : subclass_of AnatomicalEntity ..> NamedThing : subclass_of Inheritance NamedThing AnatomicalEntity Slots Name Cardinality and Range Description Inheritance id 1..1 Uriorcurie A unique identifier for a thing NamedThing category 0..1 CategoryType Name of the high level ontology class in which this entity is categorized NamedThing name 0..1 String A human-readable name for a thing NamedThing description 0..1 String A human-readable description for a thing NamedThing subclass_of 0..* NamedThing Holds between two classes where the domain class is a specialization of the r... NamedThing related_to 0..* NamedThing A relationship that is asserted between two named things NamedThing contributor_name 0..1 String The name of the person who added this node NamedThing contributor_github_name 0..1 String The name of the github user who added this node NamedThing contributor_orcid 0..1 Uriorcurie The ORCiD of the person who added this node NamedThing contribution_date 0..1 Date The date on which the node was added NamedThing Usages used by used in type used DataTopic topic_involves_anatomy range AnatomicalEntity Identifier and Mapping Information Valid ID Prefixes Instances of this class should have identifiers with one of the following prefixes: uberon Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all Mappings Mapping Type Mapped Value self https://w3id.org/bridge2ai/standards-schema-all/:AnatomicalEntity native https://w3id.org/bridge2ai/standards-schema-all/:AnatomicalEntity exact uberon:0001062, wikidata:Q4936952 narrow ncit:C12219 LinkML Source Direct name: AnatomicalEntity id_prefixes: - uberon description: A subcellular location, cell type or gross anatomical part from_schema: https://w3id.org/bridge2ai/standards-schema-all exact_mappings: - uberon:0001062 - wikidata:Q4936952 narrow_mappings: - ncit:C12219 rank: 1000 is_a: NamedThing Induced name: AnatomicalEntity id_prefixes: - uberon description: A subcellular location, cell type or gross anatomical part from_schema: https://w3id.org/bridge2ai/standards-schema-all exact_mappings: - uberon:0001062 - wikidata:Q4936952 narrow_mappings: - ncit:C12219 rank: 1000 is_a: NamedThing attributes: id: name: id description: A unique identifier for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:identifier identifier: true alias: id owner: AnatomicalEntity domain_of: - NamedThing range: uriorcurie required: true category: name: category description: Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\". from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: type domain: NamedThing designates_type: true alias: category owner: AnatomicalEntity domain_of: - NamedThing range: category_type name: name: name description: A human-readable name for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:name alias: name owner: AnatomicalEntity domain_of: - NamedThing range: string description: name: description description: A human-readable description for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:description alias: description owner: AnatomicalEntity domain_of: - NamedThing range: string subclass_of: name: subclass_of description: Holds between two classes where the domain class is a specialization of the range class. from_schema: https://w3id.org/bridge2ai/standards-schema-all exact_mappings: - rdfs:subClassOf - MESH:isa narrow_mappings: - rdfs:subPropertyOf rank: 1000 is_a: related_to domain: NamedThing multivalued: true inherited: true alias: subclass_of owner: AnatomicalEntity domain_of: - NamedThing range: NamedThing related_to: name: related_to description: A relationship that is asserted between two named things. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 domain: NamedThing multivalued: true inherited: true alias: related_to owner: AnatomicalEntity domain_of: - NamedThing - Organization symmetric: true range: NamedThing contributor_name: name: contributor_name description: The name of the person who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_name owner: AnatomicalEntity domain_of: - NamedThing range: string contributor_github_name: name: contributor_github_name description: The name of the github user who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_github_name owner: AnatomicalEntity domain_of: - NamedThing range: string contributor_orcid: name: contributor_orcid description: The ORCiD of the person who added this node. examples: - value: ORCID:0000-0001-1234-5678 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_orcid owner: AnatomicalEntity domain_of: - NamedThing range: uriorcurie contribution_date: name: contribution_date description: The date on which the node was added. examples: - value: '2023-03-20' from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contribution_date owner: AnatomicalEntity domain_of: - NamedThing range: date","title":"Class: AnatomicalEntity"},{"location":"AnatomicalEntity/#class-anatomicalentity","text":"A subcellular location, cell type or gross anatomical part URI: https://w3id.org/bridge2ai/standards-schema-all/:AnatomicalEntity classDiagram class AnatomicalEntity NamedThing <|-- AnatomicalEntity AnatomicalEntity : category AnatomicalEntity : contribution_date AnatomicalEntity : contributor_github_name AnatomicalEntity : contributor_name AnatomicalEntity : contributor_orcid AnatomicalEntity : description AnatomicalEntity : id AnatomicalEntity : name AnatomicalEntity : related_to AnatomicalEntity ..> NamedThing : related_to AnatomicalEntity : subclass_of AnatomicalEntity ..> NamedThing : subclass_of","title":"Class: AnatomicalEntity"},{"location":"AnatomicalEntity/#inheritance","text":"NamedThing AnatomicalEntity","title":"Inheritance"},{"location":"AnatomicalEntity/#slots","text":"Name Cardinality and Range Description Inheritance id 1..1 Uriorcurie A unique identifier for a thing NamedThing category 0..1 CategoryType Name of the high level ontology class in which this entity is categorized NamedThing name 0..1 String A human-readable name for a thing NamedThing description 0..1 String A human-readable description for a thing NamedThing subclass_of 0..* NamedThing Holds between two classes where the domain class is a specialization of the r... NamedThing related_to 0..* NamedThing A relationship that is asserted between two named things NamedThing contributor_name 0..1 String The name of the person who added this node NamedThing contributor_github_name 0..1 String The name of the github user who added this node NamedThing contributor_orcid 0..1 Uriorcurie The ORCiD of the person who added this node NamedThing contribution_date 0..1 Date The date on which the node was added NamedThing","title":"Slots"},{"location":"AnatomicalEntity/#usages","text":"used by used in type used DataTopic topic_involves_anatomy range AnatomicalEntity","title":"Usages"},{"location":"AnatomicalEntity/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"AnatomicalEntity/#valid-id-prefixes","text":"Instances of this class should have identifiers with one of the following prefixes: uberon","title":"Valid ID Prefixes"},{"location":"AnatomicalEntity/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"AnatomicalEntity/#mappings","text":"Mapping Type Mapped Value self https://w3id.org/bridge2ai/standards-schema-all/:AnatomicalEntity native https://w3id.org/bridge2ai/standards-schema-all/:AnatomicalEntity exact uberon:0001062, wikidata:Q4936952 narrow ncit:C12219","title":"Mappings"},{"location":"AnatomicalEntity/#linkml-source","text":"","title":"LinkML Source"},{"location":"AnatomicalEntity/#direct","text":"name: AnatomicalEntity id_prefixes: - uberon description: A subcellular location, cell type or gross anatomical part from_schema: https://w3id.org/bridge2ai/standards-schema-all exact_mappings: - uberon:0001062 - wikidata:Q4936952 narrow_mappings: - ncit:C12219 rank: 1000 is_a: NamedThing","title":"Direct"},{"location":"AnatomicalEntity/#induced","text":"name: AnatomicalEntity id_prefixes: - uberon description: A subcellular location, cell type or gross anatomical part from_schema: https://w3id.org/bridge2ai/standards-schema-all exact_mappings: - uberon:0001062 - wikidata:Q4936952 narrow_mappings: - ncit:C12219 rank: 1000 is_a: NamedThing attributes: id: name: id description: A unique identifier for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:identifier identifier: true alias: id owner: AnatomicalEntity domain_of: - NamedThing range: uriorcurie required: true category: name: category description: Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\". from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: type domain: NamedThing designates_type: true alias: category owner: AnatomicalEntity domain_of: - NamedThing range: category_type name: name: name description: A human-readable name for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:name alias: name owner: AnatomicalEntity domain_of: - NamedThing range: string description: name: description description: A human-readable description for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:description alias: description owner: AnatomicalEntity domain_of: - NamedThing range: string subclass_of: name: subclass_of description: Holds between two classes where the domain class is a specialization of the range class. from_schema: https://w3id.org/bridge2ai/standards-schema-all exact_mappings: - rdfs:subClassOf - MESH:isa narrow_mappings: - rdfs:subPropertyOf rank: 1000 is_a: related_to domain: NamedThing multivalued: true inherited: true alias: subclass_of owner: AnatomicalEntity domain_of: - NamedThing range: NamedThing related_to: name: related_to description: A relationship that is asserted between two named things. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 domain: NamedThing multivalued: true inherited: true alias: related_to owner: AnatomicalEntity domain_of: - NamedThing - Organization symmetric: true range: NamedThing contributor_name: name: contributor_name description: The name of the person who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_name owner: AnatomicalEntity domain_of: - NamedThing range: string contributor_github_name: name: contributor_github_name description: The name of the github user who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_github_name owner: AnatomicalEntity domain_of: - NamedThing range: string contributor_orcid: name: contributor_orcid description: The ORCiD of the person who added this node. examples: - value: ORCID:0000-0001-1234-5678 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_orcid owner: AnatomicalEntity domain_of: - NamedThing range: uriorcurie contribution_date: name: contribution_date description: The date on which the node was added. examples: - value: '2023-03-20' from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contribution_date owner: AnatomicalEntity domain_of: - NamedThing range: date","title":"Induced"},{"location":"BiomedicalStandard/","text":"Class: BiomedicalStandard Represents a standard in the Bridge2AI Standards Registry with particular applications or relevance to clinical or biomedical research purposes. URI: https://w3id.org/bridge2ai/standards-schema-all/:BiomedicalStandard classDiagram class BiomedicalStandard DataStandard <|-- BiomedicalStandard BiomedicalStandard : category BiomedicalStandard : collection BiomedicalStandard ..> StandardsCollectionTag : collection BiomedicalStandard : concerns_data_topic BiomedicalStandard ..> DataTopic : concerns_data_topic BiomedicalStandard : contribution_date BiomedicalStandard : contributor_github_name BiomedicalStandard : contributor_name BiomedicalStandard : contributor_orcid BiomedicalStandard : description BiomedicalStandard : formal_specification BiomedicalStandard : has_relevant_organization BiomedicalStandard ..> Organization : has_relevant_organization BiomedicalStandard : id BiomedicalStandard : is_open BiomedicalStandard : name BiomedicalStandard : not_relevant_to_dgps BiomedicalStandard : publication BiomedicalStandard : purpose_detail BiomedicalStandard : related_to BiomedicalStandard ..> NamedThing : related_to BiomedicalStandard : requires_registration BiomedicalStandard : subclass_of BiomedicalStandard ..> NamedThing : subclass_of BiomedicalStandard : url Inheritance NamedThing DataStandardOrTool DataStandard BiomedicalStandard Slots Name Cardinality and Range Description Inheritance collection 0..* StandardsCollectionTag Tags for specific sets of standards DataStandardOrTool concerns_data_topic 0..* DataTopic Subject standard is generally applied in the context of object data topic DataStandardOrTool has_relevant_organization 0..* Organization Subject standard is managed or otherwise guided buy the object organization(s... DataStandardOrTool purpose_detail 0..1 String Text description of the standard or tool DataStandardOrTool is_open 0..1 Boolean Is the standard or tool FAIR and available free of cost? DataStandardOrTool requires_registration 0..1 Boolean Does usage of the standard or tool require registrion of a user or group with... DataStandardOrTool url 0..1 Uriorcurie URL for basic documentation of the standard or tool DataStandardOrTool publication 0..1 Uriorcurie Relevant publication for the standard or tool DataStandardOrTool formal_specification 0..1 Uriorcurie Relevant code repository or other location for a formal specification of the ... DataStandardOrTool not_relevant_to_dgps 0..1 Boolean Is the standard or tool currently relevant to DGPs? DataStandardOrTool id 1..1 Uriorcurie A unique identifier for a thing NamedThing category 0..1 CategoryType Name of the high level ontology class in which this entity is categorized NamedThing name 0..1 String A human-readable name for a thing NamedThing description 0..1 String A human-readable description for a thing NamedThing subclass_of 0..* NamedThing Holds between two classes where the domain class is a specialization of the r... NamedThing related_to 0..* NamedThing A relationship that is asserted between two named things NamedThing contributor_name 0..1 String The name of the person who added this node NamedThing contributor_github_name 0..1 String The name of the github user who added this node NamedThing contributor_orcid 0..1 Uriorcurie The ORCiD of the person who added this node NamedThing contribution_date 0..1 Date The date on which the node was added NamedThing Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all Mappings Mapping Type Mapped Value self https://w3id.org/bridge2ai/standards-schema-all/:BiomedicalStandard native https://w3id.org/bridge2ai/standards-schema-all/:BiomedicalStandard LinkML Source Direct name: BiomedicalStandard description: Represents a standard in the Bridge2AI Standards Registry with particular applications or relevance to clinical or biomedical research purposes. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: DataStandard Induced name: BiomedicalStandard description: Represents a standard in the Bridge2AI Standards Registry with particular applications or relevance to clinical or biomedical research purposes. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: DataStandard attributes: collection: name: collection description: Tags for specific sets of standards. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing multivalued: true alias: collection owner: BiomedicalStandard domain_of: - DataStandardOrTool range: StandardsCollectionTag concerns_data_topic: name: concerns_data_topic description: Subject standard is generally applied in the context of object data topic. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: related_to domain: DataStandardOrTool multivalued: true inherited: true alias: concerns_data_topic owner: BiomedicalStandard domain_of: - DataStandardOrTool range: DataTopic has_relevant_organization: name: has_relevant_organization description: Subject standard is managed or otherwise guided buy the object organization(s). from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: related_to domain: DataStandardOrTool multivalued: true inherited: true alias: has_relevant_organization owner: BiomedicalStandard domain_of: - DataStandardOrTool range: Organization purpose_detail: name: purpose_detail description: Text description of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: purpose_detail owner: BiomedicalStandard domain_of: - DataStandardOrTool range: string is_open: name: is_open description: Is the standard or tool FAIR and available free of cost? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: is_open owner: BiomedicalStandard domain_of: - DataStandardOrTool range: boolean requires_registration: name: requires_registration description: Does usage of the standard or tool require registrion of a user or group with some organization or managerial body? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: requires_registration owner: BiomedicalStandard domain_of: - DataStandardOrTool range: boolean url: name: url description: URL for basic documentation of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: url owner: BiomedicalStandard domain_of: - DataStandardOrTool - Organization range: uriorcurie publication: name: publication description: Relevant publication for the standard or tool. Prefer a DOI or PUBMED. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: publication owner: BiomedicalStandard domain_of: - DataStandardOrTool range: uriorcurie formal_specification: name: formal_specification description: Relevant code repository or other location for a formal specification of the standard or tool. Often a URL, particularly to a Git repository. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: formal_specification owner: BiomedicalStandard domain_of: - DataStandardOrTool range: uriorcurie not_relevant_to_dgps: name: not_relevant_to_dgps description: Is the standard or tool currently relevant to DGPs? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: not_relevant_to_dgps owner: BiomedicalStandard domain_of: - DataStandardOrTool range: boolean id: name: id description: A unique identifier for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:identifier identifier: true alias: id owner: BiomedicalStandard domain_of: - NamedThing range: uriorcurie required: true category: name: category description: Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\". from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: type domain: NamedThing designates_type: true alias: category owner: BiomedicalStandard domain_of: - NamedThing range: category_type name: name: name description: A human-readable name for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:name alias: name owner: BiomedicalStandard domain_of: - NamedThing range: string description: name: description description: A human-readable description for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:description alias: description owner: BiomedicalStandard domain_of: - NamedThing range: string subclass_of: name: subclass_of description: Holds between two classes where the domain class is a specialization of the range class. from_schema: https://w3id.org/bridge2ai/standards-schema-all exact_mappings: - rdfs:subClassOf - MESH:isa narrow_mappings: - rdfs:subPropertyOf rank: 1000 is_a: related_to domain: NamedThing multivalued: true inherited: true alias: subclass_of owner: BiomedicalStandard domain_of: - NamedThing range: NamedThing related_to: name: related_to description: A relationship that is asserted between two named things. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 domain: NamedThing multivalued: true inherited: true alias: related_to owner: BiomedicalStandard domain_of: - NamedThing - Organization symmetric: true range: NamedThing contributor_name: name: contributor_name description: The name of the person who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_name owner: BiomedicalStandard domain_of: - NamedThing range: string contributor_github_name: name: contributor_github_name description: The name of the github user who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_github_name owner: BiomedicalStandard domain_of: - NamedThing range: string contributor_orcid: name: contributor_orcid description: The ORCiD of the person who added this node. examples: - value: ORCID:0000-0001-1234-5678 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_orcid owner: BiomedicalStandard domain_of: - NamedThing range: uriorcurie contribution_date: name: contribution_date description: The date on which the node was added. examples: - value: '2023-03-20' from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contribution_date owner: BiomedicalStandard domain_of: - NamedThing range: date","title":"Class: BiomedicalStandard"},{"location":"BiomedicalStandard/#class-biomedicalstandard","text":"Represents a standard in the Bridge2AI Standards Registry with particular applications or relevance to clinical or biomedical research purposes. URI: https://w3id.org/bridge2ai/standards-schema-all/:BiomedicalStandard classDiagram class BiomedicalStandard DataStandard <|-- BiomedicalStandard BiomedicalStandard : category BiomedicalStandard : collection BiomedicalStandard ..> StandardsCollectionTag : collection BiomedicalStandard : concerns_data_topic BiomedicalStandard ..> DataTopic : concerns_data_topic BiomedicalStandard : contribution_date BiomedicalStandard : contributor_github_name BiomedicalStandard : contributor_name BiomedicalStandard : contributor_orcid BiomedicalStandard : description BiomedicalStandard : formal_specification BiomedicalStandard : has_relevant_organization BiomedicalStandard ..> Organization : has_relevant_organization BiomedicalStandard : id BiomedicalStandard : is_open BiomedicalStandard : name BiomedicalStandard : not_relevant_to_dgps BiomedicalStandard : publication BiomedicalStandard : purpose_detail BiomedicalStandard : related_to BiomedicalStandard ..> NamedThing : related_to BiomedicalStandard : requires_registration BiomedicalStandard : subclass_of BiomedicalStandard ..> NamedThing : subclass_of BiomedicalStandard : url","title":"Class: BiomedicalStandard"},{"location":"BiomedicalStandard/#inheritance","text":"NamedThing DataStandardOrTool DataStandard BiomedicalStandard","title":"Inheritance"},{"location":"BiomedicalStandard/#slots","text":"Name Cardinality and Range Description Inheritance collection 0..* StandardsCollectionTag Tags for specific sets of standards DataStandardOrTool concerns_data_topic 0..* DataTopic Subject standard is generally applied in the context of object data topic DataStandardOrTool has_relevant_organization 0..* Organization Subject standard is managed or otherwise guided buy the object organization(s... DataStandardOrTool purpose_detail 0..1 String Text description of the standard or tool DataStandardOrTool is_open 0..1 Boolean Is the standard or tool FAIR and available free of cost? DataStandardOrTool requires_registration 0..1 Boolean Does usage of the standard or tool require registrion of a user or group with... DataStandardOrTool url 0..1 Uriorcurie URL for basic documentation of the standard or tool DataStandardOrTool publication 0..1 Uriorcurie Relevant publication for the standard or tool DataStandardOrTool formal_specification 0..1 Uriorcurie Relevant code repository or other location for a formal specification of the ... DataStandardOrTool not_relevant_to_dgps 0..1 Boolean Is the standard or tool currently relevant to DGPs? DataStandardOrTool id 1..1 Uriorcurie A unique identifier for a thing NamedThing category 0..1 CategoryType Name of the high level ontology class in which this entity is categorized NamedThing name 0..1 String A human-readable name for a thing NamedThing description 0..1 String A human-readable description for a thing NamedThing subclass_of 0..* NamedThing Holds between two classes where the domain class is a specialization of the r... NamedThing related_to 0..* NamedThing A relationship that is asserted between two named things NamedThing contributor_name 0..1 String The name of the person who added this node NamedThing contributor_github_name 0..1 String The name of the github user who added this node NamedThing contributor_orcid 0..1 Uriorcurie The ORCiD of the person who added this node NamedThing contribution_date 0..1 Date The date on which the node was added NamedThing","title":"Slots"},{"location":"BiomedicalStandard/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"BiomedicalStandard/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"BiomedicalStandard/#mappings","text":"Mapping Type Mapped Value self https://w3id.org/bridge2ai/standards-schema-all/:BiomedicalStandard native https://w3id.org/bridge2ai/standards-schema-all/:BiomedicalStandard","title":"Mappings"},{"location":"BiomedicalStandard/#linkml-source","text":"","title":"LinkML Source"},{"location":"BiomedicalStandard/#direct","text":"name: BiomedicalStandard description: Represents a standard in the Bridge2AI Standards Registry with particular applications or relevance to clinical or biomedical research purposes. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: DataStandard","title":"Direct"},{"location":"BiomedicalStandard/#induced","text":"name: BiomedicalStandard description: Represents a standard in the Bridge2AI Standards Registry with particular applications or relevance to clinical or biomedical research purposes. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: DataStandard attributes: collection: name: collection description: Tags for specific sets of standards. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing multivalued: true alias: collection owner: BiomedicalStandard domain_of: - DataStandardOrTool range: StandardsCollectionTag concerns_data_topic: name: concerns_data_topic description: Subject standard is generally applied in the context of object data topic. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: related_to domain: DataStandardOrTool multivalued: true inherited: true alias: concerns_data_topic owner: BiomedicalStandard domain_of: - DataStandardOrTool range: DataTopic has_relevant_organization: name: has_relevant_organization description: Subject standard is managed or otherwise guided buy the object organization(s). from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: related_to domain: DataStandardOrTool multivalued: true inherited: true alias: has_relevant_organization owner: BiomedicalStandard domain_of: - DataStandardOrTool range: Organization purpose_detail: name: purpose_detail description: Text description of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: purpose_detail owner: BiomedicalStandard domain_of: - DataStandardOrTool range: string is_open: name: is_open description: Is the standard or tool FAIR and available free of cost? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: is_open owner: BiomedicalStandard domain_of: - DataStandardOrTool range: boolean requires_registration: name: requires_registration description: Does usage of the standard or tool require registrion of a user or group with some organization or managerial body? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: requires_registration owner: BiomedicalStandard domain_of: - DataStandardOrTool range: boolean url: name: url description: URL for basic documentation of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: url owner: BiomedicalStandard domain_of: - DataStandardOrTool - Organization range: uriorcurie publication: name: publication description: Relevant publication for the standard or tool. Prefer a DOI or PUBMED. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: publication owner: BiomedicalStandard domain_of: - DataStandardOrTool range: uriorcurie formal_specification: name: formal_specification description: Relevant code repository or other location for a formal specification of the standard or tool. Often a URL, particularly to a Git repository. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: formal_specification owner: BiomedicalStandard domain_of: - DataStandardOrTool range: uriorcurie not_relevant_to_dgps: name: not_relevant_to_dgps description: Is the standard or tool currently relevant to DGPs? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: not_relevant_to_dgps owner: BiomedicalStandard domain_of: - DataStandardOrTool range: boolean id: name: id description: A unique identifier for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:identifier identifier: true alias: id owner: BiomedicalStandard domain_of: - NamedThing range: uriorcurie required: true category: name: category description: Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\". from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: type domain: NamedThing designates_type: true alias: category owner: BiomedicalStandard domain_of: - NamedThing range: category_type name: name: name description: A human-readable name for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:name alias: name owner: BiomedicalStandard domain_of: - NamedThing range: string description: name: description description: A human-readable description for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:description alias: description owner: BiomedicalStandard domain_of: - NamedThing range: string subclass_of: name: subclass_of description: Holds between two classes where the domain class is a specialization of the range class. from_schema: https://w3id.org/bridge2ai/standards-schema-all exact_mappings: - rdfs:subClassOf - MESH:isa narrow_mappings: - rdfs:subPropertyOf rank: 1000 is_a: related_to domain: NamedThing multivalued: true inherited: true alias: subclass_of owner: BiomedicalStandard domain_of: - NamedThing range: NamedThing related_to: name: related_to description: A relationship that is asserted between two named things. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 domain: NamedThing multivalued: true inherited: true alias: related_to owner: BiomedicalStandard domain_of: - NamedThing - Organization symmetric: true range: NamedThing contributor_name: name: contributor_name description: The name of the person who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_name owner: BiomedicalStandard domain_of: - NamedThing range: string contributor_github_name: name: contributor_github_name description: The name of the github user who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_github_name owner: BiomedicalStandard domain_of: - NamedThing range: string contributor_orcid: name: contributor_orcid description: The ORCiD of the person who added this node. examples: - value: ORCID:0000-0001-1234-5678 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_orcid owner: BiomedicalStandard domain_of: - NamedThing range: uriorcurie contribution_date: name: contribution_date description: The date on which the node was added. examples: - value: '2023-03-20' from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contribution_date owner: BiomedicalStandard domain_of: - NamedThing range: date","title":"Induced"},{"location":"Boolean/","text":"Type: Boolean A binary (true or false) value URI: xsd:boolean base : Bool uri : xsd:boolean repr : bool Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Type: Boolean"},{"location":"Boolean/#type-boolean","text":"A binary (true or false) value URI: xsd:boolean base : Bool uri : xsd:boolean repr : bool","title":"Type: Boolean"},{"location":"Boolean/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Boolean/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"CategoryType/","text":"Type: CategoryType A primitive type in which the value denotes a class within the model. URI: xsd:anyURI base : URIorCURIE uri : xsd:anyURI repr : str typeof : uriorcurie Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Type: CategoryType"},{"location":"CategoryType/#type-categorytype","text":"A primitive type in which the value denotes a class within the model. URI: xsd:anyURI base : URIorCURIE uri : xsd:anyURI repr : str typeof : uriorcurie","title":"Type: CategoryType"},{"location":"CategoryType/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"CategoryType/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"Curie/","text":"Type: Curie a compact URI URI: xsd:string base : Curie uri : xsd:string repr : str Comments in RDF serializations this MUST be expanded to a URI in non-RDF serializations MAY be serialized as the compact representation Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Type: Curie"},{"location":"Curie/#type-curie","text":"a compact URI URI: xsd:string base : Curie uri : xsd:string repr : str","title":"Type: Curie"},{"location":"Curie/#comments","text":"in RDF serializations this MUST be expanded to a URI in non-RDF serializations MAY be serialized as the compact representation","title":"Comments"},{"location":"Curie/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Curie/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"DataGeneratingProject/","text":"Enum: DataGeneratingProject One of the Bridge2AI Data Generating Projects. URI: DataGeneratingProject Permissible Values Value Meaning Description aireadi https://reporter.nih.gov/project-details/10471118 AI-READI: Uncovering the details of how human health is restored after diseas... chorus https://reporter.nih.gov/project-details/10472824 CHoRUS: Collaborative Hospital Repository Uniting Standards cm4ai https://reporter.nih.gov/project-details/10473403 CM4AI: Cell Maps for AI voice https://reporter.nih.gov/project-details/10473236 Voice as a Biomarker of Health: Building an ethically sourced, bioaccoustic d... Slots Name Description relevance_to_dgps Relevance of the use case to one or more DGPs Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all LinkML Source name: DataGeneratingProject description: One of the Bridge2AI Data Generating Projects. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 permissible_values: aireadi: text: aireadi description: 'AI-READI: Uncovering the details of how human health is restored after disease, using type 2 diabetes as a model.' meaning: https://reporter.nih.gov/project-details/10471118 chorus: text: chorus description: 'CHoRUS: Collaborative Hospital Repository Uniting Standards. Using imaging, clinical, and other data collected in an ICU setting for diagnosis and risk prediction.' meaning: https://reporter.nih.gov/project-details/10472824 cm4ai: text: cm4ai description: 'CM4AI: Cell Maps for AI. Mapping spatiotemporal architecture of human cells to interpret cell structure/function in health and disease.' meaning: https://reporter.nih.gov/project-details/10473403 voice: text: voice description: 'Voice as a Biomarker of Health: Building an ethically sourced, bioaccoustic database to understand disease like never before.' meaning: https://reporter.nih.gov/project-details/10473236","title":"Enum: DataGeneratingProject"},{"location":"DataGeneratingProject/#enum-datageneratingproject","text":"One of the Bridge2AI Data Generating Projects. URI: DataGeneratingProject","title":"Enum: DataGeneratingProject"},{"location":"DataGeneratingProject/#permissible-values","text":"Value Meaning Description aireadi https://reporter.nih.gov/project-details/10471118 AI-READI: Uncovering the details of how human health is restored after diseas... chorus https://reporter.nih.gov/project-details/10472824 CHoRUS: Collaborative Hospital Repository Uniting Standards cm4ai https://reporter.nih.gov/project-details/10473403 CM4AI: Cell Maps for AI voice https://reporter.nih.gov/project-details/10473236 Voice as a Biomarker of Health: Building an ethically sourced, bioaccoustic d...","title":"Permissible Values"},{"location":"DataGeneratingProject/#slots","text":"Name Description relevance_to_dgps Relevance of the use case to one or more DGPs","title":"Slots"},{"location":"DataGeneratingProject/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"DataGeneratingProject/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"DataGeneratingProject/#linkml-source","text":"name: DataGeneratingProject description: One of the Bridge2AI Data Generating Projects. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 permissible_values: aireadi: text: aireadi description: 'AI-READI: Uncovering the details of how human health is restored after disease, using type 2 diabetes as a model.' meaning: https://reporter.nih.gov/project-details/10471118 chorus: text: chorus description: 'CHoRUS: Collaborative Hospital Repository Uniting Standards. Using imaging, clinical, and other data collected in an ICU setting for diagnosis and risk prediction.' meaning: https://reporter.nih.gov/project-details/10472824 cm4ai: text: cm4ai description: 'CM4AI: Cell Maps for AI. Mapping spatiotemporal architecture of human cells to interpret cell structure/function in health and disease.' meaning: https://reporter.nih.gov/project-details/10473403 voice: text: voice description: 'Voice as a Biomarker of Health: Building an ethically sourced, bioaccoustic database to understand disease like never before.' meaning: https://reporter.nih.gov/project-details/10473236","title":"LinkML Source"},{"location":"DataStandard/","text":"Class: DataStandard Represents a general purpose standard in the Bridge2AI Standards Registry. URI: https://w3id.org/bridge2ai/standards-schema-all/:DataStandard classDiagram class DataStandard DataStandardOrTool <|-- DataStandard DataStandard <|-- BiomedicalStandard DataStandard : category DataStandard : collection DataStandard ..> StandardsCollectionTag : collection DataStandard : concerns_data_topic DataStandard ..> DataTopic : concerns_data_topic DataStandard : contribution_date DataStandard : contributor_github_name DataStandard : contributor_name DataStandard : contributor_orcid DataStandard : description DataStandard : formal_specification DataStandard : has_relevant_organization DataStandard ..> Organization : has_relevant_organization DataStandard : id DataStandard : is_open DataStandard : name DataStandard : not_relevant_to_dgps DataStandard : publication DataStandard : purpose_detail DataStandard : related_to DataStandard ..> NamedThing : related_to DataStandard : requires_registration DataStandard : subclass_of DataStandard ..> NamedThing : subclass_of DataStandard : url Inheritance NamedThing DataStandardOrTool DataStandard BiomedicalStandard Slots Name Cardinality and Range Description Inheritance collection 0..* StandardsCollectionTag Tags for specific sets of standards DataStandardOrTool concerns_data_topic 0..* DataTopic Subject standard is generally applied in the context of object data topic DataStandardOrTool has_relevant_organization 0..* Organization Subject standard is managed or otherwise guided buy the object organization(s... DataStandardOrTool purpose_detail 0..1 String Text description of the standard or tool DataStandardOrTool is_open 0..1 Boolean Is the standard or tool FAIR and available free of cost? DataStandardOrTool requires_registration 0..1 Boolean Does usage of the standard or tool require registrion of a user or group with... DataStandardOrTool url 0..1 Uriorcurie URL for basic documentation of the standard or tool DataStandardOrTool publication 0..1 Uriorcurie Relevant publication for the standard or tool DataStandardOrTool formal_specification 0..1 Uriorcurie Relevant code repository or other location for a formal specification of the ... DataStandardOrTool not_relevant_to_dgps 0..1 Boolean Is the standard or tool currently relevant to DGPs? 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Prefer a DOI or PUBMED. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: publication owner: DataStandard domain_of: - DataStandardOrTool range: uriorcurie formal_specification: name: formal_specification description: Relevant code repository or other location for a formal specification of the standard or tool. Often a URL, particularly to a Git repository. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: formal_specification owner: DataStandard domain_of: - DataStandardOrTool range: uriorcurie not_relevant_to_dgps: name: not_relevant_to_dgps description: Is the standard or tool currently relevant to DGPs? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: not_relevant_to_dgps owner: DataStandard domain_of: - DataStandardOrTool range: boolean id: name: id description: A unique identifier for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:identifier identifier: true alias: id owner: DataStandard domain_of: - NamedThing range: uriorcurie required: true category: name: category description: Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\". from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: type domain: NamedThing designates_type: true alias: category owner: DataStandard domain_of: - NamedThing range: category_type name: name: name description: A human-readable name for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:name alias: name owner: DataStandard domain_of: - NamedThing range: string description: name: description description: A human-readable description for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:description alias: description owner: DataStandard domain_of: - NamedThing range: string subclass_of: name: subclass_of description: Holds between two classes where the domain class is a specialization of the range class. from_schema: https://w3id.org/bridge2ai/standards-schema-all exact_mappings: - rdfs:subClassOf - MESH:isa narrow_mappings: - rdfs:subPropertyOf rank: 1000 is_a: related_to domain: NamedThing multivalued: true inherited: true alias: subclass_of owner: DataStandard domain_of: - NamedThing range: NamedThing related_to: name: related_to description: A relationship that is asserted between two named things. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 domain: NamedThing multivalued: true inherited: true alias: related_to owner: DataStandard domain_of: - NamedThing - Organization symmetric: true range: NamedThing contributor_name: name: contributor_name description: The name of the person who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_name owner: DataStandard domain_of: - NamedThing range: string contributor_github_name: name: contributor_github_name description: The name of the github user who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_github_name owner: DataStandard domain_of: - NamedThing range: string contributor_orcid: name: contributor_orcid description: The ORCiD of the person who added this node. examples: - value: ORCID:0000-0001-1234-5678 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_orcid owner: DataStandard domain_of: - NamedThing range: uriorcurie contribution_date: name: contribution_date description: The date on which the node was added. examples: - value: '2023-03-20' from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contribution_date owner: DataStandard domain_of: - NamedThing range: date","title":"Class: DataStandard"},{"location":"DataStandard/#class-datastandard","text":"Represents a general purpose standard in the Bridge2AI Standards Registry. 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DataStandardOrTool purpose_detail 0..1 String Text description of the standard or tool DataStandardOrTool is_open 0..1 Boolean Is the standard or tool FAIR and available free of cost? DataStandardOrTool requires_registration 0..1 Boolean Does usage of the standard or tool require registrion of a user or group with... DataStandardOrTool url 0..1 Uriorcurie URL for basic documentation of the standard or tool DataStandardOrTool publication 0..1 Uriorcurie Relevant publication for the standard or tool DataStandardOrTool formal_specification 0..1 Uriorcurie Relevant code repository or other location for a formal specification of the ... DataStandardOrTool not_relevant_to_dgps 0..1 Boolean Is the standard or tool currently relevant to DGPs? DataStandardOrTool id 1..1 Uriorcurie A unique identifier for a thing NamedThing category 0..1 CategoryType Name of the high level ontology class in which this entity is categorized NamedThing name 0..1 String A human-readable name for a thing NamedThing description 0..1 String A human-readable description for a thing NamedThing subclass_of 0..* NamedThing Holds between two classes where the domain class is a specialization of the r... NamedThing related_to 0..* NamedThing A relationship that is asserted between two named things NamedThing contributor_name 0..1 String The name of the person who added this node NamedThing contributor_github_name 0..1 String The name of the github user who added this node NamedThing contributor_orcid 0..1 Uriorcurie The ORCiD of the person who added this node NamedThing contribution_date 0..1 Date The date on which the node was added NamedThing","title":"Slots"},{"location":"DataStandard/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"DataStandard/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"DataStandard/#mappings","text":"Mapping Type Mapped Value self https://w3id.org/bridge2ai/standards-schema-all/:DataStandard native https://w3id.org/bridge2ai/standards-schema-all/:DataStandard","title":"Mappings"},{"location":"DataStandard/#linkml-source","text":"","title":"LinkML Source"},{"location":"DataStandard/#direct","text":"name: DataStandard description: Represents a general purpose standard in the Bridge2AI Standards Registry. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: DataStandardOrTool","title":"Direct"},{"location":"DataStandard/#induced","text":"name: DataStandard description: Represents a general purpose standard in the Bridge2AI Standards Registry. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: DataStandardOrTool attributes: collection: name: collection description: Tags for specific sets of standards. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing multivalued: true alias: collection owner: DataStandard domain_of: - DataStandardOrTool range: StandardsCollectionTag concerns_data_topic: name: concerns_data_topic description: Subject standard is generally applied in the context of object data topic. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: related_to domain: DataStandardOrTool multivalued: true inherited: true alias: concerns_data_topic owner: DataStandard domain_of: - DataStandardOrTool range: DataTopic has_relevant_organization: name: has_relevant_organization description: Subject standard is managed or otherwise guided buy the object organization(s). from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: related_to domain: DataStandardOrTool multivalued: true inherited: true alias: has_relevant_organization owner: DataStandard domain_of: - DataStandardOrTool range: Organization purpose_detail: name: purpose_detail description: Text description of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: purpose_detail owner: DataStandard domain_of: - DataStandardOrTool range: string is_open: name: is_open description: Is the standard or tool FAIR and available free of cost? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: is_open owner: DataStandard domain_of: - DataStandardOrTool range: boolean requires_registration: name: requires_registration description: Does usage of the standard or tool require registrion of a user or group with some organization or managerial body? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: requires_registration owner: DataStandard domain_of: - DataStandardOrTool range: boolean url: name: url description: URL for basic documentation of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: url owner: DataStandard domain_of: - DataStandardOrTool - Organization range: uriorcurie publication: name: publication description: Relevant publication for the standard or tool. Prefer a DOI or PUBMED. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: publication owner: DataStandard domain_of: - DataStandardOrTool range: uriorcurie formal_specification: name: formal_specification description: Relevant code repository or other location for a formal specification of the standard or tool. Often a URL, particularly to a Git repository. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: formal_specification owner: DataStandard domain_of: - DataStandardOrTool range: uriorcurie not_relevant_to_dgps: name: not_relevant_to_dgps description: Is the standard or tool currently relevant to DGPs? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: not_relevant_to_dgps owner: DataStandard domain_of: - DataStandardOrTool range: boolean id: name: id description: A unique identifier for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:identifier identifier: true alias: id owner: DataStandard domain_of: - NamedThing range: uriorcurie required: true category: name: category description: Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\". from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: type domain: NamedThing designates_type: true alias: category owner: DataStandard domain_of: - NamedThing range: category_type name: name: name description: A human-readable name for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:name alias: name owner: DataStandard domain_of: - NamedThing range: string description: name: description description: A human-readable description for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:description alias: description owner: DataStandard domain_of: - NamedThing range: string subclass_of: name: subclass_of description: Holds between two classes where the domain class is a specialization of the range class. from_schema: https://w3id.org/bridge2ai/standards-schema-all exact_mappings: - rdfs:subClassOf - MESH:isa narrow_mappings: - rdfs:subPropertyOf rank: 1000 is_a: related_to domain: NamedThing multivalued: true inherited: true alias: subclass_of owner: DataStandard domain_of: - NamedThing range: NamedThing related_to: name: related_to description: A relationship that is asserted between two named things. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 domain: NamedThing multivalued: true inherited: true alias: related_to owner: DataStandard domain_of: - NamedThing - Organization symmetric: true range: NamedThing contributor_name: name: contributor_name description: The name of the person who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_name owner: DataStandard domain_of: - NamedThing range: string contributor_github_name: name: contributor_github_name description: The name of the github user who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_github_name owner: DataStandard domain_of: - NamedThing range: string contributor_orcid: name: contributor_orcid description: The ORCiD of the person who added this node. examples: - value: ORCID:0000-0001-1234-5678 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_orcid owner: DataStandard domain_of: - NamedThing range: uriorcurie contribution_date: name: contribution_date description: The date on which the node was added. examples: - value: '2023-03-20' from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contribution_date owner: DataStandard domain_of: - NamedThing range: date","title":"Induced"},{"location":"DataStandardOrTool/","text":"Class: DataStandardOrTool Represents a standard or tool in the Bridge2AI Standards Registry. URI: https://w3id.org/bridge2ai/standards-schema-all/:DataStandardOrTool classDiagram class DataStandardOrTool NamedThing <|-- DataStandardOrTool DataStandardOrTool <|-- DataStandard DataStandardOrTool <|-- Registry DataStandardOrTool <|-- OntologyOrVocabulary DataStandardOrTool <|-- ModelRepository DataStandardOrTool <|-- ReferenceDataOrDataset DataStandardOrTool <|-- SoftwareOrTool DataStandardOrTool <|-- ReferenceImplementation DataStandardOrTool <|-- TrainingProgram DataStandardOrTool : category DataStandardOrTool : collection DataStandardOrTool ..> StandardsCollectionTag : collection DataStandardOrTool : concerns_data_topic DataStandardOrTool ..> DataTopic : concerns_data_topic DataStandardOrTool : contribution_date DataStandardOrTool : contributor_github_name DataStandardOrTool : contributor_name DataStandardOrTool : contributor_orcid DataStandardOrTool : description DataStandardOrTool : formal_specification DataStandardOrTool : has_relevant_organization DataStandardOrTool ..> Organization : has_relevant_organization DataStandardOrTool : id DataStandardOrTool : is_open DataStandardOrTool : name DataStandardOrTool : not_relevant_to_dgps DataStandardOrTool : publication DataStandardOrTool : purpose_detail DataStandardOrTool : related_to DataStandardOrTool ..> NamedThing : related_to DataStandardOrTool : requires_registration DataStandardOrTool : subclass_of DataStandardOrTool ..> NamedThing : subclass_of DataStandardOrTool : url Inheritance NamedThing DataStandardOrTool DataStandard Registry OntologyOrVocabulary ModelRepository ReferenceDataOrDataset SoftwareOrTool ReferenceImplementation TrainingProgram Slots Name Cardinality and Range Description Inheritance collection 0..* StandardsCollectionTag Tags for specific sets of standards direct concerns_data_topic 0..* DataTopic Subject standard is generally applied in the context of object data topic direct has_relevant_organization 0..* Organization Subject standard is managed or otherwise guided buy the object organization(s... direct purpose_detail 0..1 String Text description of the standard or tool direct is_open 0..1 Boolean Is the standard or tool FAIR and available free of cost? direct requires_registration 0..1 Boolean Does usage of the standard or tool require registrion of a user or group with... direct url 0..1 Uriorcurie URL for basic documentation of the standard or tool direct publication 0..1 Uriorcurie Relevant publication for the standard or tool direct formal_specification 0..1 Uriorcurie Relevant code repository or other location for a formal specification of the ... direct not_relevant_to_dgps 0..1 Boolean Is the standard or tool currently relevant to DGPs? direct id 1..1 Uriorcurie A unique identifier for a thing NamedThing category 0..1 CategoryType Name of the high level ontology class in which this entity is categorized NamedThing name 0..1 String A human-readable name for a thing NamedThing description 0..1 String A human-readable description for a thing NamedThing subclass_of 0..* NamedThing Holds between two classes where the domain class is a specialization of the r... NamedThing related_to 0..* NamedThing A relationship that is asserted between two named things NamedThing contributor_name 0..1 String The name of the person who added this node NamedThing contributor_github_name 0..1 String The name of the github user who added this node NamedThing contributor_orcid 0..1 Uriorcurie The ORCiD of the person who added this node NamedThing contribution_date 0..1 Date The date on which the node was added NamedThing Usages used by used in type used UseCase standards_and_tools_for_dgp_use range DataStandardOrTool UseCase alternative_standards_and_tools range DataStandardOrTool DataStandardOrTool concerns_data_topic domain DataStandardOrTool DataStandardOrTool has_relevant_organization domain DataStandardOrTool DataStandard concerns_data_topic domain DataStandardOrTool DataStandard has_relevant_organization domain DataStandardOrTool BiomedicalStandard concerns_data_topic domain DataStandardOrTool BiomedicalStandard has_relevant_organization domain DataStandardOrTool Registry concerns_data_topic domain DataStandardOrTool Registry has_relevant_organization domain DataStandardOrTool OntologyOrVocabulary concerns_data_topic domain DataStandardOrTool OntologyOrVocabulary has_relevant_organization domain DataStandardOrTool ModelRepository concerns_data_topic domain DataStandardOrTool ModelRepository has_relevant_organization domain DataStandardOrTool ReferenceDataOrDataset concerns_data_topic domain DataStandardOrTool ReferenceDataOrDataset has_relevant_organization domain DataStandardOrTool SoftwareOrTool concerns_data_topic domain DataStandardOrTool SoftwareOrTool has_relevant_organization domain DataStandardOrTool ReferenceImplementation concerns_data_topic domain DataStandardOrTool ReferenceImplementation has_relevant_organization domain DataStandardOrTool TrainingProgram concerns_data_topic domain DataStandardOrTool TrainingProgram has_relevant_organization domain DataStandardOrTool DataStandardOrToolContainer data_standardortools_collection range DataStandardOrTool Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all Mappings Mapping Type Mapped Value self https://w3id.org/bridge2ai/standards-schema-all/:DataStandardOrTool native https://w3id.org/bridge2ai/standards-schema-all/:DataStandardOrTool LinkML Source Direct name: DataStandardOrTool description: Represents a standard or tool in the Bridge2AI Standards Registry. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: NamedThing slots: - collection - concerns_data_topic - has_relevant_organization - purpose_detail - is_open - requires_registration - url - publication - formal_specification - not_relevant_to_dgps Induced name: DataStandardOrTool description: Represents a standard or tool in the Bridge2AI Standards Registry. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: NamedThing attributes: collection: name: collection description: Tags for specific sets of standards. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing multivalued: true alias: collection owner: DataStandardOrTool domain_of: - DataStandardOrTool range: StandardsCollectionTag concerns_data_topic: name: concerns_data_topic description: Subject standard is generally applied in the context of object data topic. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: related_to domain: DataStandardOrTool multivalued: true inherited: true alias: concerns_data_topic owner: DataStandardOrTool domain_of: - DataStandardOrTool range: DataTopic has_relevant_organization: name: has_relevant_organization description: Subject standard is managed or otherwise guided buy the object organization(s). from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: related_to domain: DataStandardOrTool multivalued: true inherited: true alias: has_relevant_organization owner: DataStandardOrTool domain_of: - DataStandardOrTool range: Organization purpose_detail: name: purpose_detail description: Text description of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: purpose_detail owner: DataStandardOrTool domain_of: - DataStandardOrTool range: string is_open: name: is_open description: Is the standard or tool FAIR and available free of cost? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: is_open owner: DataStandardOrTool domain_of: - DataStandardOrTool range: boolean requires_registration: name: requires_registration description: Does usage of the standard or tool require registrion of a user or group with some organization or managerial body? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: requires_registration owner: DataStandardOrTool domain_of: - DataStandardOrTool range: boolean url: name: url description: URL for basic documentation of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: url owner: DataStandardOrTool domain_of: - DataStandardOrTool - Organization range: uriorcurie publication: name: publication description: Relevant publication for the standard or tool. Prefer a DOI or PUBMED. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: publication owner: DataStandardOrTool domain_of: - DataStandardOrTool range: uriorcurie formal_specification: name: formal_specification description: Relevant code repository or other location for a formal specification of the standard or tool. Often a URL, particularly to a Git repository. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: formal_specification owner: DataStandardOrTool domain_of: - DataStandardOrTool range: uriorcurie not_relevant_to_dgps: name: not_relevant_to_dgps description: Is the standard or tool currently relevant to DGPs? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: not_relevant_to_dgps owner: DataStandardOrTool domain_of: - DataStandardOrTool range: boolean id: name: id description: A unique identifier for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:identifier identifier: true alias: id owner: DataStandardOrTool domain_of: - NamedThing range: uriorcurie required: true category: name: category description: Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\". from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: type domain: NamedThing designates_type: true alias: category owner: DataStandardOrTool domain_of: - NamedThing range: category_type name: name: name description: A human-readable name for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:name alias: name owner: DataStandardOrTool domain_of: - NamedThing range: string description: name: description description: A human-readable description for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:description alias: description owner: DataStandardOrTool domain_of: - NamedThing range: string subclass_of: name: subclass_of description: Holds between two classes where the domain class is a specialization of the range class. from_schema: https://w3id.org/bridge2ai/standards-schema-all exact_mappings: - rdfs:subClassOf - MESH:isa narrow_mappings: - rdfs:subPropertyOf rank: 1000 is_a: related_to domain: NamedThing multivalued: true inherited: true alias: subclass_of owner: DataStandardOrTool domain_of: - NamedThing range: NamedThing related_to: name: related_to description: A relationship that is asserted between two named things. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 domain: NamedThing multivalued: true inherited: true alias: related_to owner: DataStandardOrTool domain_of: - NamedThing - Organization symmetric: true range: NamedThing contributor_name: name: contributor_name description: The name of the person who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_name owner: DataStandardOrTool domain_of: - NamedThing range: string contributor_github_name: name: contributor_github_name description: The name of the github user who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_github_name owner: DataStandardOrTool domain_of: - NamedThing range: string contributor_orcid: name: contributor_orcid description: The ORCiD of the person who added this node. examples: - value: ORCID:0000-0001-1234-5678 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_orcid owner: DataStandardOrTool domain_of: - NamedThing range: uriorcurie contribution_date: name: contribution_date description: The date on which the node was added. examples: - value: '2023-03-20' from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contribution_date owner: DataStandardOrTool domain_of: - NamedThing range: date","title":"Class: DataStandardOrTool"},{"location":"DataStandardOrTool/#class-datastandardortool","text":"Represents a standard or tool in the Bridge2AI Standards Registry. URI: https://w3id.org/bridge2ai/standards-schema-all/:DataStandardOrTool classDiagram class DataStandardOrTool NamedThing <|-- DataStandardOrTool DataStandardOrTool <|-- DataStandard DataStandardOrTool <|-- Registry DataStandardOrTool <|-- OntologyOrVocabulary DataStandardOrTool <|-- ModelRepository DataStandardOrTool <|-- ReferenceDataOrDataset DataStandardOrTool <|-- SoftwareOrTool DataStandardOrTool <|-- ReferenceImplementation DataStandardOrTool <|-- TrainingProgram DataStandardOrTool : category DataStandardOrTool : collection DataStandardOrTool ..> StandardsCollectionTag : collection DataStandardOrTool : concerns_data_topic DataStandardOrTool ..> DataTopic : concerns_data_topic DataStandardOrTool : contribution_date DataStandardOrTool : contributor_github_name DataStandardOrTool : contributor_name DataStandardOrTool : contributor_orcid DataStandardOrTool : description DataStandardOrTool : formal_specification DataStandardOrTool : has_relevant_organization DataStandardOrTool ..> Organization : has_relevant_organization DataStandardOrTool : id DataStandardOrTool : is_open DataStandardOrTool : name DataStandardOrTool : not_relevant_to_dgps DataStandardOrTool : publication DataStandardOrTool : purpose_detail DataStandardOrTool : related_to DataStandardOrTool ..> NamedThing : related_to DataStandardOrTool : requires_registration DataStandardOrTool : subclass_of DataStandardOrTool ..> NamedThing : subclass_of DataStandardOrTool : url","title":"Class: DataStandardOrTool"},{"location":"DataStandardOrTool/#inheritance","text":"NamedThing DataStandardOrTool DataStandard Registry OntologyOrVocabulary ModelRepository ReferenceDataOrDataset SoftwareOrTool ReferenceImplementation TrainingProgram","title":"Inheritance"},{"location":"DataStandardOrTool/#slots","text":"Name Cardinality and Range Description Inheritance collection 0..* StandardsCollectionTag Tags for specific sets of standards direct concerns_data_topic 0..* DataTopic Subject standard is generally applied in the context of object data topic direct has_relevant_organization 0..* Organization Subject standard is managed or otherwise guided buy the object organization(s... direct purpose_detail 0..1 String Text description of the standard or tool direct is_open 0..1 Boolean Is the standard or tool FAIR and available free of cost? direct requires_registration 0..1 Boolean Does usage of the standard or tool require registrion of a user or group with... direct url 0..1 Uriorcurie URL for basic documentation of the standard or tool direct publication 0..1 Uriorcurie Relevant publication for the standard or tool direct formal_specification 0..1 Uriorcurie Relevant code repository or other location for a formal specification of the ... direct not_relevant_to_dgps 0..1 Boolean Is the standard or tool currently relevant to DGPs? direct id 1..1 Uriorcurie A unique identifier for a thing NamedThing category 0..1 CategoryType Name of the high level ontology class in which this entity is categorized NamedThing name 0..1 String A human-readable name for a thing NamedThing description 0..1 String A human-readable description for a thing NamedThing subclass_of 0..* NamedThing Holds between two classes where the domain class is a specialization of the r... NamedThing related_to 0..* NamedThing A relationship that is asserted between two named things NamedThing contributor_name 0..1 String The name of the person who added this node NamedThing contributor_github_name 0..1 String The name of the github user who added this node NamedThing contributor_orcid 0..1 Uriorcurie The ORCiD of the person who added this node NamedThing contribution_date 0..1 Date The date on which the node was added NamedThing","title":"Slots"},{"location":"DataStandardOrTool/#usages","text":"used by used in type used UseCase standards_and_tools_for_dgp_use range DataStandardOrTool UseCase alternative_standards_and_tools range DataStandardOrTool DataStandardOrTool concerns_data_topic domain DataStandardOrTool DataStandardOrTool has_relevant_organization domain DataStandardOrTool DataStandard concerns_data_topic domain DataStandardOrTool DataStandard has_relevant_organization domain DataStandardOrTool BiomedicalStandard concerns_data_topic domain DataStandardOrTool BiomedicalStandard has_relevant_organization domain DataStandardOrTool Registry concerns_data_topic domain DataStandardOrTool Registry has_relevant_organization domain DataStandardOrTool OntologyOrVocabulary concerns_data_topic domain DataStandardOrTool OntologyOrVocabulary has_relevant_organization domain DataStandardOrTool ModelRepository concerns_data_topic domain DataStandardOrTool ModelRepository has_relevant_organization domain DataStandardOrTool ReferenceDataOrDataset concerns_data_topic domain DataStandardOrTool ReferenceDataOrDataset has_relevant_organization domain DataStandardOrTool SoftwareOrTool concerns_data_topic domain DataStandardOrTool SoftwareOrTool has_relevant_organization domain DataStandardOrTool ReferenceImplementation concerns_data_topic domain DataStandardOrTool ReferenceImplementation has_relevant_organization domain DataStandardOrTool TrainingProgram concerns_data_topic domain DataStandardOrTool TrainingProgram has_relevant_organization domain DataStandardOrTool DataStandardOrToolContainer data_standardortools_collection range DataStandardOrTool","title":"Usages"},{"location":"DataStandardOrTool/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"DataStandardOrTool/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"DataStandardOrTool/#mappings","text":"Mapping Type Mapped Value self https://w3id.org/bridge2ai/standards-schema-all/:DataStandardOrTool native https://w3id.org/bridge2ai/standards-schema-all/:DataStandardOrTool","title":"Mappings"},{"location":"DataStandardOrTool/#linkml-source","text":"","title":"LinkML Source"},{"location":"DataStandardOrTool/#direct","text":"name: DataStandardOrTool description: Represents a standard or tool in the Bridge2AI Standards Registry. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: NamedThing slots: - collection - concerns_data_topic - has_relevant_organization - purpose_detail - is_open - requires_registration - url - publication - formal_specification - not_relevant_to_dgps","title":"Direct"},{"location":"DataStandardOrTool/#induced","text":"name: DataStandardOrTool description: Represents a standard or tool in the Bridge2AI Standards Registry. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: NamedThing attributes: collection: name: collection description: Tags for specific sets of standards. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing multivalued: true alias: collection owner: DataStandardOrTool domain_of: - DataStandardOrTool range: StandardsCollectionTag concerns_data_topic: name: concerns_data_topic description: Subject standard is generally applied in the context of object data topic. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: related_to domain: DataStandardOrTool multivalued: true inherited: true alias: concerns_data_topic owner: DataStandardOrTool domain_of: - DataStandardOrTool range: DataTopic has_relevant_organization: name: has_relevant_organization description: Subject standard is managed or otherwise guided buy the object organization(s). from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: related_to domain: DataStandardOrTool multivalued: true inherited: true alias: has_relevant_organization owner: DataStandardOrTool domain_of: - DataStandardOrTool range: Organization purpose_detail: name: purpose_detail description: Text description of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: purpose_detail owner: DataStandardOrTool domain_of: - DataStandardOrTool range: string is_open: name: is_open description: Is the standard or tool FAIR and available free of cost? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: is_open owner: DataStandardOrTool domain_of: - DataStandardOrTool range: boolean requires_registration: name: requires_registration description: Does usage of the standard or tool require registrion of a user or group with some organization or managerial body? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: requires_registration owner: DataStandardOrTool domain_of: - DataStandardOrTool range: boolean url: name: url description: URL for basic documentation of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: url owner: DataStandardOrTool domain_of: - DataStandardOrTool - Organization range: uriorcurie publication: name: publication description: Relevant publication for the standard or tool. Prefer a DOI or PUBMED. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: publication owner: DataStandardOrTool domain_of: - DataStandardOrTool range: uriorcurie formal_specification: name: formal_specification description: Relevant code repository or other location for a formal specification of the standard or tool. Often a URL, particularly to a Git repository. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: formal_specification owner: DataStandardOrTool domain_of: - DataStandardOrTool range: uriorcurie not_relevant_to_dgps: name: not_relevant_to_dgps description: Is the standard or tool currently relevant to DGPs? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: not_relevant_to_dgps owner: DataStandardOrTool domain_of: - DataStandardOrTool range: boolean id: name: id description: A unique identifier for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:identifier identifier: true alias: id owner: DataStandardOrTool domain_of: - NamedThing range: uriorcurie required: true category: name: category description: Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\". from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: type domain: NamedThing designates_type: true alias: category owner: DataStandardOrTool domain_of: - NamedThing range: category_type name: name: name description: A human-readable name for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:name alias: name owner: DataStandardOrTool domain_of: - NamedThing range: string description: name: description description: A human-readable description for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:description alias: description owner: DataStandardOrTool domain_of: - NamedThing range: string subclass_of: name: subclass_of description: Holds between two classes where the domain class is a specialization of the range class. from_schema: https://w3id.org/bridge2ai/standards-schema-all exact_mappings: - rdfs:subClassOf - MESH:isa narrow_mappings: - rdfs:subPropertyOf rank: 1000 is_a: related_to domain: NamedThing multivalued: true inherited: true alias: subclass_of owner: DataStandardOrTool domain_of: - NamedThing range: NamedThing related_to: name: related_to description: A relationship that is asserted between two named things. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 domain: NamedThing multivalued: true inherited: true alias: related_to owner: DataStandardOrTool domain_of: - NamedThing - Organization symmetric: true range: NamedThing contributor_name: name: contributor_name description: The name of the person who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_name owner: DataStandardOrTool domain_of: - NamedThing range: string contributor_github_name: name: contributor_github_name description: The name of the github user who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_github_name owner: DataStandardOrTool domain_of: - NamedThing range: string contributor_orcid: name: contributor_orcid description: The ORCiD of the person who added this node. examples: - value: ORCID:0000-0001-1234-5678 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_orcid owner: DataStandardOrTool domain_of: - NamedThing range: uriorcurie contribution_date: name: contribution_date description: The date on which the node was added. examples: - value: '2023-03-20' from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contribution_date owner: DataStandardOrTool domain_of: - NamedThing range: date","title":"Induced"},{"location":"DataStandardOrToolContainer/","text":"Class: DataStandardOrToolContainer A container for DataStandardOrTool(s). URI: https://w3id.org/bridge2ai/standards-schema-all/:DataStandardOrToolContainer classDiagram class DataStandardOrToolContainer DataStandardOrToolContainer : data_standardortools_collection DataStandardOrToolContainer ..> DataStandardOrTool : data_standardortools_collection Slots Name Cardinality and Range Description Inheritance data_standardortools_collection 0..* DataStandardOrTool Collection of associated data standards or tools direct Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all Mappings Mapping Type Mapped Value self https://w3id.org/bridge2ai/standards-schema-all/:DataStandardOrToolContainer native https://w3id.org/bridge2ai/standards-schema-all/:DataStandardOrToolContainer LinkML Source Direct name: DataStandardOrToolContainer description: A container for DataStandardOrTool(s). from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slots: - data_standardortools_collection Induced name: DataStandardOrToolContainer description: A container for DataStandardOrTool(s). from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 attributes: data_standardortools_collection: name: data_standardortools_collection description: Collection of associated data standards or tools from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 multivalued: true alias: data_standardortools_collection owner: DataStandardOrToolContainer domain_of: - DataStandardOrToolContainer range: DataStandardOrTool inlined: true inlined_as_list: true","title":"Class: DataStandardOrToolContainer"},{"location":"DataStandardOrToolContainer/#class-datastandardortoolcontainer","text":"A container for DataStandardOrTool(s). URI: https://w3id.org/bridge2ai/standards-schema-all/:DataStandardOrToolContainer classDiagram class DataStandardOrToolContainer DataStandardOrToolContainer : data_standardortools_collection DataStandardOrToolContainer ..> DataStandardOrTool : data_standardortools_collection","title":"Class: DataStandardOrToolContainer"},{"location":"DataStandardOrToolContainer/#slots","text":"Name Cardinality and Range Description Inheritance data_standardortools_collection 0..* DataStandardOrTool Collection of associated data standards or tools direct","title":"Slots"},{"location":"DataStandardOrToolContainer/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"DataStandardOrToolContainer/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"DataStandardOrToolContainer/#mappings","text":"Mapping Type Mapped Value self https://w3id.org/bridge2ai/standards-schema-all/:DataStandardOrToolContainer native https://w3id.org/bridge2ai/standards-schema-all/:DataStandardOrToolContainer","title":"Mappings"},{"location":"DataStandardOrToolContainer/#linkml-source","text":"","title":"LinkML Source"},{"location":"DataStandardOrToolContainer/#direct","text":"name: DataStandardOrToolContainer description: A container for DataStandardOrTool(s). from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slots: - data_standardortools_collection","title":"Direct"},{"location":"DataStandardOrToolContainer/#induced","text":"name: DataStandardOrToolContainer description: A container for DataStandardOrTool(s). from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 attributes: data_standardortools_collection: name: data_standardortools_collection description: Collection of associated data standards or tools from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 multivalued: true alias: data_standardortools_collection owner: DataStandardOrToolContainer domain_of: - DataStandardOrToolContainer range: DataStandardOrTool inlined: true inlined_as_list: true","title":"Induced"},{"location":"DataSubstrate/","text":"Class: DataSubstrate Represents a data substrate for Bridge2AI data. This may be a high-level data structure or a specific implementation of that structure. Interpret as \"data, in this form or format\", as compared to DataStandard, which refers to the set of rules defining a standard. For example, data in TSV format is represented as a DataSubstrate but the concept of TSV format is a DataStandard. URI: https://w3id.org/bridge2ai/standards-schema-all/:DataSubstrate classDiagram class DataSubstrate NamedThing <|-- DataSubstrate DataSubstrate : category DataSubstrate : contribution_date DataSubstrate : contributor_github_name DataSubstrate : contributor_name DataSubstrate : contributor_orcid DataSubstrate : description DataSubstrate : edam_id DataSubstrate : file_extensions DataSubstrate : id DataSubstrate : limitations DataSubstrate : mesh_id DataSubstrate : metadata_storage DataSubstrate : name DataSubstrate : ncit_id DataSubstrate : related_to DataSubstrate ..> NamedThing : related_to DataSubstrate : subclass_of DataSubstrate ..> NamedThing : subclass_of Inheritance NamedThing DataSubstrate Slots Name Cardinality and Range Description Inheritance edam_id 0..1 EdamIdentifier Unique EDAM identifier direct mesh_id 0..1 MeshIdentifier Unique MeSH identifier direct ncit_id 0..1 NcitIdentifier Unique NCIt Identifier direct metadata_storage 0..* String Data Substrate in which metadata is stored direct file_extensions 0..* String Commonly used file extensions for this substrate direct limitations 0..* String Potential obstacles particular to this substrate or implementation direct id 1..1 Uriorcurie A unique identifier for a thing NamedThing category 0..1 CategoryType Name of the high level ontology class in which this entity is categorized NamedThing name 0..1 String A human-readable name for a thing NamedThing description 0..1 String A human-readable description for a thing NamedThing subclass_of 0..* NamedThing Holds between two classes where the domain class is a specialization of the r... NamedThing related_to 0..* NamedThing A relationship that is asserted between two named things NamedThing contributor_name 0..1 String The name of the person who added this node NamedThing contributor_github_name 0..1 String The name of the github user who added this node NamedThing contributor_orcid 0..1 Uriorcurie The ORCiD of the person who added this node NamedThing contribution_date 0..1 Date The date on which the node was added NamedThing Usages used by used in type used UseCase data_substrates range DataSubstrate DataSubstrateContainer data_substrates_collection range DataSubstrate Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all Mappings Mapping Type Mapped Value self https://w3id.org/bridge2ai/standards-schema-all/:DataSubstrate native https://w3id.org/bridge2ai/standards-schema-all/:DataSubstrate LinkML Source Direct name: DataSubstrate description: Represents a data substrate for Bridge2AI data. This may be a high-level data structure or a specific implementation of that structure. Interpret as \"data, in this form or format\", as compared to DataStandard, which refers to the set of rules defining a standard. For example, data in TSV format is represented as a DataSubstrate but the concept of TSV format is a DataStandard. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: NamedThing slots: - edam_id - mesh_id - ncit_id - metadata_storage - file_extensions - limitations Induced name: DataSubstrate description: Represents a data substrate for Bridge2AI data. This may be a high-level data structure or a specific implementation of that structure. Interpret as \"data, in this form or format\", as compared to DataStandard, which refers to the set of rules defining a standard. For example, data in TSV format is represented as a DataSubstrate but the concept of TSV format is a DataStandard. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: NamedThing attributes: edam_id: name: edam_id description: Unique EDAM identifier examples: - value: edam.data:0006 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 values_from: - edam.data - edam.format - edam.operation - edam.topic alias: edam_id owner: DataSubstrate domain_of: - DataTopic - DataSubstrate range: edam_identifier mesh_id: name: mesh_id description: Unique MeSH identifier examples: - value: MeSH:D014831 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 values_from: - MeSH alias: mesh_id owner: DataSubstrate domain_of: - DataTopic - DataSubstrate range: mesh_identifier ncit_id: name: ncit_id description: Unique NCIt Identifier examples: - value: NCIT:C92692 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 values_from: - NCIT alias: ncit_id owner: DataSubstrate domain_of: - DataTopic - DataSubstrate range: ncit_identifier metadata_storage: name: metadata_storage description: Data Substrate in which metadata is stored. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing multivalued: true alias: metadata_storage owner: DataSubstrate domain_of: - DataSubstrate range: string any_of: - range: DataSubstrate - equals_string: file headers file_extensions: name: file_extensions description: Commonly used file extensions for this substrate. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing multivalued: true alias: file_extensions owner: DataSubstrate domain_of: - DataSubstrate range: string limitations: name: limitations description: 'Potential obstacles particular to this substrate or implementation. ' from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing multivalued: true alias: limitations owner: DataSubstrate domain_of: - DataSubstrate range: string id: name: id description: A unique identifier for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:identifier identifier: true alias: id owner: DataSubstrate domain_of: - NamedThing range: uriorcurie required: true category: name: category description: Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\". from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: type domain: NamedThing designates_type: true alias: category owner: DataSubstrate domain_of: - NamedThing range: category_type name: name: name description: A human-readable name for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:name alias: name owner: DataSubstrate domain_of: - NamedThing range: string description: name: description description: A human-readable description for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:description alias: description owner: DataSubstrate domain_of: - NamedThing range: string subclass_of: name: subclass_of description: Holds between two classes where the domain class is a specialization of the range class. from_schema: https://w3id.org/bridge2ai/standards-schema-all exact_mappings: - rdfs:subClassOf - MESH:isa narrow_mappings: - rdfs:subPropertyOf rank: 1000 is_a: related_to domain: NamedThing multivalued: true inherited: true alias: subclass_of owner: DataSubstrate domain_of: - NamedThing range: NamedThing related_to: name: related_to description: A relationship that is asserted between two named things. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 domain: NamedThing multivalued: true inherited: true alias: related_to owner: DataSubstrate domain_of: - NamedThing - Organization symmetric: true range: NamedThing contributor_name: name: contributor_name description: The name of the person who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_name owner: DataSubstrate domain_of: - NamedThing range: string contributor_github_name: name: contributor_github_name description: The name of the github user who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_github_name owner: DataSubstrate domain_of: - NamedThing range: string contributor_orcid: name: contributor_orcid description: The ORCiD of the person who added this node. examples: - value: ORCID:0000-0001-1234-5678 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_orcid owner: DataSubstrate domain_of: - NamedThing range: uriorcurie contribution_date: name: contribution_date description: The date on which the node was added. examples: - value: '2023-03-20' from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contribution_date owner: DataSubstrate domain_of: - NamedThing range: date","title":"Class: DataSubstrate"},{"location":"DataSubstrate/#class-datasubstrate","text":"Represents a data substrate for Bridge2AI data. This may be a high-level data structure or a specific implementation of that structure. Interpret as \"data, in this form or format\", as compared to DataStandard, which refers to the set of rules defining a standard. For example, data in TSV format is represented as a DataSubstrate but the concept of TSV format is a DataStandard. URI: https://w3id.org/bridge2ai/standards-schema-all/:DataSubstrate classDiagram class DataSubstrate NamedThing <|-- DataSubstrate DataSubstrate : category DataSubstrate : contribution_date DataSubstrate : contributor_github_name DataSubstrate : contributor_name DataSubstrate : contributor_orcid DataSubstrate : description DataSubstrate : edam_id DataSubstrate : file_extensions DataSubstrate : id DataSubstrate : limitations DataSubstrate : mesh_id DataSubstrate : metadata_storage DataSubstrate : name DataSubstrate : ncit_id DataSubstrate : related_to DataSubstrate ..> NamedThing : related_to DataSubstrate : subclass_of DataSubstrate ..> NamedThing : subclass_of","title":"Class: DataSubstrate"},{"location":"DataSubstrate/#inheritance","text":"NamedThing DataSubstrate","title":"Inheritance"},{"location":"DataSubstrate/#slots","text":"Name Cardinality and Range Description Inheritance edam_id 0..1 EdamIdentifier Unique EDAM identifier direct mesh_id 0..1 MeshIdentifier Unique MeSH identifier direct ncit_id 0..1 NcitIdentifier Unique NCIt Identifier direct metadata_storage 0..* String Data Substrate in which metadata is stored direct file_extensions 0..* String Commonly used file extensions for this substrate direct limitations 0..* String Potential obstacles particular to this substrate or implementation direct id 1..1 Uriorcurie A unique identifier for a thing NamedThing category 0..1 CategoryType Name of the high level ontology class in which this entity is categorized NamedThing name 0..1 String A human-readable name for a thing NamedThing description 0..1 String A human-readable description for a thing NamedThing subclass_of 0..* NamedThing Holds between two classes where the domain class is a specialization of the r... NamedThing related_to 0..* NamedThing A relationship that is asserted between two named things NamedThing contributor_name 0..1 String The name of the person who added this node NamedThing contributor_github_name 0..1 String The name of the github user who added this node NamedThing contributor_orcid 0..1 Uriorcurie The ORCiD of the person who added this node NamedThing contribution_date 0..1 Date The date on which the node was added NamedThing","title":"Slots"},{"location":"DataSubstrate/#usages","text":"used by used in type used UseCase data_substrates range DataSubstrate DataSubstrateContainer data_substrates_collection range DataSubstrate","title":"Usages"},{"location":"DataSubstrate/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"DataSubstrate/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"DataSubstrate/#mappings","text":"Mapping Type Mapped Value self https://w3id.org/bridge2ai/standards-schema-all/:DataSubstrate native https://w3id.org/bridge2ai/standards-schema-all/:DataSubstrate","title":"Mappings"},{"location":"DataSubstrate/#linkml-source","text":"","title":"LinkML Source"},{"location":"DataSubstrate/#direct","text":"name: DataSubstrate description: Represents a data substrate for Bridge2AI data. This may be a high-level data structure or a specific implementation of that structure. Interpret as \"data, in this form or format\", as compared to DataStandard, which refers to the set of rules defining a standard. For example, data in TSV format is represented as a DataSubstrate but the concept of TSV format is a DataStandard. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: NamedThing slots: - edam_id - mesh_id - ncit_id - metadata_storage - file_extensions - limitations","title":"Direct"},{"location":"DataSubstrate/#induced","text":"name: DataSubstrate description: Represents a data substrate for Bridge2AI data. This may be a high-level data structure or a specific implementation of that structure. Interpret as \"data, in this form or format\", as compared to DataStandard, which refers to the set of rules defining a standard. For example, data in TSV format is represented as a DataSubstrate but the concept of TSV format is a DataStandard. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: NamedThing attributes: edam_id: name: edam_id description: Unique EDAM identifier examples: - value: edam.data:0006 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 values_from: - edam.data - edam.format - edam.operation - edam.topic alias: edam_id owner: DataSubstrate domain_of: - DataTopic - DataSubstrate range: edam_identifier mesh_id: name: mesh_id description: Unique MeSH identifier examples: - value: MeSH:D014831 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 values_from: - MeSH alias: mesh_id owner: DataSubstrate domain_of: - DataTopic - DataSubstrate range: mesh_identifier ncit_id: name: ncit_id description: Unique NCIt Identifier examples: - value: NCIT:C92692 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 values_from: - NCIT alias: ncit_id owner: DataSubstrate domain_of: - DataTopic - DataSubstrate range: ncit_identifier metadata_storage: name: metadata_storage description: Data Substrate in which metadata is stored. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing multivalued: true alias: metadata_storage owner: DataSubstrate domain_of: - DataSubstrate range: string any_of: - range: DataSubstrate - equals_string: file headers file_extensions: name: file_extensions description: Commonly used file extensions for this substrate. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing multivalued: true alias: file_extensions owner: DataSubstrate domain_of: - DataSubstrate range: string limitations: name: limitations description: 'Potential obstacles particular to this substrate or implementation. ' from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing multivalued: true alias: limitations owner: DataSubstrate domain_of: - DataSubstrate range: string id: name: id description: A unique identifier for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:identifier identifier: true alias: id owner: DataSubstrate domain_of: - NamedThing range: uriorcurie required: true category: name: category description: Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\". from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: type domain: NamedThing designates_type: true alias: category owner: DataSubstrate domain_of: - NamedThing range: category_type name: name: name description: A human-readable name for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:name alias: name owner: DataSubstrate domain_of: - NamedThing range: string description: name: description description: A human-readable description for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:description alias: description owner: DataSubstrate domain_of: - NamedThing range: string subclass_of: name: subclass_of description: Holds between two classes where the domain class is a specialization of the range class. from_schema: https://w3id.org/bridge2ai/standards-schema-all exact_mappings: - rdfs:subClassOf - MESH:isa narrow_mappings: - rdfs:subPropertyOf rank: 1000 is_a: related_to domain: NamedThing multivalued: true inherited: true alias: subclass_of owner: DataSubstrate domain_of: - NamedThing range: NamedThing related_to: name: related_to description: A relationship that is asserted between two named things. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 domain: NamedThing multivalued: true inherited: true alias: related_to owner: DataSubstrate domain_of: - NamedThing - Organization symmetric: true range: NamedThing contributor_name: name: contributor_name description: The name of the person who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_name owner: DataSubstrate domain_of: - NamedThing range: string contributor_github_name: name: contributor_github_name description: The name of the github user who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_github_name owner: DataSubstrate domain_of: - NamedThing range: string contributor_orcid: name: contributor_orcid description: The ORCiD of the person who added this node. examples: - value: ORCID:0000-0001-1234-5678 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_orcid owner: DataSubstrate domain_of: - NamedThing range: uriorcurie contribution_date: name: contribution_date description: The date on which the node was added. examples: - value: '2023-03-20' from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contribution_date owner: DataSubstrate domain_of: - NamedThing range: date","title":"Induced"},{"location":"DataSubstrateContainer/","text":"Class: DataSubstrateContainer A container for DataSubstrates. URI: https://w3id.org/bridge2ai/standards-schema-all/:DataSubstrateContainer classDiagram class DataSubstrateContainer DataSubstrateContainer : data_substrates_collection DataSubstrateContainer ..> DataSubstrate : data_substrates_collection Slots Name Cardinality and Range Description Inheritance data_substrates_collection 0..* DataSubstrate Collection of associated data substrates direct Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all Mappings Mapping Type Mapped Value self https://w3id.org/bridge2ai/standards-schema-all/:DataSubstrateContainer native https://w3id.org/bridge2ai/standards-schema-all/:DataSubstrateContainer LinkML Source Direct name: DataSubstrateContainer description: A container for DataSubstrates. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slots: - data_substrates_collection Induced name: DataSubstrateContainer description: A container for DataSubstrates. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 attributes: data_substrates_collection: name: data_substrates_collection description: Collection of associated data substrates from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 multivalued: true alias: data_substrates_collection owner: DataSubstrateContainer domain_of: - DataSubstrateContainer range: DataSubstrate inlined: true inlined_as_list: true","title":"Class: DataSubstrateContainer"},{"location":"DataSubstrateContainer/#class-datasubstratecontainer","text":"A container for DataSubstrates. URI: https://w3id.org/bridge2ai/standards-schema-all/:DataSubstrateContainer classDiagram class DataSubstrateContainer DataSubstrateContainer : data_substrates_collection DataSubstrateContainer ..> DataSubstrate : data_substrates_collection","title":"Class: DataSubstrateContainer"},{"location":"DataSubstrateContainer/#slots","text":"Name Cardinality and Range Description Inheritance data_substrates_collection 0..* DataSubstrate Collection of associated data substrates direct","title":"Slots"},{"location":"DataSubstrateContainer/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"DataSubstrateContainer/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"DataSubstrateContainer/#mappings","text":"Mapping Type Mapped Value self https://w3id.org/bridge2ai/standards-schema-all/:DataSubstrateContainer native https://w3id.org/bridge2ai/standards-schema-all/:DataSubstrateContainer","title":"Mappings"},{"location":"DataSubstrateContainer/#linkml-source","text":"","title":"LinkML Source"},{"location":"DataSubstrateContainer/#direct","text":"name: DataSubstrateContainer description: A container for DataSubstrates. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slots: - data_substrates_collection","title":"Direct"},{"location":"DataSubstrateContainer/#induced","text":"name: DataSubstrateContainer description: A container for DataSubstrates. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 attributes: data_substrates_collection: name: data_substrates_collection description: Collection of associated data substrates from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 multivalued: true alias: data_substrates_collection owner: DataSubstrateContainer domain_of: - DataSubstrateContainer range: DataSubstrate inlined: true inlined_as_list: true","title":"Induced"},{"location":"DataTopic/","text":"Class: DataTopic Represents a general data topic for Bridge2AI data or the tools/standards applied to the data. URI: https://w3id.org/bridge2ai/standards-schema-all/:DataTopic classDiagram class DataTopic NamedThing <|-- DataTopic DataTopic : category DataTopic : contribution_date DataTopic : contributor_github_name DataTopic : contributor_name DataTopic : contributor_orcid DataTopic : description DataTopic : edam_id DataTopic : id DataTopic : mesh_id DataTopic : name DataTopic : ncit_id DataTopic : related_to DataTopic ..> NamedThing : related_to DataTopic : subclass_of DataTopic ..> NamedThing : subclass_of DataTopic : topic_involves_anatomy DataTopic ..> AnatomicalEntity : topic_involves_anatomy Inheritance NamedThing DataTopic Slots Name Cardinality and Range Description Inheritance edam_id 0..1 EdamIdentifier Unique EDAM identifier direct mesh_id 0..1 MeshIdentifier Unique MeSH identifier direct ncit_id 0..1 NcitIdentifier Unique NCIt Identifier direct topic_involves_anatomy 0..* AnatomicalEntity A relationship between a DataTopic and an anatomical entity direct id 1..1 Uriorcurie A unique identifier for a thing NamedThing category 0..1 CategoryType Name of the high level ontology class in which this entity is categorized NamedThing name 0..1 String A human-readable name for a thing NamedThing description 0..1 String A human-readable description for a thing NamedThing subclass_of 0..* NamedThing Holds between two classes where the domain class is a specialization of the r... NamedThing related_to 0..* NamedThing A relationship that is asserted between two named things NamedThing contributor_name 0..1 String The name of the person who added this node NamedThing contributor_github_name 0..1 String The name of the github user who added this node NamedThing contributor_orcid 0..1 Uriorcurie The ORCiD of the person who added this node NamedThing contribution_date 0..1 Date The date on which the node was added NamedThing Usages used by used in type used UseCase data_topics range DataTopic DataStandardOrTool concerns_data_topic range DataTopic DataStandard concerns_data_topic range DataTopic BiomedicalStandard concerns_data_topic range DataTopic Registry concerns_data_topic range DataTopic OntologyOrVocabulary concerns_data_topic range DataTopic ModelRepository concerns_data_topic range DataTopic ReferenceDataOrDataset concerns_data_topic range DataTopic SoftwareOrTool concerns_data_topic range DataTopic ReferenceImplementation concerns_data_topic range DataTopic TrainingProgram concerns_data_topic range DataTopic DataTopic topic_involves_anatomy domain DataTopic DataTopicContainer data_topics_collection range DataTopic Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all Mappings Mapping Type Mapped Value self https://w3id.org/bridge2ai/standards-schema-all/:DataTopic native https://w3id.org/bridge2ai/standards-schema-all/:DataTopic LinkML Source Direct name: DataTopic description: Represents a general data topic for Bridge2AI data or the tools/standards applied to the data. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: NamedThing slots: - edam_id - mesh_id - ncit_id - topic_involves_anatomy Induced name: DataTopic description: Represents a general data topic for Bridge2AI data or the tools/standards applied to the data. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: NamedThing attributes: edam_id: name: edam_id description: Unique EDAM identifier examples: - value: edam.data:0006 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 values_from: - edam.data - edam.format - edam.operation - edam.topic alias: edam_id owner: DataTopic domain_of: - DataTopic - DataSubstrate range: edam_identifier mesh_id: name: mesh_id description: Unique MeSH identifier examples: - value: MeSH:D014831 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 values_from: - MeSH alias: mesh_id owner: DataTopic domain_of: - DataTopic - DataSubstrate range: mesh_identifier ncit_id: name: ncit_id description: Unique NCIt Identifier examples: - value: NCIT:C92692 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 values_from: - NCIT alias: ncit_id owner: DataTopic domain_of: - DataTopic - DataSubstrate range: ncit_identifier topic_involves_anatomy: name: topic_involves_anatomy description: A relationship between a DataTopic and an anatomical entity. from_schema: https://w3id.org/bridge2ai/standards-schema-all exact_mappings: - RO:0004026 rank: 1000 is_a: related_to domain: DataTopic multivalued: true inherited: true alias: topic_involves_anatomy owner: DataTopic domain_of: - DataTopic range: AnatomicalEntity id: name: id description: A unique identifier for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:identifier identifier: true alias: id owner: DataTopic domain_of: - NamedThing range: uriorcurie required: true category: name: category description: Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\". from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: type domain: NamedThing designates_type: true alias: category owner: DataTopic domain_of: - NamedThing range: category_type name: name: name description: A human-readable name for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:name alias: name owner: DataTopic domain_of: - NamedThing range: string description: name: description description: A human-readable description for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:description alias: description owner: DataTopic domain_of: - NamedThing range: string subclass_of: name: subclass_of description: Holds between two classes where the domain class is a specialization of the range class. from_schema: https://w3id.org/bridge2ai/standards-schema-all exact_mappings: - rdfs:subClassOf - MESH:isa narrow_mappings: - rdfs:subPropertyOf rank: 1000 is_a: related_to domain: NamedThing multivalued: true inherited: true alias: subclass_of owner: DataTopic domain_of: - NamedThing range: NamedThing related_to: name: related_to description: A relationship that is asserted between two named things. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 domain: NamedThing multivalued: true inherited: true alias: related_to owner: DataTopic domain_of: - NamedThing - Organization symmetric: true range: NamedThing contributor_name: name: contributor_name description: The name of the person who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_name owner: DataTopic domain_of: - NamedThing range: string contributor_github_name: name: contributor_github_name description: The name of the github user who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_github_name owner: DataTopic domain_of: - NamedThing range: string contributor_orcid: name: contributor_orcid description: The ORCiD of the person who added this node. examples: - value: ORCID:0000-0001-1234-5678 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_orcid owner: DataTopic domain_of: - NamedThing range: uriorcurie contribution_date: name: contribution_date description: The date on which the node was added. examples: - value: '2023-03-20' from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contribution_date owner: DataTopic domain_of: - NamedThing range: date","title":"Class: DataTopic"},{"location":"DataTopic/#class-datatopic","text":"Represents a general data topic for Bridge2AI data or the tools/standards applied to the data. URI: https://w3id.org/bridge2ai/standards-schema-all/:DataTopic classDiagram class DataTopic NamedThing <|-- DataTopic DataTopic : category DataTopic : contribution_date DataTopic : contributor_github_name DataTopic : contributor_name DataTopic : contributor_orcid DataTopic : description DataTopic : edam_id DataTopic : id DataTopic : mesh_id DataTopic : name DataTopic : ncit_id DataTopic : related_to DataTopic ..> NamedThing : related_to DataTopic : subclass_of DataTopic ..> NamedThing : subclass_of DataTopic : topic_involves_anatomy DataTopic ..> AnatomicalEntity : topic_involves_anatomy","title":"Class: DataTopic"},{"location":"DataTopic/#inheritance","text":"NamedThing DataTopic","title":"Inheritance"},{"location":"DataTopic/#slots","text":"Name Cardinality and Range Description Inheritance edam_id 0..1 EdamIdentifier Unique EDAM identifier direct mesh_id 0..1 MeshIdentifier Unique MeSH identifier direct ncit_id 0..1 NcitIdentifier Unique NCIt Identifier direct topic_involves_anatomy 0..* AnatomicalEntity A relationship between a DataTopic and an anatomical entity direct id 1..1 Uriorcurie A unique identifier for a thing NamedThing category 0..1 CategoryType Name of the high level ontology class in which this entity is categorized NamedThing name 0..1 String A human-readable name for a thing NamedThing description 0..1 String A human-readable description for a thing NamedThing subclass_of 0..* NamedThing Holds between two classes where the domain class is a specialization of the r... NamedThing related_to 0..* NamedThing A relationship that is asserted between two named things NamedThing contributor_name 0..1 String The name of the person who added this node NamedThing contributor_github_name 0..1 String The name of the github user who added this node NamedThing contributor_orcid 0..1 Uriorcurie The ORCiD of the person who added this node NamedThing contribution_date 0..1 Date The date on which the node was added NamedThing","title":"Slots"},{"location":"DataTopic/#usages","text":"used by used in type used UseCase data_topics range DataTopic DataStandardOrTool concerns_data_topic range DataTopic DataStandard concerns_data_topic range DataTopic BiomedicalStandard concerns_data_topic range DataTopic Registry concerns_data_topic range DataTopic OntologyOrVocabulary concerns_data_topic range DataTopic ModelRepository concerns_data_topic range DataTopic ReferenceDataOrDataset concerns_data_topic range DataTopic SoftwareOrTool concerns_data_topic range DataTopic ReferenceImplementation concerns_data_topic range DataTopic TrainingProgram concerns_data_topic range DataTopic DataTopic topic_involves_anatomy domain DataTopic DataTopicContainer data_topics_collection range DataTopic","title":"Usages"},{"location":"DataTopic/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"DataTopic/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"DataTopic/#mappings","text":"Mapping Type Mapped Value self https://w3id.org/bridge2ai/standards-schema-all/:DataTopic native https://w3id.org/bridge2ai/standards-schema-all/:DataTopic","title":"Mappings"},{"location":"DataTopic/#linkml-source","text":"","title":"LinkML Source"},{"location":"DataTopic/#direct","text":"name: DataTopic description: Represents a general data topic for Bridge2AI data or the tools/standards applied to the data. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: NamedThing slots: - edam_id - mesh_id - ncit_id - topic_involves_anatomy","title":"Direct"},{"location":"DataTopic/#induced","text":"name: DataTopic description: Represents a general data topic for Bridge2AI data or the tools/standards applied to the data. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: NamedThing attributes: edam_id: name: edam_id description: Unique EDAM identifier examples: - value: edam.data:0006 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 values_from: - edam.data - edam.format - edam.operation - edam.topic alias: edam_id owner: DataTopic domain_of: - DataTopic - DataSubstrate range: edam_identifier mesh_id: name: mesh_id description: Unique MeSH identifier examples: - value: MeSH:D014831 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 values_from: - MeSH alias: mesh_id owner: DataTopic domain_of: - DataTopic - DataSubstrate range: mesh_identifier ncit_id: name: ncit_id description: Unique NCIt Identifier examples: - value: NCIT:C92692 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 values_from: - NCIT alias: ncit_id owner: DataTopic domain_of: - DataTopic - DataSubstrate range: ncit_identifier topic_involves_anatomy: name: topic_involves_anatomy description: A relationship between a DataTopic and an anatomical entity. from_schema: https://w3id.org/bridge2ai/standards-schema-all exact_mappings: - RO:0004026 rank: 1000 is_a: related_to domain: DataTopic multivalued: true inherited: true alias: topic_involves_anatomy owner: DataTopic domain_of: - DataTopic range: AnatomicalEntity id: name: id description: A unique identifier for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:identifier identifier: true alias: id owner: DataTopic domain_of: - NamedThing range: uriorcurie required: true category: name: category description: Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\". from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: type domain: NamedThing designates_type: true alias: category owner: DataTopic domain_of: - NamedThing range: category_type name: name: name description: A human-readable name for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:name alias: name owner: DataTopic domain_of: - NamedThing range: string description: name: description description: A human-readable description for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:description alias: description owner: DataTopic domain_of: - NamedThing range: string subclass_of: name: subclass_of description: Holds between two classes where the domain class is a specialization of the range class. from_schema: https://w3id.org/bridge2ai/standards-schema-all exact_mappings: - rdfs:subClassOf - MESH:isa narrow_mappings: - rdfs:subPropertyOf rank: 1000 is_a: related_to domain: NamedThing multivalued: true inherited: true alias: subclass_of owner: DataTopic domain_of: - NamedThing range: NamedThing related_to: name: related_to description: A relationship that is asserted between two named things. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 domain: NamedThing multivalued: true inherited: true alias: related_to owner: DataTopic domain_of: - NamedThing - Organization symmetric: true range: NamedThing contributor_name: name: contributor_name description: The name of the person who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_name owner: DataTopic domain_of: - NamedThing range: string contributor_github_name: name: contributor_github_name description: The name of the github user who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_github_name owner: DataTopic domain_of: - NamedThing range: string contributor_orcid: name: contributor_orcid description: The ORCiD of the person who added this node. examples: - value: ORCID:0000-0001-1234-5678 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_orcid owner: DataTopic domain_of: - NamedThing range: uriorcurie contribution_date: name: contribution_date description: The date on which the node was added. examples: - value: '2023-03-20' from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contribution_date owner: DataTopic domain_of: - NamedThing range: date","title":"Induced"},{"location":"DataTopicContainer/","text":"Class: DataTopicContainer A container for DataTopics. URI: https://w3id.org/bridge2ai/standards-schema-all/:DataTopicContainer classDiagram class DataTopicContainer DataTopicContainer : data_topics_collection DataTopicContainer ..> DataTopic : data_topics_collection Slots Name Cardinality and Range Description Inheritance data_topics_collection 0..* DataTopic Collection of associated data topics direct Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all Mappings Mapping Type Mapped Value self https://w3id.org/bridge2ai/standards-schema-all/:DataTopicContainer native https://w3id.org/bridge2ai/standards-schema-all/:DataTopicContainer LinkML Source Direct name: DataTopicContainer description: A container for DataTopics. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slots: - data_topics_collection Induced name: DataTopicContainer description: A container for DataTopics. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 attributes: data_topics_collection: name: data_topics_collection description: Collection of associated data topics. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 multivalued: true alias: data_topics_collection owner: DataTopicContainer domain_of: - DataTopicContainer range: DataTopic inlined: true inlined_as_list: true","title":"Class: DataTopicContainer"},{"location":"DataTopicContainer/#class-datatopiccontainer","text":"A container for DataTopics. URI: https://w3id.org/bridge2ai/standards-schema-all/:DataTopicContainer classDiagram class DataTopicContainer DataTopicContainer : data_topics_collection DataTopicContainer ..> DataTopic : data_topics_collection","title":"Class: DataTopicContainer"},{"location":"DataTopicContainer/#slots","text":"Name Cardinality and Range Description Inheritance data_topics_collection 0..* DataTopic Collection of associated data topics direct","title":"Slots"},{"location":"DataTopicContainer/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"DataTopicContainer/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"DataTopicContainer/#mappings","text":"Mapping Type Mapped Value self https://w3id.org/bridge2ai/standards-schema-all/:DataTopicContainer native https://w3id.org/bridge2ai/standards-schema-all/:DataTopicContainer","title":"Mappings"},{"location":"DataTopicContainer/#linkml-source","text":"","title":"LinkML Source"},{"location":"DataTopicContainer/#direct","text":"name: DataTopicContainer description: A container for DataTopics. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slots: - data_topics_collection","title":"Direct"},{"location":"DataTopicContainer/#induced","text":"name: DataTopicContainer description: A container for DataTopics. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 attributes: data_topics_collection: name: data_topics_collection description: Collection of associated data topics. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 multivalued: true alias: data_topics_collection owner: DataTopicContainer domain_of: - DataTopicContainer range: DataTopic inlined: true inlined_as_list: true","title":"Induced"},{"location":"Date/","text":"Type: Date a date (year, month and day) in an idealized calendar URI: xsd:date base : XSDDate uri : xsd:date repr : str Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Type: Date"},{"location":"Date/#type-date","text":"a date (year, month and day) in an idealized calendar URI: xsd:date base : XSDDate uri : xsd:date repr : str","title":"Type: Date"},{"location":"Date/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Date/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"DateOrDatetime/","text":"Type: DateOrDatetime Either a date or a datetime URI: linkml:DateOrDatetime base : str uri : linkml:DateOrDatetime repr : str Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Type: DateOrDatetime"},{"location":"DateOrDatetime/#type-dateordatetime","text":"Either a date or a datetime URI: linkml:DateOrDatetime base : str uri : linkml:DateOrDatetime repr : str","title":"Type: DateOrDatetime"},{"location":"DateOrDatetime/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"DateOrDatetime/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"Datetime/","text":"Type: Datetime The combination of a date and time URI: xsd:dateTime base : XSDDateTime uri : xsd:dateTime repr : str Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Type: Datetime"},{"location":"Datetime/#type-datetime","text":"The combination of a date and time URI: xsd:dateTime base : XSDDateTime uri : xsd:dateTime repr : str","title":"Type: Datetime"},{"location":"Datetime/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Datetime/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"Decimal/","text":"Type: Decimal A real number with arbitrary precision that conforms to the xsd:decimal specification URI: xsd:decimal base : Decimal uri : xsd:decimal Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Type: Decimal"},{"location":"Decimal/#type-decimal","text":"A real number with arbitrary precision that conforms to the xsd:decimal specification URI: xsd:decimal base : Decimal uri : xsd:decimal","title":"Type: Decimal"},{"location":"Decimal/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Decimal/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"Double/","text":"Type: Double A real number that conforms to the xsd:double specification URI: xsd:double base : float uri : xsd:double Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Type: Double"},{"location":"Double/#type-double","text":"A real number that conforms to the xsd:double specification URI: xsd:double base : float uri : xsd:double","title":"Type: Double"},{"location":"Double/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Double/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"EDAM_ID/","text":"Slot: EDAM_ID URI: STANDARDS:EDAM_ID Applicable Classes Name Description DataTopic Represents a general data topic for Bridge2AI data or the tools/standards app... DataSubstrate Represents a data substrate for Bridge2AI data Properties Range: EdamIdentifier Examples Value edam.data:0006 Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema LinkML Source name: EDAM_ID examples: - value: edam.data:0006 from_schema: https://w3id.org/bridge2ai/standards-schema rank: 1000 values_from: - edam.data - edam.format - edam.operation - edam.topic alias: EDAM_ID domain_of: - DataTopic - DataSubstrate range: edam identifier","title":"Slot: EDAM_ID"},{"location":"EDAM_ID/#slot-edam_id","text":"URI: STANDARDS:EDAM_ID","title":"Slot: EDAM_ID"},{"location":"EDAM_ID/#applicable-classes","text":"Name Description DataTopic Represents a general data topic for Bridge2AI data or the tools/standards app... DataSubstrate Represents a data substrate for Bridge2AI data","title":"Applicable Classes"},{"location":"EDAM_ID/#properties","text":"Range: EdamIdentifier","title":"Properties"},{"location":"EDAM_ID/#examples","text":"Value edam.data:0006","title":"Examples"},{"location":"EDAM_ID/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"EDAM_ID/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema","title":"Schema Source"},{"location":"EDAM_ID/#linkml-source","text":"name: EDAM_ID examples: - value: edam.data:0006 from_schema: https://w3id.org/bridge2ai/standards-schema rank: 1000 values_from: - edam.data - edam.format - edam.operation - edam.topic alias: EDAM_ID domain_of: - DataTopic - DataSubstrate range: edam identifier","title":"LinkML Source"},{"location":"EdamIdentifier/","text":"Type: EdamIdentifier Identifier from EDAM ontology URI: xsd:anyURI base : URIorCURIE uri : xsd:anyURI repr : str typeof : uriorcurie Identifier and Mapping Information Valid ID Prefixes Instances of this class should have identifiers with one of the following prefixes: edam.data edam.format edam.operation edam.topic Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Type: EdamIdentifier"},{"location":"EdamIdentifier/#type-edamidentifier","text":"Identifier from EDAM ontology URI: xsd:anyURI base : URIorCURIE uri : xsd:anyURI repr : str typeof : uriorcurie","title":"Type: EdamIdentifier"},{"location":"EdamIdentifier/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"EdamIdentifier/#valid-id-prefixes","text":"Instances of this class should have identifiers with one of the following prefixes: edam.data edam.format edam.operation edam.topic","title":"Valid ID Prefixes"},{"location":"EdamIdentifier/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"Float/","text":"Type: Float A real number that conforms to the xsd:float specification URI: xsd:float base : float uri : xsd:float Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Type: Float"},{"location":"Float/#type-float","text":"A real number that conforms to the xsd:float specification URI: xsd:float base : float uri : xsd:float","title":"Type: Float"},{"location":"Float/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Float/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"Integer/","text":"Type: Integer An integer URI: xsd:integer base : int uri : xsd:integer Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Type: Integer"},{"location":"Integer/#type-integer","text":"An integer URI: xsd:integer base : int uri : xsd:integer","title":"Type: Integer"},{"location":"Integer/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Integer/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"MESH_ID/","text":"Slot: MESH_ID URI: STANDARDS:MESH_ID Applicable Classes Name Description DataTopic Represents a general data topic for Bridge2AI data or the tools/standards app... DataSubstrate Represents a data substrate for Bridge2AI data Properties Range: MeshIdentifier Examples Value MeSH:D014831 Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema LinkML Source name: MESH_ID examples: - value: MeSH:D014831 from_schema: https://w3id.org/bridge2ai/standards-schema rank: 1000 values_from: - MeSH alias: MESH_ID domain_of: - DataTopic - DataSubstrate range: mesh identifier","title":"Slot: MESH_ID"},{"location":"MESH_ID/#slot-mesh_id","text":"URI: STANDARDS:MESH_ID","title":"Slot: MESH_ID"},{"location":"MESH_ID/#applicable-classes","text":"Name Description DataTopic Represents a general data topic for Bridge2AI data or the tools/standards app... DataSubstrate Represents a data substrate for Bridge2AI data","title":"Applicable Classes"},{"location":"MESH_ID/#properties","text":"Range: MeshIdentifier","title":"Properties"},{"location":"MESH_ID/#examples","text":"Value MeSH:D014831","title":"Examples"},{"location":"MESH_ID/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"MESH_ID/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema","title":"Schema Source"},{"location":"MESH_ID/#linkml-source","text":"name: MESH_ID examples: - value: MeSH:D014831 from_schema: https://w3id.org/bridge2ai/standards-schema rank: 1000 values_from: - MeSH alias: MESH_ID domain_of: - DataTopic - DataSubstrate range: mesh identifier","title":"LinkML Source"},{"location":"MeSH_ID/","text":"Slot: MeSH_ID URI: STANDARDS:MeSH_ID Applicable Classes Name Description DataTopic Represents a general data topic for Bridge2AI data or the tools/standards app... DataSubstrate Represents a data substrate for Bridge2AI data Properties Range: MeshIdentifier Examples Value MeSH:D014831 Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema LinkML Source name: MeSH_ID examples: - value: MeSH:D014831 from_schema: https://w3id.org/bridge2ai/standards-schema rank: 1000 values_from: - MeSH alias: MeSH_ID domain_of: - DataTopic - DataSubstrate range: mesh identifier","title":"Slot: MeSH_ID"},{"location":"MeSH_ID/#slot-mesh_id","text":"URI: STANDARDS:MeSH_ID","title":"Slot: MeSH_ID"},{"location":"MeSH_ID/#applicable-classes","text":"Name Description DataTopic Represents a general data topic for Bridge2AI data or the tools/standards app... DataSubstrate Represents a data substrate for Bridge2AI data","title":"Applicable Classes"},{"location":"MeSH_ID/#properties","text":"Range: MeshIdentifier","title":"Properties"},{"location":"MeSH_ID/#examples","text":"Value MeSH:D014831","title":"Examples"},{"location":"MeSH_ID/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"MeSH_ID/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema","title":"Schema Source"},{"location":"MeSH_ID/#linkml-source","text":"name: MeSH_ID examples: - value: MeSH:D014831 from_schema: https://w3id.org/bridge2ai/standards-schema rank: 1000 values_from: - MeSH alias: MeSH_ID domain_of: - DataTopic - DataSubstrate range: mesh identifier","title":"LinkML Source"},{"location":"MeshIdentifier/","text":"Type: MeshIdentifier Identifier from Medical Subject Headings (MeSH) biomedical vocabulary. URI: xsd:anyURI base : URIorCURIE uri : xsd:anyURI repr : str typeof : uriorcurie Identifier and Mapping Information Valid ID Prefixes Instances of this class should have identifiers with one of the following prefixes: mesh Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Type: MeshIdentifier"},{"location":"MeshIdentifier/#type-meshidentifier","text":"Identifier from Medical Subject Headings (MeSH) biomedical vocabulary. URI: xsd:anyURI base : URIorCURIE uri : xsd:anyURI repr : str typeof : uriorcurie","title":"Type: MeshIdentifier"},{"location":"MeshIdentifier/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"MeshIdentifier/#valid-id-prefixes","text":"Instances of this class should have identifiers with one of the following prefixes: mesh","title":"Valid ID Prefixes"},{"location":"MeshIdentifier/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"ModelRepository/","text":"Class: ModelRepository Represents a resource in the Bridge2AI Standards Registry serving to curate and store computational models. To be a respository, the resource must not index models alone. URI: https://w3id.org/bridge2ai/standards-schema-all/:ModelRepository classDiagram class ModelRepository DataStandardOrTool <|-- ModelRepository ModelRepository : category ModelRepository : collection ModelRepository ..> StandardsCollectionTag : collection ModelRepository : concerns_data_topic ModelRepository ..> DataTopic : concerns_data_topic ModelRepository : contribution_date ModelRepository : contributor_github_name ModelRepository : contributor_name ModelRepository : contributor_orcid ModelRepository : description ModelRepository : formal_specification ModelRepository : has_relevant_organization ModelRepository ..> Organization : has_relevant_organization ModelRepository : id ModelRepository : is_open ModelRepository : name ModelRepository : not_relevant_to_dgps ModelRepository : publication ModelRepository : purpose_detail ModelRepository : related_to ModelRepository ..> NamedThing : related_to ModelRepository : requires_registration ModelRepository : subclass_of ModelRepository ..> NamedThing : subclass_of ModelRepository : url Inheritance NamedThing DataStandardOrTool ModelRepository Slots Name Cardinality and Range Description Inheritance collection 0..* StandardsCollectionTag Tags for specific sets of standards DataStandardOrTool concerns_data_topic 0..* DataTopic Subject standard is generally applied in the context of object data topic DataStandardOrTool has_relevant_organization 0..* Organization Subject standard is managed or otherwise guided buy the object organization(s... DataStandardOrTool purpose_detail 0..1 String Text description of the standard or tool DataStandardOrTool is_open 0..1 Boolean Is the standard or tool FAIR and available free of cost? DataStandardOrTool requires_registration 0..1 Boolean Does usage of the standard or tool require registrion of a user or group with... DataStandardOrTool url 0..1 Uriorcurie URL for basic documentation of the standard or tool DataStandardOrTool publication 0..1 Uriorcurie Relevant publication for the standard or tool DataStandardOrTool formal_specification 0..1 Uriorcurie Relevant code repository or other location for a formal specification of the ... DataStandardOrTool not_relevant_to_dgps 0..1 Boolean Is the standard or tool currently relevant to DGPs? DataStandardOrTool id 1..1 Uriorcurie A unique identifier for a thing NamedThing category 0..1 CategoryType Name of the high level ontology class in which this entity is categorized NamedThing name 0..1 String A human-readable name for a thing NamedThing description 0..1 String A human-readable description for a thing NamedThing subclass_of 0..* NamedThing Holds between two classes where the domain class is a specialization of the r... NamedThing related_to 0..* NamedThing A relationship that is asserted between two named things NamedThing contributor_name 0..1 String The name of the person who added this node NamedThing contributor_github_name 0..1 String The name of the github user who added this node NamedThing contributor_orcid 0..1 Uriorcurie The ORCiD of the person who added this node NamedThing contribution_date 0..1 Date The date on which the node was added NamedThing Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all Mappings Mapping Type Mapped Value self https://w3id.org/bridge2ai/standards-schema-all/:ModelRepository native https://w3id.org/bridge2ai/standards-schema-all/:ModelRepository LinkML Source Direct name: ModelRepository description: Represents a resource in the Bridge2AI Standards Registry serving to curate and store computational models. To be a respository, the resource must not index models alone. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: DataStandardOrTool Induced name: ModelRepository description: Represents a resource in the Bridge2AI Standards Registry serving to curate and store computational models. To be a respository, the resource must not index models alone. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: DataStandardOrTool attributes: collection: name: collection description: Tags for specific sets of standards. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing multivalued: true alias: collection owner: ModelRepository domain_of: - DataStandardOrTool range: StandardsCollectionTag concerns_data_topic: name: concerns_data_topic description: Subject standard is generally applied in the context of object data topic. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: related_to domain: DataStandardOrTool multivalued: true inherited: true alias: concerns_data_topic owner: ModelRepository domain_of: - DataStandardOrTool range: DataTopic has_relevant_organization: name: has_relevant_organization description: Subject standard is managed or otherwise guided buy the object organization(s). from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: related_to domain: DataStandardOrTool multivalued: true inherited: true alias: has_relevant_organization owner: ModelRepository domain_of: - DataStandardOrTool range: Organization purpose_detail: name: purpose_detail description: Text description of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: purpose_detail owner: ModelRepository domain_of: - DataStandardOrTool range: string is_open: name: is_open description: Is the standard or tool FAIR and available free of cost? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: is_open owner: ModelRepository domain_of: - DataStandardOrTool range: boolean requires_registration: name: requires_registration description: Does usage of the standard or tool require registrion of a user or group with some organization or managerial body? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: requires_registration owner: ModelRepository domain_of: - DataStandardOrTool range: boolean url: name: url description: URL for basic documentation of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: url owner: ModelRepository domain_of: - DataStandardOrTool - Organization range: uriorcurie publication: name: publication description: Relevant publication for the standard or tool. Prefer a DOI or PUBMED. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: publication owner: ModelRepository domain_of: - DataStandardOrTool range: uriorcurie formal_specification: name: formal_specification description: Relevant code repository or other location for a formal specification of the standard or tool. Often a URL, particularly to a Git repository. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: formal_specification owner: ModelRepository domain_of: - DataStandardOrTool range: uriorcurie not_relevant_to_dgps: name: not_relevant_to_dgps description: Is the standard or tool currently relevant to DGPs? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: not_relevant_to_dgps owner: ModelRepository domain_of: - DataStandardOrTool range: boolean id: name: id description: A unique identifier for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:identifier identifier: true alias: id owner: ModelRepository domain_of: - NamedThing range: uriorcurie required: true category: name: category description: Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\". from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: type domain: NamedThing designates_type: true alias: category owner: ModelRepository domain_of: - NamedThing range: category_type name: name: name description: A human-readable name for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:name alias: name owner: ModelRepository domain_of: - NamedThing range: string description: name: description description: A human-readable description for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:description alias: description owner: ModelRepository domain_of: - NamedThing range: string subclass_of: name: subclass_of description: Holds between two classes where the domain class is a specialization of the range class. from_schema: https://w3id.org/bridge2ai/standards-schema-all exact_mappings: - rdfs:subClassOf - MESH:isa narrow_mappings: - rdfs:subPropertyOf rank: 1000 is_a: related_to domain: NamedThing multivalued: true inherited: true alias: subclass_of owner: ModelRepository domain_of: - NamedThing range: NamedThing related_to: name: related_to description: A relationship that is asserted between two named things. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 domain: NamedThing multivalued: true inherited: true alias: related_to owner: ModelRepository domain_of: - NamedThing - Organization symmetric: true range: NamedThing contributor_name: name: contributor_name description: The name of the person who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_name owner: ModelRepository domain_of: - NamedThing range: string contributor_github_name: name: contributor_github_name description: The name of the github user who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_github_name owner: ModelRepository domain_of: - NamedThing range: string contributor_orcid: name: contributor_orcid description: The ORCiD of the person who added this node. examples: - value: ORCID:0000-0001-1234-5678 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_orcid owner: ModelRepository domain_of: - NamedThing range: uriorcurie contribution_date: name: contribution_date description: The date on which the node was added. examples: - value: '2023-03-20' from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contribution_date owner: ModelRepository domain_of: - NamedThing range: date","title":"Class: ModelRepository"},{"location":"ModelRepository/#class-modelrepository","text":"Represents a resource in the Bridge2AI Standards Registry serving to curate and store computational models. To be a respository, the resource must not index models alone. URI: https://w3id.org/bridge2ai/standards-schema-all/:ModelRepository classDiagram class ModelRepository DataStandardOrTool <|-- ModelRepository ModelRepository : category ModelRepository : collection ModelRepository ..> StandardsCollectionTag : collection ModelRepository : concerns_data_topic ModelRepository ..> DataTopic : concerns_data_topic ModelRepository : contribution_date ModelRepository : contributor_github_name ModelRepository : contributor_name ModelRepository : contributor_orcid ModelRepository : description ModelRepository : formal_specification ModelRepository : has_relevant_organization ModelRepository ..> Organization : has_relevant_organization ModelRepository : id ModelRepository : is_open ModelRepository : name ModelRepository : not_relevant_to_dgps ModelRepository : publication ModelRepository : purpose_detail ModelRepository : related_to ModelRepository ..> NamedThing : related_to ModelRepository : requires_registration ModelRepository : subclass_of ModelRepository ..> NamedThing : subclass_of ModelRepository : url","title":"Class: ModelRepository"},{"location":"ModelRepository/#inheritance","text":"NamedThing DataStandardOrTool ModelRepository","title":"Inheritance"},{"location":"ModelRepository/#slots","text":"Name Cardinality and Range Description Inheritance collection 0..* StandardsCollectionTag Tags for specific sets of standards DataStandardOrTool concerns_data_topic 0..* DataTopic Subject standard is generally applied in the context of object data topic DataStandardOrTool has_relevant_organization 0..* Organization Subject standard is managed or otherwise guided buy the object organization(s... DataStandardOrTool purpose_detail 0..1 String Text description of the standard or tool DataStandardOrTool is_open 0..1 Boolean Is the standard or tool FAIR and available free of cost? DataStandardOrTool requires_registration 0..1 Boolean Does usage of the standard or tool require registrion of a user or group with... DataStandardOrTool url 0..1 Uriorcurie URL for basic documentation of the standard or tool DataStandardOrTool publication 0..1 Uriorcurie Relevant publication for the standard or tool DataStandardOrTool formal_specification 0..1 Uriorcurie Relevant code repository or other location for a formal specification of the ... DataStandardOrTool not_relevant_to_dgps 0..1 Boolean Is the standard or tool currently relevant to DGPs? DataStandardOrTool id 1..1 Uriorcurie A unique identifier for a thing NamedThing category 0..1 CategoryType Name of the high level ontology class in which this entity is categorized NamedThing name 0..1 String A human-readable name for a thing NamedThing description 0..1 String A human-readable description for a thing NamedThing subclass_of 0..* NamedThing Holds between two classes where the domain class is a specialization of the r... NamedThing related_to 0..* NamedThing A relationship that is asserted between two named things NamedThing contributor_name 0..1 String The name of the person who added this node NamedThing contributor_github_name 0..1 String The name of the github user who added this node NamedThing contributor_orcid 0..1 Uriorcurie The ORCiD of the person who added this node NamedThing contribution_date 0..1 Date The date on which the node was added NamedThing","title":"Slots"},{"location":"ModelRepository/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"ModelRepository/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"ModelRepository/#mappings","text":"Mapping Type Mapped Value self https://w3id.org/bridge2ai/standards-schema-all/:ModelRepository native https://w3id.org/bridge2ai/standards-schema-all/:ModelRepository","title":"Mappings"},{"location":"ModelRepository/#linkml-source","text":"","title":"LinkML Source"},{"location":"ModelRepository/#direct","text":"name: ModelRepository description: Represents a resource in the Bridge2AI Standards Registry serving to curate and store computational models. To be a respository, the resource must not index models alone. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: DataStandardOrTool","title":"Direct"},{"location":"ModelRepository/#induced","text":"name: ModelRepository description: Represents a resource in the Bridge2AI Standards Registry serving to curate and store computational models. To be a respository, the resource must not index models alone. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: DataStandardOrTool attributes: collection: name: collection description: Tags for specific sets of standards. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing multivalued: true alias: collection owner: ModelRepository domain_of: - DataStandardOrTool range: StandardsCollectionTag concerns_data_topic: name: concerns_data_topic description: Subject standard is generally applied in the context of object data topic. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: related_to domain: DataStandardOrTool multivalued: true inherited: true alias: concerns_data_topic owner: ModelRepository domain_of: - DataStandardOrTool range: DataTopic has_relevant_organization: name: has_relevant_organization description: Subject standard is managed or otherwise guided buy the object organization(s). from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: related_to domain: DataStandardOrTool multivalued: true inherited: true alias: has_relevant_organization owner: ModelRepository domain_of: - DataStandardOrTool range: Organization purpose_detail: name: purpose_detail description: Text description of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: purpose_detail owner: ModelRepository domain_of: - DataStandardOrTool range: string is_open: name: is_open description: Is the standard or tool FAIR and available free of cost? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: is_open owner: ModelRepository domain_of: - DataStandardOrTool range: boolean requires_registration: name: requires_registration description: Does usage of the standard or tool require registrion of a user or group with some organization or managerial body? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: requires_registration owner: ModelRepository domain_of: - DataStandardOrTool range: boolean url: name: url description: URL for basic documentation of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: url owner: ModelRepository domain_of: - DataStandardOrTool - Organization range: uriorcurie publication: name: publication description: Relevant publication for the standard or tool. Prefer a DOI or PUBMED. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: publication owner: ModelRepository domain_of: - DataStandardOrTool range: uriorcurie formal_specification: name: formal_specification description: Relevant code repository or other location for a formal specification of the standard or tool. Often a URL, particularly to a Git repository. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: formal_specification owner: ModelRepository domain_of: - DataStandardOrTool range: uriorcurie not_relevant_to_dgps: name: not_relevant_to_dgps description: Is the standard or tool currently relevant to DGPs? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: not_relevant_to_dgps owner: ModelRepository domain_of: - DataStandardOrTool range: boolean id: name: id description: A unique identifier for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:identifier identifier: true alias: id owner: ModelRepository domain_of: - NamedThing range: uriorcurie required: true category: name: category description: Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\". from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: type domain: NamedThing designates_type: true alias: category owner: ModelRepository domain_of: - NamedThing range: category_type name: name: name description: A human-readable name for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:name alias: name owner: ModelRepository domain_of: - NamedThing range: string description: name: description description: A human-readable description for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:description alias: description owner: ModelRepository domain_of: - NamedThing range: string subclass_of: name: subclass_of description: Holds between two classes where the domain class is a specialization of the range class. from_schema: https://w3id.org/bridge2ai/standards-schema-all exact_mappings: - rdfs:subClassOf - MESH:isa narrow_mappings: - rdfs:subPropertyOf rank: 1000 is_a: related_to domain: NamedThing multivalued: true inherited: true alias: subclass_of owner: ModelRepository domain_of: - NamedThing range: NamedThing related_to: name: related_to description: A relationship that is asserted between two named things. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 domain: NamedThing multivalued: true inherited: true alias: related_to owner: ModelRepository domain_of: - NamedThing - Organization symmetric: true range: NamedThing contributor_name: name: contributor_name description: The name of the person who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_name owner: ModelRepository domain_of: - NamedThing range: string contributor_github_name: name: contributor_github_name description: The name of the github user who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_github_name owner: ModelRepository domain_of: - NamedThing range: string contributor_orcid: name: contributor_orcid description: The ORCiD of the person who added this node. examples: - value: ORCID:0000-0001-1234-5678 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_orcid owner: ModelRepository domain_of: - NamedThing range: uriorcurie contribution_date: name: contribution_date description: The date on which the node was added. examples: - value: '2023-03-20' from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contribution_date owner: ModelRepository domain_of: - NamedThing range: date","title":"Induced"},{"location":"NCIT_ID/","text":"Slot: NCIT_ID URI: STANDARDS:NCIT_ID Applicable Classes Name Description DataTopic Represents a general data topic for Bridge2AI data or the tools/standards app... DataSubstrate Represents a data substrate for Bridge2AI data Properties Range: NcitIdentifier Examples Value NCIT:C92692 Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema LinkML Source name: NCIT_ID examples: - value: NCIT:C92692 from_schema: https://w3id.org/bridge2ai/standards-schema rank: 1000 values_from: - NCIT alias: NCIT_ID domain_of: - DataTopic - DataSubstrate range: ncit identifier","title":"Slot: NCIT_ID"},{"location":"NCIT_ID/#slot-ncit_id","text":"URI: STANDARDS:NCIT_ID","title":"Slot: NCIT_ID"},{"location":"NCIT_ID/#applicable-classes","text":"Name Description DataTopic Represents a general data topic for Bridge2AI data or the tools/standards app... DataSubstrate Represents a data substrate for Bridge2AI data","title":"Applicable Classes"},{"location":"NCIT_ID/#properties","text":"Range: NcitIdentifier","title":"Properties"},{"location":"NCIT_ID/#examples","text":"Value NCIT:C92692","title":"Examples"},{"location":"NCIT_ID/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"NCIT_ID/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema","title":"Schema Source"},{"location":"NCIT_ID/#linkml-source","text":"name: NCIT_ID examples: - value: NCIT:C92692 from_schema: https://w3id.org/bridge2ai/standards-schema rank: 1000 values_from: - NCIT alias: NCIT_ID domain_of: - DataTopic - DataSubstrate range: ncit identifier","title":"LinkML Source"},{"location":"NamedThing/","text":"Class: NamedThing A generic grouping for any identifiable entity URI: schema:Thing classDiagram class NamedThing NamedThing <|-- UseCase NamedThing <|-- DataStandardOrTool NamedThing <|-- DataTopic NamedThing <|-- AnatomicalEntity NamedThing <|-- Organization NamedThing <|-- DataSubstrate NamedThing : category NamedThing : contribution_date NamedThing : contributor_github_name NamedThing : contributor_name NamedThing : contributor_orcid NamedThing : description NamedThing : id NamedThing : name NamedThing : related_to NamedThing ..> NamedThing : related_to NamedThing : subclass_of NamedThing ..> NamedThing : subclass_of Inheritance NamedThing UseCase DataStandardOrTool DataTopic AnatomicalEntity Organization DataSubstrate Slots Name Cardinality and Range Description Inheritance id 1..1 Uriorcurie A unique identifier for a thing direct category 0..1 CategoryType Name of the high level ontology class in which this entity is categorized direct name 0..1 String A human-readable name for a thing direct description 0..1 String A human-readable description for a thing direct subclass_of 0..* NamedThing Holds between two classes where the domain class is a specialization of the r... direct related_to 0..* NamedThing A relationship that is asserted between two named things direct contributor_name 0..1 String The name of the person who added this node direct contributor_github_name 0..1 String The name of the github user who added this node direct contributor_orcid 0..1 Uriorcurie The ORCiD of the person who added this node direct contribution_date 0..1 Date The date on which the node was added direct Usages used by used in type used UseCase use_case_category domain NamedThing UseCase known_limitations domain NamedThing UseCase data_topics domain NamedThing UseCase data_substrates domain NamedThing UseCase standards_and_tools_for_dgp_use domain NamedThing UseCase alternative_standards_and_tools domain NamedThing UseCase enables domain NamedThing UseCase involved_in_experimental_design domain NamedThing UseCase involved_in_metadata_management domain NamedThing UseCase involved_in_quality_control domain NamedThing UseCase xref domain NamedThing UseCase category domain NamedThing UseCase subclass_of domain NamedThing UseCase subclass_of range NamedThing UseCase related_to domain NamedThing UseCase related_to range NamedThing UseCase contributor_name domain NamedThing UseCase contributor_github_name domain NamedThing UseCase contributor_orcid domain NamedThing UseCase contribution_date domain NamedThing DataStandardOrTool collection domain NamedThing DataStandardOrTool purpose_detail domain NamedThing DataStandardOrTool is_open domain NamedThing DataStandardOrTool requires_registration domain NamedThing DataStandardOrTool url domain NamedThing DataStandardOrTool publication domain NamedThing DataStandardOrTool formal_specification domain NamedThing DataStandardOrTool not_relevant_to_dgps domain NamedThing DataStandardOrTool category domain NamedThing DataStandardOrTool subclass_of domain NamedThing DataStandardOrTool subclass_of range NamedThing DataStandardOrTool related_to domain NamedThing DataStandardOrTool related_to range NamedThing DataStandardOrTool contributor_name domain NamedThing DataStandardOrTool contributor_github_name domain NamedThing DataStandardOrTool contributor_orcid domain NamedThing DataStandardOrTool contribution_date domain NamedThing DataStandard collection domain NamedThing DataStandard purpose_detail domain NamedThing DataStandard is_open domain NamedThing DataStandard requires_registration domain NamedThing DataStandard url domain NamedThing DataStandard publication domain NamedThing DataStandard formal_specification domain NamedThing DataStandard not_relevant_to_dgps domain NamedThing DataStandard category domain NamedThing DataStandard subclass_of domain NamedThing DataStandard subclass_of range NamedThing DataStandard related_to domain NamedThing DataStandard related_to range NamedThing DataStandard contributor_name domain NamedThing DataStandard contributor_github_name domain NamedThing DataStandard contributor_orcid domain NamedThing DataStandard contribution_date domain NamedThing BiomedicalStandard collection domain NamedThing BiomedicalStandard purpose_detail domain NamedThing BiomedicalStandard is_open domain NamedThing BiomedicalStandard requires_registration domain NamedThing BiomedicalStandard url domain NamedThing BiomedicalStandard publication domain NamedThing BiomedicalStandard formal_specification domain NamedThing BiomedicalStandard not_relevant_to_dgps domain NamedThing BiomedicalStandard category domain NamedThing BiomedicalStandard subclass_of domain NamedThing BiomedicalStandard subclass_of range NamedThing BiomedicalStandard related_to domain NamedThing BiomedicalStandard related_to range NamedThing BiomedicalStandard contributor_name domain NamedThing BiomedicalStandard contributor_github_name domain NamedThing BiomedicalStandard contributor_orcid domain NamedThing BiomedicalStandard contribution_date domain NamedThing Registry collection domain NamedThing Registry purpose_detail domain NamedThing Registry is_open domain NamedThing Registry requires_registration domain NamedThing Registry url domain NamedThing Registry publication domain NamedThing Registry formal_specification domain NamedThing Registry not_relevant_to_dgps domain NamedThing Registry category domain NamedThing Registry subclass_of domain NamedThing Registry subclass_of range NamedThing Registry related_to domain NamedThing Registry related_to range NamedThing Registry contributor_name domain NamedThing Registry contributor_github_name domain NamedThing Registry contributor_orcid domain NamedThing Registry contribution_date domain NamedThing OntologyOrVocabulary collection domain NamedThing OntologyOrVocabulary purpose_detail domain NamedThing OntologyOrVocabulary is_open domain NamedThing OntologyOrVocabulary requires_registration domain NamedThing OntologyOrVocabulary url domain NamedThing OntologyOrVocabulary publication domain NamedThing OntologyOrVocabulary formal_specification domain NamedThing OntologyOrVocabulary not_relevant_to_dgps domain NamedThing OntologyOrVocabulary category domain NamedThing OntologyOrVocabulary subclass_of domain NamedThing OntologyOrVocabulary subclass_of range NamedThing OntologyOrVocabulary related_to domain NamedThing OntologyOrVocabulary related_to range NamedThing OntologyOrVocabulary contributor_name domain NamedThing OntologyOrVocabulary contributor_github_name domain NamedThing OntologyOrVocabulary contributor_orcid domain NamedThing OntologyOrVocabulary contribution_date domain NamedThing ModelRepository collection domain NamedThing ModelRepository purpose_detail domain NamedThing ModelRepository is_open domain NamedThing ModelRepository requires_registration domain NamedThing ModelRepository url domain NamedThing ModelRepository publication domain NamedThing ModelRepository formal_specification domain NamedThing ModelRepository not_relevant_to_dgps domain NamedThing ModelRepository category domain NamedThing ModelRepository subclass_of domain NamedThing ModelRepository subclass_of range NamedThing ModelRepository related_to domain NamedThing ModelRepository related_to range NamedThing ModelRepository contributor_name domain NamedThing ModelRepository contributor_github_name domain NamedThing ModelRepository contributor_orcid domain NamedThing ModelRepository contribution_date domain NamedThing ReferenceDataOrDataset collection domain NamedThing ReferenceDataOrDataset purpose_detail domain NamedThing ReferenceDataOrDataset is_open domain NamedThing ReferenceDataOrDataset requires_registration domain NamedThing ReferenceDataOrDataset url domain NamedThing ReferenceDataOrDataset publication domain NamedThing ReferenceDataOrDataset formal_specification domain NamedThing ReferenceDataOrDataset not_relevant_to_dgps domain NamedThing ReferenceDataOrDataset category domain NamedThing ReferenceDataOrDataset subclass_of domain NamedThing ReferenceDataOrDataset subclass_of range NamedThing ReferenceDataOrDataset related_to domain NamedThing ReferenceDataOrDataset related_to range NamedThing ReferenceDataOrDataset contributor_name domain NamedThing ReferenceDataOrDataset contributor_github_name domain NamedThing ReferenceDataOrDataset contributor_orcid domain NamedThing ReferenceDataOrDataset contribution_date domain NamedThing SoftwareOrTool collection domain NamedThing SoftwareOrTool purpose_detail domain NamedThing SoftwareOrTool is_open domain NamedThing SoftwareOrTool requires_registration domain NamedThing SoftwareOrTool url domain NamedThing SoftwareOrTool publication domain NamedThing SoftwareOrTool formal_specification domain NamedThing SoftwareOrTool not_relevant_to_dgps domain NamedThing SoftwareOrTool category domain NamedThing SoftwareOrTool subclass_of domain NamedThing SoftwareOrTool subclass_of range NamedThing SoftwareOrTool related_to domain NamedThing SoftwareOrTool related_to range NamedThing SoftwareOrTool contributor_name domain NamedThing SoftwareOrTool contributor_github_name domain NamedThing SoftwareOrTool contributor_orcid domain NamedThing SoftwareOrTool contribution_date domain NamedThing ReferenceImplementation collection domain NamedThing ReferenceImplementation purpose_detail domain NamedThing ReferenceImplementation is_open domain NamedThing ReferenceImplementation requires_registration domain NamedThing ReferenceImplementation url domain NamedThing ReferenceImplementation publication domain NamedThing ReferenceImplementation formal_specification domain NamedThing ReferenceImplementation not_relevant_to_dgps domain NamedThing ReferenceImplementation category domain NamedThing ReferenceImplementation subclass_of domain NamedThing ReferenceImplementation subclass_of range NamedThing ReferenceImplementation related_to domain NamedThing ReferenceImplementation related_to range NamedThing ReferenceImplementation contributor_name domain NamedThing ReferenceImplementation contributor_github_name domain NamedThing ReferenceImplementation contributor_orcid domain NamedThing ReferenceImplementation contribution_date domain NamedThing TrainingProgram collection domain NamedThing TrainingProgram purpose_detail domain NamedThing TrainingProgram is_open domain NamedThing TrainingProgram requires_registration domain NamedThing TrainingProgram url domain NamedThing TrainingProgram publication domain NamedThing TrainingProgram formal_specification domain NamedThing TrainingProgram not_relevant_to_dgps domain NamedThing TrainingProgram category domain NamedThing TrainingProgram subclass_of domain NamedThing TrainingProgram subclass_of range NamedThing TrainingProgram related_to domain NamedThing TrainingProgram related_to range NamedThing TrainingProgram contributor_name domain NamedThing TrainingProgram contributor_github_name domain NamedThing TrainingProgram contributor_orcid domain NamedThing TrainingProgram contribution_date domain NamedThing DataTopic category domain NamedThing DataTopic subclass_of domain NamedThing DataTopic subclass_of range NamedThing DataTopic related_to domain NamedThing DataTopic related_to range NamedThing DataTopic contributor_name domain NamedThing DataTopic contributor_github_name domain NamedThing DataTopic contributor_orcid domain NamedThing DataTopic contribution_date domain NamedThing NamedThing category domain NamedThing NamedThing subclass_of domain NamedThing NamedThing subclass_of range NamedThing NamedThing related_to domain NamedThing NamedThing related_to range NamedThing NamedThing contributor_name domain NamedThing NamedThing contributor_github_name domain NamedThing NamedThing contributor_orcid domain NamedThing NamedThing contribution_date domain NamedThing AnatomicalEntity category domain NamedThing AnatomicalEntity subclass_of domain NamedThing AnatomicalEntity subclass_of range NamedThing AnatomicalEntity related_to domain NamedThing AnatomicalEntity related_to range NamedThing AnatomicalEntity contributor_name domain NamedThing AnatomicalEntity contributor_github_name domain NamedThing AnatomicalEntity contributor_orcid domain NamedThing AnatomicalEntity contribution_date domain NamedThing Organization url domain NamedThing Organization related_to domain NamedThing Organization related_to range NamedThing Organization category domain NamedThing Organization subclass_of domain NamedThing Organization subclass_of range NamedThing Organization contributor_name domain NamedThing Organization contributor_github_name domain NamedThing Organization contributor_orcid domain NamedThing Organization contribution_date domain NamedThing DataSubstrate metadata_storage domain NamedThing DataSubstrate file_extensions domain NamedThing DataSubstrate limitations domain NamedThing DataSubstrate category domain NamedThing DataSubstrate subclass_of domain NamedThing DataSubstrate subclass_of range NamedThing DataSubstrate related_to domain NamedThing DataSubstrate related_to range NamedThing DataSubstrate contributor_name domain NamedThing DataSubstrate contributor_github_name domain NamedThing DataSubstrate contributor_orcid domain NamedThing DataSubstrate contribution_date domain NamedThing Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all Mappings Mapping Type Mapped Value self schema:Thing native https://w3id.org/bridge2ai/standards-schema-all/:NamedThing LinkML Source Direct name: NamedThing description: A generic grouping for any identifiable entity from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slots: - id - category - name - description - subclass_of - related_to - contributor_name - contributor_github_name - contributor_orcid - contribution_date class_uri: schema:Thing Induced name: NamedThing description: A generic grouping for any identifiable entity from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 attributes: id: name: id description: A unique identifier for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:identifier identifier: true alias: id owner: NamedThing domain_of: - NamedThing range: uriorcurie required: true category: name: category description: Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\". from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: type domain: NamedThing designates_type: true alias: category owner: NamedThing domain_of: - NamedThing range: category_type name: name: name description: A human-readable name for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:name alias: name owner: NamedThing domain_of: - NamedThing range: string description: name: description description: A human-readable description for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:description alias: description owner: NamedThing domain_of: - NamedThing range: string subclass_of: name: subclass_of description: Holds between two classes where the domain class is a specialization of the range class. from_schema: https://w3id.org/bridge2ai/standards-schema-all exact_mappings: - rdfs:subClassOf - MESH:isa narrow_mappings: - rdfs:subPropertyOf rank: 1000 is_a: related_to domain: NamedThing multivalued: true inherited: true alias: subclass_of owner: NamedThing domain_of: - NamedThing range: NamedThing related_to: name: related_to description: A relationship that is asserted between two named things. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 domain: NamedThing multivalued: true inherited: true alias: related_to owner: NamedThing domain_of: - NamedThing - Organization symmetric: true range: NamedThing contributor_name: name: contributor_name description: The name of the person who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_name owner: NamedThing domain_of: - NamedThing range: string contributor_github_name: name: contributor_github_name description: The name of the github user who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_github_name owner: NamedThing domain_of: - NamedThing range: string contributor_orcid: name: contributor_orcid description: The ORCiD of the person who added this node. examples: - value: ORCID:0000-0001-1234-5678 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_orcid owner: NamedThing domain_of: - NamedThing range: uriorcurie contribution_date: name: contribution_date description: The date on which the node was added. examples: - value: '2023-03-20' from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contribution_date owner: NamedThing domain_of: - NamedThing range: date class_uri: schema:Thing","title":"Class: NamedThing"},{"location":"NamedThing/#class-namedthing","text":"A generic grouping for any identifiable entity URI: schema:Thing classDiagram class NamedThing NamedThing <|-- UseCase NamedThing <|-- DataStandardOrTool NamedThing <|-- DataTopic NamedThing <|-- AnatomicalEntity NamedThing <|-- Organization NamedThing <|-- DataSubstrate NamedThing : category NamedThing : contribution_date NamedThing : contributor_github_name NamedThing : contributor_name NamedThing : contributor_orcid NamedThing : description NamedThing : id NamedThing : name NamedThing : related_to NamedThing ..> NamedThing : related_to NamedThing : subclass_of NamedThing ..> NamedThing : subclass_of","title":"Class: NamedThing"},{"location":"NamedThing/#inheritance","text":"NamedThing UseCase DataStandardOrTool DataTopic AnatomicalEntity Organization DataSubstrate","title":"Inheritance"},{"location":"NamedThing/#slots","text":"Name Cardinality and Range Description Inheritance id 1..1 Uriorcurie A unique identifier for a thing direct category 0..1 CategoryType Name of the high level ontology class in which this entity is categorized direct name 0..1 String A human-readable name for a thing direct description 0..1 String A human-readable description for a thing direct subclass_of 0..* NamedThing Holds between two classes where the domain class is a specialization of the r... direct related_to 0..* NamedThing A relationship that is asserted between two named things direct contributor_name 0..1 String The name of the person who added this node direct contributor_github_name 0..1 String The name of the github user who added this node direct contributor_orcid 0..1 Uriorcurie The ORCiD of the person who added this node direct contribution_date 0..1 Date The date on which the node was added direct","title":"Slots"},{"location":"NamedThing/#usages","text":"used by used in type used UseCase use_case_category domain NamedThing UseCase known_limitations domain NamedThing UseCase data_topics domain NamedThing UseCase data_substrates domain NamedThing UseCase standards_and_tools_for_dgp_use domain NamedThing UseCase alternative_standards_and_tools domain NamedThing UseCase enables domain NamedThing UseCase involved_in_experimental_design domain NamedThing UseCase involved_in_metadata_management domain NamedThing UseCase involved_in_quality_control domain NamedThing UseCase xref domain NamedThing UseCase category domain NamedThing UseCase subclass_of domain NamedThing UseCase subclass_of range NamedThing UseCase related_to domain NamedThing UseCase related_to range NamedThing UseCase contributor_name domain NamedThing UseCase contributor_github_name domain NamedThing UseCase contributor_orcid domain NamedThing UseCase contribution_date domain NamedThing DataStandardOrTool collection domain NamedThing DataStandardOrTool purpose_detail domain NamedThing DataStandardOrTool is_open domain NamedThing DataStandardOrTool requires_registration domain NamedThing DataStandardOrTool url domain NamedThing DataStandardOrTool publication domain NamedThing DataStandardOrTool formal_specification domain NamedThing DataStandardOrTool not_relevant_to_dgps domain NamedThing DataStandardOrTool category domain NamedThing DataStandardOrTool subclass_of domain NamedThing DataStandardOrTool subclass_of range NamedThing DataStandardOrTool related_to domain NamedThing DataStandardOrTool related_to range NamedThing DataStandardOrTool contributor_name domain NamedThing DataStandardOrTool contributor_github_name domain NamedThing DataStandardOrTool contributor_orcid domain NamedThing DataStandardOrTool contribution_date domain NamedThing DataStandard collection domain NamedThing DataStandard purpose_detail domain NamedThing DataStandard is_open domain NamedThing DataStandard requires_registration domain NamedThing DataStandard url domain NamedThing DataStandard publication domain NamedThing DataStandard formal_specification domain NamedThing DataStandard not_relevant_to_dgps domain NamedThing DataStandard category domain NamedThing DataStandard subclass_of domain NamedThing DataStandard subclass_of range NamedThing DataStandard related_to domain NamedThing DataStandard related_to range NamedThing DataStandard contributor_name domain NamedThing DataStandard contributor_github_name domain NamedThing DataStandard contributor_orcid domain NamedThing DataStandard contribution_date domain NamedThing BiomedicalStandard collection domain NamedThing BiomedicalStandard purpose_detail domain NamedThing BiomedicalStandard is_open domain NamedThing BiomedicalStandard requires_registration domain NamedThing BiomedicalStandard url domain NamedThing BiomedicalStandard publication domain NamedThing BiomedicalStandard formal_specification domain NamedThing BiomedicalStandard not_relevant_to_dgps domain NamedThing BiomedicalStandard category domain NamedThing BiomedicalStandard subclass_of domain NamedThing BiomedicalStandard subclass_of range NamedThing BiomedicalStandard related_to domain NamedThing BiomedicalStandard related_to range NamedThing BiomedicalStandard contributor_name domain NamedThing BiomedicalStandard contributor_github_name domain NamedThing BiomedicalStandard contributor_orcid domain NamedThing BiomedicalStandard contribution_date domain NamedThing Registry collection domain NamedThing Registry purpose_detail domain NamedThing Registry is_open domain NamedThing Registry requires_registration domain NamedThing Registry url domain NamedThing Registry publication domain NamedThing Registry formal_specification domain NamedThing Registry not_relevant_to_dgps domain NamedThing Registry category domain NamedThing Registry subclass_of domain NamedThing Registry subclass_of range NamedThing Registry related_to domain NamedThing Registry related_to range NamedThing Registry contributor_name domain NamedThing Registry contributor_github_name domain NamedThing Registry contributor_orcid domain NamedThing Registry contribution_date domain NamedThing OntologyOrVocabulary collection domain NamedThing OntologyOrVocabulary purpose_detail domain NamedThing OntologyOrVocabulary is_open domain NamedThing OntologyOrVocabulary requires_registration domain NamedThing OntologyOrVocabulary url domain NamedThing OntologyOrVocabulary publication domain NamedThing OntologyOrVocabulary formal_specification domain NamedThing OntologyOrVocabulary not_relevant_to_dgps domain NamedThing OntologyOrVocabulary category domain NamedThing OntologyOrVocabulary subclass_of domain NamedThing OntologyOrVocabulary subclass_of range NamedThing OntologyOrVocabulary related_to domain NamedThing OntologyOrVocabulary related_to range NamedThing OntologyOrVocabulary contributor_name domain NamedThing OntologyOrVocabulary contributor_github_name domain NamedThing OntologyOrVocabulary contributor_orcid domain NamedThing OntologyOrVocabulary contribution_date domain NamedThing ModelRepository collection domain NamedThing ModelRepository purpose_detail domain NamedThing ModelRepository is_open domain NamedThing ModelRepository requires_registration domain NamedThing ModelRepository url domain NamedThing ModelRepository publication domain NamedThing ModelRepository formal_specification domain NamedThing ModelRepository not_relevant_to_dgps domain NamedThing ModelRepository category domain NamedThing ModelRepository subclass_of domain NamedThing ModelRepository subclass_of range NamedThing ModelRepository related_to domain NamedThing ModelRepository related_to range NamedThing ModelRepository contributor_name domain NamedThing ModelRepository contributor_github_name domain NamedThing ModelRepository contributor_orcid domain NamedThing ModelRepository contribution_date domain NamedThing ReferenceDataOrDataset collection domain NamedThing ReferenceDataOrDataset purpose_detail domain NamedThing ReferenceDataOrDataset is_open domain NamedThing ReferenceDataOrDataset requires_registration domain NamedThing ReferenceDataOrDataset url domain NamedThing ReferenceDataOrDataset publication domain NamedThing ReferenceDataOrDataset formal_specification domain NamedThing ReferenceDataOrDataset not_relevant_to_dgps domain NamedThing ReferenceDataOrDataset category domain NamedThing ReferenceDataOrDataset subclass_of domain NamedThing ReferenceDataOrDataset subclass_of range NamedThing ReferenceDataOrDataset related_to domain NamedThing ReferenceDataOrDataset related_to range NamedThing ReferenceDataOrDataset contributor_name domain NamedThing ReferenceDataOrDataset contributor_github_name domain NamedThing ReferenceDataOrDataset contributor_orcid domain NamedThing ReferenceDataOrDataset contribution_date domain NamedThing SoftwareOrTool collection domain NamedThing SoftwareOrTool purpose_detail domain NamedThing SoftwareOrTool is_open domain NamedThing SoftwareOrTool requires_registration domain NamedThing SoftwareOrTool url domain NamedThing SoftwareOrTool publication domain NamedThing SoftwareOrTool formal_specification domain NamedThing SoftwareOrTool not_relevant_to_dgps domain NamedThing SoftwareOrTool category domain NamedThing SoftwareOrTool subclass_of domain NamedThing SoftwareOrTool subclass_of range NamedThing SoftwareOrTool related_to domain NamedThing SoftwareOrTool related_to range NamedThing SoftwareOrTool contributor_name domain NamedThing SoftwareOrTool contributor_github_name domain NamedThing SoftwareOrTool contributor_orcid domain NamedThing SoftwareOrTool contribution_date domain NamedThing ReferenceImplementation collection domain NamedThing ReferenceImplementation purpose_detail domain NamedThing ReferenceImplementation is_open domain NamedThing ReferenceImplementation requires_registration domain NamedThing ReferenceImplementation url domain NamedThing ReferenceImplementation publication domain NamedThing ReferenceImplementation formal_specification domain NamedThing ReferenceImplementation not_relevant_to_dgps domain NamedThing ReferenceImplementation category domain NamedThing ReferenceImplementation subclass_of domain NamedThing ReferenceImplementation subclass_of range NamedThing ReferenceImplementation related_to domain NamedThing ReferenceImplementation related_to range NamedThing ReferenceImplementation contributor_name domain NamedThing ReferenceImplementation contributor_github_name domain NamedThing ReferenceImplementation contributor_orcid domain NamedThing ReferenceImplementation contribution_date domain NamedThing TrainingProgram collection domain NamedThing TrainingProgram purpose_detail domain NamedThing TrainingProgram is_open domain NamedThing TrainingProgram requires_registration domain NamedThing TrainingProgram url domain NamedThing TrainingProgram publication domain NamedThing TrainingProgram formal_specification domain NamedThing TrainingProgram not_relevant_to_dgps domain NamedThing TrainingProgram category domain NamedThing TrainingProgram subclass_of domain NamedThing TrainingProgram subclass_of range NamedThing TrainingProgram related_to domain NamedThing TrainingProgram related_to range NamedThing TrainingProgram contributor_name domain NamedThing TrainingProgram contributor_github_name domain NamedThing TrainingProgram contributor_orcid domain NamedThing TrainingProgram contribution_date domain NamedThing DataTopic category domain NamedThing DataTopic subclass_of domain NamedThing DataTopic subclass_of range NamedThing DataTopic related_to domain NamedThing DataTopic related_to range NamedThing DataTopic contributor_name domain NamedThing DataTopic contributor_github_name domain NamedThing DataTopic contributor_orcid domain NamedThing DataTopic contribution_date domain NamedThing NamedThing category domain NamedThing NamedThing subclass_of domain NamedThing NamedThing subclass_of range NamedThing NamedThing related_to domain NamedThing NamedThing related_to range NamedThing NamedThing contributor_name domain NamedThing NamedThing contributor_github_name domain NamedThing NamedThing contributor_orcid domain NamedThing NamedThing contribution_date domain NamedThing AnatomicalEntity category domain NamedThing AnatomicalEntity subclass_of domain NamedThing AnatomicalEntity subclass_of range NamedThing AnatomicalEntity related_to domain NamedThing AnatomicalEntity related_to range NamedThing AnatomicalEntity contributor_name domain NamedThing AnatomicalEntity contributor_github_name domain NamedThing AnatomicalEntity contributor_orcid domain NamedThing AnatomicalEntity contribution_date domain NamedThing Organization url domain NamedThing Organization related_to domain NamedThing Organization related_to range NamedThing Organization category domain NamedThing Organization subclass_of domain NamedThing Organization subclass_of range NamedThing Organization contributor_name domain NamedThing Organization contributor_github_name domain NamedThing Organization contributor_orcid domain NamedThing Organization contribution_date domain NamedThing DataSubstrate metadata_storage domain NamedThing DataSubstrate file_extensions domain NamedThing DataSubstrate limitations domain NamedThing DataSubstrate category domain NamedThing DataSubstrate subclass_of domain NamedThing DataSubstrate subclass_of range NamedThing DataSubstrate related_to domain NamedThing DataSubstrate related_to range NamedThing DataSubstrate contributor_name domain NamedThing DataSubstrate contributor_github_name domain NamedThing DataSubstrate contributor_orcid domain NamedThing DataSubstrate contribution_date domain NamedThing","title":"Usages"},{"location":"NamedThing/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"NamedThing/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"NamedThing/#mappings","text":"Mapping Type Mapped Value self schema:Thing native https://w3id.org/bridge2ai/standards-schema-all/:NamedThing","title":"Mappings"},{"location":"NamedThing/#linkml-source","text":"","title":"LinkML Source"},{"location":"NamedThing/#direct","text":"name: NamedThing description: A generic grouping for any identifiable entity from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slots: - id - category - name - description - subclass_of - related_to - contributor_name - contributor_github_name - contributor_orcid - contribution_date class_uri: schema:Thing","title":"Direct"},{"location":"NamedThing/#induced","text":"name: NamedThing description: A generic grouping for any identifiable entity from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 attributes: id: name: id description: A unique identifier for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:identifier identifier: true alias: id owner: NamedThing domain_of: - NamedThing range: uriorcurie required: true category: name: category description: Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\". from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: type domain: NamedThing designates_type: true alias: category owner: NamedThing domain_of: - NamedThing range: category_type name: name: name description: A human-readable name for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:name alias: name owner: NamedThing domain_of: - NamedThing range: string description: name: description description: A human-readable description for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:description alias: description owner: NamedThing domain_of: - NamedThing range: string subclass_of: name: subclass_of description: Holds between two classes where the domain class is a specialization of the range class. from_schema: https://w3id.org/bridge2ai/standards-schema-all exact_mappings: - rdfs:subClassOf - MESH:isa narrow_mappings: - rdfs:subPropertyOf rank: 1000 is_a: related_to domain: NamedThing multivalued: true inherited: true alias: subclass_of owner: NamedThing domain_of: - NamedThing range: NamedThing related_to: name: related_to description: A relationship that is asserted between two named things. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 domain: NamedThing multivalued: true inherited: true alias: related_to owner: NamedThing domain_of: - NamedThing - Organization symmetric: true range: NamedThing contributor_name: name: contributor_name description: The name of the person who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_name owner: NamedThing domain_of: - NamedThing range: string contributor_github_name: name: contributor_github_name description: The name of the github user who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_github_name owner: NamedThing domain_of: - NamedThing range: string contributor_orcid: name: contributor_orcid description: The ORCiD of the person who added this node. examples: - value: ORCID:0000-0001-1234-5678 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_orcid owner: NamedThing domain_of: - NamedThing range: uriorcurie contribution_date: name: contribution_date description: The date on which the node was added. examples: - value: '2023-03-20' from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contribution_date owner: NamedThing domain_of: - NamedThing range: date class_uri: schema:Thing","title":"Induced"},{"location":"NcitIdentifier/","text":"Type: NcitIdentifier Identifier from NCIT reference terminology with broad coverage of the cancer domain. URI: xsd:anyURI base : URIorCURIE uri : xsd:anyURI repr : str typeof : uriorcurie Identifier and Mapping Information Valid ID Prefixes Instances of this class should have identifiers with one of the following prefixes: NCIT Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Type: NcitIdentifier"},{"location":"NcitIdentifier/#type-ncitidentifier","text":"Identifier from NCIT reference terminology with broad coverage of the cancer domain. URI: xsd:anyURI base : URIorCURIE uri : xsd:anyURI repr : str typeof : uriorcurie","title":"Type: NcitIdentifier"},{"location":"NcitIdentifier/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"NcitIdentifier/#valid-id-prefixes","text":"Instances of this class should have identifiers with one of the following prefixes: NCIT","title":"Valid ID Prefixes"},{"location":"NcitIdentifier/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"Ncname/","text":"Type: Ncname Prefix part of CURIE URI: xsd:string base : NCName uri : xsd:string repr : str Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Type: Ncname"},{"location":"Ncname/#type-ncname","text":"Prefix part of CURIE URI: xsd:string base : NCName uri : xsd:string repr : str","title":"Type: Ncname"},{"location":"Ncname/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Ncname/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"Nodeidentifier/","text":"Type: Nodeidentifier A URI, CURIE or BNODE that represents a node in a model. URI: shex:nonLiteral base : NodeIdentifier uri : shex:nonLiteral repr : str Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Type: Nodeidentifier"},{"location":"Nodeidentifier/#type-nodeidentifier","text":"A URI, CURIE or BNODE that represents a node in a model. URI: shex:nonLiteral base : NodeIdentifier uri : shex:nonLiteral repr : str","title":"Type: Nodeidentifier"},{"location":"Nodeidentifier/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Nodeidentifier/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"Objectidentifier/","text":"Type: Objectidentifier A URI or CURIE that represents an object in the model. URI: shex:iri base : ElementIdentifier uri : shex:iri repr : str Comments Used for inheritence and type checking Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Type: Objectidentifier"},{"location":"Objectidentifier/#type-objectidentifier","text":"A URI or CURIE that represents an object in the model. URI: shex:iri base : ElementIdentifier uri : shex:iri repr : str","title":"Type: Objectidentifier"},{"location":"Objectidentifier/#comments","text":"Used for inheritence and type checking","title":"Comments"},{"location":"Objectidentifier/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Objectidentifier/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"OntologyOrVocabulary/","text":"Class: OntologyOrVocabulary A set of concepts and categories, potentially defined or accompanied by their hierarchical relationships. URI: https://w3id.org/bridge2ai/standards-schema-all/:OntologyOrVocabulary classDiagram class OntologyOrVocabulary DataStandardOrTool <|-- OntologyOrVocabulary OntologyOrVocabulary : category OntologyOrVocabulary : collection OntologyOrVocabulary ..> StandardsCollectionTag : collection OntologyOrVocabulary : concerns_data_topic OntologyOrVocabulary ..> DataTopic : concerns_data_topic OntologyOrVocabulary : contribution_date OntologyOrVocabulary : contributor_github_name OntologyOrVocabulary : contributor_name OntologyOrVocabulary : contributor_orcid OntologyOrVocabulary : description OntologyOrVocabulary : formal_specification OntologyOrVocabulary : has_relevant_organization OntologyOrVocabulary ..> Organization : has_relevant_organization OntologyOrVocabulary : id OntologyOrVocabulary : is_open OntologyOrVocabulary : name OntologyOrVocabulary : not_relevant_to_dgps OntologyOrVocabulary : publication OntologyOrVocabulary : purpose_detail OntologyOrVocabulary : related_to OntologyOrVocabulary ..> NamedThing : related_to OntologyOrVocabulary : requires_registration OntologyOrVocabulary : subclass_of OntologyOrVocabulary ..> NamedThing : subclass_of OntologyOrVocabulary : url Inheritance NamedThing DataStandardOrTool OntologyOrVocabulary Slots Name Cardinality and Range Description Inheritance collection 0..* StandardsCollectionTag Tags for specific sets of standards DataStandardOrTool concerns_data_topic 0..* DataTopic Subject standard is generally applied in the context of object data topic DataStandardOrTool has_relevant_organization 0..* Organization Subject standard is managed or otherwise guided buy the object organization(s... DataStandardOrTool purpose_detail 0..1 String Text description of the standard or tool DataStandardOrTool is_open 0..1 Boolean Is the standard or tool FAIR and available free of cost? DataStandardOrTool requires_registration 0..1 Boolean Does usage of the standard or tool require registrion of a user or group with... DataStandardOrTool url 0..1 Uriorcurie URL for basic documentation of the standard or tool DataStandardOrTool publication 0..1 Uriorcurie Relevant publication for the standard or tool DataStandardOrTool formal_specification 0..1 Uriorcurie Relevant code repository or other location for a formal specification of the ... DataStandardOrTool not_relevant_to_dgps 0..1 Boolean Is the standard or tool currently relevant to DGPs? DataStandardOrTool id 1..1 Uriorcurie A unique identifier for a thing NamedThing category 0..1 CategoryType Name of the high level ontology class in which this entity is categorized NamedThing name 0..1 String A human-readable name for a thing NamedThing description 0..1 String A human-readable description for a thing NamedThing subclass_of 0..* NamedThing Holds between two classes where the domain class is a specialization of the r... NamedThing related_to 0..* NamedThing A relationship that is asserted between two named things NamedThing contributor_name 0..1 String The name of the person who added this node NamedThing contributor_github_name 0..1 String The name of the github user who added this node NamedThing contributor_orcid 0..1 Uriorcurie The ORCiD of the person who added this node NamedThing contribution_date 0..1 Date The date on which the node was added NamedThing Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all Mappings Mapping Type Mapped Value self https://w3id.org/bridge2ai/standards-schema-all/:OntologyOrVocabulary native https://w3id.org/bridge2ai/standards-schema-all/:OntologyOrVocabulary LinkML Source Direct name: OntologyOrVocabulary description: A set of concepts and categories, potentially defined or accompanied by their hierarchical relationships. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: DataStandardOrTool Induced name: OntologyOrVocabulary description: A set of concepts and categories, potentially defined or accompanied by their hierarchical relationships. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: DataStandardOrTool attributes: collection: name: collection description: Tags for specific sets of standards. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing multivalued: true alias: collection owner: OntologyOrVocabulary domain_of: - DataStandardOrTool range: StandardsCollectionTag concerns_data_topic: name: concerns_data_topic description: Subject standard is generally applied in the context of object data topic. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: related_to domain: DataStandardOrTool multivalued: true inherited: true alias: concerns_data_topic owner: OntologyOrVocabulary domain_of: - DataStandardOrTool range: DataTopic has_relevant_organization: name: has_relevant_organization description: Subject standard is managed or otherwise guided buy the object organization(s). from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: related_to domain: DataStandardOrTool multivalued: true inherited: true alias: has_relevant_organization owner: OntologyOrVocabulary domain_of: - DataStandardOrTool range: Organization purpose_detail: name: purpose_detail description: Text description of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: purpose_detail owner: OntologyOrVocabulary domain_of: - DataStandardOrTool range: string is_open: name: is_open description: Is the standard or tool FAIR and available free of cost? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: is_open owner: OntologyOrVocabulary domain_of: - DataStandardOrTool range: boolean requires_registration: name: requires_registration description: Does usage of the standard or tool require registrion of a user or group with some organization or managerial body? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: requires_registration owner: OntologyOrVocabulary domain_of: - DataStandardOrTool range: boolean url: name: url description: URL for basic documentation of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: url owner: OntologyOrVocabulary domain_of: - DataStandardOrTool - Organization range: uriorcurie publication: name: publication description: Relevant publication for the standard or tool. Prefer a DOI or PUBMED. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: publication owner: OntologyOrVocabulary domain_of: - DataStandardOrTool range: uriorcurie formal_specification: name: formal_specification description: Relevant code repository or other location for a formal specification of the standard or tool. Often a URL, particularly to a Git repository. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: formal_specification owner: OntologyOrVocabulary domain_of: - DataStandardOrTool range: uriorcurie not_relevant_to_dgps: name: not_relevant_to_dgps description: Is the standard or tool currently relevant to DGPs? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: not_relevant_to_dgps owner: OntologyOrVocabulary domain_of: - DataStandardOrTool range: boolean id: name: id description: A unique identifier for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:identifier identifier: true alias: id owner: OntologyOrVocabulary domain_of: - NamedThing range: uriorcurie required: true category: name: category description: Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\". from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: type domain: NamedThing designates_type: true alias: category owner: OntologyOrVocabulary domain_of: - NamedThing range: category_type name: name: name description: A human-readable name for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:name alias: name owner: OntologyOrVocabulary domain_of: - NamedThing range: string description: name: description description: A human-readable description for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:description alias: description owner: OntologyOrVocabulary domain_of: - NamedThing range: string subclass_of: name: subclass_of description: Holds between two classes where the domain class is a specialization of the range class. from_schema: https://w3id.org/bridge2ai/standards-schema-all exact_mappings: - rdfs:subClassOf - MESH:isa narrow_mappings: - rdfs:subPropertyOf rank: 1000 is_a: related_to domain: NamedThing multivalued: true inherited: true alias: subclass_of owner: OntologyOrVocabulary domain_of: - NamedThing range: NamedThing related_to: name: related_to description: A relationship that is asserted between two named things. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 domain: NamedThing multivalued: true inherited: true alias: related_to owner: OntologyOrVocabulary domain_of: - NamedThing - Organization symmetric: true range: NamedThing contributor_name: name: contributor_name description: The name of the person who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_name owner: OntologyOrVocabulary domain_of: - NamedThing range: string contributor_github_name: name: contributor_github_name description: The name of the github user who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_github_name owner: OntologyOrVocabulary domain_of: - NamedThing range: string contributor_orcid: name: contributor_orcid description: The ORCiD of the person who added this node. examples: - value: ORCID:0000-0001-1234-5678 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_orcid owner: OntologyOrVocabulary domain_of: - NamedThing range: uriorcurie contribution_date: name: contribution_date description: The date on which the node was added. examples: - value: '2023-03-20' from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contribution_date owner: OntologyOrVocabulary domain_of: - NamedThing range: date","title":"Class: OntologyOrVocabulary"},{"location":"OntologyOrVocabulary/#class-ontologyorvocabulary","text":"A set of concepts and categories, potentially defined or accompanied by their hierarchical relationships. URI: https://w3id.org/bridge2ai/standards-schema-all/:OntologyOrVocabulary classDiagram class OntologyOrVocabulary DataStandardOrTool <|-- OntologyOrVocabulary OntologyOrVocabulary : category OntologyOrVocabulary : collection OntologyOrVocabulary ..> StandardsCollectionTag : collection OntologyOrVocabulary : concerns_data_topic OntologyOrVocabulary ..> DataTopic : concerns_data_topic OntologyOrVocabulary : contribution_date OntologyOrVocabulary : contributor_github_name OntologyOrVocabulary : contributor_name OntologyOrVocabulary : contributor_orcid OntologyOrVocabulary : description OntologyOrVocabulary : formal_specification OntologyOrVocabulary : has_relevant_organization OntologyOrVocabulary ..> Organization : has_relevant_organization OntologyOrVocabulary : id OntologyOrVocabulary : is_open OntologyOrVocabulary : name OntologyOrVocabulary : not_relevant_to_dgps OntologyOrVocabulary : publication OntologyOrVocabulary : purpose_detail OntologyOrVocabulary : related_to OntologyOrVocabulary ..> NamedThing : related_to OntologyOrVocabulary : requires_registration OntologyOrVocabulary : subclass_of OntologyOrVocabulary ..> NamedThing : subclass_of OntologyOrVocabulary : url","title":"Class: OntologyOrVocabulary"},{"location":"OntologyOrVocabulary/#inheritance","text":"NamedThing DataStandardOrTool OntologyOrVocabulary","title":"Inheritance"},{"location":"OntologyOrVocabulary/#slots","text":"Name Cardinality and Range Description Inheritance collection 0..* StandardsCollectionTag Tags for specific sets of standards DataStandardOrTool concerns_data_topic 0..* DataTopic Subject standard is generally applied in the context of object data topic DataStandardOrTool has_relevant_organization 0..* Organization Subject standard is managed or otherwise guided buy the object organization(s... DataStandardOrTool purpose_detail 0..1 String Text description of the standard or tool DataStandardOrTool is_open 0..1 Boolean Is the standard or tool FAIR and available free of cost? DataStandardOrTool requires_registration 0..1 Boolean Does usage of the standard or tool require registrion of a user or group with... DataStandardOrTool url 0..1 Uriorcurie URL for basic documentation of the standard or tool DataStandardOrTool publication 0..1 Uriorcurie Relevant publication for the standard or tool DataStandardOrTool formal_specification 0..1 Uriorcurie Relevant code repository or other location for a formal specification of the ... DataStandardOrTool not_relevant_to_dgps 0..1 Boolean Is the standard or tool currently relevant to DGPs? DataStandardOrTool id 1..1 Uriorcurie A unique identifier for a thing NamedThing category 0..1 CategoryType Name of the high level ontology class in which this entity is categorized NamedThing name 0..1 String A human-readable name for a thing NamedThing description 0..1 String A human-readable description for a thing NamedThing subclass_of 0..* NamedThing Holds between two classes where the domain class is a specialization of the r... NamedThing related_to 0..* NamedThing A relationship that is asserted between two named things NamedThing contributor_name 0..1 String The name of the person who added this node NamedThing contributor_github_name 0..1 String The name of the github user who added this node NamedThing contributor_orcid 0..1 Uriorcurie The ORCiD of the person who added this node NamedThing contribution_date 0..1 Date The date on which the node was added NamedThing","title":"Slots"},{"location":"OntologyOrVocabulary/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"OntologyOrVocabulary/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"OntologyOrVocabulary/#mappings","text":"Mapping Type Mapped Value self https://w3id.org/bridge2ai/standards-schema-all/:OntologyOrVocabulary native https://w3id.org/bridge2ai/standards-schema-all/:OntologyOrVocabulary","title":"Mappings"},{"location":"OntologyOrVocabulary/#linkml-source","text":"","title":"LinkML Source"},{"location":"OntologyOrVocabulary/#direct","text":"name: OntologyOrVocabulary description: A set of concepts and categories, potentially defined or accompanied by their hierarchical relationships. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: DataStandardOrTool","title":"Direct"},{"location":"OntologyOrVocabulary/#induced","text":"name: OntologyOrVocabulary description: A set of concepts and categories, potentially defined or accompanied by their hierarchical relationships. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: DataStandardOrTool attributes: collection: name: collection description: Tags for specific sets of standards. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing multivalued: true alias: collection owner: OntologyOrVocabulary domain_of: - DataStandardOrTool range: StandardsCollectionTag concerns_data_topic: name: concerns_data_topic description: Subject standard is generally applied in the context of object data topic. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: related_to domain: DataStandardOrTool multivalued: true inherited: true alias: concerns_data_topic owner: OntologyOrVocabulary domain_of: - DataStandardOrTool range: DataTopic has_relevant_organization: name: has_relevant_organization description: Subject standard is managed or otherwise guided buy the object organization(s). from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: related_to domain: DataStandardOrTool multivalued: true inherited: true alias: has_relevant_organization owner: OntologyOrVocabulary domain_of: - DataStandardOrTool range: Organization purpose_detail: name: purpose_detail description: Text description of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: purpose_detail owner: OntologyOrVocabulary domain_of: - DataStandardOrTool range: string is_open: name: is_open description: Is the standard or tool FAIR and available free of cost? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: is_open owner: OntologyOrVocabulary domain_of: - DataStandardOrTool range: boolean requires_registration: name: requires_registration description: Does usage of the standard or tool require registrion of a user or group with some organization or managerial body? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: requires_registration owner: OntologyOrVocabulary domain_of: - DataStandardOrTool range: boolean url: name: url description: URL for basic documentation of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: url owner: OntologyOrVocabulary domain_of: - DataStandardOrTool - Organization range: uriorcurie publication: name: publication description: Relevant publication for the standard or tool. Prefer a DOI or PUBMED. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: publication owner: OntologyOrVocabulary domain_of: - DataStandardOrTool range: uriorcurie formal_specification: name: formal_specification description: Relevant code repository or other location for a formal specification of the standard or tool. Often a URL, particularly to a Git repository. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: formal_specification owner: OntologyOrVocabulary domain_of: - DataStandardOrTool range: uriorcurie not_relevant_to_dgps: name: not_relevant_to_dgps description: Is the standard or tool currently relevant to DGPs? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: not_relevant_to_dgps owner: OntologyOrVocabulary domain_of: - DataStandardOrTool range: boolean id: name: id description: A unique identifier for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:identifier identifier: true alias: id owner: OntologyOrVocabulary domain_of: - NamedThing range: uriorcurie required: true category: name: category description: Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\". from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: type domain: NamedThing designates_type: true alias: category owner: OntologyOrVocabulary domain_of: - NamedThing range: category_type name: name: name description: A human-readable name for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:name alias: name owner: OntologyOrVocabulary domain_of: - NamedThing range: string description: name: description description: A human-readable description for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:description alias: description owner: OntologyOrVocabulary domain_of: - NamedThing range: string subclass_of: name: subclass_of description: Holds between two classes where the domain class is a specialization of the range class. from_schema: https://w3id.org/bridge2ai/standards-schema-all exact_mappings: - rdfs:subClassOf - MESH:isa narrow_mappings: - rdfs:subPropertyOf rank: 1000 is_a: related_to domain: NamedThing multivalued: true inherited: true alias: subclass_of owner: OntologyOrVocabulary domain_of: - NamedThing range: NamedThing related_to: name: related_to description: A relationship that is asserted between two named things. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 domain: NamedThing multivalued: true inherited: true alias: related_to owner: OntologyOrVocabulary domain_of: - NamedThing - Organization symmetric: true range: NamedThing contributor_name: name: contributor_name description: The name of the person who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_name owner: OntologyOrVocabulary domain_of: - NamedThing range: string contributor_github_name: name: contributor_github_name description: The name of the github user who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_github_name owner: OntologyOrVocabulary domain_of: - NamedThing range: string contributor_orcid: name: contributor_orcid description: The ORCiD of the person who added this node. examples: - value: ORCID:0000-0001-1234-5678 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_orcid owner: OntologyOrVocabulary domain_of: - NamedThing range: uriorcurie contribution_date: name: contribution_date description: The date on which the node was added. examples: - value: '2023-03-20' from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contribution_date owner: OntologyOrVocabulary domain_of: - NamedThing range: date","title":"Induced"},{"location":"Organization/","text":"Class: Organization Represents a group or organization related to or responsible for one or more Bridge2AI standards. URI: https://w3id.org/bridge2ai/standards-schema-all/:Organization classDiagram class Organization NamedThing <|-- Organization Organization : category Organization : contribution_date Organization : contributor_github_name Organization : contributor_name Organization : contributor_orcid Organization : description Organization : id Organization : name Organization : related_to Organization ..> NamedThing : related_to Organization : ror_id Organization : subclass_of Organization ..> NamedThing : subclass_of Organization : url Organization : wikidata_id Inheritance NamedThing Organization Slots Name Cardinality and Range Description Inheritance ror_id 0..1 RorIdentifier Unique ROR identifier direct wikidata_id 0..1 WikidataIdentifier Unique Wikidata identifier direct url 0..1 Uriorcurie URL for basic documentation of the standard or tool direct related_to 0..* NamedThing A relationship that is asserted between two named things direct id 1..1 Uriorcurie A unique identifier for a thing NamedThing category 0..1 CategoryType Name of the high level ontology class in which this entity is categorized NamedThing name 0..1 String A human-readable name for a thing NamedThing description 0..1 String A human-readable description for a thing NamedThing subclass_of 0..* NamedThing Holds between two classes where the domain class is a specialization of the r... NamedThing contributor_name 0..1 String The name of the person who added this node NamedThing contributor_github_name 0..1 String The name of the github user who added this node NamedThing contributor_orcid 0..1 Uriorcurie The ORCiD of the person who added this node NamedThing contribution_date 0..1 Date The date on which the node was added NamedThing Usages used by used in type used DataStandardOrTool has_relevant_organization range Organization DataStandard has_relevant_organization range Organization BiomedicalStandard has_relevant_organization range Organization Registry has_relevant_organization range Organization OntologyOrVocabulary has_relevant_organization range Organization ModelRepository has_relevant_organization range Organization ReferenceDataOrDataset has_relevant_organization range Organization SoftwareOrTool has_relevant_organization range Organization ReferenceImplementation has_relevant_organization range Organization TrainingProgram has_relevant_organization range Organization OrganizationContainer organizations range Organization Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all Mappings Mapping Type Mapped Value self https://w3id.org/bridge2ai/standards-schema-all/:Organization native https://w3id.org/bridge2ai/standards-schema-all/:Organization LinkML Source Direct name: Organization description: Represents a group or organization related to or responsible for one or more Bridge2AI standards. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: NamedThing slots: - ror_id - wikidata_id - url - related_to Induced name: Organization description: Represents a group or organization related to or responsible for one or more Bridge2AI standards. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: NamedThing attributes: ror_id: name: ror_id description: Unique ROR identifier. examples: - value: ROR:02mp31p96 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 values_from: - ROR alias: ror_id owner: Organization domain_of: - Organization range: ror_identifier wikidata_id: name: wikidata_id description: Unique Wikidata identifier. examples: - value: WIKIDATA:Q282186 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 values_from: - WIKIDATA alias: wikidata_id owner: Organization domain_of: - Organization range: wikidata_identifier url: name: url description: URL for basic documentation of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: url owner: Organization domain_of: - DataStandardOrTool - Organization range: uriorcurie related_to: name: related_to description: A relationship that is asserted between two named things. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 domain: NamedThing multivalued: true inherited: true alias: related_to owner: Organization domain_of: - NamedThing - Organization symmetric: true range: NamedThing id: name: id description: A unique identifier for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:identifier identifier: true alias: id owner: Organization domain_of: - NamedThing range: uriorcurie required: true category: name: category description: Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\". from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: type domain: NamedThing designates_type: true alias: category owner: Organization domain_of: - NamedThing range: category_type name: name: name description: A human-readable name for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:name alias: name owner: Organization domain_of: - NamedThing range: string description: name: description description: A human-readable description for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:description alias: description owner: Organization domain_of: - NamedThing range: string subclass_of: name: subclass_of description: Holds between two classes where the domain class is a specialization of the range class. from_schema: https://w3id.org/bridge2ai/standards-schema-all exact_mappings: - rdfs:subClassOf - MESH:isa narrow_mappings: - rdfs:subPropertyOf rank: 1000 is_a: related_to domain: NamedThing multivalued: true inherited: true alias: subclass_of owner: Organization domain_of: - NamedThing range: NamedThing contributor_name: name: contributor_name description: The name of the person who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_name owner: Organization domain_of: - NamedThing range: string contributor_github_name: name: contributor_github_name description: The name of the github user who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_github_name owner: Organization domain_of: - NamedThing range: string contributor_orcid: name: contributor_orcid description: The ORCiD of the person who added this node. examples: - value: ORCID:0000-0001-1234-5678 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_orcid owner: Organization domain_of: - NamedThing range: uriorcurie contribution_date: name: contribution_date description: The date on which the node was added. examples: - value: '2023-03-20' from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contribution_date owner: Organization domain_of: - NamedThing range: date","title":"Class: Organization"},{"location":"Organization/#class-organization","text":"Represents a group or organization related to or responsible for one or more Bridge2AI standards. URI: https://w3id.org/bridge2ai/standards-schema-all/:Organization classDiagram class Organization NamedThing <|-- Organization Organization : category Organization : contribution_date Organization : contributor_github_name Organization : contributor_name Organization : contributor_orcid Organization : description Organization : id Organization : name Organization : related_to Organization ..> NamedThing : related_to Organization : ror_id Organization : subclass_of Organization ..> NamedThing : subclass_of Organization : url Organization : wikidata_id","title":"Class: Organization"},{"location":"Organization/#inheritance","text":"NamedThing Organization","title":"Inheritance"},{"location":"Organization/#slots","text":"Name Cardinality and Range Description Inheritance ror_id 0..1 RorIdentifier Unique ROR identifier direct wikidata_id 0..1 WikidataIdentifier Unique Wikidata identifier direct url 0..1 Uriorcurie URL for basic documentation of the standard or tool direct related_to 0..* NamedThing A relationship that is asserted between two named things direct id 1..1 Uriorcurie A unique identifier for a thing NamedThing category 0..1 CategoryType Name of the high level ontology class in which this entity is categorized NamedThing name 0..1 String A human-readable name for a thing NamedThing description 0..1 String A human-readable description for a thing NamedThing subclass_of 0..* NamedThing Holds between two classes where the domain class is a specialization of the r... NamedThing contributor_name 0..1 String The name of the person who added this node NamedThing contributor_github_name 0..1 String The name of the github user who added this node NamedThing contributor_orcid 0..1 Uriorcurie The ORCiD of the person who added this node NamedThing contribution_date 0..1 Date The date on which the node was added NamedThing","title":"Slots"},{"location":"Organization/#usages","text":"used by used in type used DataStandardOrTool has_relevant_organization range Organization DataStandard has_relevant_organization range Organization BiomedicalStandard has_relevant_organization range Organization Registry has_relevant_organization range Organization OntologyOrVocabulary has_relevant_organization range Organization ModelRepository has_relevant_organization range Organization ReferenceDataOrDataset has_relevant_organization range Organization SoftwareOrTool has_relevant_organization range Organization ReferenceImplementation has_relevant_organization range Organization TrainingProgram has_relevant_organization range Organization OrganizationContainer organizations range Organization","title":"Usages"},{"location":"Organization/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Organization/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"Organization/#mappings","text":"Mapping Type Mapped Value self https://w3id.org/bridge2ai/standards-schema-all/:Organization native https://w3id.org/bridge2ai/standards-schema-all/:Organization","title":"Mappings"},{"location":"Organization/#linkml-source","text":"","title":"LinkML Source"},{"location":"Organization/#direct","text":"name: Organization description: Represents a group or organization related to or responsible for one or more Bridge2AI standards. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: NamedThing slots: - ror_id - wikidata_id - url - related_to","title":"Direct"},{"location":"Organization/#induced","text":"name: Organization description: Represents a group or organization related to or responsible for one or more Bridge2AI standards. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: NamedThing attributes: ror_id: name: ror_id description: Unique ROR identifier. examples: - value: ROR:02mp31p96 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 values_from: - ROR alias: ror_id owner: Organization domain_of: - Organization range: ror_identifier wikidata_id: name: wikidata_id description: Unique Wikidata identifier. examples: - value: WIKIDATA:Q282186 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 values_from: - WIKIDATA alias: wikidata_id owner: Organization domain_of: - Organization range: wikidata_identifier url: name: url description: URL for basic documentation of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: url owner: Organization domain_of: - DataStandardOrTool - Organization range: uriorcurie related_to: name: related_to description: A relationship that is asserted between two named things. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 domain: NamedThing multivalued: true inherited: true alias: related_to owner: Organization domain_of: - NamedThing - Organization symmetric: true range: NamedThing id: name: id description: A unique identifier for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:identifier identifier: true alias: id owner: Organization domain_of: - NamedThing range: uriorcurie required: true category: name: category description: Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\". from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: type domain: NamedThing designates_type: true alias: category owner: Organization domain_of: - NamedThing range: category_type name: name: name description: A human-readable name for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:name alias: name owner: Organization domain_of: - NamedThing range: string description: name: description description: A human-readable description for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:description alias: description owner: Organization domain_of: - NamedThing range: string subclass_of: name: subclass_of description: Holds between two classes where the domain class is a specialization of the range class. from_schema: https://w3id.org/bridge2ai/standards-schema-all exact_mappings: - rdfs:subClassOf - MESH:isa narrow_mappings: - rdfs:subPropertyOf rank: 1000 is_a: related_to domain: NamedThing multivalued: true inherited: true alias: subclass_of owner: Organization domain_of: - NamedThing range: NamedThing contributor_name: name: contributor_name description: The name of the person who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_name owner: Organization domain_of: - NamedThing range: string contributor_github_name: name: contributor_github_name description: The name of the github user who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_github_name owner: Organization domain_of: - NamedThing range: string contributor_orcid: name: contributor_orcid description: The ORCiD of the person who added this node. examples: - value: ORCID:0000-0001-1234-5678 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_orcid owner: Organization domain_of: - NamedThing range: uriorcurie contribution_date: name: contribution_date description: The date on which the node was added. examples: - value: '2023-03-20' from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contribution_date owner: Organization domain_of: - NamedThing range: date","title":"Induced"},{"location":"OrganizationContainer/","text":"Class: OrganizationContainer A container for Organizations. URI: https://w3id.org/bridge2ai/standards-schema-all/:OrganizationContainer classDiagram class OrganizationContainer OrganizationContainer : organizations OrganizationContainer ..> Organization : organizations Slots Name Cardinality and Range Description Inheritance organizations 0..* Organization Collection of associated organizations direct Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all Mappings Mapping Type Mapped Value self https://w3id.org/bridge2ai/standards-schema-all/:OrganizationContainer native https://w3id.org/bridge2ai/standards-schema-all/:OrganizationContainer LinkML Source Direct name: OrganizationContainer description: A container for Organizations. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slots: - organizations Induced name: OrganizationContainer description: A container for Organizations. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 attributes: organizations: name: organizations description: Collection of associated organizations. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 multivalued: true alias: organizations owner: OrganizationContainer domain_of: - OrganizationContainer range: Organization inlined: true inlined_as_list: true","title":"Class: OrganizationContainer"},{"location":"OrganizationContainer/#class-organizationcontainer","text":"A container for Organizations. URI: https://w3id.org/bridge2ai/standards-schema-all/:OrganizationContainer classDiagram class OrganizationContainer OrganizationContainer : organizations OrganizationContainer ..> Organization : organizations","title":"Class: OrganizationContainer"},{"location":"OrganizationContainer/#slots","text":"Name Cardinality and Range Description Inheritance organizations 0..* Organization Collection of associated organizations direct","title":"Slots"},{"location":"OrganizationContainer/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"OrganizationContainer/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"OrganizationContainer/#mappings","text":"Mapping Type Mapped Value self https://w3id.org/bridge2ai/standards-schema-all/:OrganizationContainer native https://w3id.org/bridge2ai/standards-schema-all/:OrganizationContainer","title":"Mappings"},{"location":"OrganizationContainer/#linkml-source","text":"","title":"LinkML Source"},{"location":"OrganizationContainer/#direct","text":"name: OrganizationContainer description: A container for Organizations. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slots: - organizations","title":"Direct"},{"location":"OrganizationContainer/#induced","text":"name: OrganizationContainer description: A container for Organizations. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 attributes: organizations: name: organizations description: Collection of associated organizations. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 multivalued: true alias: organizations owner: OrganizationContainer domain_of: - OrganizationContainer range: Organization inlined: true inlined_as_list: true","title":"Induced"},{"location":"ROR_ID/","text":"Slot: ROR_ID URI: STANDARDSORGANIZATION:ROR_ID Applicable Classes Name Description Organization Represents a group or organization related to or responsible for one or more ... Properties Range: RorIdentifier Examples Value ROR:02mp31p96 Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-organization-schema LinkML Source name: ROR_ID examples: - value: ROR:02mp31p96 from_schema: https://w3id.org/bridge2ai/standards-organization-schema rank: 1000 values_from: - ROR alias: ROR_ID domain_of: - Organization range: ror identifier","title":"Slot: ROR_ID"},{"location":"ROR_ID/#slot-ror_id","text":"URI: STANDARDSORGANIZATION:ROR_ID","title":"Slot: ROR_ID"},{"location":"ROR_ID/#applicable-classes","text":"Name Description Organization Represents a group or organization related to or responsible for one or more ...","title":"Applicable Classes"},{"location":"ROR_ID/#properties","text":"Range: RorIdentifier","title":"Properties"},{"location":"ROR_ID/#examples","text":"Value ROR:02mp31p96","title":"Examples"},{"location":"ROR_ID/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"ROR_ID/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-organization-schema","title":"Schema Source"},{"location":"ROR_ID/#linkml-source","text":"name: ROR_ID examples: - value: ROR:02mp31p96 from_schema: https://w3id.org/bridge2ai/standards-organization-schema rank: 1000 values_from: - ROR alias: ROR_ID domain_of: - Organization range: ror identifier","title":"LinkML Source"},{"location":"ReferenceDataOrDataset/","text":"Class: ReferenceDataOrDataset Represents a resource in the Bridge2AI Standards Registry serving as a standardized, reusable data source. URI: https://w3id.org/bridge2ai/standards-schema-all/:ReferenceDataOrDataset classDiagram class ReferenceDataOrDataset DataStandardOrTool <|-- ReferenceDataOrDataset ReferenceDataOrDataset : category ReferenceDataOrDataset : collection ReferenceDataOrDataset ..> StandardsCollectionTag : collection ReferenceDataOrDataset : concerns_data_topic ReferenceDataOrDataset ..> DataTopic : concerns_data_topic ReferenceDataOrDataset : contribution_date ReferenceDataOrDataset : contributor_github_name ReferenceDataOrDataset : contributor_name ReferenceDataOrDataset : contributor_orcid ReferenceDataOrDataset : description ReferenceDataOrDataset : formal_specification ReferenceDataOrDataset : has_relevant_organization ReferenceDataOrDataset ..> Organization : has_relevant_organization ReferenceDataOrDataset : id ReferenceDataOrDataset : is_open ReferenceDataOrDataset : name ReferenceDataOrDataset : not_relevant_to_dgps ReferenceDataOrDataset : publication ReferenceDataOrDataset : purpose_detail ReferenceDataOrDataset : related_to ReferenceDataOrDataset ..> NamedThing : related_to ReferenceDataOrDataset : requires_registration ReferenceDataOrDataset : subclass_of ReferenceDataOrDataset ..> NamedThing : subclass_of ReferenceDataOrDataset : url Inheritance NamedThing DataStandardOrTool ReferenceDataOrDataset Slots Name Cardinality and Range Description Inheritance collection 0..* StandardsCollectionTag Tags for specific sets of standards DataStandardOrTool concerns_data_topic 0..* DataTopic Subject standard is generally applied in the context of object data topic DataStandardOrTool has_relevant_organization 0..* Organization Subject standard is managed or otherwise guided buy the object organization(s... DataStandardOrTool purpose_detail 0..1 String Text description of the standard or tool DataStandardOrTool is_open 0..1 Boolean Is the standard or tool FAIR and available free of cost? DataStandardOrTool requires_registration 0..1 Boolean Does usage of the standard or tool require registrion of a user or group with... DataStandardOrTool url 0..1 Uriorcurie URL for basic documentation of the standard or tool DataStandardOrTool publication 0..1 Uriorcurie Relevant publication for the standard or tool DataStandardOrTool formal_specification 0..1 Uriorcurie Relevant code repository or other location for a formal specification of the ... DataStandardOrTool not_relevant_to_dgps 0..1 Boolean Is the standard or tool currently relevant to DGPs? DataStandardOrTool id 1..1 Uriorcurie A unique identifier for a thing NamedThing category 0..1 CategoryType Name of the high level ontology class in which this entity is categorized NamedThing name 0..1 String A human-readable name for a thing NamedThing description 0..1 String A human-readable description for a thing NamedThing subclass_of 0..* NamedThing Holds between two classes where the domain class is a specialization of the r... NamedThing related_to 0..* NamedThing A relationship that is asserted between two named things NamedThing contributor_name 0..1 String The name of the person who added this node NamedThing contributor_github_name 0..1 String The name of the github user who added this node NamedThing contributor_orcid 0..1 Uriorcurie The ORCiD of the person who added this node NamedThing contribution_date 0..1 Date The date on which the node was added NamedThing Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all Mappings Mapping Type Mapped Value self https://w3id.org/bridge2ai/standards-schema-all/:ReferenceDataOrDataset native https://w3id.org/bridge2ai/standards-schema-all/:ReferenceDataOrDataset LinkML Source Direct name: ReferenceDataOrDataset description: Represents a resource in the Bridge2AI Standards Registry serving as a standardized, reusable data source. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: DataStandardOrTool Induced name: ReferenceDataOrDataset description: Represents a resource in the Bridge2AI Standards Registry serving as a standardized, reusable data source. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: DataStandardOrTool attributes: collection: name: collection description: Tags for specific sets of standards. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing multivalued: true alias: collection owner: ReferenceDataOrDataset domain_of: - DataStandardOrTool range: StandardsCollectionTag concerns_data_topic: name: concerns_data_topic description: Subject standard is generally applied in the context of object data topic. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: related_to domain: DataStandardOrTool multivalued: true inherited: true alias: concerns_data_topic owner: ReferenceDataOrDataset domain_of: - DataStandardOrTool range: DataTopic has_relevant_organization: name: has_relevant_organization description: Subject standard is managed or otherwise guided buy the object organization(s). from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: related_to domain: DataStandardOrTool multivalued: true inherited: true alias: has_relevant_organization owner: ReferenceDataOrDataset domain_of: - DataStandardOrTool range: Organization purpose_detail: name: purpose_detail description: Text description of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: purpose_detail owner: ReferenceDataOrDataset domain_of: - DataStandardOrTool range: string is_open: name: is_open description: Is the standard or tool FAIR and available free of cost? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: is_open owner: ReferenceDataOrDataset domain_of: - DataStandardOrTool range: boolean requires_registration: name: requires_registration description: Does usage of the standard or tool require registrion of a user or group with some organization or managerial body? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: requires_registration owner: ReferenceDataOrDataset domain_of: - DataStandardOrTool range: boolean url: name: url description: URL for basic documentation of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: url owner: ReferenceDataOrDataset domain_of: - DataStandardOrTool - Organization range: uriorcurie publication: name: publication description: Relevant publication for the standard or tool. Prefer a DOI or PUBMED. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: publication owner: ReferenceDataOrDataset domain_of: - DataStandardOrTool range: uriorcurie formal_specification: name: formal_specification description: Relevant code repository or other location for a formal specification of the standard or tool. Often a URL, particularly to a Git repository. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: formal_specification owner: ReferenceDataOrDataset domain_of: - DataStandardOrTool range: uriorcurie not_relevant_to_dgps: name: not_relevant_to_dgps description: Is the standard or tool currently relevant to DGPs? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: not_relevant_to_dgps owner: ReferenceDataOrDataset domain_of: - DataStandardOrTool range: boolean id: name: id description: A unique identifier for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:identifier identifier: true alias: id owner: ReferenceDataOrDataset domain_of: - NamedThing range: uriorcurie required: true category: name: category description: Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\". from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: type domain: NamedThing designates_type: true alias: category owner: ReferenceDataOrDataset domain_of: - NamedThing range: category_type name: name: name description: A human-readable name for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:name alias: name owner: ReferenceDataOrDataset domain_of: - NamedThing range: string description: name: description description: A human-readable description for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:description alias: description owner: ReferenceDataOrDataset domain_of: - NamedThing range: string subclass_of: name: subclass_of description: Holds between two classes where the domain class is a specialization of the range class. from_schema: https://w3id.org/bridge2ai/standards-schema-all exact_mappings: - rdfs:subClassOf - MESH:isa narrow_mappings: - rdfs:subPropertyOf rank: 1000 is_a: related_to domain: NamedThing multivalued: true inherited: true alias: subclass_of owner: ReferenceDataOrDataset domain_of: - NamedThing range: NamedThing related_to: name: related_to description: A relationship that is asserted between two named things. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 domain: NamedThing multivalued: true inherited: true alias: related_to owner: ReferenceDataOrDataset domain_of: - NamedThing - Organization symmetric: true range: NamedThing contributor_name: name: contributor_name description: The name of the person who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_name owner: ReferenceDataOrDataset domain_of: - NamedThing range: string contributor_github_name: name: contributor_github_name description: The name of the github user who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_github_name owner: ReferenceDataOrDataset domain_of: - NamedThing range: string contributor_orcid: name: contributor_orcid description: The ORCiD of the person who added this node. examples: - value: ORCID:0000-0001-1234-5678 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_orcid owner: ReferenceDataOrDataset domain_of: - NamedThing range: uriorcurie contribution_date: name: contribution_date description: The date on which the node was added. examples: - value: '2023-03-20' from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contribution_date owner: ReferenceDataOrDataset domain_of: - NamedThing range: date","title":"Class: ReferenceDataOrDataset"},{"location":"ReferenceDataOrDataset/#class-referencedataordataset","text":"Represents a resource in the Bridge2AI Standards Registry serving as a standardized, reusable data source. URI: https://w3id.org/bridge2ai/standards-schema-all/:ReferenceDataOrDataset classDiagram class ReferenceDataOrDataset DataStandardOrTool <|-- ReferenceDataOrDataset ReferenceDataOrDataset : category ReferenceDataOrDataset : collection ReferenceDataOrDataset ..> StandardsCollectionTag : collection ReferenceDataOrDataset : concerns_data_topic ReferenceDataOrDataset ..> DataTopic : concerns_data_topic ReferenceDataOrDataset : contribution_date ReferenceDataOrDataset : contributor_github_name ReferenceDataOrDataset : contributor_name ReferenceDataOrDataset : contributor_orcid ReferenceDataOrDataset : description ReferenceDataOrDataset : formal_specification ReferenceDataOrDataset : has_relevant_organization ReferenceDataOrDataset ..> Organization : has_relevant_organization ReferenceDataOrDataset : id ReferenceDataOrDataset : is_open ReferenceDataOrDataset : name ReferenceDataOrDataset : not_relevant_to_dgps ReferenceDataOrDataset : publication ReferenceDataOrDataset : purpose_detail ReferenceDataOrDataset : related_to ReferenceDataOrDataset ..> NamedThing : related_to ReferenceDataOrDataset : requires_registration ReferenceDataOrDataset : subclass_of ReferenceDataOrDataset ..> NamedThing : subclass_of ReferenceDataOrDataset : url","title":"Class: ReferenceDataOrDataset"},{"location":"ReferenceDataOrDataset/#inheritance","text":"NamedThing DataStandardOrTool ReferenceDataOrDataset","title":"Inheritance"},{"location":"ReferenceDataOrDataset/#slots","text":"Name Cardinality and Range Description Inheritance collection 0..* StandardsCollectionTag Tags for specific sets of standards DataStandardOrTool concerns_data_topic 0..* DataTopic Subject standard is generally applied in the context of object data topic DataStandardOrTool has_relevant_organization 0..* Organization Subject standard is managed or otherwise guided buy the object organization(s... DataStandardOrTool purpose_detail 0..1 String Text description of the standard or tool DataStandardOrTool is_open 0..1 Boolean Is the standard or tool FAIR and available free of cost? DataStandardOrTool requires_registration 0..1 Boolean Does usage of the standard or tool require registrion of a user or group with... DataStandardOrTool url 0..1 Uriorcurie URL for basic documentation of the standard or tool DataStandardOrTool publication 0..1 Uriorcurie Relevant publication for the standard or tool DataStandardOrTool formal_specification 0..1 Uriorcurie Relevant code repository or other location for a formal specification of the ... DataStandardOrTool not_relevant_to_dgps 0..1 Boolean Is the standard or tool currently relevant to DGPs? DataStandardOrTool id 1..1 Uriorcurie A unique identifier for a thing NamedThing category 0..1 CategoryType Name of the high level ontology class in which this entity is categorized NamedThing name 0..1 String A human-readable name for a thing NamedThing description 0..1 String A human-readable description for a thing NamedThing subclass_of 0..* NamedThing Holds between two classes where the domain class is a specialization of the r... NamedThing related_to 0..* NamedThing A relationship that is asserted between two named things NamedThing contributor_name 0..1 String The name of the person who added this node NamedThing contributor_github_name 0..1 String The name of the github user who added this node NamedThing contributor_orcid 0..1 Uriorcurie The ORCiD of the person who added this node NamedThing contribution_date 0..1 Date The date on which the node was added NamedThing","title":"Slots"},{"location":"ReferenceDataOrDataset/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"ReferenceDataOrDataset/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"ReferenceDataOrDataset/#mappings","text":"Mapping Type Mapped Value self https://w3id.org/bridge2ai/standards-schema-all/:ReferenceDataOrDataset native https://w3id.org/bridge2ai/standards-schema-all/:ReferenceDataOrDataset","title":"Mappings"},{"location":"ReferenceDataOrDataset/#linkml-source","text":"","title":"LinkML Source"},{"location":"ReferenceDataOrDataset/#direct","text":"name: ReferenceDataOrDataset description: Represents a resource in the Bridge2AI Standards Registry serving as a standardized, reusable data source. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: DataStandardOrTool","title":"Direct"},{"location":"ReferenceDataOrDataset/#induced","text":"name: ReferenceDataOrDataset description: Represents a resource in the Bridge2AI Standards Registry serving as a standardized, reusable data source. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: DataStandardOrTool attributes: collection: name: collection description: Tags for specific sets of standards. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing multivalued: true alias: collection owner: ReferenceDataOrDataset domain_of: - DataStandardOrTool range: StandardsCollectionTag concerns_data_topic: name: concerns_data_topic description: Subject standard is generally applied in the context of object data topic. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: related_to domain: DataStandardOrTool multivalued: true inherited: true alias: concerns_data_topic owner: ReferenceDataOrDataset domain_of: - DataStandardOrTool range: DataTopic has_relevant_organization: name: has_relevant_organization description: Subject standard is managed or otherwise guided buy the object organization(s). from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: related_to domain: DataStandardOrTool multivalued: true inherited: true alias: has_relevant_organization owner: ReferenceDataOrDataset domain_of: - DataStandardOrTool range: Organization purpose_detail: name: purpose_detail description: Text description of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: purpose_detail owner: ReferenceDataOrDataset domain_of: - DataStandardOrTool range: string is_open: name: is_open description: Is the standard or tool FAIR and available free of cost? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: is_open owner: ReferenceDataOrDataset domain_of: - DataStandardOrTool range: boolean requires_registration: name: requires_registration description: Does usage of the standard or tool require registrion of a user or group with some organization or managerial body? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: requires_registration owner: ReferenceDataOrDataset domain_of: - DataStandardOrTool range: boolean url: name: url description: URL for basic documentation of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: url owner: ReferenceDataOrDataset domain_of: - DataStandardOrTool - Organization range: uriorcurie publication: name: publication description: Relevant publication for the standard or tool. Prefer a DOI or PUBMED. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: publication owner: ReferenceDataOrDataset domain_of: - DataStandardOrTool range: uriorcurie formal_specification: name: formal_specification description: Relevant code repository or other location for a formal specification of the standard or tool. Often a URL, particularly to a Git repository. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: formal_specification owner: ReferenceDataOrDataset domain_of: - DataStandardOrTool range: uriorcurie not_relevant_to_dgps: name: not_relevant_to_dgps description: Is the standard or tool currently relevant to DGPs? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: not_relevant_to_dgps owner: ReferenceDataOrDataset domain_of: - DataStandardOrTool range: boolean id: name: id description: A unique identifier for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:identifier identifier: true alias: id owner: ReferenceDataOrDataset domain_of: - NamedThing range: uriorcurie required: true category: name: category description: Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\". from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: type domain: NamedThing designates_type: true alias: category owner: ReferenceDataOrDataset domain_of: - NamedThing range: category_type name: name: name description: A human-readable name for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:name alias: name owner: ReferenceDataOrDataset domain_of: - NamedThing range: string description: name: description description: A human-readable description for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:description alias: description owner: ReferenceDataOrDataset domain_of: - NamedThing range: string subclass_of: name: subclass_of description: Holds between two classes where the domain class is a specialization of the range class. from_schema: https://w3id.org/bridge2ai/standards-schema-all exact_mappings: - rdfs:subClassOf - MESH:isa narrow_mappings: - rdfs:subPropertyOf rank: 1000 is_a: related_to domain: NamedThing multivalued: true inherited: true alias: subclass_of owner: ReferenceDataOrDataset domain_of: - NamedThing range: NamedThing related_to: name: related_to description: A relationship that is asserted between two named things. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 domain: NamedThing multivalued: true inherited: true alias: related_to owner: ReferenceDataOrDataset domain_of: - NamedThing - Organization symmetric: true range: NamedThing contributor_name: name: contributor_name description: The name of the person who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_name owner: ReferenceDataOrDataset domain_of: - NamedThing range: string contributor_github_name: name: contributor_github_name description: The name of the github user who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_github_name owner: ReferenceDataOrDataset domain_of: - NamedThing range: string contributor_orcid: name: contributor_orcid description: The ORCiD of the person who added this node. examples: - value: ORCID:0000-0001-1234-5678 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_orcid owner: ReferenceDataOrDataset domain_of: - NamedThing range: uriorcurie contribution_date: name: contribution_date description: The date on which the node was added. examples: - value: '2023-03-20' from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contribution_date owner: ReferenceDataOrDataset domain_of: - NamedThing range: date","title":"Induced"},{"location":"ReferenceImplementation/","text":"Class: ReferenceImplementation Represents an implementation of one or more standards or tools in the Bridge2AI Standards Registry, whether as a full specification in a particular language or as an application to a specific use case. URI: https://w3id.org/bridge2ai/standards-schema-all/:ReferenceImplementation classDiagram class ReferenceImplementation DataStandardOrTool <|-- ReferenceImplementation ReferenceImplementation : category ReferenceImplementation : collection ReferenceImplementation ..> StandardsCollectionTag : collection ReferenceImplementation : concerns_data_topic ReferenceImplementation ..> DataTopic : concerns_data_topic ReferenceImplementation : contribution_date ReferenceImplementation : contributor_github_name ReferenceImplementation : contributor_name ReferenceImplementation : contributor_orcid ReferenceImplementation : description ReferenceImplementation : formal_specification ReferenceImplementation : has_relevant_organization ReferenceImplementation ..> Organization : has_relevant_organization ReferenceImplementation : id ReferenceImplementation : is_open ReferenceImplementation : name ReferenceImplementation : not_relevant_to_dgps ReferenceImplementation : publication ReferenceImplementation : purpose_detail ReferenceImplementation : related_to ReferenceImplementation ..> NamedThing : related_to ReferenceImplementation : requires_registration ReferenceImplementation : subclass_of ReferenceImplementation ..> NamedThing : subclass_of ReferenceImplementation : url Inheritance NamedThing DataStandardOrTool ReferenceImplementation Slots Name Cardinality and Range Description Inheritance collection 0..* StandardsCollectionTag Tags for specific sets of standards DataStandardOrTool concerns_data_topic 0..* DataTopic Subject standard is generally applied in the context of object data topic DataStandardOrTool has_relevant_organization 0..* Organization Subject standard is managed or otherwise guided buy the object organization(s... DataStandardOrTool purpose_detail 0..1 String Text description of the standard or tool DataStandardOrTool is_open 0..1 Boolean Is the standard or tool FAIR and available free of cost? DataStandardOrTool requires_registration 0..1 Boolean Does usage of the standard or tool require registrion of a user or group with... DataStandardOrTool url 0..1 Uriorcurie URL for basic documentation of the standard or tool DataStandardOrTool publication 0..1 Uriorcurie Relevant publication for the standard or tool DataStandardOrTool formal_specification 0..1 Uriorcurie Relevant code repository or other location for a formal specification of the ... DataStandardOrTool not_relevant_to_dgps 0..1 Boolean Is the standard or tool currently relevant to DGPs? DataStandardOrTool id 1..1 Uriorcurie A unique identifier for a thing NamedThing category 0..1 CategoryType Name of the high level ontology class in which this entity is categorized NamedThing name 0..1 String A human-readable name for a thing NamedThing description 0..1 String A human-readable description for a thing NamedThing subclass_of 0..* NamedThing Holds between two classes where the domain class is a specialization of the r... NamedThing related_to 0..* NamedThing A relationship that is asserted between two named things NamedThing contributor_name 0..1 String The name of the person who added this node NamedThing contributor_github_name 0..1 String The name of the github user who added this node NamedThing contributor_orcid 0..1 Uriorcurie The ORCiD of the person who added this node NamedThing contribution_date 0..1 Date The date on which the node was added NamedThing Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all Mappings Mapping Type Mapped Value self https://w3id.org/bridge2ai/standards-schema-all/:ReferenceImplementation native https://w3id.org/bridge2ai/standards-schema-all/:ReferenceImplementation LinkML Source Direct name: ReferenceImplementation description: Represents an implementation of one or more standards or tools in the Bridge2AI Standards Registry, whether as a full specification in a particular language or as an application to a specific use case. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: DataStandardOrTool Induced name: ReferenceImplementation description: Represents an implementation of one or more standards or tools in the Bridge2AI Standards Registry, whether as a full specification in a particular language or as an application to a specific use case. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: DataStandardOrTool attributes: collection: name: collection description: Tags for specific sets of standards. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing multivalued: true alias: collection owner: ReferenceImplementation domain_of: - DataStandardOrTool range: StandardsCollectionTag concerns_data_topic: name: concerns_data_topic description: Subject standard is generally applied in the context of object data topic. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: related_to domain: DataStandardOrTool multivalued: true inherited: true alias: concerns_data_topic owner: ReferenceImplementation domain_of: - DataStandardOrTool range: DataTopic has_relevant_organization: name: has_relevant_organization description: Subject standard is managed or otherwise guided buy the object organization(s). from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: related_to domain: DataStandardOrTool multivalued: true inherited: true alias: has_relevant_organization owner: ReferenceImplementation domain_of: - DataStandardOrTool range: Organization purpose_detail: name: purpose_detail description: Text description of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: purpose_detail owner: ReferenceImplementation domain_of: - DataStandardOrTool range: string is_open: name: is_open description: Is the standard or tool FAIR and available free of cost? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: is_open owner: ReferenceImplementation domain_of: - DataStandardOrTool range: boolean requires_registration: name: requires_registration description: Does usage of the standard or tool require registrion of a user or group with some organization or managerial body? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: requires_registration owner: ReferenceImplementation domain_of: - DataStandardOrTool range: boolean url: name: url description: URL for basic documentation of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: url owner: ReferenceImplementation domain_of: - DataStandardOrTool - Organization range: uriorcurie publication: name: publication description: Relevant publication for the standard or tool. Prefer a DOI or PUBMED. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: publication owner: ReferenceImplementation domain_of: - DataStandardOrTool range: uriorcurie formal_specification: name: formal_specification description: Relevant code repository or other location for a formal specification of the standard or tool. Often a URL, particularly to a Git repository. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: formal_specification owner: ReferenceImplementation domain_of: - DataStandardOrTool range: uriorcurie not_relevant_to_dgps: name: not_relevant_to_dgps description: Is the standard or tool currently relevant to DGPs? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: not_relevant_to_dgps owner: ReferenceImplementation domain_of: - DataStandardOrTool range: boolean id: name: id description: A unique identifier for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:identifier identifier: true alias: id owner: ReferenceImplementation domain_of: - NamedThing range: uriorcurie required: true category: name: category description: Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\". from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: type domain: NamedThing designates_type: true alias: category owner: ReferenceImplementation domain_of: - NamedThing range: category_type name: name: name description: A human-readable name for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:name alias: name owner: ReferenceImplementation domain_of: - NamedThing range: string description: name: description description: A human-readable description for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:description alias: description owner: ReferenceImplementation domain_of: - NamedThing range: string subclass_of: name: subclass_of description: Holds between two classes where the domain class is a specialization of the range class. from_schema: https://w3id.org/bridge2ai/standards-schema-all exact_mappings: - rdfs:subClassOf - MESH:isa narrow_mappings: - rdfs:subPropertyOf rank: 1000 is_a: related_to domain: NamedThing multivalued: true inherited: true alias: subclass_of owner: ReferenceImplementation domain_of: - NamedThing range: NamedThing related_to: name: related_to description: A relationship that is asserted between two named things. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 domain: NamedThing multivalued: true inherited: true alias: related_to owner: ReferenceImplementation domain_of: - NamedThing - Organization symmetric: true range: NamedThing contributor_name: name: contributor_name description: The name of the person who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_name owner: ReferenceImplementation domain_of: - NamedThing range: string contributor_github_name: name: contributor_github_name description: The name of the github user who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_github_name owner: ReferenceImplementation domain_of: - NamedThing range: string contributor_orcid: name: contributor_orcid description: The ORCiD of the person who added this node. examples: - value: ORCID:0000-0001-1234-5678 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_orcid owner: ReferenceImplementation domain_of: - NamedThing range: uriorcurie contribution_date: name: contribution_date description: The date on which the node was added. examples: - value: '2023-03-20' from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contribution_date owner: ReferenceImplementation domain_of: - NamedThing range: date","title":"Class: ReferenceImplementation"},{"location":"ReferenceImplementation/#class-referenceimplementation","text":"Represents an implementation of one or more standards or tools in the Bridge2AI Standards Registry, whether as a full specification in a particular language or as an application to a specific use case. URI: https://w3id.org/bridge2ai/standards-schema-all/:ReferenceImplementation classDiagram class ReferenceImplementation DataStandardOrTool <|-- ReferenceImplementation ReferenceImplementation : category ReferenceImplementation : collection ReferenceImplementation ..> StandardsCollectionTag : collection ReferenceImplementation : concerns_data_topic ReferenceImplementation ..> DataTopic : concerns_data_topic ReferenceImplementation : contribution_date ReferenceImplementation : contributor_github_name ReferenceImplementation : contributor_name ReferenceImplementation : contributor_orcid ReferenceImplementation : description ReferenceImplementation : formal_specification ReferenceImplementation : has_relevant_organization ReferenceImplementation ..> Organization : has_relevant_organization ReferenceImplementation : id ReferenceImplementation : is_open ReferenceImplementation : name ReferenceImplementation : not_relevant_to_dgps ReferenceImplementation : publication ReferenceImplementation : purpose_detail ReferenceImplementation : related_to ReferenceImplementation ..> NamedThing : related_to ReferenceImplementation : requires_registration ReferenceImplementation : subclass_of ReferenceImplementation ..> NamedThing : subclass_of ReferenceImplementation : url","title":"Class: ReferenceImplementation"},{"location":"ReferenceImplementation/#inheritance","text":"NamedThing DataStandardOrTool ReferenceImplementation","title":"Inheritance"},{"location":"ReferenceImplementation/#slots","text":"Name Cardinality and Range Description Inheritance collection 0..* StandardsCollectionTag Tags for specific sets of standards DataStandardOrTool concerns_data_topic 0..* DataTopic Subject standard is generally applied in the context of object data topic DataStandardOrTool has_relevant_organization 0..* Organization Subject standard is managed or otherwise guided buy the object organization(s... DataStandardOrTool purpose_detail 0..1 String Text description of the standard or tool DataStandardOrTool is_open 0..1 Boolean Is the standard or tool FAIR and available free of cost? DataStandardOrTool requires_registration 0..1 Boolean Does usage of the standard or tool require registrion of a user or group with... DataStandardOrTool url 0..1 Uriorcurie URL for basic documentation of the standard or tool DataStandardOrTool publication 0..1 Uriorcurie Relevant publication for the standard or tool DataStandardOrTool formal_specification 0..1 Uriorcurie Relevant code repository or other location for a formal specification of the ... DataStandardOrTool not_relevant_to_dgps 0..1 Boolean Is the standard or tool currently relevant to DGPs? DataStandardOrTool id 1..1 Uriorcurie A unique identifier for a thing NamedThing category 0..1 CategoryType Name of the high level ontology class in which this entity is categorized NamedThing name 0..1 String A human-readable name for a thing NamedThing description 0..1 String A human-readable description for a thing NamedThing subclass_of 0..* NamedThing Holds between two classes where the domain class is a specialization of the r... NamedThing related_to 0..* NamedThing A relationship that is asserted between two named things NamedThing contributor_name 0..1 String The name of the person who added this node NamedThing contributor_github_name 0..1 String The name of the github user who added this node NamedThing contributor_orcid 0..1 Uriorcurie The ORCiD of the person who added this node NamedThing contribution_date 0..1 Date The date on which the node was added NamedThing","title":"Slots"},{"location":"ReferenceImplementation/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"ReferenceImplementation/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"ReferenceImplementation/#mappings","text":"Mapping Type Mapped Value self https://w3id.org/bridge2ai/standards-schema-all/:ReferenceImplementation native https://w3id.org/bridge2ai/standards-schema-all/:ReferenceImplementation","title":"Mappings"},{"location":"ReferenceImplementation/#linkml-source","text":"","title":"LinkML Source"},{"location":"ReferenceImplementation/#direct","text":"name: ReferenceImplementation description: Represents an implementation of one or more standards or tools in the Bridge2AI Standards Registry, whether as a full specification in a particular language or as an application to a specific use case. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: DataStandardOrTool","title":"Direct"},{"location":"ReferenceImplementation/#induced","text":"name: ReferenceImplementation description: Represents an implementation of one or more standards or tools in the Bridge2AI Standards Registry, whether as a full specification in a particular language or as an application to a specific use case. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: DataStandardOrTool attributes: collection: name: collection description: Tags for specific sets of standards. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing multivalued: true alias: collection owner: ReferenceImplementation domain_of: - DataStandardOrTool range: StandardsCollectionTag concerns_data_topic: name: concerns_data_topic description: Subject standard is generally applied in the context of object data topic. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: related_to domain: DataStandardOrTool multivalued: true inherited: true alias: concerns_data_topic owner: ReferenceImplementation domain_of: - DataStandardOrTool range: DataTopic has_relevant_organization: name: has_relevant_organization description: Subject standard is managed or otherwise guided buy the object organization(s). from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: related_to domain: DataStandardOrTool multivalued: true inherited: true alias: has_relevant_organization owner: ReferenceImplementation domain_of: - DataStandardOrTool range: Organization purpose_detail: name: purpose_detail description: Text description of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: purpose_detail owner: ReferenceImplementation domain_of: - DataStandardOrTool range: string is_open: name: is_open description: Is the standard or tool FAIR and available free of cost? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: is_open owner: ReferenceImplementation domain_of: - DataStandardOrTool range: boolean requires_registration: name: requires_registration description: Does usage of the standard or tool require registrion of a user or group with some organization or managerial body? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: requires_registration owner: ReferenceImplementation domain_of: - DataStandardOrTool range: boolean url: name: url description: URL for basic documentation of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: url owner: ReferenceImplementation domain_of: - DataStandardOrTool - Organization range: uriorcurie publication: name: publication description: Relevant publication for the standard or tool. Prefer a DOI or PUBMED. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: publication owner: ReferenceImplementation domain_of: - DataStandardOrTool range: uriorcurie formal_specification: name: formal_specification description: Relevant code repository or other location for a formal specification of the standard or tool. Often a URL, particularly to a Git repository. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: formal_specification owner: ReferenceImplementation domain_of: - DataStandardOrTool range: uriorcurie not_relevant_to_dgps: name: not_relevant_to_dgps description: Is the standard or tool currently relevant to DGPs? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: not_relevant_to_dgps owner: ReferenceImplementation domain_of: - DataStandardOrTool range: boolean id: name: id description: A unique identifier for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:identifier identifier: true alias: id owner: ReferenceImplementation domain_of: - NamedThing range: uriorcurie required: true category: name: category description: Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\". from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: type domain: NamedThing designates_type: true alias: category owner: ReferenceImplementation domain_of: - NamedThing range: category_type name: name: name description: A human-readable name for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:name alias: name owner: ReferenceImplementation domain_of: - NamedThing range: string description: name: description description: A human-readable description for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:description alias: description owner: ReferenceImplementation domain_of: - NamedThing range: string subclass_of: name: subclass_of description: Holds between two classes where the domain class is a specialization of the range class. from_schema: https://w3id.org/bridge2ai/standards-schema-all exact_mappings: - rdfs:subClassOf - MESH:isa narrow_mappings: - rdfs:subPropertyOf rank: 1000 is_a: related_to domain: NamedThing multivalued: true inherited: true alias: subclass_of owner: ReferenceImplementation domain_of: - NamedThing range: NamedThing related_to: name: related_to description: A relationship that is asserted between two named things. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 domain: NamedThing multivalued: true inherited: true alias: related_to owner: ReferenceImplementation domain_of: - NamedThing - Organization symmetric: true range: NamedThing contributor_name: name: contributor_name description: The name of the person who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_name owner: ReferenceImplementation domain_of: - NamedThing range: string contributor_github_name: name: contributor_github_name description: The name of the github user who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_github_name owner: ReferenceImplementation domain_of: - NamedThing range: string contributor_orcid: name: contributor_orcid description: The ORCiD of the person who added this node. examples: - value: ORCID:0000-0001-1234-5678 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_orcid owner: ReferenceImplementation domain_of: - NamedThing range: uriorcurie contribution_date: name: contribution_date description: The date on which the node was added. examples: - value: '2023-03-20' from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contribution_date owner: ReferenceImplementation domain_of: - NamedThing range: date","title":"Induced"},{"location":"Registry/","text":"Class: Registry Represents a resource in the Bridge2AI Standards Registry serving to curate and/or index other resources. URI: https://w3id.org/bridge2ai/standards-schema-all/:Registry classDiagram class Registry DataStandardOrTool <|-- Registry Registry : category Registry : collection Registry ..> StandardsCollectionTag : collection Registry : concerns_data_topic Registry ..> DataTopic : concerns_data_topic Registry : contribution_date Registry : contributor_github_name Registry : contributor_name Registry : contributor_orcid Registry : description Registry : formal_specification Registry : has_relevant_organization Registry ..> Organization : has_relevant_organization Registry : id Registry : is_open Registry : name Registry : not_relevant_to_dgps Registry : publication Registry : purpose_detail Registry : related_to Registry ..> NamedThing : related_to Registry : requires_registration Registry : subclass_of Registry ..> NamedThing : subclass_of Registry : url Inheritance NamedThing DataStandardOrTool Registry Slots Name Cardinality and Range Description Inheritance collection 0..* StandardsCollectionTag Tags for specific sets of standards DataStandardOrTool concerns_data_topic 0..* DataTopic Subject standard is generally applied in the context of object data topic DataStandardOrTool has_relevant_organization 0..* Organization Subject standard is managed or otherwise guided buy the object organization(s... DataStandardOrTool purpose_detail 0..1 String Text description of the standard or tool DataStandardOrTool is_open 0..1 Boolean Is the standard or tool FAIR and available free of cost? DataStandardOrTool requires_registration 0..1 Boolean Does usage of the standard or tool require registrion of a user or group with... DataStandardOrTool url 0..1 Uriorcurie URL for basic documentation of the standard or tool DataStandardOrTool publication 0..1 Uriorcurie Relevant publication for the standard or tool DataStandardOrTool formal_specification 0..1 Uriorcurie Relevant code repository or other location for a formal specification of the ... DataStandardOrTool not_relevant_to_dgps 0..1 Boolean Is the standard or tool currently relevant to DGPs? DataStandardOrTool id 1..1 Uriorcurie A unique identifier for a thing NamedThing category 0..1 CategoryType Name of the high level ontology class in which this entity is categorized NamedThing name 0..1 String A human-readable name for a thing NamedThing description 0..1 String A human-readable description for a thing NamedThing subclass_of 0..* NamedThing Holds between two classes where the domain class is a specialization of the r... NamedThing related_to 0..* NamedThing A relationship that is asserted between two named things NamedThing contributor_name 0..1 String The name of the person who added this node NamedThing contributor_github_name 0..1 String The name of the github user who added this node NamedThing contributor_orcid 0..1 Uriorcurie The ORCiD of the person who added this node NamedThing contribution_date 0..1 Date The date on which the node was added NamedThing Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all Mappings Mapping Type Mapped Value self https://w3id.org/bridge2ai/standards-schema-all/:Registry native https://w3id.org/bridge2ai/standards-schema-all/:Registry LinkML Source Direct name: Registry description: Represents a resource in the Bridge2AI Standards Registry serving to curate and/or index other resources. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: DataStandardOrTool Induced name: Registry description: Represents a resource in the Bridge2AI Standards Registry serving to curate and/or index other resources. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: DataStandardOrTool attributes: collection: name: collection description: Tags for specific sets of standards. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing multivalued: true alias: collection owner: Registry domain_of: - DataStandardOrTool range: StandardsCollectionTag concerns_data_topic: name: concerns_data_topic description: Subject standard is generally applied in the context of object data topic. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: related_to domain: DataStandardOrTool multivalued: true inherited: true alias: concerns_data_topic owner: Registry domain_of: - DataStandardOrTool range: DataTopic has_relevant_organization: name: has_relevant_organization description: Subject standard is managed or otherwise guided buy the object organization(s). from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: related_to domain: DataStandardOrTool multivalued: true inherited: true alias: has_relevant_organization owner: Registry domain_of: - DataStandardOrTool range: Organization purpose_detail: name: purpose_detail description: Text description of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: purpose_detail owner: Registry domain_of: - DataStandardOrTool range: string is_open: name: is_open description: Is the standard or tool FAIR and available free of cost? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: is_open owner: Registry domain_of: - DataStandardOrTool range: boolean requires_registration: name: requires_registration description: Does usage of the standard or tool require registrion of a user or group with some organization or managerial body? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: requires_registration owner: Registry domain_of: - DataStandardOrTool range: boolean url: name: url description: URL for basic documentation of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: url owner: Registry domain_of: - DataStandardOrTool - Organization range: uriorcurie publication: name: publication description: Relevant publication for the standard or tool. Prefer a DOI or PUBMED. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: publication owner: Registry domain_of: - DataStandardOrTool range: uriorcurie formal_specification: name: formal_specification description: Relevant code repository or other location for a formal specification of the standard or tool. Often a URL, particularly to a Git repository. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: formal_specification owner: Registry domain_of: - DataStandardOrTool range: uriorcurie not_relevant_to_dgps: name: not_relevant_to_dgps description: Is the standard or tool currently relevant to DGPs? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: not_relevant_to_dgps owner: Registry domain_of: - DataStandardOrTool range: boolean id: name: id description: A unique identifier for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:identifier identifier: true alias: id owner: Registry domain_of: - NamedThing range: uriorcurie required: true category: name: category description: Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\". from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: type domain: NamedThing designates_type: true alias: category owner: Registry domain_of: - NamedThing range: category_type name: name: name description: A human-readable name for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:name alias: name owner: Registry domain_of: - NamedThing range: string description: name: description description: A human-readable description for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:description alias: description owner: Registry domain_of: - NamedThing range: string subclass_of: name: subclass_of description: Holds between two classes where the domain class is a specialization of the range class. from_schema: https://w3id.org/bridge2ai/standards-schema-all exact_mappings: - rdfs:subClassOf - MESH:isa narrow_mappings: - rdfs:subPropertyOf rank: 1000 is_a: related_to domain: NamedThing multivalued: true inherited: true alias: subclass_of owner: Registry domain_of: - NamedThing range: NamedThing related_to: name: related_to description: A relationship that is asserted between two named things. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 domain: NamedThing multivalued: true inherited: true alias: related_to owner: Registry domain_of: - NamedThing - Organization symmetric: true range: NamedThing contributor_name: name: contributor_name description: The name of the person who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_name owner: Registry domain_of: - NamedThing range: string contributor_github_name: name: contributor_github_name description: The name of the github user who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_github_name owner: Registry domain_of: - NamedThing range: string contributor_orcid: name: contributor_orcid description: The ORCiD of the person who added this node. examples: - value: ORCID:0000-0001-1234-5678 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_orcid owner: Registry domain_of: - NamedThing range: uriorcurie contribution_date: name: contribution_date description: The date on which the node was added. examples: - value: '2023-03-20' from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contribution_date owner: Registry domain_of: - NamedThing range: date","title":"Class: Registry"},{"location":"Registry/#class-registry","text":"Represents a resource in the Bridge2AI Standards Registry serving to curate and/or index other resources. URI: https://w3id.org/bridge2ai/standards-schema-all/:Registry classDiagram class Registry DataStandardOrTool <|-- Registry Registry : category Registry : collection Registry ..> StandardsCollectionTag : collection Registry : concerns_data_topic Registry ..> DataTopic : concerns_data_topic Registry : contribution_date Registry : contributor_github_name Registry : contributor_name Registry : contributor_orcid Registry : description Registry : formal_specification Registry : has_relevant_organization Registry ..> Organization : has_relevant_organization Registry : id Registry : is_open Registry : name Registry : not_relevant_to_dgps Registry : publication Registry : purpose_detail Registry : related_to Registry ..> NamedThing : related_to Registry : requires_registration Registry : subclass_of Registry ..> NamedThing : subclass_of Registry : url","title":"Class: Registry"},{"location":"Registry/#inheritance","text":"NamedThing DataStandardOrTool Registry","title":"Inheritance"},{"location":"Registry/#slots","text":"Name Cardinality and Range Description Inheritance collection 0..* StandardsCollectionTag Tags for specific sets of standards DataStandardOrTool concerns_data_topic 0..* DataTopic Subject standard is generally applied in the context of object data topic DataStandardOrTool has_relevant_organization 0..* Organization Subject standard is managed or otherwise guided buy the object organization(s... DataStandardOrTool purpose_detail 0..1 String Text description of the standard or tool DataStandardOrTool is_open 0..1 Boolean Is the standard or tool FAIR and available free of cost? DataStandardOrTool requires_registration 0..1 Boolean Does usage of the standard or tool require registrion of a user or group with... DataStandardOrTool url 0..1 Uriorcurie URL for basic documentation of the standard or tool DataStandardOrTool publication 0..1 Uriorcurie Relevant publication for the standard or tool DataStandardOrTool formal_specification 0..1 Uriorcurie Relevant code repository or other location for a formal specification of the ... DataStandardOrTool not_relevant_to_dgps 0..1 Boolean Is the standard or tool currently relevant to DGPs? DataStandardOrTool id 1..1 Uriorcurie A unique identifier for a thing NamedThing category 0..1 CategoryType Name of the high level ontology class in which this entity is categorized NamedThing name 0..1 String A human-readable name for a thing NamedThing description 0..1 String A human-readable description for a thing NamedThing subclass_of 0..* NamedThing Holds between two classes where the domain class is a specialization of the r... NamedThing related_to 0..* NamedThing A relationship that is asserted between two named things NamedThing contributor_name 0..1 String The name of the person who added this node NamedThing contributor_github_name 0..1 String The name of the github user who added this node NamedThing contributor_orcid 0..1 Uriorcurie The ORCiD of the person who added this node NamedThing contribution_date 0..1 Date The date on which the node was added NamedThing","title":"Slots"},{"location":"Registry/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Registry/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"Registry/#mappings","text":"Mapping Type Mapped Value self https://w3id.org/bridge2ai/standards-schema-all/:Registry native https://w3id.org/bridge2ai/standards-schema-all/:Registry","title":"Mappings"},{"location":"Registry/#linkml-source","text":"","title":"LinkML Source"},{"location":"Registry/#direct","text":"name: Registry description: Represents a resource in the Bridge2AI Standards Registry serving to curate and/or index other resources. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: DataStandardOrTool","title":"Direct"},{"location":"Registry/#induced","text":"name: Registry description: Represents a resource in the Bridge2AI Standards Registry serving to curate and/or index other resources. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: DataStandardOrTool attributes: collection: name: collection description: Tags for specific sets of standards. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing multivalued: true alias: collection owner: Registry domain_of: - DataStandardOrTool range: StandardsCollectionTag concerns_data_topic: name: concerns_data_topic description: Subject standard is generally applied in the context of object data topic. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: related_to domain: DataStandardOrTool multivalued: true inherited: true alias: concerns_data_topic owner: Registry domain_of: - DataStandardOrTool range: DataTopic has_relevant_organization: name: has_relevant_organization description: Subject standard is managed or otherwise guided buy the object organization(s). from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: related_to domain: DataStandardOrTool multivalued: true inherited: true alias: has_relevant_organization owner: Registry domain_of: - DataStandardOrTool range: Organization purpose_detail: name: purpose_detail description: Text description of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: purpose_detail owner: Registry domain_of: - DataStandardOrTool range: string is_open: name: is_open description: Is the standard or tool FAIR and available free of cost? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: is_open owner: Registry domain_of: - DataStandardOrTool range: boolean requires_registration: name: requires_registration description: Does usage of the standard or tool require registrion of a user or group with some organization or managerial body? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: requires_registration owner: Registry domain_of: - DataStandardOrTool range: boolean url: name: url description: URL for basic documentation of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: url owner: Registry domain_of: - DataStandardOrTool - Organization range: uriorcurie publication: name: publication description: Relevant publication for the standard or tool. Prefer a DOI or PUBMED. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: publication owner: Registry domain_of: - DataStandardOrTool range: uriorcurie formal_specification: name: formal_specification description: Relevant code repository or other location for a formal specification of the standard or tool. Often a URL, particularly to a Git repository. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: formal_specification owner: Registry domain_of: - DataStandardOrTool range: uriorcurie not_relevant_to_dgps: name: not_relevant_to_dgps description: Is the standard or tool currently relevant to DGPs? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: not_relevant_to_dgps owner: Registry domain_of: - DataStandardOrTool range: boolean id: name: id description: A unique identifier for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:identifier identifier: true alias: id owner: Registry domain_of: - NamedThing range: uriorcurie required: true category: name: category description: Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\". from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: type domain: NamedThing designates_type: true alias: category owner: Registry domain_of: - NamedThing range: category_type name: name: name description: A human-readable name for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:name alias: name owner: Registry domain_of: - NamedThing range: string description: name: description description: A human-readable description for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:description alias: description owner: Registry domain_of: - NamedThing range: string subclass_of: name: subclass_of description: Holds between two classes where the domain class is a specialization of the range class. from_schema: https://w3id.org/bridge2ai/standards-schema-all exact_mappings: - rdfs:subClassOf - MESH:isa narrow_mappings: - rdfs:subPropertyOf rank: 1000 is_a: related_to domain: NamedThing multivalued: true inherited: true alias: subclass_of owner: Registry domain_of: - NamedThing range: NamedThing related_to: name: related_to description: A relationship that is asserted between two named things. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 domain: NamedThing multivalued: true inherited: true alias: related_to owner: Registry domain_of: - NamedThing - Organization symmetric: true range: NamedThing contributor_name: name: contributor_name description: The name of the person who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_name owner: Registry domain_of: - NamedThing range: string contributor_github_name: name: contributor_github_name description: The name of the github user who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_github_name owner: Registry domain_of: - NamedThing range: string contributor_orcid: name: contributor_orcid description: The ORCiD of the person who added this node. examples: - value: ORCID:0000-0001-1234-5678 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_orcid owner: Registry domain_of: - NamedThing range: uriorcurie contribution_date: name: contribution_date description: The date on which the node was added. examples: - value: '2023-03-20' from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contribution_date owner: Registry domain_of: - NamedThing range: date","title":"Induced"},{"location":"RorIdentifier/","text":"Type: RorIdentifier Identifier from Research Organization Registry. URI: xsd:anyURI base : URIorCURIE uri : xsd:anyURI repr : str typeof : uriorcurie Identifier and Mapping Information Valid ID Prefixes Instances of this class should have identifiers with one of the following prefixes: ror Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Type: RorIdentifier"},{"location":"RorIdentifier/#type-roridentifier","text":"Identifier from Research Organization Registry. URI: xsd:anyURI base : URIorCURIE uri : xsd:anyURI repr : str typeof : uriorcurie","title":"Type: RorIdentifier"},{"location":"RorIdentifier/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"RorIdentifier/#valid-id-prefixes","text":"Instances of this class should have identifiers with one of the following prefixes: ror","title":"Valid ID Prefixes"},{"location":"RorIdentifier/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"SoftwareOrTool/","text":"Class: SoftwareOrTool Represents a piece of software or computational tool in the Bridge2AI Standards Registry. URI: https://w3id.org/bridge2ai/standards-schema-all/:SoftwareOrTool classDiagram class SoftwareOrTool DataStandardOrTool <|-- SoftwareOrTool SoftwareOrTool : category SoftwareOrTool : collection SoftwareOrTool ..> StandardsCollectionTag : collection SoftwareOrTool : concerns_data_topic SoftwareOrTool ..> DataTopic : concerns_data_topic SoftwareOrTool : contribution_date SoftwareOrTool : contributor_github_name SoftwareOrTool : contributor_name SoftwareOrTool : contributor_orcid SoftwareOrTool : description SoftwareOrTool : formal_specification SoftwareOrTool : has_relevant_organization SoftwareOrTool ..> Organization : has_relevant_organization SoftwareOrTool : id SoftwareOrTool : is_open SoftwareOrTool : name SoftwareOrTool : not_relevant_to_dgps SoftwareOrTool : publication SoftwareOrTool : purpose_detail SoftwareOrTool : related_to SoftwareOrTool ..> NamedThing : related_to SoftwareOrTool : requires_registration SoftwareOrTool : subclass_of SoftwareOrTool ..> NamedThing : subclass_of SoftwareOrTool : url Inheritance NamedThing DataStandardOrTool SoftwareOrTool Slots Name Cardinality and Range Description Inheritance collection 0..* StandardsCollectionTag Tags for specific sets of standards DataStandardOrTool concerns_data_topic 0..* DataTopic Subject standard is generally applied in the context of object data topic DataStandardOrTool has_relevant_organization 0..* Organization Subject standard is managed or otherwise guided buy the object organization(s... DataStandardOrTool purpose_detail 0..1 String Text description of the standard or tool DataStandardOrTool is_open 0..1 Boolean Is the standard or tool FAIR and available free of cost? DataStandardOrTool requires_registration 0..1 Boolean Does usage of the standard or tool require registrion of a user or group with... DataStandardOrTool url 0..1 Uriorcurie URL for basic documentation of the standard or tool DataStandardOrTool publication 0..1 Uriorcurie Relevant publication for the standard or tool DataStandardOrTool formal_specification 0..1 Uriorcurie Relevant code repository or other location for a formal specification of the ... DataStandardOrTool not_relevant_to_dgps 0..1 Boolean Is the standard or tool currently relevant to DGPs? DataStandardOrTool id 1..1 Uriorcurie A unique identifier for a thing NamedThing category 0..1 CategoryType Name of the high level ontology class in which this entity is categorized NamedThing name 0..1 String A human-readable name for a thing NamedThing description 0..1 String A human-readable description for a thing NamedThing subclass_of 0..* NamedThing Holds between two classes where the domain class is a specialization of the r... NamedThing related_to 0..* NamedThing A relationship that is asserted between two named things NamedThing contributor_name 0..1 String The name of the person who added this node NamedThing contributor_github_name 0..1 String The name of the github user who added this node NamedThing contributor_orcid 0..1 Uriorcurie The ORCiD of the person who added this node NamedThing contribution_date 0..1 Date The date on which the node was added NamedThing Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all Mappings Mapping Type Mapped Value self https://w3id.org/bridge2ai/standards-schema-all/:SoftwareOrTool native https://w3id.org/bridge2ai/standards-schema-all/:SoftwareOrTool LinkML Source Direct name: SoftwareOrTool description: Represents a piece of software or computational tool in the Bridge2AI Standards Registry. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: DataStandardOrTool Induced name: SoftwareOrTool description: Represents a piece of software or computational tool in the Bridge2AI Standards Registry. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: DataStandardOrTool attributes: collection: name: collection description: Tags for specific sets of standards. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing multivalued: true alias: collection owner: SoftwareOrTool domain_of: - DataStandardOrTool range: StandardsCollectionTag concerns_data_topic: name: concerns_data_topic description: Subject standard is generally applied in the context of object data topic. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: related_to domain: DataStandardOrTool multivalued: true inherited: true alias: concerns_data_topic owner: SoftwareOrTool domain_of: - DataStandardOrTool range: DataTopic has_relevant_organization: name: has_relevant_organization description: Subject standard is managed or otherwise guided buy the object organization(s). from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: related_to domain: DataStandardOrTool multivalued: true inherited: true alias: has_relevant_organization owner: SoftwareOrTool domain_of: - DataStandardOrTool range: Organization purpose_detail: name: purpose_detail description: Text description of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: purpose_detail owner: SoftwareOrTool domain_of: - DataStandardOrTool range: string is_open: name: is_open description: Is the standard or tool FAIR and available free of cost? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: is_open owner: SoftwareOrTool domain_of: - DataStandardOrTool range: boolean requires_registration: name: requires_registration description: Does usage of the standard or tool require registrion of a user or group with some organization or managerial body? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: requires_registration owner: SoftwareOrTool domain_of: - DataStandardOrTool range: boolean url: name: url description: URL for basic documentation of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: url owner: SoftwareOrTool domain_of: - DataStandardOrTool - Organization range: uriorcurie publication: name: publication description: Relevant publication for the standard or tool. Prefer a DOI or PUBMED. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: publication owner: SoftwareOrTool domain_of: - DataStandardOrTool range: uriorcurie formal_specification: name: formal_specification description: Relevant code repository or other location for a formal specification of the standard or tool. Often a URL, particularly to a Git repository. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: formal_specification owner: SoftwareOrTool domain_of: - DataStandardOrTool range: uriorcurie not_relevant_to_dgps: name: not_relevant_to_dgps description: Is the standard or tool currently relevant to DGPs? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: not_relevant_to_dgps owner: SoftwareOrTool domain_of: - DataStandardOrTool range: boolean id: name: id description: A unique identifier for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:identifier identifier: true alias: id owner: SoftwareOrTool domain_of: - NamedThing range: uriorcurie required: true category: name: category description: Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\". from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: type domain: NamedThing designates_type: true alias: category owner: SoftwareOrTool domain_of: - NamedThing range: category_type name: name: name description: A human-readable name for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:name alias: name owner: SoftwareOrTool domain_of: - NamedThing range: string description: name: description description: A human-readable description for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:description alias: description owner: SoftwareOrTool domain_of: - NamedThing range: string subclass_of: name: subclass_of description: Holds between two classes where the domain class is a specialization of the range class. from_schema: https://w3id.org/bridge2ai/standards-schema-all exact_mappings: - rdfs:subClassOf - MESH:isa narrow_mappings: - rdfs:subPropertyOf rank: 1000 is_a: related_to domain: NamedThing multivalued: true inherited: true alias: subclass_of owner: SoftwareOrTool domain_of: - NamedThing range: NamedThing related_to: name: related_to description: A relationship that is asserted between two named things. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 domain: NamedThing multivalued: true inherited: true alias: related_to owner: SoftwareOrTool domain_of: - NamedThing - Organization symmetric: true range: NamedThing contributor_name: name: contributor_name description: The name of the person who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_name owner: SoftwareOrTool domain_of: - NamedThing range: string contributor_github_name: name: contributor_github_name description: The name of the github user who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_github_name owner: SoftwareOrTool domain_of: - NamedThing range: string contributor_orcid: name: contributor_orcid description: The ORCiD of the person who added this node. examples: - value: ORCID:0000-0001-1234-5678 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_orcid owner: SoftwareOrTool domain_of: - NamedThing range: uriorcurie contribution_date: name: contribution_date description: The date on which the node was added. examples: - value: '2023-03-20' from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contribution_date owner: SoftwareOrTool domain_of: - NamedThing range: date","title":"Class: SoftwareOrTool"},{"location":"SoftwareOrTool/#class-softwareortool","text":"Represents a piece of software or computational tool in the Bridge2AI Standards Registry. URI: https://w3id.org/bridge2ai/standards-schema-all/:SoftwareOrTool classDiagram class SoftwareOrTool DataStandardOrTool <|-- SoftwareOrTool SoftwareOrTool : category SoftwareOrTool : collection SoftwareOrTool ..> StandardsCollectionTag : collection SoftwareOrTool : concerns_data_topic SoftwareOrTool ..> DataTopic : concerns_data_topic SoftwareOrTool : contribution_date SoftwareOrTool : contributor_github_name SoftwareOrTool : contributor_name SoftwareOrTool : contributor_orcid SoftwareOrTool : description SoftwareOrTool : formal_specification SoftwareOrTool : has_relevant_organization SoftwareOrTool ..> Organization : has_relevant_organization SoftwareOrTool : id SoftwareOrTool : is_open SoftwareOrTool : name SoftwareOrTool : not_relevant_to_dgps SoftwareOrTool : publication SoftwareOrTool : purpose_detail SoftwareOrTool : related_to SoftwareOrTool ..> NamedThing : related_to SoftwareOrTool : requires_registration SoftwareOrTool : subclass_of SoftwareOrTool ..> NamedThing : subclass_of SoftwareOrTool : url","title":"Class: SoftwareOrTool"},{"location":"SoftwareOrTool/#inheritance","text":"NamedThing DataStandardOrTool SoftwareOrTool","title":"Inheritance"},{"location":"SoftwareOrTool/#slots","text":"Name Cardinality and Range Description Inheritance collection 0..* StandardsCollectionTag Tags for specific sets of standards DataStandardOrTool concerns_data_topic 0..* DataTopic Subject standard is generally applied in the context of object data topic DataStandardOrTool has_relevant_organization 0..* Organization Subject standard is managed or otherwise guided buy the object organization(s... DataStandardOrTool purpose_detail 0..1 String Text description of the standard or tool DataStandardOrTool is_open 0..1 Boolean Is the standard or tool FAIR and available free of cost? DataStandardOrTool requires_registration 0..1 Boolean Does usage of the standard or tool require registrion of a user or group with... DataStandardOrTool url 0..1 Uriorcurie URL for basic documentation of the standard or tool DataStandardOrTool publication 0..1 Uriorcurie Relevant publication for the standard or tool DataStandardOrTool formal_specification 0..1 Uriorcurie Relevant code repository or other location for a formal specification of the ... DataStandardOrTool not_relevant_to_dgps 0..1 Boolean Is the standard or tool currently relevant to DGPs? DataStandardOrTool id 1..1 Uriorcurie A unique identifier for a thing NamedThing category 0..1 CategoryType Name of the high level ontology class in which this entity is categorized NamedThing name 0..1 String A human-readable name for a thing NamedThing description 0..1 String A human-readable description for a thing NamedThing subclass_of 0..* NamedThing Holds between two classes where the domain class is a specialization of the r... NamedThing related_to 0..* NamedThing A relationship that is asserted between two named things NamedThing contributor_name 0..1 String The name of the person who added this node NamedThing contributor_github_name 0..1 String The name of the github user who added this node NamedThing contributor_orcid 0..1 Uriorcurie The ORCiD of the person who added this node NamedThing contribution_date 0..1 Date The date on which the node was added NamedThing","title":"Slots"},{"location":"SoftwareOrTool/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"SoftwareOrTool/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"SoftwareOrTool/#mappings","text":"Mapping Type Mapped Value self https://w3id.org/bridge2ai/standards-schema-all/:SoftwareOrTool native https://w3id.org/bridge2ai/standards-schema-all/:SoftwareOrTool","title":"Mappings"},{"location":"SoftwareOrTool/#linkml-source","text":"","title":"LinkML Source"},{"location":"SoftwareOrTool/#direct","text":"name: SoftwareOrTool description: Represents a piece of software or computational tool in the Bridge2AI Standards Registry. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: DataStandardOrTool","title":"Direct"},{"location":"SoftwareOrTool/#induced","text":"name: SoftwareOrTool description: Represents a piece of software or computational tool in the Bridge2AI Standards Registry. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: DataStandardOrTool attributes: collection: name: collection description: Tags for specific sets of standards. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing multivalued: true alias: collection owner: SoftwareOrTool domain_of: - DataStandardOrTool range: StandardsCollectionTag concerns_data_topic: name: concerns_data_topic description: Subject standard is generally applied in the context of object data topic. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: related_to domain: DataStandardOrTool multivalued: true inherited: true alias: concerns_data_topic owner: SoftwareOrTool domain_of: - DataStandardOrTool range: DataTopic has_relevant_organization: name: has_relevant_organization description: Subject standard is managed or otherwise guided buy the object organization(s). from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: related_to domain: DataStandardOrTool multivalued: true inherited: true alias: has_relevant_organization owner: SoftwareOrTool domain_of: - DataStandardOrTool range: Organization purpose_detail: name: purpose_detail description: Text description of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: purpose_detail owner: SoftwareOrTool domain_of: - DataStandardOrTool range: string is_open: name: is_open description: Is the standard or tool FAIR and available free of cost? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: is_open owner: SoftwareOrTool domain_of: - DataStandardOrTool range: boolean requires_registration: name: requires_registration description: Does usage of the standard or tool require registrion of a user or group with some organization or managerial body? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: requires_registration owner: SoftwareOrTool domain_of: - DataStandardOrTool range: boolean url: name: url description: URL for basic documentation of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: url owner: SoftwareOrTool domain_of: - DataStandardOrTool - Organization range: uriorcurie publication: name: publication description: Relevant publication for the standard or tool. Prefer a DOI or PUBMED. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: publication owner: SoftwareOrTool domain_of: - DataStandardOrTool range: uriorcurie formal_specification: name: formal_specification description: Relevant code repository or other location for a formal specification of the standard or tool. Often a URL, particularly to a Git repository. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: formal_specification owner: SoftwareOrTool domain_of: - DataStandardOrTool range: uriorcurie not_relevant_to_dgps: name: not_relevant_to_dgps description: Is the standard or tool currently relevant to DGPs? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: not_relevant_to_dgps owner: SoftwareOrTool domain_of: - DataStandardOrTool range: boolean id: name: id description: A unique identifier for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:identifier identifier: true alias: id owner: SoftwareOrTool domain_of: - NamedThing range: uriorcurie required: true category: name: category description: Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\". from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: type domain: NamedThing designates_type: true alias: category owner: SoftwareOrTool domain_of: - NamedThing range: category_type name: name: name description: A human-readable name for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:name alias: name owner: SoftwareOrTool domain_of: - NamedThing range: string description: name: description description: A human-readable description for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:description alias: description owner: SoftwareOrTool domain_of: - NamedThing range: string subclass_of: name: subclass_of description: Holds between two classes where the domain class is a specialization of the range class. from_schema: https://w3id.org/bridge2ai/standards-schema-all exact_mappings: - rdfs:subClassOf - MESH:isa narrow_mappings: - rdfs:subPropertyOf rank: 1000 is_a: related_to domain: NamedThing multivalued: true inherited: true alias: subclass_of owner: SoftwareOrTool domain_of: - NamedThing range: NamedThing related_to: name: related_to description: A relationship that is asserted between two named things. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 domain: NamedThing multivalued: true inherited: true alias: related_to owner: SoftwareOrTool domain_of: - NamedThing - Organization symmetric: true range: NamedThing contributor_name: name: contributor_name description: The name of the person who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_name owner: SoftwareOrTool domain_of: - NamedThing range: string contributor_github_name: name: contributor_github_name description: The name of the github user who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_github_name owner: SoftwareOrTool domain_of: - NamedThing range: string contributor_orcid: name: contributor_orcid description: The ORCiD of the person who added this node. examples: - value: ORCID:0000-0001-1234-5678 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_orcid owner: SoftwareOrTool domain_of: - NamedThing range: uriorcurie contribution_date: name: contribution_date description: The date on which the node was added. examples: - value: '2023-03-20' from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contribution_date owner: SoftwareOrTool domain_of: - NamedThing range: date","title":"Induced"},{"location":"StandardsCollectionTag/","text":"Enum: StandardsCollectionTag Tags for specific sets of standards. URI: StandardsCollectionTag Permissible Values Value Meaning Description audiovisual None Audiovisual Standard deprecated None Deprecated fileformat None File Format toolkit None Bioinformatics Toolkit clinicaldata None Clinical Data multimodal None Multimodal Data Integration text None Text Data cloudplatform None Cloud Research Platform cloudservice None Cloud Service codesystem None Code System datamodel None Data Model dataregistry None Data Registry softwareregistry None Software Registry datavisualization None Data Visualization notebookplatform None Notebook Platform datasheets None Datasheets machinelearningframework None Machine Learning Framework workflowlanguage None Workflow Language diagnosticinstrument None Diagnostic Instrument drugdata None Drug Data eyedata None Eye Data markuplanguage None Markup Language graphdataplatform None Graph Data Platform guidelines None Guidelines minimuminformationschema None Minimum Information Schema modelcards None Model Cards obofoundry None OBO Foundry ontologyregistry None Ontology Registry policy None Policy proteindata None Protein Data referencegenome None Reference Genome scrnaseqanalysis None scRNA-seq Analysis speechdata None Speech Data standardsregistry None Standards Registry Slots Name Description collection Tags for specific sets of standards Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all LinkML Source name: StandardsCollectionTag description: Tags for specific sets of standards. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 permissible_values: audiovisual: text: audiovisual description: Audiovisual Standard deprecated: text: deprecated description: Deprecated fileformat: text: fileformat description: File Format toolkit: text: toolkit description: Bioinformatics Toolkit clinicaldata: text: clinicaldata description: Clinical Data multimodal: text: multimodal description: Multimodal Data Integration text: text: text description: Text Data cloudplatform: text: cloudplatform description: Cloud Research Platform cloudservice: text: cloudservice description: Cloud Service codesystem: text: codesystem description: Code System datamodel: text: datamodel description: Data Model dataregistry: text: dataregistry description: Data Registry softwareregistry: text: softwareregistry description: Software Registry datavisualization: text: datavisualization description: Data Visualization notebookplatform: text: notebookplatform description: Notebook Platform datasheets: text: datasheets description: Datasheets machinelearningframework: text: machinelearningframework description: Machine Learning Framework workflowlanguage: text: workflowlanguage description: Workflow Language diagnosticinstrument: text: diagnosticinstrument description: Diagnostic Instrument drugdata: text: drugdata description: Drug Data eyedata: text: eyedata description: Eye Data markuplanguage: text: markuplanguage description: Markup Language graphdataplatform: text: graphdataplatform description: Graph Data Platform guidelines: text: guidelines description: Guidelines minimuminformationschema: text: minimuminformationschema description: Minimum Information Schema modelcards: text: modelcards description: Model Cards obofoundry: text: obofoundry description: OBO Foundry ontologyregistry: text: ontologyregistry description: Ontology Registry policy: text: policy description: Policy proteindata: text: proteindata description: Protein Data referencegenome: text: referencegenome description: Reference Genome scrnaseqanalysis: text: scrnaseqanalysis description: scRNA-seq Analysis speechdata: text: speechdata description: Speech Data standardsregistry: text: standardsregistry description: Standards Registry","title":"Enum: StandardsCollectionTag"},{"location":"StandardsCollectionTag/#enum-standardscollectiontag","text":"Tags for specific sets of standards. URI: StandardsCollectionTag","title":"Enum: StandardsCollectionTag"},{"location":"StandardsCollectionTag/#permissible-values","text":"Value Meaning Description audiovisual None Audiovisual Standard deprecated None Deprecated fileformat None File Format toolkit None Bioinformatics Toolkit clinicaldata None Clinical Data multimodal None Multimodal Data Integration text None Text Data cloudplatform None Cloud Research Platform cloudservice None Cloud Service codesystem None Code System datamodel None Data Model dataregistry None Data Registry softwareregistry None Software Registry datavisualization None Data Visualization notebookplatform None Notebook Platform datasheets None Datasheets machinelearningframework None Machine Learning Framework workflowlanguage None Workflow Language diagnosticinstrument None Diagnostic Instrument drugdata None Drug Data eyedata None Eye Data markuplanguage None Markup Language graphdataplatform None Graph Data Platform guidelines None Guidelines minimuminformationschema None Minimum Information Schema modelcards None Model Cards obofoundry None OBO Foundry ontologyregistry None Ontology Registry policy None Policy proteindata None Protein Data referencegenome None Reference Genome scrnaseqanalysis None scRNA-seq Analysis speechdata None Speech Data standardsregistry None Standards Registry","title":"Permissible Values"},{"location":"StandardsCollectionTag/#slots","text":"Name Description collection Tags for specific sets of standards","title":"Slots"},{"location":"StandardsCollectionTag/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"StandardsCollectionTag/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"StandardsCollectionTag/#linkml-source","text":"name: StandardsCollectionTag description: Tags for specific sets of standards. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 permissible_values: audiovisual: text: audiovisual description: Audiovisual Standard deprecated: text: deprecated description: Deprecated fileformat: text: fileformat description: File Format toolkit: text: toolkit description: Bioinformatics Toolkit clinicaldata: text: clinicaldata description: Clinical Data multimodal: text: multimodal description: Multimodal Data Integration text: text: text description: Text Data cloudplatform: text: cloudplatform description: Cloud Research Platform cloudservice: text: cloudservice description: Cloud Service codesystem: text: codesystem description: Code System datamodel: text: datamodel description: Data Model dataregistry: text: dataregistry description: Data Registry softwareregistry: text: softwareregistry description: Software Registry datavisualization: text: datavisualization description: Data Visualization notebookplatform: text: notebookplatform description: Notebook Platform datasheets: text: datasheets description: Datasheets machinelearningframework: text: machinelearningframework description: Machine Learning Framework workflowlanguage: text: workflowlanguage description: Workflow Language diagnosticinstrument: text: diagnosticinstrument description: Diagnostic Instrument drugdata: text: drugdata description: Drug Data eyedata: text: eyedata description: Eye Data markuplanguage: text: markuplanguage description: Markup Language graphdataplatform: text: graphdataplatform description: Graph Data Platform guidelines: text: guidelines description: Guidelines minimuminformationschema: text: minimuminformationschema description: Minimum Information Schema modelcards: text: modelcards description: Model Cards obofoundry: text: obofoundry description: OBO Foundry ontologyregistry: text: ontologyregistry description: Ontology Registry policy: text: policy description: Policy proteindata: text: proteindata description: Protein Data referencegenome: text: referencegenome description: Reference Genome scrnaseqanalysis: text: scrnaseqanalysis description: scRNA-seq Analysis speechdata: text: speechdata description: Speech Data standardsregistry: text: standardsregistry description: Standards Registry","title":"LinkML Source"},{"location":"String/","text":"Type: String A character string URI: xsd:string base : str uri : xsd:string Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Type: String"},{"location":"String/#type-string","text":"A character string URI: xsd:string base : str uri : xsd:string","title":"Type: String"},{"location":"String/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"String/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"Time/","text":"Type: Time A time object represents a (local) time of day, independent of any particular day URI: xsd:dateTime base : XSDTime uri : xsd:dateTime repr : str Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Type: Time"},{"location":"Time/#type-time","text":"A time object represents a (local) time of day, independent of any particular day URI: xsd:dateTime base : XSDTime uri : xsd:dateTime repr : str","title":"Type: Time"},{"location":"Time/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Time/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"TrainingProgram/","text":"Class: TrainingProgram Represents a training program for skills and experience related to standards or tools in the Bridge2AI Standards Registry. URI: https://w3id.org/bridge2ai/standards-schema-all/:TrainingProgram classDiagram class TrainingProgram DataStandardOrTool <|-- TrainingProgram TrainingProgram : category TrainingProgram : collection TrainingProgram ..> StandardsCollectionTag : collection TrainingProgram : concerns_data_topic TrainingProgram ..> DataTopic : concerns_data_topic TrainingProgram : contribution_date TrainingProgram : contributor_github_name TrainingProgram : contributor_name TrainingProgram : contributor_orcid TrainingProgram : description TrainingProgram : formal_specification TrainingProgram : has_relevant_organization TrainingProgram ..> Organization : has_relevant_organization TrainingProgram : id TrainingProgram : is_open TrainingProgram : name TrainingProgram : not_relevant_to_dgps TrainingProgram : publication TrainingProgram : purpose_detail TrainingProgram : related_to TrainingProgram ..> NamedThing : related_to TrainingProgram : requires_registration TrainingProgram : subclass_of TrainingProgram ..> NamedThing : subclass_of TrainingProgram : url Inheritance NamedThing DataStandardOrTool TrainingProgram Slots Name Cardinality and Range Description Inheritance collection 0..* StandardsCollectionTag Tags for specific sets of standards DataStandardOrTool concerns_data_topic 0..* DataTopic Subject standard is generally applied in the context of object data topic DataStandardOrTool has_relevant_organization 0..* Organization Subject standard is managed or otherwise guided buy the object organization(s... DataStandardOrTool purpose_detail 0..1 String Text description of the standard or tool DataStandardOrTool is_open 0..1 Boolean Is the standard or tool FAIR and available free of cost? DataStandardOrTool requires_registration 0..1 Boolean Does usage of the standard or tool require registrion of a user or group with... DataStandardOrTool url 0..1 Uriorcurie URL for basic documentation of the standard or tool DataStandardOrTool publication 0..1 Uriorcurie Relevant publication for the standard or tool DataStandardOrTool formal_specification 0..1 Uriorcurie Relevant code repository or other location for a formal specification of the ... DataStandardOrTool not_relevant_to_dgps 0..1 Boolean Is the standard or tool currently relevant to DGPs? DataStandardOrTool id 1..1 Uriorcurie A unique identifier for a thing NamedThing category 0..1 CategoryType Name of the high level ontology class in which this entity is categorized NamedThing name 0..1 String A human-readable name for a thing NamedThing description 0..1 String A human-readable description for a thing NamedThing subclass_of 0..* NamedThing Holds between two classes where the domain class is a specialization of the r... NamedThing related_to 0..* NamedThing A relationship that is asserted between two named things NamedThing contributor_name 0..1 String The name of the person who added this node NamedThing contributor_github_name 0..1 String The name of the github user who added this node NamedThing contributor_orcid 0..1 Uriorcurie The ORCiD of the person who added this node NamedThing contribution_date 0..1 Date The date on which the node was added NamedThing Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all Mappings Mapping Type Mapped Value self https://w3id.org/bridge2ai/standards-schema-all/:TrainingProgram native https://w3id.org/bridge2ai/standards-schema-all/:TrainingProgram LinkML Source Direct name: TrainingProgram description: Represents a training program for skills and experience related to standards or tools in the Bridge2AI Standards Registry. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: DataStandardOrTool Induced name: TrainingProgram description: Represents a training program for skills and experience related to standards or tools in the Bridge2AI Standards Registry. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: DataStandardOrTool attributes: collection: name: collection description: Tags for specific sets of standards. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing multivalued: true alias: collection owner: TrainingProgram domain_of: - DataStandardOrTool range: StandardsCollectionTag concerns_data_topic: name: concerns_data_topic description: Subject standard is generally applied in the context of object data topic. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: related_to domain: DataStandardOrTool multivalued: true inherited: true alias: concerns_data_topic owner: TrainingProgram domain_of: - DataStandardOrTool range: DataTopic has_relevant_organization: name: has_relevant_organization description: Subject standard is managed or otherwise guided buy the object organization(s). from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: related_to domain: DataStandardOrTool multivalued: true inherited: true alias: has_relevant_organization owner: TrainingProgram domain_of: - DataStandardOrTool range: Organization purpose_detail: name: purpose_detail description: Text description of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: purpose_detail owner: TrainingProgram domain_of: - DataStandardOrTool range: string is_open: name: is_open description: Is the standard or tool FAIR and available free of cost? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: is_open owner: TrainingProgram domain_of: - DataStandardOrTool range: boolean requires_registration: name: requires_registration description: Does usage of the standard or tool require registrion of a user or group with some organization or managerial body? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: requires_registration owner: TrainingProgram domain_of: - DataStandardOrTool range: boolean url: name: url description: URL for basic documentation of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: url owner: TrainingProgram domain_of: - DataStandardOrTool - Organization range: uriorcurie publication: name: publication description: Relevant publication for the standard or tool. Prefer a DOI or PUBMED. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: publication owner: TrainingProgram domain_of: - DataStandardOrTool range: uriorcurie formal_specification: name: formal_specification description: Relevant code repository or other location for a formal specification of the standard or tool. Often a URL, particularly to a Git repository. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: formal_specification owner: TrainingProgram domain_of: - DataStandardOrTool range: uriorcurie not_relevant_to_dgps: name: not_relevant_to_dgps description: Is the standard or tool currently relevant to DGPs? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: not_relevant_to_dgps owner: TrainingProgram domain_of: - DataStandardOrTool range: boolean id: name: id description: A unique identifier for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:identifier identifier: true alias: id owner: TrainingProgram domain_of: - NamedThing range: uriorcurie required: true category: name: category description: Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\". from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: type domain: NamedThing designates_type: true alias: category owner: TrainingProgram domain_of: - NamedThing range: category_type name: name: name description: A human-readable name for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:name alias: name owner: TrainingProgram domain_of: - NamedThing range: string description: name: description description: A human-readable description for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:description alias: description owner: TrainingProgram domain_of: - NamedThing range: string subclass_of: name: subclass_of description: Holds between two classes where the domain class is a specialization of the range class. from_schema: https://w3id.org/bridge2ai/standards-schema-all exact_mappings: - rdfs:subClassOf - MESH:isa narrow_mappings: - rdfs:subPropertyOf rank: 1000 is_a: related_to domain: NamedThing multivalued: true inherited: true alias: subclass_of owner: TrainingProgram domain_of: - NamedThing range: NamedThing related_to: name: related_to description: A relationship that is asserted between two named things. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 domain: NamedThing multivalued: true inherited: true alias: related_to owner: TrainingProgram domain_of: - NamedThing - Organization symmetric: true range: NamedThing contributor_name: name: contributor_name description: The name of the person who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_name owner: TrainingProgram domain_of: - NamedThing range: string contributor_github_name: name: contributor_github_name description: The name of the github user who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_github_name owner: TrainingProgram domain_of: - NamedThing range: string contributor_orcid: name: contributor_orcid description: The ORCiD of the person who added this node. examples: - value: ORCID:0000-0001-1234-5678 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_orcid owner: TrainingProgram domain_of: - NamedThing range: uriorcurie contribution_date: name: contribution_date description: The date on which the node was added. examples: - value: '2023-03-20' from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contribution_date owner: TrainingProgram domain_of: - NamedThing range: date","title":"Class: TrainingProgram"},{"location":"TrainingProgram/#class-trainingprogram","text":"Represents a training program for skills and experience related to standards or tools in the Bridge2AI Standards Registry. URI: https://w3id.org/bridge2ai/standards-schema-all/:TrainingProgram classDiagram class TrainingProgram DataStandardOrTool <|-- TrainingProgram TrainingProgram : category TrainingProgram : collection TrainingProgram ..> StandardsCollectionTag : collection TrainingProgram : concerns_data_topic TrainingProgram ..> DataTopic : concerns_data_topic TrainingProgram : contribution_date TrainingProgram : contributor_github_name TrainingProgram : contributor_name TrainingProgram : contributor_orcid TrainingProgram : description TrainingProgram : formal_specification TrainingProgram : has_relevant_organization TrainingProgram ..> Organization : has_relevant_organization TrainingProgram : id TrainingProgram : is_open TrainingProgram : name TrainingProgram : not_relevant_to_dgps TrainingProgram : publication TrainingProgram : purpose_detail TrainingProgram : related_to TrainingProgram ..> NamedThing : related_to TrainingProgram : requires_registration TrainingProgram : subclass_of TrainingProgram ..> NamedThing : subclass_of TrainingProgram : url","title":"Class: TrainingProgram"},{"location":"TrainingProgram/#inheritance","text":"NamedThing DataStandardOrTool TrainingProgram","title":"Inheritance"},{"location":"TrainingProgram/#slots","text":"Name Cardinality and Range Description Inheritance collection 0..* StandardsCollectionTag Tags for specific sets of standards DataStandardOrTool concerns_data_topic 0..* DataTopic Subject standard is generally applied in the context of object data topic DataStandardOrTool has_relevant_organization 0..* Organization Subject standard is managed or otherwise guided buy the object organization(s... DataStandardOrTool purpose_detail 0..1 String Text description of the standard or tool DataStandardOrTool is_open 0..1 Boolean Is the standard or tool FAIR and available free of cost? DataStandardOrTool requires_registration 0..1 Boolean Does usage of the standard or tool require registrion of a user or group with... DataStandardOrTool url 0..1 Uriorcurie URL for basic documentation of the standard or tool DataStandardOrTool publication 0..1 Uriorcurie Relevant publication for the standard or tool DataStandardOrTool formal_specification 0..1 Uriorcurie Relevant code repository or other location for a formal specification of the ... DataStandardOrTool not_relevant_to_dgps 0..1 Boolean Is the standard or tool currently relevant to DGPs? DataStandardOrTool id 1..1 Uriorcurie A unique identifier for a thing NamedThing category 0..1 CategoryType Name of the high level ontology class in which this entity is categorized NamedThing name 0..1 String A human-readable name for a thing NamedThing description 0..1 String A human-readable description for a thing NamedThing subclass_of 0..* NamedThing Holds between two classes where the domain class is a specialization of the r... NamedThing related_to 0..* NamedThing A relationship that is asserted between two named things NamedThing contributor_name 0..1 String The name of the person who added this node NamedThing contributor_github_name 0..1 String The name of the github user who added this node NamedThing contributor_orcid 0..1 Uriorcurie The ORCiD of the person who added this node NamedThing contribution_date 0..1 Date The date on which the node was added NamedThing","title":"Slots"},{"location":"TrainingProgram/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"TrainingProgram/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"TrainingProgram/#mappings","text":"Mapping Type Mapped Value self https://w3id.org/bridge2ai/standards-schema-all/:TrainingProgram native https://w3id.org/bridge2ai/standards-schema-all/:TrainingProgram","title":"Mappings"},{"location":"TrainingProgram/#linkml-source","text":"","title":"LinkML Source"},{"location":"TrainingProgram/#direct","text":"name: TrainingProgram description: Represents a training program for skills and experience related to standards or tools in the Bridge2AI Standards Registry. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: DataStandardOrTool","title":"Direct"},{"location":"TrainingProgram/#induced","text":"name: TrainingProgram description: Represents a training program for skills and experience related to standards or tools in the Bridge2AI Standards Registry. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: DataStandardOrTool attributes: collection: name: collection description: Tags for specific sets of standards. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing multivalued: true alias: collection owner: TrainingProgram domain_of: - DataStandardOrTool range: StandardsCollectionTag concerns_data_topic: name: concerns_data_topic description: Subject standard is generally applied in the context of object data topic. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: related_to domain: DataStandardOrTool multivalued: true inherited: true alias: concerns_data_topic owner: TrainingProgram domain_of: - DataStandardOrTool range: DataTopic has_relevant_organization: name: has_relevant_organization description: Subject standard is managed or otherwise guided buy the object organization(s). from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: related_to domain: DataStandardOrTool multivalued: true inherited: true alias: has_relevant_organization owner: TrainingProgram domain_of: - DataStandardOrTool range: Organization purpose_detail: name: purpose_detail description: Text description of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: purpose_detail owner: TrainingProgram domain_of: - DataStandardOrTool range: string is_open: name: is_open description: Is the standard or tool FAIR and available free of cost? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: is_open owner: TrainingProgram domain_of: - DataStandardOrTool range: boolean requires_registration: name: requires_registration description: Does usage of the standard or tool require registrion of a user or group with some organization or managerial body? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: requires_registration owner: TrainingProgram domain_of: - DataStandardOrTool range: boolean url: name: url description: URL for basic documentation of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: url owner: TrainingProgram domain_of: - DataStandardOrTool - Organization range: uriorcurie publication: name: publication description: Relevant publication for the standard or tool. Prefer a DOI or PUBMED. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: publication owner: TrainingProgram domain_of: - DataStandardOrTool range: uriorcurie formal_specification: name: formal_specification description: Relevant code repository or other location for a formal specification of the standard or tool. Often a URL, particularly to a Git repository. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: formal_specification owner: TrainingProgram domain_of: - DataStandardOrTool range: uriorcurie not_relevant_to_dgps: name: not_relevant_to_dgps description: Is the standard or tool currently relevant to DGPs? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: not_relevant_to_dgps owner: TrainingProgram domain_of: - DataStandardOrTool range: boolean id: name: id description: A unique identifier for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:identifier identifier: true alias: id owner: TrainingProgram domain_of: - NamedThing range: uriorcurie required: true category: name: category description: Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\". from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: type domain: NamedThing designates_type: true alias: category owner: TrainingProgram domain_of: - NamedThing range: category_type name: name: name description: A human-readable name for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:name alias: name owner: TrainingProgram domain_of: - NamedThing range: string description: name: description description: A human-readable description for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:description alias: description owner: TrainingProgram domain_of: - NamedThing range: string subclass_of: name: subclass_of description: Holds between two classes where the domain class is a specialization of the range class. from_schema: https://w3id.org/bridge2ai/standards-schema-all exact_mappings: - rdfs:subClassOf - MESH:isa narrow_mappings: - rdfs:subPropertyOf rank: 1000 is_a: related_to domain: NamedThing multivalued: true inherited: true alias: subclass_of owner: TrainingProgram domain_of: - NamedThing range: NamedThing related_to: name: related_to description: A relationship that is asserted between two named things. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 domain: NamedThing multivalued: true inherited: true alias: related_to owner: TrainingProgram domain_of: - NamedThing - Organization symmetric: true range: NamedThing contributor_name: name: contributor_name description: The name of the person who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_name owner: TrainingProgram domain_of: - NamedThing range: string contributor_github_name: name: contributor_github_name description: The name of the github user who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_github_name owner: TrainingProgram domain_of: - NamedThing range: string contributor_orcid: name: contributor_orcid description: The ORCiD of the person who added this node. examples: - value: ORCID:0000-0001-1234-5678 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_orcid owner: TrainingProgram domain_of: - NamedThing range: uriorcurie contribution_date: name: contribution_date description: The date on which the node was added. examples: - value: '2023-03-20' from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contribution_date owner: TrainingProgram domain_of: - NamedThing range: date","title":"Induced"},{"location":"URL/","text":"Slot: URL URI: STANDARDSORGANIZATION:URL Applicable Classes Name Description Organization Represents a group or organization related to or responsible for one or more ... Properties Range: xsd:string Examples Value https://www.zeiss.com/ Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-organization-schema LinkML Source name: URL examples: - value: https://www.zeiss.com/ from_schema: https://w3id.org/bridge2ai/standards-organization-schema rank: 1000 alias: URL domain_of: - Organization range: string","title":"Slot: URL"},{"location":"URL/#slot-url","text":"URI: STANDARDSORGANIZATION:URL","title":"Slot: URL"},{"location":"URL/#applicable-classes","text":"Name Description Organization Represents a group or organization related to or responsible for one or more ...","title":"Applicable Classes"},{"location":"URL/#properties","text":"Range: xsd:string","title":"Properties"},{"location":"URL/#examples","text":"Value https://www.zeiss.com/","title":"Examples"},{"location":"URL/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"URL/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-organization-schema","title":"Schema Source"},{"location":"URL/#linkml-source","text":"name: URL examples: - value: https://www.zeiss.com/ from_schema: https://w3id.org/bridge2ai/standards-organization-schema rank: 1000 alias: URL domain_of: - Organization range: string","title":"LinkML Source"},{"location":"Uri/","text":"Type: Uri a complete URI URI: xsd:anyURI base : URI uri : xsd:anyURI repr : str Comments in RDF serializations a slot with range of uri is treated as a literal or type xsd:anyURI unless it is an identifier or a reference to an identifier, in which case it is translated directly to a node Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Type: Uri"},{"location":"Uri/#type-uri","text":"a complete URI URI: xsd:anyURI base : URI uri : xsd:anyURI repr : str","title":"Type: Uri"},{"location":"Uri/#comments","text":"in RDF serializations a slot with range of uri is treated as a literal or type xsd:anyURI unless it is an identifier or a reference to an identifier, in which case it is translated directly to a node","title":"Comments"},{"location":"Uri/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Uri/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"Uriorcurie/","text":"Type: Uriorcurie a URI or a CURIE URI: xsd:anyURI base : URIorCURIE uri : xsd:anyURI repr : str Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Type: Uriorcurie"},{"location":"Uriorcurie/#type-uriorcurie","text":"a URI or a CURIE URI: xsd:anyURI base : URIorCURIE uri : xsd:anyURI repr : str","title":"Type: Uriorcurie"},{"location":"Uriorcurie/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Uriorcurie/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"UseCase/","text":"Class: UseCase Represents a use case for Bridge2AI standards. URI: https://w3id.org/bridge2ai/standards-schema-all/:UseCase classDiagram class UseCase NamedThing <|-- UseCase UseCase : alternative_standards_and_tools UseCase ..> DataStandardOrTool : alternative_standards_and_tools UseCase : category UseCase : contribution_date UseCase : contributor_github_name UseCase : contributor_name UseCase : contributor_orcid UseCase : data_substrates UseCase ..> DataSubstrate : data_substrates UseCase : data_topics UseCase ..> DataTopic : data_topics UseCase : description UseCase : enables UseCase ..> UseCase : enables UseCase : id UseCase : involved_in_experimental_design UseCase : involved_in_metadata_management UseCase : involved_in_quality_control UseCase : known_limitations UseCase : name UseCase : related_to UseCase ..> NamedThing : related_to UseCase : relevance_to_dgps UseCase ..> DataGeneratingProject : relevance_to_dgps UseCase : standards_and_tools_for_dgp_use UseCase ..> DataStandardOrTool : standards_and_tools_for_dgp_use UseCase : subclass_of UseCase ..> NamedThing : subclass_of UseCase : use_case_category UseCase ..> UseCaseCategory : use_case_category UseCase : xref Inheritance NamedThing UseCase Slots Name Cardinality and Range Description Inheritance use_case_category 0..1 UseCaseCategory Category of the UseCase direct known_limitations 0..1 String Any current obstacles to implementing this use case direct relevance_to_dgps 0..* DataGeneratingProject Relevance of the use case to one or more DGPs direct data_topics 0..* DataTopic Relevance of the use case to one or more data topics direct data_substrates 0..* DataSubstrate Relevance of the use case to one or more data substrates direct standards_and_tools_for_dgp_use 0..* DataStandardOrTool List of identifiers of standards and tools; those planned to be used, or alre... direct alternative_standards_and_tools 0..* DataStandardOrTool List of identifiers of standards and tools; those not explicitly planned to b... direct enables 0..* UseCase Other use case(s) this use case supports or makes possible direct involved_in_experimental_design 0..1 Boolean True if use case is likely to be implemented as part of an experimental proce... direct involved_in_metadata_management 0..1 Boolean True if use case is likely to be implemented as part of metadata indexing, sa... direct involved_in_quality_control 0..1 Boolean True is use case is likely to be implemented as part of data validation opera... direct xref 0..* Uriorcurie URI of corresponding class in an ontology of experimental procedures, in CURI... direct id 1..1 Uriorcurie A unique identifier for a thing NamedThing category 0..1 CategoryType Name of the high level ontology class in which this entity is categorized NamedThing name 0..1 String A human-readable name for a thing NamedThing description 0..1 String A human-readable description for a thing NamedThing subclass_of 0..* NamedThing Holds between two classes where the domain class is a specialization of the r... NamedThing related_to 0..* NamedThing A relationship that is asserted between two named things NamedThing contributor_name 0..1 String The name of the person who added this node NamedThing contributor_github_name 0..1 String The name of the github user who added this node NamedThing contributor_orcid 0..1 Uriorcurie The ORCiD of the person who added this node NamedThing contribution_date 0..1 Date The date on which the node was added NamedThing Usages used by used in type used UseCase enables range UseCase UseCaseContainer use_cases range UseCase Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all Mappings Mapping Type Mapped Value self https://w3id.org/bridge2ai/standards-schema-all/:UseCase native https://w3id.org/bridge2ai/standards-schema-all/:UseCase LinkML Source Direct name: UseCase description: Represents a use case for Bridge2AI standards. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: NamedThing slots: - use_case_category - known_limitations - relevance_to_dgps - data_topics - data_substrates - standards_and_tools_for_dgp_use - alternative_standards_and_tools - enables - involved_in_experimental_design - involved_in_metadata_management - involved_in_quality_control - xref slot_usage: use_case_category: name: use_case_category domain_of: - UseCase required: true Induced name: UseCase description: Represents a use case for Bridge2AI standards. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: NamedThing slot_usage: use_case_category: name: use_case_category domain_of: - UseCase required: true attributes: use_case_category: name: use_case_category description: Category of the UseCase. Not all projects will incorporate use cases in all categories. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: use_case_category owner: UseCase domain_of: - UseCase range: UseCaseCategory required: true known_limitations: name: known_limitations description: Any current obstacles to implementing this use case. This could be a selection from one or more predefined categories including lack of standards, lack of relevant patient cohort, lack of funding, etc. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: known_limitations owner: UseCase domain_of: - UseCase range: string relevance_to_dgps: name: relevance_to_dgps description: Relevance of the use case to one or more DGPs. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 multivalued: true alias: relevance_to_dgps owner: UseCase domain_of: - UseCase range: DataGeneratingProject data_topics: name: data_topics description: Relevance of the use case to one or more data topics. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing multivalued: true alias: data_topics owner: UseCase domain_of: - UseCase range: DataTopic data_substrates: name: data_substrates description: Relevance of the use case to one or more data substrates. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing multivalued: true alias: data_substrates owner: UseCase domain_of: - UseCase range: DataSubstrate standards_and_tools_for_dgp_use: name: standards_and_tools_for_dgp_use description: List of identifiers of standards and tools; those planned to be used, or already in use, by one or more Bridge2AI DGPs in addressing this use case, from those in the Standards Registry, or TBD if standards/tools not yet finalized for this use case. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing multivalued: true alias: standards_and_tools_for_dgp_use owner: UseCase domain_of: - UseCase range: DataStandardOrTool alternative_standards_and_tools: name: alternative_standards_and_tools description: List of identifiers of standards and tools; those not explicitly planned to be used, by one or more Bridge2AI DGPs in addressing this use case but serving as viable alternatives, from those in the Standards Registry. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing multivalued: true alias: alternative_standards_and_tools owner: UseCase domain_of: - UseCase range: DataStandardOrTool enables: name: enables description: Other use case(s) this use case supports or makes possible. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing multivalued: true alias: enables owner: UseCase domain_of: - UseCase range: UseCase involved_in_experimental_design: name: involved_in_experimental_design description: True if use case is likely to be implemented as part of an experimental procedure or collection of data to be used as part of an experiment. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: involved_in_experimental_design owner: UseCase domain_of: - UseCase range: boolean involved_in_metadata_management: name: involved_in_metadata_management description: True if use case is likely to be implemented as part of metadata indexing, sample tracking, or any other storage of high-level data properties. Includes use cases in which metadata will be collected along with data. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: involved_in_metadata_management owner: UseCase domain_of: - UseCase range: boolean involved_in_quality_control: name: involved_in_quality_control description: True is use case is likely to be implemented as part of data validation operations. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: involved_in_quality_control owner: UseCase domain_of: - UseCase range: boolean xref: name: xref description: URI of corresponding class in an ontology of experimental procedures, in CURIE form. from_schema: https://w3id.org/bridge2ai/standards-schema-all aliases: - dbxref - Dbxref - DbXref rank: 1000 is_a: node_property domain: NamedThing multivalued: true alias: xref owner: UseCase domain_of: - UseCase range: uriorcurie id: name: id description: A unique identifier for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:identifier identifier: true alias: id owner: UseCase domain_of: - NamedThing range: uriorcurie required: true category: name: category description: Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\". from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: type domain: NamedThing designates_type: true alias: category owner: UseCase domain_of: - NamedThing range: category_type name: name: name description: A human-readable name for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:name alias: name owner: UseCase domain_of: - NamedThing range: string description: name: description description: A human-readable description for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:description alias: description owner: UseCase domain_of: - NamedThing range: string subclass_of: name: subclass_of description: Holds between two classes where the domain class is a specialization of the range class. from_schema: https://w3id.org/bridge2ai/standards-schema-all exact_mappings: - rdfs:subClassOf - MESH:isa narrow_mappings: - rdfs:subPropertyOf rank: 1000 is_a: related_to domain: NamedThing multivalued: true inherited: true alias: subclass_of owner: UseCase domain_of: - NamedThing range: NamedThing related_to: name: related_to description: A relationship that is asserted between two named things. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 domain: NamedThing multivalued: true inherited: true alias: related_to owner: UseCase domain_of: - NamedThing - Organization symmetric: true range: NamedThing contributor_name: name: contributor_name description: The name of the person who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_name owner: UseCase domain_of: - NamedThing range: string contributor_github_name: name: contributor_github_name description: The name of the github user who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_github_name owner: UseCase domain_of: - NamedThing range: string contributor_orcid: name: contributor_orcid description: The ORCiD of the person who added this node. examples: - value: ORCID:0000-0001-1234-5678 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_orcid owner: UseCase domain_of: - NamedThing range: uriorcurie contribution_date: name: contribution_date description: The date on which the node was added. examples: - value: '2023-03-20' from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contribution_date owner: UseCase domain_of: - NamedThing range: date","title":"Class: UseCase"},{"location":"UseCase/#class-usecase","text":"Represents a use case for Bridge2AI standards. URI: https://w3id.org/bridge2ai/standards-schema-all/:UseCase classDiagram class UseCase NamedThing <|-- UseCase UseCase : alternative_standards_and_tools UseCase ..> DataStandardOrTool : alternative_standards_and_tools UseCase : category UseCase : contribution_date UseCase : contributor_github_name UseCase : contributor_name UseCase : contributor_orcid UseCase : data_substrates UseCase ..> DataSubstrate : data_substrates UseCase : data_topics UseCase ..> DataTopic : data_topics UseCase : description UseCase : enables UseCase ..> UseCase : enables UseCase : id UseCase : involved_in_experimental_design UseCase : involved_in_metadata_management UseCase : involved_in_quality_control UseCase : known_limitations UseCase : name UseCase : related_to UseCase ..> NamedThing : related_to UseCase : relevance_to_dgps UseCase ..> DataGeneratingProject : relevance_to_dgps UseCase : standards_and_tools_for_dgp_use UseCase ..> DataStandardOrTool : standards_and_tools_for_dgp_use UseCase : subclass_of UseCase ..> NamedThing : subclass_of UseCase : use_case_category UseCase ..> UseCaseCategory : use_case_category UseCase : xref","title":"Class: UseCase"},{"location":"UseCase/#inheritance","text":"NamedThing UseCase","title":"Inheritance"},{"location":"UseCase/#slots","text":"Name Cardinality and Range Description Inheritance use_case_category 0..1 UseCaseCategory Category of the UseCase direct known_limitations 0..1 String Any current obstacles to implementing this use case direct relevance_to_dgps 0..* DataGeneratingProject Relevance of the use case to one or more DGPs direct data_topics 0..* DataTopic Relevance of the use case to one or more data topics direct data_substrates 0..* DataSubstrate Relevance of the use case to one or more data substrates direct standards_and_tools_for_dgp_use 0..* DataStandardOrTool List of identifiers of standards and tools; those planned to be used, or alre... direct alternative_standards_and_tools 0..* DataStandardOrTool List of identifiers of standards and tools; those not explicitly planned to b... direct enables 0..* UseCase Other use case(s) this use case supports or makes possible direct involved_in_experimental_design 0..1 Boolean True if use case is likely to be implemented as part of an experimental proce... direct involved_in_metadata_management 0..1 Boolean True if use case is likely to be implemented as part of metadata indexing, sa... direct involved_in_quality_control 0..1 Boolean True is use case is likely to be implemented as part of data validation opera... direct xref 0..* Uriorcurie URI of corresponding class in an ontology of experimental procedures, in CURI... direct id 1..1 Uriorcurie A unique identifier for a thing NamedThing category 0..1 CategoryType Name of the high level ontology class in which this entity is categorized NamedThing name 0..1 String A human-readable name for a thing NamedThing description 0..1 String A human-readable description for a thing NamedThing subclass_of 0..* NamedThing Holds between two classes where the domain class is a specialization of the r... NamedThing related_to 0..* NamedThing A relationship that is asserted between two named things NamedThing contributor_name 0..1 String The name of the person who added this node NamedThing contributor_github_name 0..1 String The name of the github user who added this node NamedThing contributor_orcid 0..1 Uriorcurie The ORCiD of the person who added this node NamedThing contribution_date 0..1 Date The date on which the node was added NamedThing","title":"Slots"},{"location":"UseCase/#usages","text":"used by used in type used UseCase enables range UseCase UseCaseContainer use_cases range UseCase","title":"Usages"},{"location":"UseCase/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"UseCase/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"UseCase/#mappings","text":"Mapping Type Mapped Value self https://w3id.org/bridge2ai/standards-schema-all/:UseCase native https://w3id.org/bridge2ai/standards-schema-all/:UseCase","title":"Mappings"},{"location":"UseCase/#linkml-source","text":"","title":"LinkML Source"},{"location":"UseCase/#direct","text":"name: UseCase description: Represents a use case for Bridge2AI standards. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: NamedThing slots: - use_case_category - known_limitations - relevance_to_dgps - data_topics - data_substrates - standards_and_tools_for_dgp_use - alternative_standards_and_tools - enables - involved_in_experimental_design - involved_in_metadata_management - involved_in_quality_control - xref slot_usage: use_case_category: name: use_case_category domain_of: - UseCase required: true","title":"Direct"},{"location":"UseCase/#induced","text":"name: UseCase description: Represents a use case for Bridge2AI standards. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: NamedThing slot_usage: use_case_category: name: use_case_category domain_of: - UseCase required: true attributes: use_case_category: name: use_case_category description: Category of the UseCase. Not all projects will incorporate use cases in all categories. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: use_case_category owner: UseCase domain_of: - UseCase range: UseCaseCategory required: true known_limitations: name: known_limitations description: Any current obstacles to implementing this use case. This could be a selection from one or more predefined categories including lack of standards, lack of relevant patient cohort, lack of funding, etc. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: known_limitations owner: UseCase domain_of: - UseCase range: string relevance_to_dgps: name: relevance_to_dgps description: Relevance of the use case to one or more DGPs. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 multivalued: true alias: relevance_to_dgps owner: UseCase domain_of: - UseCase range: DataGeneratingProject data_topics: name: data_topics description: Relevance of the use case to one or more data topics. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing multivalued: true alias: data_topics owner: UseCase domain_of: - UseCase range: DataTopic data_substrates: name: data_substrates description: Relevance of the use case to one or more data substrates. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing multivalued: true alias: data_substrates owner: UseCase domain_of: - UseCase range: DataSubstrate standards_and_tools_for_dgp_use: name: standards_and_tools_for_dgp_use description: List of identifiers of standards and tools; those planned to be used, or already in use, by one or more Bridge2AI DGPs in addressing this use case, from those in the Standards Registry, or TBD if standards/tools not yet finalized for this use case. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing multivalued: true alias: standards_and_tools_for_dgp_use owner: UseCase domain_of: - UseCase range: DataStandardOrTool alternative_standards_and_tools: name: alternative_standards_and_tools description: List of identifiers of standards and tools; those not explicitly planned to be used, by one or more Bridge2AI DGPs in addressing this use case but serving as viable alternatives, from those in the Standards Registry. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing multivalued: true alias: alternative_standards_and_tools owner: UseCase domain_of: - UseCase range: DataStandardOrTool enables: name: enables description: Other use case(s) this use case supports or makes possible. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing multivalued: true alias: enables owner: UseCase domain_of: - UseCase range: UseCase involved_in_experimental_design: name: involved_in_experimental_design description: True if use case is likely to be implemented as part of an experimental procedure or collection of data to be used as part of an experiment. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: involved_in_experimental_design owner: UseCase domain_of: - UseCase range: boolean involved_in_metadata_management: name: involved_in_metadata_management description: True if use case is likely to be implemented as part of metadata indexing, sample tracking, or any other storage of high-level data properties. Includes use cases in which metadata will be collected along with data. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: involved_in_metadata_management owner: UseCase domain_of: - UseCase range: boolean involved_in_quality_control: name: involved_in_quality_control description: True is use case is likely to be implemented as part of data validation operations. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: involved_in_quality_control owner: UseCase domain_of: - UseCase range: boolean xref: name: xref description: URI of corresponding class in an ontology of experimental procedures, in CURIE form. from_schema: https://w3id.org/bridge2ai/standards-schema-all aliases: - dbxref - Dbxref - DbXref rank: 1000 is_a: node_property domain: NamedThing multivalued: true alias: xref owner: UseCase domain_of: - UseCase range: uriorcurie id: name: id description: A unique identifier for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:identifier identifier: true alias: id owner: UseCase domain_of: - NamedThing range: uriorcurie required: true category: name: category description: Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\". from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: type domain: NamedThing designates_type: true alias: category owner: UseCase domain_of: - NamedThing range: category_type name: name: name description: A human-readable name for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:name alias: name owner: UseCase domain_of: - NamedThing range: string description: name: description description: A human-readable description for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:description alias: description owner: UseCase domain_of: - NamedThing range: string subclass_of: name: subclass_of description: Holds between two classes where the domain class is a specialization of the range class. from_schema: https://w3id.org/bridge2ai/standards-schema-all exact_mappings: - rdfs:subClassOf - MESH:isa narrow_mappings: - rdfs:subPropertyOf rank: 1000 is_a: related_to domain: NamedThing multivalued: true inherited: true alias: subclass_of owner: UseCase domain_of: - NamedThing range: NamedThing related_to: name: related_to description: A relationship that is asserted between two named things. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 domain: NamedThing multivalued: true inherited: true alias: related_to owner: UseCase domain_of: - NamedThing - Organization symmetric: true range: NamedThing contributor_name: name: contributor_name description: The name of the person who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_name owner: UseCase domain_of: - NamedThing range: string contributor_github_name: name: contributor_github_name description: The name of the github user who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_github_name owner: UseCase domain_of: - NamedThing range: string contributor_orcid: name: contributor_orcid description: The ORCiD of the person who added this node. examples: - value: ORCID:0000-0001-1234-5678 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_orcid owner: UseCase domain_of: - NamedThing range: uriorcurie contribution_date: name: contribution_date description: The date on which the node was added. examples: - value: '2023-03-20' from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contribution_date owner: UseCase domain_of: - NamedThing range: date","title":"Induced"},{"location":"UseCaseCategory/","text":"Enum: UseCaseCategory Category of use case. URI: UseCaseCategory Permissible Values Value Meaning Description acquisition None Acquisition integration None Integration standardization None Standardization modeling None Modeling application None Application assessment None Assessment Slots Name Description use_case_category Category of the UseCase Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all LinkML Source name: UseCaseCategory description: Category of use case. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 permissible_values: acquisition: text: acquisition description: Acquisition integration: text: integration description: Integration standardization: text: standardization description: Standardization modeling: text: modeling description: Modeling application: text: application description: Application assessment: text: assessment description: Assessment","title":"Enum: UseCaseCategory"},{"location":"UseCaseCategory/#enum-usecasecategory","text":"Category of use case. URI: UseCaseCategory","title":"Enum: UseCaseCategory"},{"location":"UseCaseCategory/#permissible-values","text":"Value Meaning Description acquisition None Acquisition integration None Integration standardization None Standardization modeling None Modeling application None Application assessment None Assessment","title":"Permissible Values"},{"location":"UseCaseCategory/#slots","text":"Name Description use_case_category Category of the UseCase","title":"Slots"},{"location":"UseCaseCategory/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"UseCaseCategory/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"UseCaseCategory/#linkml-source","text":"name: UseCaseCategory description: Category of use case. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 permissible_values: acquisition: text: acquisition description: Acquisition integration: text: integration description: Integration standardization: text: standardization description: Standardization modeling: text: modeling description: Modeling application: text: application description: Application assessment: text: assessment description: Assessment","title":"LinkML Source"},{"location":"UseCaseContainer/","text":"Class: UseCaseContainer A container for UseCase. URI: https://w3id.org/bridge2ai/standards-schema-all/:UseCaseContainer classDiagram class UseCaseContainer UseCaseContainer : use_cases UseCaseContainer ..> UseCase : use_cases Slots Name Cardinality and Range Description Inheritance use_cases 0..* UseCase Collection of associated use cases direct Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all Mappings Mapping Type Mapped Value self https://w3id.org/bridge2ai/standards-schema-all/:UseCaseContainer native https://w3id.org/bridge2ai/standards-schema-all/:UseCaseContainer LinkML Source Direct name: UseCaseContainer description: A container for UseCase. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slots: - use_cases Induced name: UseCaseContainer description: A container for UseCase. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 attributes: use_cases: name: use_cases description: Collection of associated use cases from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 multivalued: true alias: use_cases owner: UseCaseContainer domain_of: - UseCaseContainer range: UseCase inlined: true inlined_as_list: true","title":"Class: UseCaseContainer"},{"location":"UseCaseContainer/#class-usecasecontainer","text":"A container for UseCase. URI: https://w3id.org/bridge2ai/standards-schema-all/:UseCaseContainer classDiagram class UseCaseContainer UseCaseContainer : use_cases UseCaseContainer ..> UseCase : use_cases","title":"Class: UseCaseContainer"},{"location":"UseCaseContainer/#slots","text":"Name Cardinality and Range Description Inheritance use_cases 0..* UseCase Collection of associated use cases direct","title":"Slots"},{"location":"UseCaseContainer/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"UseCaseContainer/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"UseCaseContainer/#mappings","text":"Mapping Type Mapped Value self https://w3id.org/bridge2ai/standards-schema-all/:UseCaseContainer native https://w3id.org/bridge2ai/standards-schema-all/:UseCaseContainer","title":"Mappings"},{"location":"UseCaseContainer/#linkml-source","text":"","title":"LinkML Source"},{"location":"UseCaseContainer/#direct","text":"name: UseCaseContainer description: A container for UseCase. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slots: - use_cases","title":"Direct"},{"location":"UseCaseContainer/#induced","text":"name: UseCaseContainer description: A container for UseCase. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 attributes: use_cases: name: use_cases description: Collection of associated use cases from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 multivalued: true alias: use_cases owner: UseCaseContainer domain_of: - UseCaseContainer range: UseCase inlined: true inlined_as_list: true","title":"Induced"},{"location":"WikidataIdentifier/","text":"Type: WikidataIdentifier Identifier from Wikidata open knowledge base. 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NamedThing A generic grouping for any identifiable entity OntologyOrVocabulary A set of concepts and categories, potentially defined or accompanied by their... Organization Represents a group or organization related to or responsible for one or more ... OrganizationContainer A container for Organizations ReferenceDataOrDataset Represents a resource in the Bridge2AI Standards Registry serving as a standa... ReferenceImplementation Represents an implementation of one or more standards or tools in the Bridge2... Registry Represents a resource in the Bridge2AI Standards Registry serving to curate a... SoftwareOrTool Represents a piece of software or computational tool in the Bridge2AI Standar... TrainingProgram Represents a training program for skills and experience related to standards ... UseCase Represents a use case for Bridge2AI standards UseCaseContainer A container for UseCase Slots Slot Description alternative_standards_and_tools List of identifiers of standards and tools; those not explicitly planned to b... category Name of the high level ontology class in which this entity is categorized collection Tags for specific sets of standards concerns_data_topic Subject standard is generally applied in the context of object data topic contribution_date The date on which the node was added contributor_github_name The name of the github user who added this node contributor_name The name of the person who added this node contributor_orcid The ORCiD of the person who added this node data_standardortools_collection Collection of associated data standards or tools data_substrates Relevance of the use case to one or more data substrates data_substrates_collection Collection of associated data substrates data_topics Relevance of the use case to one or more data topics data_topics_collection Collection of associated data topics description A human-readable description for a thing edam_id Unique EDAM identifier enables Other use case(s) this use case supports or makes possible file_extensions Commonly used file extensions for this substrate formal_specification Relevant code repository or other location for a formal specification of the ... has_relevant_organization Subject standard is managed or otherwise guided buy the object organization(s... id A unique identifier for a thing involved_in_experimental_design True if use case is likely to be implemented as part of an experimental proce... involved_in_metadata_management True if use case is likely to be implemented as part of metadata indexing, sa... involved_in_quality_control True is use case is likely to be implemented as part of data validation opera... is_open Is the standard or tool FAIR and available free of cost? known_limitations Any current obstacles to implementing this use case limitations Potential obstacles particular to this substrate or implementation mesh_id Unique MeSH identifier metadata_storage Data Substrate in which metadata is stored name A human-readable name for a thing ncit_id Unique NCIt Identifier node_property A grouping for any property that holds between a node and a value not_relevant_to_dgps Is the standard or tool currently relevant to DGPs? organizations Collection of associated organizations publication Relevant publication for the standard or tool purpose_detail Text description of the standard or tool related_to A relationship that is asserted between two named things relevance_to_dgps Relevance of the use case to one or more DGPs requires_registration Does usage of the standard or tool require registrion of a user or group with... ror_id Unique ROR identifier standards_and_tools_for_dgp_use List of identifiers of standards and tools; those planned to be used, or alre... subclass_of Holds between two classes where the domain class is a specialization of the r... topic_involves_anatomy A relationship between a DataTopic and an anatomical entity type A generic slot for any label corresponding to the label for an entity type a... url URL for basic documentation of the standard or tool use_case_category Category of the UseCase use_cases Collection of associated use cases use_conditions Applicable conditions on use, as defined by the Data Use Ontology (DUO) wikidata_id Unique Wikidata identifier xref URI of corresponding class in an ontology of experimental procedures, in CURI... 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Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\". from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: type domain: NamedThing designates_type: true alias: category owner: AnatomicalEntity domain_of: - NamedThing range: category_type name: name: name description: A human-readable name for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:name alias: name owner: AnatomicalEntity domain_of: - NamedThing range: string description: name: description description: A human-readable description for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:description alias: description owner: AnatomicalEntity domain_of: - NamedThing range: string subclass_of: name: subclass_of description: Holds between two classes where the domain class is a specialization of the range class. from_schema: https://w3id.org/bridge2ai/standards-schema-all exact_mappings: - rdfs:subClassOf - MESH:isa narrow_mappings: - rdfs:subPropertyOf rank: 1000 is_a: related_to domain: NamedThing multivalued: true inherited: true alias: subclass_of owner: AnatomicalEntity domain_of: - NamedThing range: NamedThing related_to: name: related_to description: A relationship that is asserted between two named things. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 domain: NamedThing multivalued: true inherited: true alias: related_to owner: AnatomicalEntity domain_of: - NamedThing - Organization symmetric: true range: NamedThing contributor_name: name: contributor_name description: The name of the person who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_name owner: AnatomicalEntity domain_of: - NamedThing range: string contributor_github_name: name: contributor_github_name description: The name of the github user who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_github_name owner: AnatomicalEntity domain_of: - NamedThing range: string contributor_orcid: name: contributor_orcid description: The ORCiD of the person who added this node. examples: - value: ORCID:0000-0001-1234-5678 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_orcid owner: AnatomicalEntity domain_of: - NamedThing range: uriorcurie contribution_date: name: contribution_date description: The date on which the node was added. examples: - value: '2023-03-20' from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contribution_date owner: AnatomicalEntity domain_of: - NamedThing range: date","title":"Induced"},{"location":"BiomedicalStandard/","text":"Class: BiomedicalStandard Represents a standard in the Bridge2AI Standards Registry with particular applications or relevance to clinical or biomedical research purposes. URI: https://w3id.org/bridge2ai/standards-schema-all/:BiomedicalStandard classDiagram class BiomedicalStandard DataStandard <|-- BiomedicalStandard BiomedicalStandard : category BiomedicalStandard : collection BiomedicalStandard ..> StandardsCollectionTag : collection BiomedicalStandard : concerns_data_topic BiomedicalStandard ..> DataTopic : concerns_data_topic BiomedicalStandard : contribution_date BiomedicalStandard : contributor_github_name BiomedicalStandard : contributor_name BiomedicalStandard : contributor_orcid BiomedicalStandard : description BiomedicalStandard : formal_specification BiomedicalStandard : has_relevant_organization BiomedicalStandard ..> Organization : has_relevant_organization BiomedicalStandard : id BiomedicalStandard : is_open BiomedicalStandard : name BiomedicalStandard : not_relevant_to_dgps BiomedicalStandard : publication BiomedicalStandard : purpose_detail BiomedicalStandard : related_to BiomedicalStandard ..> NamedThing : related_to BiomedicalStandard : requires_registration BiomedicalStandard : subclass_of BiomedicalStandard ..> NamedThing : subclass_of BiomedicalStandard : url Inheritance NamedThing DataStandardOrTool DataStandard BiomedicalStandard Slots Name Cardinality and Range Description Inheritance collection 0..* StandardsCollectionTag Tags for specific sets of standards DataStandardOrTool concerns_data_topic 0..* DataTopic Subject standard is generally applied in the context of object data topic DataStandardOrTool has_relevant_organization 0..* Organization Subject standard is managed or otherwise guided buy the object organization(s... DataStandardOrTool purpose_detail 0..1 String Text description of the standard or tool DataStandardOrTool is_open 0..1 Boolean Is the standard or tool FAIR and available free of cost? DataStandardOrTool requires_registration 0..1 Boolean Does usage of the standard or tool require registrion of a user or group with... DataStandardOrTool url 0..1 Uriorcurie URL for basic documentation of the standard or tool DataStandardOrTool publication 0..1 Uriorcurie Relevant publication for the standard or tool DataStandardOrTool formal_specification 0..1 Uriorcurie Relevant code repository or other location for a formal specification of the ... DataStandardOrTool not_relevant_to_dgps 0..1 Boolean Is the standard or tool currently relevant to DGPs? DataStandardOrTool id 1..1 Uriorcurie A unique identifier for a thing NamedThing category 0..1 CategoryType Name of the high level ontology class in which this entity is categorized NamedThing name 0..1 String A human-readable name for a thing NamedThing description 0..1 String A human-readable description for a thing NamedThing subclass_of 0..* NamedThing Holds between two classes where the domain class is a specialization of the r... NamedThing related_to 0..* NamedThing A relationship that is asserted between two named things NamedThing contributor_name 0..1 String The name of the person who added this node NamedThing contributor_github_name 0..1 String The name of the github user who added this node NamedThing contributor_orcid 0..1 Uriorcurie The ORCiD of the person who added this node NamedThing contribution_date 0..1 Date The date on which the node was added NamedThing Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all Mappings Mapping Type Mapped Value self https://w3id.org/bridge2ai/standards-schema-all/:BiomedicalStandard native https://w3id.org/bridge2ai/standards-schema-all/:BiomedicalStandard LinkML Source Direct name: BiomedicalStandard description: Represents a standard in the Bridge2AI Standards Registry with particular applications or relevance to clinical or biomedical research purposes. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: DataStandard Induced name: BiomedicalStandard description: Represents a standard in the Bridge2AI Standards Registry with particular applications or relevance to clinical or biomedical research purposes. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: DataStandard attributes: collection: name: collection description: Tags for specific sets of standards. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing multivalued: true alias: collection owner: BiomedicalStandard domain_of: - DataStandardOrTool range: StandardsCollectionTag concerns_data_topic: name: concerns_data_topic description: Subject standard is generally applied in the context of object data topic. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: related_to domain: DataStandardOrTool multivalued: true inherited: true alias: concerns_data_topic owner: BiomedicalStandard domain_of: - DataStandardOrTool range: DataTopic has_relevant_organization: name: has_relevant_organization description: Subject standard is managed or otherwise guided buy the object organization(s). from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: related_to domain: DataStandardOrTool multivalued: true inherited: true alias: has_relevant_organization owner: BiomedicalStandard domain_of: - DataStandardOrTool range: Organization purpose_detail: name: purpose_detail description: Text description of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: purpose_detail owner: BiomedicalStandard domain_of: - DataStandardOrTool range: string is_open: name: is_open description: Is the standard or tool FAIR and available free of cost? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: is_open owner: BiomedicalStandard domain_of: - DataStandardOrTool range: boolean requires_registration: name: requires_registration description: Does usage of the standard or tool require registrion of a user or group with some organization or managerial body? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: requires_registration owner: BiomedicalStandard domain_of: - DataStandardOrTool range: boolean url: name: url description: URL for basic documentation of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: url owner: BiomedicalStandard domain_of: - DataStandardOrTool - Organization range: uriorcurie publication: name: publication description: Relevant publication for the standard or tool. Prefer a DOI or PUBMED. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: publication owner: BiomedicalStandard domain_of: - DataStandardOrTool range: uriorcurie formal_specification: name: formal_specification description: Relevant code repository or other location for a formal specification of the standard or tool. Often a URL, particularly to a Git repository. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: formal_specification owner: BiomedicalStandard domain_of: - DataStandardOrTool range: uriorcurie not_relevant_to_dgps: name: not_relevant_to_dgps description: Is the standard or tool currently relevant to DGPs? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: not_relevant_to_dgps owner: BiomedicalStandard domain_of: - DataStandardOrTool range: boolean id: name: id description: A unique identifier for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:identifier identifier: true alias: id owner: BiomedicalStandard domain_of: - NamedThing range: uriorcurie required: true category: name: category description: Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\". from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: type domain: NamedThing designates_type: true alias: category owner: BiomedicalStandard domain_of: - NamedThing range: category_type name: name: name description: A human-readable name for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:name alias: name owner: BiomedicalStandard domain_of: - NamedThing range: string description: name: description description: A human-readable description for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:description alias: description owner: BiomedicalStandard domain_of: - NamedThing range: string subclass_of: name: subclass_of description: Holds between two classes where the domain class is a specialization of the range class. from_schema: https://w3id.org/bridge2ai/standards-schema-all exact_mappings: - rdfs:subClassOf - MESH:isa narrow_mappings: - rdfs:subPropertyOf rank: 1000 is_a: related_to domain: NamedThing multivalued: true inherited: true alias: subclass_of owner: BiomedicalStandard domain_of: - NamedThing range: NamedThing related_to: name: related_to description: A relationship that is asserted between two named things. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 domain: NamedThing multivalued: true inherited: true alias: related_to owner: BiomedicalStandard domain_of: - NamedThing - Organization symmetric: true range: NamedThing contributor_name: name: contributor_name description: The name of the person who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_name owner: BiomedicalStandard domain_of: - NamedThing range: string contributor_github_name: name: contributor_github_name description: The name of the github user who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_github_name owner: BiomedicalStandard domain_of: - NamedThing range: string contributor_orcid: name: contributor_orcid description: The ORCiD of the person who added this node. examples: - value: ORCID:0000-0001-1234-5678 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_orcid owner: BiomedicalStandard domain_of: - NamedThing range: uriorcurie contribution_date: name: contribution_date description: The date on which the node was added. examples: - value: '2023-03-20' from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contribution_date owner: BiomedicalStandard domain_of: - NamedThing range: date","title":"Class: BiomedicalStandard"},{"location":"BiomedicalStandard/#class-biomedicalstandard","text":"Represents a standard in the Bridge2AI Standards Registry with particular applications or relevance to clinical or biomedical research purposes. URI: https://w3id.org/bridge2ai/standards-schema-all/:BiomedicalStandard classDiagram class BiomedicalStandard DataStandard <|-- BiomedicalStandard BiomedicalStandard : category BiomedicalStandard : collection BiomedicalStandard ..> StandardsCollectionTag : collection BiomedicalStandard : concerns_data_topic BiomedicalStandard ..> DataTopic : concerns_data_topic BiomedicalStandard : contribution_date BiomedicalStandard : contributor_github_name BiomedicalStandard : contributor_name BiomedicalStandard : contributor_orcid BiomedicalStandard : description BiomedicalStandard : formal_specification BiomedicalStandard : has_relevant_organization BiomedicalStandard ..> Organization : has_relevant_organization BiomedicalStandard : id BiomedicalStandard : is_open BiomedicalStandard : name BiomedicalStandard : not_relevant_to_dgps BiomedicalStandard : publication BiomedicalStandard : purpose_detail BiomedicalStandard : related_to BiomedicalStandard ..> NamedThing : related_to BiomedicalStandard : requires_registration BiomedicalStandard : subclass_of BiomedicalStandard ..> NamedThing : subclass_of BiomedicalStandard : url","title":"Class: BiomedicalStandard"},{"location":"BiomedicalStandard/#inheritance","text":"NamedThing DataStandardOrTool DataStandard BiomedicalStandard","title":"Inheritance"},{"location":"BiomedicalStandard/#slots","text":"Name Cardinality and Range Description Inheritance collection 0..* StandardsCollectionTag Tags for specific sets of standards DataStandardOrTool concerns_data_topic 0..* DataTopic Subject standard is generally applied in the context of object data topic DataStandardOrTool has_relevant_organization 0..* Organization Subject standard is managed or otherwise guided buy the object organization(s... DataStandardOrTool purpose_detail 0..1 String Text description of the standard or tool DataStandardOrTool is_open 0..1 Boolean Is the standard or tool FAIR and available free of cost? DataStandardOrTool requires_registration 0..1 Boolean Does usage of the standard or tool require registrion of a user or group with... DataStandardOrTool url 0..1 Uriorcurie URL for basic documentation of the standard or tool DataStandardOrTool publication 0..1 Uriorcurie Relevant publication for the standard or tool DataStandardOrTool formal_specification 0..1 Uriorcurie Relevant code repository or other location for a formal specification of the ... DataStandardOrTool not_relevant_to_dgps 0..1 Boolean Is the standard or tool currently relevant to DGPs? DataStandardOrTool id 1..1 Uriorcurie A unique identifier for a thing NamedThing category 0..1 CategoryType Name of the high level ontology class in which this entity is categorized NamedThing name 0..1 String A human-readable name for a thing NamedThing description 0..1 String A human-readable description for a thing NamedThing subclass_of 0..* NamedThing Holds between two classes where the domain class is a specialization of the r... NamedThing related_to 0..* NamedThing A relationship that is asserted between two named things NamedThing contributor_name 0..1 String The name of the person who added this node NamedThing contributor_github_name 0..1 String The name of the github user who added this node NamedThing contributor_orcid 0..1 Uriorcurie The ORCiD of the person who added this node NamedThing contribution_date 0..1 Date The date on which the node was added NamedThing","title":"Slots"},{"location":"BiomedicalStandard/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"BiomedicalStandard/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"BiomedicalStandard/#mappings","text":"Mapping Type Mapped Value self https://w3id.org/bridge2ai/standards-schema-all/:BiomedicalStandard native https://w3id.org/bridge2ai/standards-schema-all/:BiomedicalStandard","title":"Mappings"},{"location":"BiomedicalStandard/#linkml-source","text":"","title":"LinkML Source"},{"location":"BiomedicalStandard/#direct","text":"name: BiomedicalStandard description: Represents a standard in the Bridge2AI Standards Registry with particular applications or relevance to clinical or biomedical research purposes. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: DataStandard","title":"Direct"},{"location":"BiomedicalStandard/#induced","text":"name: BiomedicalStandard description: Represents a standard in the Bridge2AI Standards Registry with particular applications or relevance to clinical or biomedical research purposes. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: DataStandard attributes: collection: name: collection description: Tags for specific sets of standards. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing multivalued: true alias: collection owner: BiomedicalStandard domain_of: - DataStandardOrTool range: StandardsCollectionTag concerns_data_topic: name: concerns_data_topic description: Subject standard is generally applied in the context of object data topic. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: related_to domain: DataStandardOrTool multivalued: true inherited: true alias: concerns_data_topic owner: BiomedicalStandard domain_of: - DataStandardOrTool range: DataTopic has_relevant_organization: name: has_relevant_organization description: Subject standard is managed or otherwise guided buy the object organization(s). from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: related_to domain: DataStandardOrTool multivalued: true inherited: true alias: has_relevant_organization owner: BiomedicalStandard domain_of: - DataStandardOrTool range: Organization purpose_detail: name: purpose_detail description: Text description of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: purpose_detail owner: BiomedicalStandard domain_of: - DataStandardOrTool range: string is_open: name: is_open description: Is the standard or tool FAIR and available free of cost? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: is_open owner: BiomedicalStandard domain_of: - DataStandardOrTool range: boolean requires_registration: name: requires_registration description: Does usage of the standard or tool require registrion of a user or group with some organization or managerial body? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: requires_registration owner: BiomedicalStandard domain_of: - DataStandardOrTool range: boolean url: name: url description: URL for basic documentation of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: url owner: BiomedicalStandard domain_of: - DataStandardOrTool - Organization range: uriorcurie publication: name: publication description: Relevant publication for the standard or tool. Prefer a DOI or PUBMED. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: publication owner: BiomedicalStandard domain_of: - DataStandardOrTool range: uriorcurie formal_specification: name: formal_specification description: Relevant code repository or other location for a formal specification of the standard or tool. Often a URL, particularly to a Git repository. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: formal_specification owner: BiomedicalStandard domain_of: - DataStandardOrTool range: uriorcurie not_relevant_to_dgps: name: not_relevant_to_dgps description: Is the standard or tool currently relevant to DGPs? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: not_relevant_to_dgps owner: BiomedicalStandard domain_of: - DataStandardOrTool range: boolean id: name: id description: A unique identifier for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:identifier identifier: true alias: id owner: BiomedicalStandard domain_of: - NamedThing range: uriorcurie required: true category: name: category description: Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\". from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: type domain: NamedThing designates_type: true alias: category owner: BiomedicalStandard domain_of: - NamedThing range: category_type name: name: name description: A human-readable name for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:name alias: name owner: BiomedicalStandard domain_of: - NamedThing range: string description: name: description description: A human-readable description for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:description alias: description owner: BiomedicalStandard domain_of: - NamedThing range: string subclass_of: name: subclass_of description: Holds between two classes where the domain class is a specialization of the range class. from_schema: https://w3id.org/bridge2ai/standards-schema-all exact_mappings: - rdfs:subClassOf - MESH:isa narrow_mappings: - rdfs:subPropertyOf rank: 1000 is_a: related_to domain: NamedThing multivalued: true inherited: true alias: subclass_of owner: BiomedicalStandard domain_of: - NamedThing range: NamedThing related_to: name: related_to description: A relationship that is asserted between two named things. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 domain: NamedThing multivalued: true inherited: true alias: related_to owner: BiomedicalStandard domain_of: - NamedThing - Organization symmetric: true range: NamedThing contributor_name: name: contributor_name description: The name of the person who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_name owner: BiomedicalStandard domain_of: - NamedThing range: string contributor_github_name: name: contributor_github_name description: The name of the github user who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_github_name owner: BiomedicalStandard domain_of: - NamedThing range: string contributor_orcid: name: contributor_orcid description: The ORCiD of the person who added this node. examples: - value: ORCID:0000-0001-1234-5678 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_orcid owner: BiomedicalStandard domain_of: - NamedThing range: uriorcurie contribution_date: name: contribution_date description: The date on which the node was added. examples: - value: '2023-03-20' from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contribution_date owner: BiomedicalStandard domain_of: - NamedThing range: date","title":"Induced"},{"location":"Boolean/","text":"Type: Boolean A binary (true or false) value URI: xsd:boolean base : Bool uri : xsd:boolean repr : bool Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Type: Boolean"},{"location":"Boolean/#type-boolean","text":"A binary (true or false) value URI: xsd:boolean base : Bool uri : xsd:boolean repr : bool","title":"Type: Boolean"},{"location":"Boolean/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Boolean/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"CategoryType/","text":"Type: CategoryType A primitive type in which the value denotes a class within the model. URI: xsd:anyURI base : URIorCURIE uri : xsd:anyURI repr : str typeof : uriorcurie Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Type: CategoryType"},{"location":"CategoryType/#type-categorytype","text":"A primitive type in which the value denotes a class within the model. URI: xsd:anyURI base : URIorCURIE uri : xsd:anyURI repr : str typeof : uriorcurie","title":"Type: CategoryType"},{"location":"CategoryType/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"CategoryType/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"Curie/","text":"Type: Curie a compact URI URI: xsd:string base : Curie uri : xsd:string repr : str Comments in RDF serializations this MUST be expanded to a URI in non-RDF serializations MAY be serialized as the compact representation Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Type: Curie"},{"location":"Curie/#type-curie","text":"a compact URI URI: xsd:string base : Curie uri : xsd:string repr : str","title":"Type: Curie"},{"location":"Curie/#comments","text":"in RDF serializations this MUST be expanded to a URI in non-RDF serializations MAY be serialized as the compact representation","title":"Comments"},{"location":"Curie/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Curie/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"DataGeneratingProject/","text":"Enum: DataGeneratingProject One of the Bridge2AI Data Generating Projects. URI: DataGeneratingProject Permissible Values Value Meaning Description aireadi https://reporter.nih.gov/project-details/10471118 AI-READI: Uncovering the details of how human health is restored after diseas... chorus https://reporter.nih.gov/project-details/10472824 CHoRUS: Collaborative Hospital Repository Uniting Standards cm4ai https://reporter.nih.gov/project-details/10473403 CM4AI: Cell Maps for AI voice https://reporter.nih.gov/project-details/10473236 Voice as a Biomarker of Health: Building an ethically sourced, bioaccoustic d... Slots Name Description relevance_to_dgps Relevance of the use case to one or more DGPs Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all LinkML Source name: DataGeneratingProject description: One of the Bridge2AI Data Generating Projects. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 permissible_values: aireadi: text: aireadi description: 'AI-READI: Uncovering the details of how human health is restored after disease, using type 2 diabetes as a model.' meaning: https://reporter.nih.gov/project-details/10471118 chorus: text: chorus description: 'CHoRUS: Collaborative Hospital Repository Uniting Standards. Using imaging, clinical, and other data collected in an ICU setting for diagnosis and risk prediction.' meaning: https://reporter.nih.gov/project-details/10472824 cm4ai: text: cm4ai description: 'CM4AI: Cell Maps for AI. Mapping spatiotemporal architecture of human cells to interpret cell structure/function in health and disease.' meaning: https://reporter.nih.gov/project-details/10473403 voice: text: voice description: 'Voice as a Biomarker of Health: Building an ethically sourced, bioaccoustic database to understand disease like never before.' meaning: https://reporter.nih.gov/project-details/10473236","title":"Enum: DataGeneratingProject"},{"location":"DataGeneratingProject/#enum-datageneratingproject","text":"One of the Bridge2AI Data Generating Projects. 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Often a URL, particularly to a Git repository. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: formal_specification owner: DataStandard domain_of: - DataStandardOrTool range: uriorcurie not_relevant_to_dgps: name: not_relevant_to_dgps description: Is the standard or tool currently relevant to DGPs? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: not_relevant_to_dgps owner: DataStandard domain_of: - DataStandardOrTool range: boolean id: name: id description: A unique identifier for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:identifier identifier: true alias: id owner: DataStandard domain_of: - NamedThing range: uriorcurie required: true category: name: category description: Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\". from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: type domain: NamedThing designates_type: true alias: category owner: DataStandard domain_of: - NamedThing range: category_type name: name: name description: A human-readable name for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:name alias: name owner: DataStandard domain_of: - NamedThing range: string description: name: description description: A human-readable description for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:description alias: description owner: DataStandard domain_of: - NamedThing range: string subclass_of: name: subclass_of description: Holds between two classes where the domain class is a specialization of the range class. from_schema: https://w3id.org/bridge2ai/standards-schema-all exact_mappings: - rdfs:subClassOf - MESH:isa narrow_mappings: - rdfs:subPropertyOf rank: 1000 is_a: related_to domain: NamedThing multivalued: true inherited: true alias: subclass_of owner: DataStandard domain_of: - NamedThing range: NamedThing related_to: name: related_to description: A relationship that is asserted between two named things. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 domain: NamedThing multivalued: true inherited: true alias: related_to owner: DataStandard domain_of: - NamedThing - Organization symmetric: true range: NamedThing contributor_name: name: contributor_name description: The name of the person who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_name owner: DataStandard domain_of: - NamedThing range: string contributor_github_name: name: contributor_github_name description: The name of the github user who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_github_name owner: DataStandard domain_of: - NamedThing range: string contributor_orcid: name: contributor_orcid description: The ORCiD of the person who added this node. examples: - value: ORCID:0000-0001-1234-5678 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_orcid owner: DataStandard domain_of: - NamedThing range: uriorcurie contribution_date: name: contribution_date description: The date on which the node was added. examples: - value: '2023-03-20' from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contribution_date owner: DataStandard domain_of: - NamedThing range: date","title":"Induced"},{"location":"DataStandardOrTool/","text":"Class: DataStandardOrTool Represents a standard or tool in the Bridge2AI Standards Registry. URI: https://w3id.org/bridge2ai/standards-schema-all/:DataStandardOrTool classDiagram class DataStandardOrTool NamedThing <|-- DataStandardOrTool DataStandardOrTool <|-- DataStandard DataStandardOrTool <|-- Registry DataStandardOrTool <|-- OntologyOrVocabulary DataStandardOrTool <|-- ModelRepository DataStandardOrTool <|-- ReferenceDataOrDataset DataStandardOrTool <|-- SoftwareOrTool DataStandardOrTool <|-- ReferenceImplementation DataStandardOrTool <|-- TrainingProgram DataStandardOrTool : category DataStandardOrTool : collection DataStandardOrTool ..> StandardsCollectionTag : collection DataStandardOrTool : concerns_data_topic DataStandardOrTool ..> DataTopic : concerns_data_topic DataStandardOrTool : contribution_date DataStandardOrTool : contributor_github_name DataStandardOrTool : contributor_name DataStandardOrTool : contributor_orcid DataStandardOrTool : description DataStandardOrTool : formal_specification DataStandardOrTool : has_relevant_organization DataStandardOrTool ..> Organization : has_relevant_organization DataStandardOrTool : id DataStandardOrTool : is_open DataStandardOrTool : name DataStandardOrTool : not_relevant_to_dgps DataStandardOrTool : publication DataStandardOrTool : purpose_detail DataStandardOrTool : related_to DataStandardOrTool ..> NamedThing : related_to DataStandardOrTool : requires_registration DataStandardOrTool : subclass_of DataStandardOrTool ..> NamedThing : subclass_of DataStandardOrTool : url Inheritance NamedThing DataStandardOrTool DataStandard Registry OntologyOrVocabulary ModelRepository ReferenceDataOrDataset SoftwareOrTool ReferenceImplementation TrainingProgram Slots Name Cardinality and Range Description Inheritance collection 0..* StandardsCollectionTag Tags for specific sets of standards direct concerns_data_topic 0..* DataTopic Subject standard is generally applied in the context of object data topic direct has_relevant_organization 0..* Organization Subject standard is managed or otherwise guided buy the object organization(s... direct purpose_detail 0..1 String Text description of the standard or tool direct is_open 0..1 Boolean Is the standard or tool FAIR and available free of cost? direct requires_registration 0..1 Boolean Does usage of the standard or tool require registrion of a user or group with... direct url 0..1 Uriorcurie URL for basic documentation of the standard or tool direct publication 0..1 Uriorcurie Relevant publication for the standard or tool direct formal_specification 0..1 Uriorcurie Relevant code repository or other location for a formal specification of the ... direct not_relevant_to_dgps 0..1 Boolean Is the standard or tool currently relevant to DGPs? direct id 1..1 Uriorcurie A unique identifier for a thing NamedThing category 0..1 CategoryType Name of the high level ontology class in which this entity is categorized NamedThing name 0..1 String A human-readable name for a thing NamedThing description 0..1 String A human-readable description for a thing NamedThing subclass_of 0..* NamedThing Holds between two classes where the domain class is a specialization of the r... NamedThing related_to 0..* NamedThing A relationship that is asserted between two named things NamedThing contributor_name 0..1 String The name of the person who added this node NamedThing contributor_github_name 0..1 String The name of the github user who added this node NamedThing contributor_orcid 0..1 Uriorcurie The ORCiD of the person who added this node NamedThing contribution_date 0..1 Date The date on which the node was added NamedThing Usages used by used in type used UseCase standards_and_tools_for_dgp_use range DataStandardOrTool UseCase alternative_standards_and_tools range DataStandardOrTool DataStandardOrTool concerns_data_topic domain DataStandardOrTool DataStandardOrTool has_relevant_organization domain DataStandardOrTool DataStandard concerns_data_topic domain DataStandardOrTool DataStandard has_relevant_organization domain DataStandardOrTool BiomedicalStandard concerns_data_topic domain DataStandardOrTool BiomedicalStandard has_relevant_organization domain DataStandardOrTool Registry concerns_data_topic domain DataStandardOrTool Registry has_relevant_organization domain DataStandardOrTool OntologyOrVocabulary concerns_data_topic domain DataStandardOrTool OntologyOrVocabulary has_relevant_organization domain DataStandardOrTool ModelRepository concerns_data_topic domain DataStandardOrTool ModelRepository has_relevant_organization domain DataStandardOrTool ReferenceDataOrDataset concerns_data_topic domain DataStandardOrTool ReferenceDataOrDataset has_relevant_organization domain DataStandardOrTool SoftwareOrTool concerns_data_topic domain DataStandardOrTool SoftwareOrTool has_relevant_organization domain DataStandardOrTool ReferenceImplementation concerns_data_topic domain DataStandardOrTool ReferenceImplementation has_relevant_organization domain DataStandardOrTool TrainingProgram concerns_data_topic domain DataStandardOrTool TrainingProgram has_relevant_organization domain DataStandardOrTool DataStandardOrToolContainer data_standardortools_collection range DataStandardOrTool Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all Mappings Mapping Type Mapped Value self https://w3id.org/bridge2ai/standards-schema-all/:DataStandardOrTool native https://w3id.org/bridge2ai/standards-schema-all/:DataStandardOrTool LinkML Source Direct name: DataStandardOrTool description: Represents a standard or tool in the Bridge2AI Standards Registry. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: NamedThing slots: - collection - concerns_data_topic - has_relevant_organization - purpose_detail - is_open - requires_registration - url - publication - formal_specification - not_relevant_to_dgps Induced name: DataStandardOrTool description: Represents a standard or tool in the Bridge2AI Standards Registry. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: NamedThing attributes: collection: name: collection description: Tags for specific sets of standards. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing multivalued: true alias: collection owner: DataStandardOrTool domain_of: - DataStandardOrTool range: StandardsCollectionTag concerns_data_topic: name: concerns_data_topic description: Subject standard is generally applied in the context of object data topic. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: related_to domain: DataStandardOrTool multivalued: true inherited: true alias: concerns_data_topic owner: DataStandardOrTool domain_of: - DataStandardOrTool range: DataTopic has_relevant_organization: name: has_relevant_organization description: Subject standard is managed or otherwise guided buy the object organization(s). from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: related_to domain: DataStandardOrTool multivalued: true inherited: true alias: has_relevant_organization owner: DataStandardOrTool domain_of: - DataStandardOrTool range: Organization purpose_detail: name: purpose_detail description: Text description of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: purpose_detail owner: DataStandardOrTool domain_of: - DataStandardOrTool range: string is_open: name: is_open description: Is the standard or tool FAIR and available free of cost? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: is_open owner: DataStandardOrTool domain_of: - DataStandardOrTool range: boolean requires_registration: name: requires_registration description: Does usage of the standard or tool require registrion of a user or group with some organization or managerial body? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: requires_registration owner: DataStandardOrTool domain_of: - DataStandardOrTool range: boolean url: name: url description: URL for basic documentation of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: url owner: DataStandardOrTool domain_of: - DataStandardOrTool - Organization range: uriorcurie publication: name: publication description: Relevant publication for the standard or tool. Prefer a DOI or PUBMED. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: publication owner: DataStandardOrTool domain_of: - DataStandardOrTool range: uriorcurie formal_specification: name: formal_specification description: Relevant code repository or other location for a formal specification of the standard or tool. Often a URL, particularly to a Git repository. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: formal_specification owner: DataStandardOrTool domain_of: - DataStandardOrTool range: uriorcurie not_relevant_to_dgps: name: not_relevant_to_dgps description: Is the standard or tool currently relevant to DGPs? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: not_relevant_to_dgps owner: DataStandardOrTool domain_of: - DataStandardOrTool range: boolean id: name: id description: A unique identifier for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:identifier identifier: true alias: id owner: DataStandardOrTool domain_of: - NamedThing range: uriorcurie required: true category: name: category description: Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\". from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: type domain: NamedThing designates_type: true alias: category owner: DataStandardOrTool domain_of: - NamedThing range: category_type name: name: name description: A human-readable name for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:name alias: name owner: DataStandardOrTool domain_of: - NamedThing range: string description: name: description description: A human-readable description for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:description alias: description owner: DataStandardOrTool domain_of: - NamedThing range: string subclass_of: name: subclass_of description: Holds between two classes where the domain class is a specialization of the range class. from_schema: https://w3id.org/bridge2ai/standards-schema-all exact_mappings: - rdfs:subClassOf - MESH:isa narrow_mappings: - rdfs:subPropertyOf rank: 1000 is_a: related_to domain: NamedThing multivalued: true inherited: true alias: subclass_of owner: DataStandardOrTool domain_of: - NamedThing range: NamedThing related_to: name: related_to description: A relationship that is asserted between two named things. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 domain: NamedThing multivalued: true inherited: true alias: related_to owner: DataStandardOrTool domain_of: - NamedThing - Organization symmetric: true range: NamedThing contributor_name: name: contributor_name description: The name of the person who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_name owner: DataStandardOrTool domain_of: - NamedThing range: string contributor_github_name: name: contributor_github_name description: The name of the github user who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_github_name owner: DataStandardOrTool domain_of: - NamedThing range: string contributor_orcid: name: contributor_orcid description: The ORCiD of the person who added this node. examples: - value: ORCID:0000-0001-1234-5678 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_orcid owner: DataStandardOrTool domain_of: - NamedThing range: uriorcurie contribution_date: name: contribution_date description: The date on which the node was added. examples: - value: '2023-03-20' from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contribution_date owner: DataStandardOrTool domain_of: - NamedThing range: date","title":"Class: DataStandardOrTool"},{"location":"DataStandardOrTool/#class-datastandardortool","text":"Represents a standard or tool in the Bridge2AI Standards Registry. URI: https://w3id.org/bridge2ai/standards-schema-all/:DataStandardOrTool classDiagram class DataStandardOrTool NamedThing <|-- DataStandardOrTool DataStandardOrTool <|-- DataStandard DataStandardOrTool <|-- Registry DataStandardOrTool <|-- OntologyOrVocabulary DataStandardOrTool <|-- ModelRepository DataStandardOrTool <|-- ReferenceDataOrDataset DataStandardOrTool <|-- SoftwareOrTool DataStandardOrTool <|-- ReferenceImplementation DataStandardOrTool <|-- TrainingProgram DataStandardOrTool : category DataStandardOrTool : collection DataStandardOrTool ..> StandardsCollectionTag : collection DataStandardOrTool : concerns_data_topic DataStandardOrTool ..> DataTopic : concerns_data_topic DataStandardOrTool : contribution_date DataStandardOrTool : contributor_github_name DataStandardOrTool : contributor_name DataStandardOrTool : contributor_orcid DataStandardOrTool : description DataStandardOrTool : formal_specification DataStandardOrTool : has_relevant_organization DataStandardOrTool ..> Organization : has_relevant_organization DataStandardOrTool : id DataStandardOrTool : is_open DataStandardOrTool : name DataStandardOrTool : not_relevant_to_dgps DataStandardOrTool : publication DataStandardOrTool : purpose_detail DataStandardOrTool : related_to DataStandardOrTool ..> NamedThing : related_to DataStandardOrTool : requires_registration DataStandardOrTool : subclass_of DataStandardOrTool ..> NamedThing : subclass_of DataStandardOrTool : url","title":"Class: DataStandardOrTool"},{"location":"DataStandardOrTool/#inheritance","text":"NamedThing DataStandardOrTool DataStandard Registry OntologyOrVocabulary ModelRepository ReferenceDataOrDataset SoftwareOrTool ReferenceImplementation TrainingProgram","title":"Inheritance"},{"location":"DataStandardOrTool/#slots","text":"Name Cardinality and Range Description Inheritance collection 0..* StandardsCollectionTag Tags for specific sets of standards direct concerns_data_topic 0..* DataTopic Subject standard is generally applied in the context of object data topic direct has_relevant_organization 0..* Organization Subject standard is managed or otherwise guided buy the object organization(s... direct purpose_detail 0..1 String Text description of the standard or tool direct is_open 0..1 Boolean Is the standard or tool FAIR and available free of cost? direct requires_registration 0..1 Boolean Does usage of the standard or tool require registrion of a user or group with... direct url 0..1 Uriorcurie URL for basic documentation of the standard or tool direct publication 0..1 Uriorcurie Relevant publication for the standard or tool direct formal_specification 0..1 Uriorcurie Relevant code repository or other location for a formal specification of the ... direct not_relevant_to_dgps 0..1 Boolean Is the standard or tool currently relevant to DGPs? direct id 1..1 Uriorcurie A unique identifier for a thing NamedThing category 0..1 CategoryType Name of the high level ontology class in which this entity is categorized NamedThing name 0..1 String A human-readable name for a thing NamedThing description 0..1 String A human-readable description for a thing NamedThing subclass_of 0..* NamedThing Holds between two classes where the domain class is a specialization of the r... NamedThing related_to 0..* NamedThing A relationship that is asserted between two named things NamedThing contributor_name 0..1 String The name of the person who added this node NamedThing contributor_github_name 0..1 String The name of the github user who added this node NamedThing contributor_orcid 0..1 Uriorcurie The ORCiD of the person who added this node NamedThing contribution_date 0..1 Date The date on which the node was added NamedThing","title":"Slots"},{"location":"DataStandardOrTool/#usages","text":"used by used in type used UseCase standards_and_tools_for_dgp_use range DataStandardOrTool UseCase alternative_standards_and_tools range DataStandardOrTool DataStandardOrTool concerns_data_topic domain DataStandardOrTool DataStandardOrTool has_relevant_organization domain DataStandardOrTool DataStandard concerns_data_topic domain DataStandardOrTool DataStandard has_relevant_organization domain DataStandardOrTool BiomedicalStandard concerns_data_topic domain DataStandardOrTool BiomedicalStandard has_relevant_organization domain DataStandardOrTool Registry concerns_data_topic domain DataStandardOrTool Registry has_relevant_organization domain DataStandardOrTool OntologyOrVocabulary concerns_data_topic domain DataStandardOrTool OntologyOrVocabulary has_relevant_organization domain DataStandardOrTool ModelRepository concerns_data_topic domain DataStandardOrTool ModelRepository has_relevant_organization domain DataStandardOrTool ReferenceDataOrDataset concerns_data_topic domain DataStandardOrTool ReferenceDataOrDataset has_relevant_organization domain DataStandardOrTool SoftwareOrTool concerns_data_topic domain DataStandardOrTool SoftwareOrTool has_relevant_organization domain DataStandardOrTool ReferenceImplementation concerns_data_topic domain DataStandardOrTool ReferenceImplementation has_relevant_organization domain DataStandardOrTool TrainingProgram concerns_data_topic domain DataStandardOrTool TrainingProgram has_relevant_organization domain DataStandardOrTool DataStandardOrToolContainer data_standardortools_collection range DataStandardOrTool","title":"Usages"},{"location":"DataStandardOrTool/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"DataStandardOrTool/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"DataStandardOrTool/#mappings","text":"Mapping Type Mapped Value self https://w3id.org/bridge2ai/standards-schema-all/:DataStandardOrTool native https://w3id.org/bridge2ai/standards-schema-all/:DataStandardOrTool","title":"Mappings"},{"location":"DataStandardOrTool/#linkml-source","text":"","title":"LinkML Source"},{"location":"DataStandardOrTool/#direct","text":"name: DataStandardOrTool description: Represents a standard or tool in the Bridge2AI Standards Registry. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: NamedThing slots: - collection - concerns_data_topic - has_relevant_organization - purpose_detail - is_open - requires_registration - url - publication - formal_specification - not_relevant_to_dgps","title":"Direct"},{"location":"DataStandardOrTool/#induced","text":"name: DataStandardOrTool description: Represents a standard or tool in the Bridge2AI Standards Registry. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: NamedThing attributes: collection: name: collection description: Tags for specific sets of standards. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing multivalued: true alias: collection owner: DataStandardOrTool domain_of: - DataStandardOrTool range: StandardsCollectionTag concerns_data_topic: name: concerns_data_topic description: Subject standard is generally applied in the context of object data topic. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: related_to domain: DataStandardOrTool multivalued: true inherited: true alias: concerns_data_topic owner: DataStandardOrTool domain_of: - DataStandardOrTool range: DataTopic has_relevant_organization: name: has_relevant_organization description: Subject standard is managed or otherwise guided buy the object organization(s). from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: related_to domain: DataStandardOrTool multivalued: true inherited: true alias: has_relevant_organization owner: DataStandardOrTool domain_of: - DataStandardOrTool range: Organization purpose_detail: name: purpose_detail description: Text description of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: purpose_detail owner: DataStandardOrTool domain_of: - DataStandardOrTool range: string is_open: name: is_open description: Is the standard or tool FAIR and available free of cost? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: is_open owner: DataStandardOrTool domain_of: - DataStandardOrTool range: boolean requires_registration: name: requires_registration description: Does usage of the standard or tool require registrion of a user or group with some organization or managerial body? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: requires_registration owner: DataStandardOrTool domain_of: - DataStandardOrTool range: boolean url: name: url description: URL for basic documentation of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: url owner: DataStandardOrTool domain_of: - DataStandardOrTool - Organization range: uriorcurie publication: name: publication description: Relevant publication for the standard or tool. Prefer a DOI or PUBMED. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: publication owner: DataStandardOrTool domain_of: - DataStandardOrTool range: uriorcurie formal_specification: name: formal_specification description: Relevant code repository or other location for a formal specification of the standard or tool. Often a URL, particularly to a Git repository. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: formal_specification owner: DataStandardOrTool domain_of: - DataStandardOrTool range: uriorcurie not_relevant_to_dgps: name: not_relevant_to_dgps description: Is the standard or tool currently relevant to DGPs? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: not_relevant_to_dgps owner: DataStandardOrTool domain_of: - DataStandardOrTool range: boolean id: name: id description: A unique identifier for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:identifier identifier: true alias: id owner: DataStandardOrTool domain_of: - NamedThing range: uriorcurie required: true category: name: category description: Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\". from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: type domain: NamedThing designates_type: true alias: category owner: DataStandardOrTool domain_of: - NamedThing range: category_type name: name: name description: A human-readable name for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:name alias: name owner: DataStandardOrTool domain_of: - NamedThing range: string description: name: description description: A human-readable description for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:description alias: description owner: DataStandardOrTool domain_of: - NamedThing range: string subclass_of: name: subclass_of description: Holds between two classes where the domain class is a specialization of the range class. from_schema: https://w3id.org/bridge2ai/standards-schema-all exact_mappings: - rdfs:subClassOf - MESH:isa narrow_mappings: - rdfs:subPropertyOf rank: 1000 is_a: related_to domain: NamedThing multivalued: true inherited: true alias: subclass_of owner: DataStandardOrTool domain_of: - NamedThing range: NamedThing related_to: name: related_to description: A relationship that is asserted between two named things. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 domain: NamedThing multivalued: true inherited: true alias: related_to owner: DataStandardOrTool domain_of: - NamedThing - Organization symmetric: true range: NamedThing contributor_name: name: contributor_name description: The name of the person who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_name owner: DataStandardOrTool domain_of: - NamedThing range: string contributor_github_name: name: contributor_github_name description: The name of the github user who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_github_name owner: DataStandardOrTool domain_of: - NamedThing range: string contributor_orcid: name: contributor_orcid description: The ORCiD of the person who added this node. examples: - value: ORCID:0000-0001-1234-5678 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_orcid owner: DataStandardOrTool domain_of: - NamedThing range: uriorcurie contribution_date: name: contribution_date description: The date on which the node was added. examples: - value: '2023-03-20' from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contribution_date owner: DataStandardOrTool domain_of: - NamedThing range: date","title":"Induced"},{"location":"DataStandardOrToolContainer/","text":"Class: DataStandardOrToolContainer A container for DataStandardOrTool(s). URI: https://w3id.org/bridge2ai/standards-schema-all/:DataStandardOrToolContainer classDiagram class DataStandardOrToolContainer DataStandardOrToolContainer : data_standardortools_collection DataStandardOrToolContainer ..> DataStandardOrTool : data_standardortools_collection Slots Name Cardinality and Range Description Inheritance data_standardortools_collection 0..* DataStandardOrTool Collection of associated data standards or tools direct Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all Mappings Mapping Type Mapped Value self https://w3id.org/bridge2ai/standards-schema-all/:DataStandardOrToolContainer native https://w3id.org/bridge2ai/standards-schema-all/:DataStandardOrToolContainer LinkML Source Direct name: DataStandardOrToolContainer description: A container for DataStandardOrTool(s). from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slots: - data_standardortools_collection Induced name: DataStandardOrToolContainer description: A container for DataStandardOrTool(s). from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 attributes: data_standardortools_collection: name: data_standardortools_collection description: Collection of associated data standards or tools from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 multivalued: true alias: data_standardortools_collection owner: DataStandardOrToolContainer domain_of: - DataStandardOrToolContainer range: DataStandardOrTool inlined: true inlined_as_list: true","title":"Class: DataStandardOrToolContainer"},{"location":"DataStandardOrToolContainer/#class-datastandardortoolcontainer","text":"A container for DataStandardOrTool(s). URI: https://w3id.org/bridge2ai/standards-schema-all/:DataStandardOrToolContainer classDiagram class DataStandardOrToolContainer DataStandardOrToolContainer : data_standardortools_collection DataStandardOrToolContainer ..> DataStandardOrTool : data_standardortools_collection","title":"Class: DataStandardOrToolContainer"},{"location":"DataStandardOrToolContainer/#slots","text":"Name Cardinality and Range Description Inheritance data_standardortools_collection 0..* DataStandardOrTool Collection of associated data standards or tools direct","title":"Slots"},{"location":"DataStandardOrToolContainer/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"DataStandardOrToolContainer/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"DataStandardOrToolContainer/#mappings","text":"Mapping Type Mapped Value self https://w3id.org/bridge2ai/standards-schema-all/:DataStandardOrToolContainer native https://w3id.org/bridge2ai/standards-schema-all/:DataStandardOrToolContainer","title":"Mappings"},{"location":"DataStandardOrToolContainer/#linkml-source","text":"","title":"LinkML Source"},{"location":"DataStandardOrToolContainer/#direct","text":"name: DataStandardOrToolContainer description: A container for DataStandardOrTool(s). from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slots: - data_standardortools_collection","title":"Direct"},{"location":"DataStandardOrToolContainer/#induced","text":"name: DataStandardOrToolContainer description: A container for DataStandardOrTool(s). from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 attributes: data_standardortools_collection: name: data_standardortools_collection description: Collection of associated data standards or tools from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 multivalued: true alias: data_standardortools_collection owner: DataStandardOrToolContainer domain_of: - DataStandardOrToolContainer range: DataStandardOrTool inlined: true inlined_as_list: true","title":"Induced"},{"location":"DataSubstrate/","text":"Class: DataSubstrate Represents a data substrate for Bridge2AI data. This may be a high-level data structure or a specific implementation of that structure. Interpret as \"data, in this form or format\", as compared to DataStandard, which refers to the set of rules defining a standard. For example, data in TSV format is represented as a DataSubstrate but the concept of TSV format is a DataStandard. URI: https://w3id.org/bridge2ai/standards-schema-all/:DataSubstrate classDiagram class DataSubstrate NamedThing <|-- DataSubstrate DataSubstrate : category DataSubstrate : contribution_date DataSubstrate : contributor_github_name DataSubstrate : contributor_name DataSubstrate : contributor_orcid DataSubstrate : description DataSubstrate : edam_id DataSubstrate : file_extensions DataSubstrate : id DataSubstrate : limitations DataSubstrate : mesh_id DataSubstrate : metadata_storage DataSubstrate : name DataSubstrate : ncit_id DataSubstrate : related_to DataSubstrate ..> NamedThing : related_to DataSubstrate : subclass_of DataSubstrate ..> NamedThing : subclass_of Inheritance NamedThing DataSubstrate Slots Name Cardinality and Range Description Inheritance edam_id 0..1 EdamIdentifier Unique EDAM identifier direct mesh_id 0..1 MeshIdentifier Unique MeSH identifier direct ncit_id 0..1 NcitIdentifier Unique NCIt Identifier direct metadata_storage 0..* String Data Substrate in which metadata is stored direct file_extensions 0..* String Commonly used file extensions for this substrate direct limitations 0..* String Potential obstacles particular to this substrate or implementation direct id 1..1 Uriorcurie A unique identifier for a thing NamedThing category 0..1 CategoryType Name of the high level ontology class in which this entity is categorized NamedThing name 0..1 String A human-readable name for a thing NamedThing description 0..1 String A human-readable description for a thing NamedThing subclass_of 0..* NamedThing Holds between two classes where the domain class is a specialization of the r... NamedThing related_to 0..* NamedThing A relationship that is asserted between two named things NamedThing contributor_name 0..1 String The name of the person who added this node NamedThing contributor_github_name 0..1 String The name of the github user who added this node NamedThing contributor_orcid 0..1 Uriorcurie The ORCiD of the person who added this node NamedThing contribution_date 0..1 Date The date on which the node was added NamedThing Usages used by used in type used UseCase data_substrates range DataSubstrate DataSubstrateContainer data_substrates_collection range DataSubstrate Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all Mappings Mapping Type Mapped Value self https://w3id.org/bridge2ai/standards-schema-all/:DataSubstrate native https://w3id.org/bridge2ai/standards-schema-all/:DataSubstrate LinkML Source Direct name: DataSubstrate description: Represents a data substrate for Bridge2AI data. This may be a high-level data structure or a specific implementation of that structure. Interpret as \"data, in this form or format\", as compared to DataStandard, which refers to the set of rules defining a standard. For example, data in TSV format is represented as a DataSubstrate but the concept of TSV format is a DataStandard. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: NamedThing slots: - edam_id - mesh_id - ncit_id - metadata_storage - file_extensions - limitations Induced name: DataSubstrate description: Represents a data substrate for Bridge2AI data. This may be a high-level data structure or a specific implementation of that structure. Interpret as \"data, in this form or format\", as compared to DataStandard, which refers to the set of rules defining a standard. For example, data in TSV format is represented as a DataSubstrate but the concept of TSV format is a DataStandard. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: NamedThing attributes: edam_id: name: edam_id description: Unique EDAM identifier examples: - value: edam.data:0006 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 values_from: - edam.data - edam.format - edam.operation - edam.topic alias: edam_id owner: DataSubstrate domain_of: - DataTopic - DataSubstrate range: edam_identifier mesh_id: name: mesh_id description: Unique MeSH identifier examples: - value: MeSH:D014831 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 values_from: - MeSH alias: mesh_id owner: DataSubstrate domain_of: - DataTopic - DataSubstrate range: mesh_identifier ncit_id: name: ncit_id description: Unique NCIt Identifier examples: - value: NCIT:C92692 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 values_from: - NCIT alias: ncit_id owner: DataSubstrate domain_of: - DataTopic - DataSubstrate range: ncit_identifier metadata_storage: name: metadata_storage description: Data Substrate in which metadata is stored. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing multivalued: true alias: metadata_storage owner: DataSubstrate domain_of: - DataSubstrate range: string any_of: - range: DataSubstrate - equals_string: file headers file_extensions: name: file_extensions description: Commonly used file extensions for this substrate. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing multivalued: true alias: file_extensions owner: DataSubstrate domain_of: - DataSubstrate range: string limitations: name: limitations description: 'Potential obstacles particular to this substrate or implementation. ' from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing multivalued: true alias: limitations owner: DataSubstrate domain_of: - DataSubstrate range: string id: name: id description: A unique identifier for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:identifier identifier: true alias: id owner: DataSubstrate domain_of: - NamedThing range: uriorcurie required: true category: name: category description: Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\". from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: type domain: NamedThing designates_type: true alias: category owner: DataSubstrate domain_of: - NamedThing range: category_type name: name: name description: A human-readable name for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:name alias: name owner: DataSubstrate domain_of: - NamedThing range: string description: name: description description: A human-readable description for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:description alias: description owner: DataSubstrate domain_of: - NamedThing range: string subclass_of: name: subclass_of description: Holds between two classes where the domain class is a specialization of the range class. from_schema: https://w3id.org/bridge2ai/standards-schema-all exact_mappings: - rdfs:subClassOf - MESH:isa narrow_mappings: - rdfs:subPropertyOf rank: 1000 is_a: related_to domain: NamedThing multivalued: true inherited: true alias: subclass_of owner: DataSubstrate domain_of: - NamedThing range: NamedThing related_to: name: related_to description: A relationship that is asserted between two named things. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 domain: NamedThing multivalued: true inherited: true alias: related_to owner: DataSubstrate domain_of: - NamedThing - Organization symmetric: true range: NamedThing contributor_name: name: contributor_name description: The name of the person who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_name owner: DataSubstrate domain_of: - NamedThing range: string contributor_github_name: name: contributor_github_name description: The name of the github user who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_github_name owner: DataSubstrate domain_of: - NamedThing range: string contributor_orcid: name: contributor_orcid description: The ORCiD of the person who added this node. examples: - value: ORCID:0000-0001-1234-5678 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_orcid owner: DataSubstrate domain_of: - NamedThing range: uriorcurie contribution_date: name: contribution_date description: The date on which the node was added. examples: - value: '2023-03-20' from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contribution_date owner: DataSubstrate domain_of: - NamedThing range: date","title":"Class: DataSubstrate"},{"location":"DataSubstrate/#class-datasubstrate","text":"Represents a data substrate for Bridge2AI data. This may be a high-level data structure or a specific implementation of that structure. Interpret as \"data, in this form or format\", as compared to DataStandard, which refers to the set of rules defining a standard. For example, data in TSV format is represented as a DataSubstrate but the concept of TSV format is a DataStandard. URI: https://w3id.org/bridge2ai/standards-schema-all/:DataSubstrate classDiagram class DataSubstrate NamedThing <|-- DataSubstrate DataSubstrate : category DataSubstrate : contribution_date DataSubstrate : contributor_github_name DataSubstrate : contributor_name DataSubstrate : contributor_orcid DataSubstrate : description DataSubstrate : edam_id DataSubstrate : file_extensions DataSubstrate : id DataSubstrate : limitations DataSubstrate : mesh_id DataSubstrate : metadata_storage DataSubstrate : name DataSubstrate : ncit_id DataSubstrate : related_to DataSubstrate ..> NamedThing : related_to DataSubstrate : subclass_of DataSubstrate ..> NamedThing : subclass_of","title":"Class: DataSubstrate"},{"location":"DataSubstrate/#inheritance","text":"NamedThing DataSubstrate","title":"Inheritance"},{"location":"DataSubstrate/#slots","text":"Name Cardinality and Range Description Inheritance edam_id 0..1 EdamIdentifier Unique EDAM identifier direct mesh_id 0..1 MeshIdentifier Unique MeSH identifier direct ncit_id 0..1 NcitIdentifier Unique NCIt Identifier direct metadata_storage 0..* String Data Substrate in which metadata is stored direct file_extensions 0..* String Commonly used file extensions for this substrate direct limitations 0..* String Potential obstacles particular to this substrate or implementation direct id 1..1 Uriorcurie A unique identifier for a thing NamedThing category 0..1 CategoryType Name of the high level ontology class in which this entity is categorized NamedThing name 0..1 String A human-readable name for a thing NamedThing description 0..1 String A human-readable description for a thing NamedThing subclass_of 0..* NamedThing Holds between two classes where the domain class is a specialization of the r... NamedThing related_to 0..* NamedThing A relationship that is asserted between two named things NamedThing contributor_name 0..1 String The name of the person who added this node NamedThing contributor_github_name 0..1 String The name of the github user who added this node NamedThing contributor_orcid 0..1 Uriorcurie The ORCiD of the person who added this node NamedThing contribution_date 0..1 Date The date on which the node was added NamedThing","title":"Slots"},{"location":"DataSubstrate/#usages","text":"used by used in type used UseCase data_substrates range DataSubstrate DataSubstrateContainer data_substrates_collection range DataSubstrate","title":"Usages"},{"location":"DataSubstrate/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"DataSubstrate/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"DataSubstrate/#mappings","text":"Mapping Type Mapped Value self https://w3id.org/bridge2ai/standards-schema-all/:DataSubstrate native https://w3id.org/bridge2ai/standards-schema-all/:DataSubstrate","title":"Mappings"},{"location":"DataSubstrate/#linkml-source","text":"","title":"LinkML Source"},{"location":"DataSubstrate/#direct","text":"name: DataSubstrate description: Represents a data substrate for Bridge2AI data. This may be a high-level data structure or a specific implementation of that structure. Interpret as \"data, in this form or format\", as compared to DataStandard, which refers to the set of rules defining a standard. For example, data in TSV format is represented as a DataSubstrate but the concept of TSV format is a DataStandard. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: NamedThing slots: - edam_id - mesh_id - ncit_id - metadata_storage - file_extensions - limitations","title":"Direct"},{"location":"DataSubstrate/#induced","text":"name: DataSubstrate description: Represents a data substrate for Bridge2AI data. This may be a high-level data structure or a specific implementation of that structure. Interpret as \"data, in this form or format\", as compared to DataStandard, which refers to the set of rules defining a standard. For example, data in TSV format is represented as a DataSubstrate but the concept of TSV format is a DataStandard. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: NamedThing attributes: edam_id: name: edam_id description: Unique EDAM identifier examples: - value: edam.data:0006 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 values_from: - edam.data - edam.format - edam.operation - edam.topic alias: edam_id owner: DataSubstrate domain_of: - DataTopic - DataSubstrate range: edam_identifier mesh_id: name: mesh_id description: Unique MeSH identifier examples: - value: MeSH:D014831 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 values_from: - MeSH alias: mesh_id owner: DataSubstrate domain_of: - DataTopic - DataSubstrate range: mesh_identifier ncit_id: name: ncit_id description: Unique NCIt Identifier examples: - value: NCIT:C92692 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 values_from: - NCIT alias: ncit_id owner: DataSubstrate domain_of: - DataTopic - DataSubstrate range: ncit_identifier metadata_storage: name: metadata_storage description: Data Substrate in which metadata is stored. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing multivalued: true alias: metadata_storage owner: DataSubstrate domain_of: - DataSubstrate range: string any_of: - range: DataSubstrate - equals_string: file headers file_extensions: name: file_extensions description: Commonly used file extensions for this substrate. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing multivalued: true alias: file_extensions owner: DataSubstrate domain_of: - DataSubstrate range: string limitations: name: limitations description: 'Potential obstacles particular to this substrate or implementation. ' from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing multivalued: true alias: limitations owner: DataSubstrate domain_of: - DataSubstrate range: string id: name: id description: A unique identifier for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:identifier identifier: true alias: id owner: DataSubstrate domain_of: - NamedThing range: uriorcurie required: true category: name: category description: Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\". from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: type domain: NamedThing designates_type: true alias: category owner: DataSubstrate domain_of: - NamedThing range: category_type name: name: name description: A human-readable name for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:name alias: name owner: DataSubstrate domain_of: - NamedThing range: string description: name: description description: A human-readable description for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:description alias: description owner: DataSubstrate domain_of: - NamedThing range: string subclass_of: name: subclass_of description: Holds between two classes where the domain class is a specialization of the range class. from_schema: https://w3id.org/bridge2ai/standards-schema-all exact_mappings: - rdfs:subClassOf - MESH:isa narrow_mappings: - rdfs:subPropertyOf rank: 1000 is_a: related_to domain: NamedThing multivalued: true inherited: true alias: subclass_of owner: DataSubstrate domain_of: - NamedThing range: NamedThing related_to: name: related_to description: A relationship that is asserted between two named things. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 domain: NamedThing multivalued: true inherited: true alias: related_to owner: DataSubstrate domain_of: - NamedThing - Organization symmetric: true range: NamedThing contributor_name: name: contributor_name description: The name of the person who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_name owner: DataSubstrate domain_of: - NamedThing range: string contributor_github_name: name: contributor_github_name description: The name of the github user who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_github_name owner: DataSubstrate domain_of: - NamedThing range: string contributor_orcid: name: contributor_orcid description: The ORCiD of the person who added this node. examples: - value: ORCID:0000-0001-1234-5678 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_orcid owner: DataSubstrate domain_of: - NamedThing range: uriorcurie contribution_date: name: contribution_date description: The date on which the node was added. examples: - value: '2023-03-20' from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contribution_date owner: DataSubstrate domain_of: - NamedThing range: date","title":"Induced"},{"location":"DataSubstrateContainer/","text":"Class: DataSubstrateContainer A container for DataSubstrates. URI: https://w3id.org/bridge2ai/standards-schema-all/:DataSubstrateContainer classDiagram class DataSubstrateContainer DataSubstrateContainer : data_substrates_collection DataSubstrateContainer ..> DataSubstrate : data_substrates_collection Slots Name Cardinality and Range Description Inheritance data_substrates_collection 0..* DataSubstrate Collection of associated data substrates direct Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all Mappings Mapping Type Mapped Value self https://w3id.org/bridge2ai/standards-schema-all/:DataSubstrateContainer native https://w3id.org/bridge2ai/standards-schema-all/:DataSubstrateContainer LinkML Source Direct name: DataSubstrateContainer description: A container for DataSubstrates. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slots: - data_substrates_collection Induced name: DataSubstrateContainer description: A container for DataSubstrates. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 attributes: data_substrates_collection: name: data_substrates_collection description: Collection of associated data substrates from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 multivalued: true alias: data_substrates_collection owner: DataSubstrateContainer domain_of: - DataSubstrateContainer range: DataSubstrate inlined: true inlined_as_list: true","title":"Class: DataSubstrateContainer"},{"location":"DataSubstrateContainer/#class-datasubstratecontainer","text":"A container for DataSubstrates. URI: https://w3id.org/bridge2ai/standards-schema-all/:DataSubstrateContainer classDiagram class DataSubstrateContainer DataSubstrateContainer : data_substrates_collection DataSubstrateContainer ..> DataSubstrate : data_substrates_collection","title":"Class: DataSubstrateContainer"},{"location":"DataSubstrateContainer/#slots","text":"Name Cardinality and Range Description Inheritance data_substrates_collection 0..* DataSubstrate Collection of associated data substrates direct","title":"Slots"},{"location":"DataSubstrateContainer/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"DataSubstrateContainer/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"DataSubstrateContainer/#mappings","text":"Mapping Type Mapped Value self https://w3id.org/bridge2ai/standards-schema-all/:DataSubstrateContainer native https://w3id.org/bridge2ai/standards-schema-all/:DataSubstrateContainer","title":"Mappings"},{"location":"DataSubstrateContainer/#linkml-source","text":"","title":"LinkML Source"},{"location":"DataSubstrateContainer/#direct","text":"name: DataSubstrateContainer description: A container for DataSubstrates. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slots: - data_substrates_collection","title":"Direct"},{"location":"DataSubstrateContainer/#induced","text":"name: DataSubstrateContainer description: A container for DataSubstrates. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 attributes: data_substrates_collection: name: data_substrates_collection description: Collection of associated data substrates from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 multivalued: true alias: data_substrates_collection owner: DataSubstrateContainer domain_of: - DataSubstrateContainer range: DataSubstrate inlined: true inlined_as_list: true","title":"Induced"},{"location":"DataTopic/","text":"Class: DataTopic Represents a general data topic for Bridge2AI data or the tools/standards applied to the data. URI: https://w3id.org/bridge2ai/standards-schema-all/:DataTopic classDiagram class DataTopic NamedThing <|-- DataTopic DataTopic : category DataTopic : contribution_date DataTopic : contributor_github_name DataTopic : contributor_name DataTopic : contributor_orcid DataTopic : description DataTopic : edam_id DataTopic : id DataTopic : mesh_id DataTopic : name DataTopic : ncit_id DataTopic : related_to DataTopic ..> NamedThing : related_to DataTopic : subclass_of DataTopic ..> NamedThing : subclass_of DataTopic : topic_involves_anatomy DataTopic ..> AnatomicalEntity : topic_involves_anatomy Inheritance NamedThing DataTopic Slots Name Cardinality and Range Description Inheritance edam_id 0..1 EdamIdentifier Unique EDAM identifier direct mesh_id 0..1 MeshIdentifier Unique MeSH identifier direct ncit_id 0..1 NcitIdentifier Unique NCIt Identifier direct topic_involves_anatomy 0..* AnatomicalEntity A relationship between a DataTopic and an anatomical entity direct id 1..1 Uriorcurie A unique identifier for a thing NamedThing category 0..1 CategoryType Name of the high level ontology class in which this entity is categorized NamedThing name 0..1 String A human-readable name for a thing NamedThing description 0..1 String A human-readable description for a thing NamedThing subclass_of 0..* NamedThing Holds between two classes where the domain class is a specialization of the r... NamedThing related_to 0..* NamedThing A relationship that is asserted between two named things NamedThing contributor_name 0..1 String The name of the person who added this node NamedThing contributor_github_name 0..1 String The name of the github user who added this node NamedThing contributor_orcid 0..1 Uriorcurie The ORCiD of the person who added this node NamedThing contribution_date 0..1 Date The date on which the node was added NamedThing Usages used by used in type used UseCase data_topics range DataTopic DataStandardOrTool concerns_data_topic range DataTopic DataStandard concerns_data_topic range DataTopic BiomedicalStandard concerns_data_topic range DataTopic Registry concerns_data_topic range DataTopic OntologyOrVocabulary concerns_data_topic range DataTopic ModelRepository concerns_data_topic range DataTopic ReferenceDataOrDataset concerns_data_topic range DataTopic SoftwareOrTool concerns_data_topic range DataTopic ReferenceImplementation concerns_data_topic range DataTopic TrainingProgram concerns_data_topic range DataTopic DataTopic topic_involves_anatomy domain DataTopic DataTopicContainer data_topics_collection range DataTopic Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all Mappings Mapping Type Mapped Value self https://w3id.org/bridge2ai/standards-schema-all/:DataTopic native https://w3id.org/bridge2ai/standards-schema-all/:DataTopic LinkML Source Direct name: DataTopic description: Represents a general data topic for Bridge2AI data or the tools/standards applied to the data. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: NamedThing slots: - edam_id - mesh_id - ncit_id - topic_involves_anatomy Induced name: DataTopic description: Represents a general data topic for Bridge2AI data or the tools/standards applied to the data. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: NamedThing attributes: edam_id: name: edam_id description: Unique EDAM identifier examples: - value: edam.data:0006 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 values_from: - edam.data - edam.format - edam.operation - edam.topic alias: edam_id owner: DataTopic domain_of: - DataTopic - DataSubstrate range: edam_identifier mesh_id: name: mesh_id description: Unique MeSH identifier examples: - value: MeSH:D014831 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 values_from: - MeSH alias: mesh_id owner: DataTopic domain_of: - DataTopic - DataSubstrate range: mesh_identifier ncit_id: name: ncit_id description: Unique NCIt Identifier examples: - value: NCIT:C92692 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 values_from: - NCIT alias: ncit_id owner: DataTopic domain_of: - DataTopic - DataSubstrate range: ncit_identifier topic_involves_anatomy: name: topic_involves_anatomy description: A relationship between a DataTopic and an anatomical entity. from_schema: https://w3id.org/bridge2ai/standards-schema-all exact_mappings: - RO:0004026 rank: 1000 is_a: related_to domain: DataTopic multivalued: true inherited: true alias: topic_involves_anatomy owner: DataTopic domain_of: - DataTopic range: AnatomicalEntity id: name: id description: A unique identifier for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:identifier identifier: true alias: id owner: DataTopic domain_of: - NamedThing range: uriorcurie required: true category: name: category description: Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\". from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: type domain: NamedThing designates_type: true alias: category owner: DataTopic domain_of: - NamedThing range: category_type name: name: name description: A human-readable name for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:name alias: name owner: DataTopic domain_of: - NamedThing range: string description: name: description description: A human-readable description for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:description alias: description owner: DataTopic domain_of: - NamedThing range: string subclass_of: name: subclass_of description: Holds between two classes where the domain class is a specialization of the range class. from_schema: https://w3id.org/bridge2ai/standards-schema-all exact_mappings: - rdfs:subClassOf - MESH:isa narrow_mappings: - rdfs:subPropertyOf rank: 1000 is_a: related_to domain: NamedThing multivalued: true inherited: true alias: subclass_of owner: DataTopic domain_of: - NamedThing range: NamedThing related_to: name: related_to description: A relationship that is asserted between two named things. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 domain: NamedThing multivalued: true inherited: true alias: related_to owner: DataTopic domain_of: - NamedThing - Organization symmetric: true range: NamedThing contributor_name: name: contributor_name description: The name of the person who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_name owner: DataTopic domain_of: - NamedThing range: string contributor_github_name: name: contributor_github_name description: The name of the github user who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_github_name owner: DataTopic domain_of: - NamedThing range: string contributor_orcid: name: contributor_orcid description: The ORCiD of the person who added this node. examples: - value: ORCID:0000-0001-1234-5678 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_orcid owner: DataTopic domain_of: - NamedThing range: uriorcurie contribution_date: name: contribution_date description: The date on which the node was added. examples: - value: '2023-03-20' from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contribution_date owner: DataTopic domain_of: - NamedThing range: date","title":"Class: DataTopic"},{"location":"DataTopic/#class-datatopic","text":"Represents a general data topic for Bridge2AI data or the tools/standards applied to the data. URI: https://w3id.org/bridge2ai/standards-schema-all/:DataTopic classDiagram class DataTopic NamedThing <|-- DataTopic DataTopic : category DataTopic : contribution_date DataTopic : contributor_github_name DataTopic : contributor_name DataTopic : contributor_orcid DataTopic : description DataTopic : edam_id DataTopic : id DataTopic : mesh_id DataTopic : name DataTopic : ncit_id DataTopic : related_to DataTopic ..> NamedThing : related_to DataTopic : subclass_of DataTopic ..> NamedThing : subclass_of DataTopic : topic_involves_anatomy DataTopic ..> AnatomicalEntity : topic_involves_anatomy","title":"Class: DataTopic"},{"location":"DataTopic/#inheritance","text":"NamedThing DataTopic","title":"Inheritance"},{"location":"DataTopic/#slots","text":"Name Cardinality and Range Description Inheritance edam_id 0..1 EdamIdentifier Unique EDAM identifier direct mesh_id 0..1 MeshIdentifier Unique MeSH identifier direct ncit_id 0..1 NcitIdentifier Unique NCIt Identifier direct topic_involves_anatomy 0..* AnatomicalEntity A relationship between a DataTopic and an anatomical entity direct id 1..1 Uriorcurie A unique identifier for a thing NamedThing category 0..1 CategoryType Name of the high level ontology class in which this entity is categorized NamedThing name 0..1 String A human-readable name for a thing NamedThing description 0..1 String A human-readable description for a thing NamedThing subclass_of 0..* NamedThing Holds between two classes where the domain class is a specialization of the r... NamedThing related_to 0..* NamedThing A relationship that is asserted between two named things NamedThing contributor_name 0..1 String The name of the person who added this node NamedThing contributor_github_name 0..1 String The name of the github user who added this node NamedThing contributor_orcid 0..1 Uriorcurie The ORCiD of the person who added this node NamedThing contribution_date 0..1 Date The date on which the node was added NamedThing","title":"Slots"},{"location":"DataTopic/#usages","text":"used by used in type used UseCase data_topics range DataTopic DataStandardOrTool concerns_data_topic range DataTopic DataStandard concerns_data_topic range DataTopic BiomedicalStandard concerns_data_topic range DataTopic Registry concerns_data_topic range DataTopic OntologyOrVocabulary concerns_data_topic range DataTopic ModelRepository concerns_data_topic range DataTopic ReferenceDataOrDataset concerns_data_topic range DataTopic SoftwareOrTool concerns_data_topic range DataTopic ReferenceImplementation concerns_data_topic range DataTopic TrainingProgram concerns_data_topic range DataTopic DataTopic topic_involves_anatomy domain DataTopic DataTopicContainer data_topics_collection range DataTopic","title":"Usages"},{"location":"DataTopic/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"DataTopic/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"DataTopic/#mappings","text":"Mapping Type Mapped Value self https://w3id.org/bridge2ai/standards-schema-all/:DataTopic native https://w3id.org/bridge2ai/standards-schema-all/:DataTopic","title":"Mappings"},{"location":"DataTopic/#linkml-source","text":"","title":"LinkML Source"},{"location":"DataTopic/#direct","text":"name: DataTopic description: Represents a general data topic for Bridge2AI data or the tools/standards applied to the data. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: NamedThing slots: - edam_id - mesh_id - ncit_id - topic_involves_anatomy","title":"Direct"},{"location":"DataTopic/#induced","text":"name: DataTopic description: Represents a general data topic for Bridge2AI data or the tools/standards applied to the data. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: NamedThing attributes: edam_id: name: edam_id description: Unique EDAM identifier examples: - value: edam.data:0006 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 values_from: - edam.data - edam.format - edam.operation - edam.topic alias: edam_id owner: DataTopic domain_of: - DataTopic - DataSubstrate range: edam_identifier mesh_id: name: mesh_id description: Unique MeSH identifier examples: - value: MeSH:D014831 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 values_from: - MeSH alias: mesh_id owner: DataTopic domain_of: - DataTopic - DataSubstrate range: mesh_identifier ncit_id: name: ncit_id description: Unique NCIt Identifier examples: - value: NCIT:C92692 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 values_from: - NCIT alias: ncit_id owner: DataTopic domain_of: - DataTopic - DataSubstrate range: ncit_identifier topic_involves_anatomy: name: topic_involves_anatomy description: A relationship between a DataTopic and an anatomical entity. from_schema: https://w3id.org/bridge2ai/standards-schema-all exact_mappings: - RO:0004026 rank: 1000 is_a: related_to domain: DataTopic multivalued: true inherited: true alias: topic_involves_anatomy owner: DataTopic domain_of: - DataTopic range: AnatomicalEntity id: name: id description: A unique identifier for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:identifier identifier: true alias: id owner: DataTopic domain_of: - NamedThing range: uriorcurie required: true category: name: category description: Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\". from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: type domain: NamedThing designates_type: true alias: category owner: DataTopic domain_of: - NamedThing range: category_type name: name: name description: A human-readable name for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:name alias: name owner: DataTopic domain_of: - NamedThing range: string description: name: description description: A human-readable description for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:description alias: description owner: DataTopic domain_of: - NamedThing range: string subclass_of: name: subclass_of description: Holds between two classes where the domain class is a specialization of the range class. from_schema: https://w3id.org/bridge2ai/standards-schema-all exact_mappings: - rdfs:subClassOf - MESH:isa narrow_mappings: - rdfs:subPropertyOf rank: 1000 is_a: related_to domain: NamedThing multivalued: true inherited: true alias: subclass_of owner: DataTopic domain_of: - NamedThing range: NamedThing related_to: name: related_to description: A relationship that is asserted between two named things. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 domain: NamedThing multivalued: true inherited: true alias: related_to owner: DataTopic domain_of: - NamedThing - Organization symmetric: true range: NamedThing contributor_name: name: contributor_name description: The name of the person who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_name owner: DataTopic domain_of: - NamedThing range: string contributor_github_name: name: contributor_github_name description: The name of the github user who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_github_name owner: DataTopic domain_of: - NamedThing range: string contributor_orcid: name: contributor_orcid description: The ORCiD of the person who added this node. examples: - value: ORCID:0000-0001-1234-5678 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_orcid owner: DataTopic domain_of: - NamedThing range: uriorcurie contribution_date: name: contribution_date description: The date on which the node was added. examples: - value: '2023-03-20' from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contribution_date owner: DataTopic domain_of: - NamedThing range: date","title":"Induced"},{"location":"DataTopicContainer/","text":"Class: DataTopicContainer A container for DataTopics. URI: https://w3id.org/bridge2ai/standards-schema-all/:DataTopicContainer classDiagram class DataTopicContainer DataTopicContainer : data_topics_collection DataTopicContainer ..> DataTopic : data_topics_collection Slots Name Cardinality and Range Description Inheritance data_topics_collection 0..* DataTopic Collection of associated data topics direct Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all Mappings Mapping Type Mapped Value self https://w3id.org/bridge2ai/standards-schema-all/:DataTopicContainer native https://w3id.org/bridge2ai/standards-schema-all/:DataTopicContainer LinkML Source Direct name: DataTopicContainer description: A container for DataTopics. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slots: - data_topics_collection Induced name: DataTopicContainer description: A container for DataTopics. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 attributes: data_topics_collection: name: data_topics_collection description: Collection of associated data topics. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 multivalued: true alias: data_topics_collection owner: DataTopicContainer domain_of: - DataTopicContainer range: DataTopic inlined: true inlined_as_list: true","title":"Class: DataTopicContainer"},{"location":"DataTopicContainer/#class-datatopiccontainer","text":"A container for DataTopics. URI: https://w3id.org/bridge2ai/standards-schema-all/:DataTopicContainer classDiagram class DataTopicContainer DataTopicContainer : data_topics_collection DataTopicContainer ..> DataTopic : data_topics_collection","title":"Class: DataTopicContainer"},{"location":"DataTopicContainer/#slots","text":"Name Cardinality and Range Description Inheritance data_topics_collection 0..* DataTopic Collection of associated data topics direct","title":"Slots"},{"location":"DataTopicContainer/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"DataTopicContainer/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"DataTopicContainer/#mappings","text":"Mapping Type Mapped Value self https://w3id.org/bridge2ai/standards-schema-all/:DataTopicContainer native https://w3id.org/bridge2ai/standards-schema-all/:DataTopicContainer","title":"Mappings"},{"location":"DataTopicContainer/#linkml-source","text":"","title":"LinkML Source"},{"location":"DataTopicContainer/#direct","text":"name: DataTopicContainer description: A container for DataTopics. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slots: - data_topics_collection","title":"Direct"},{"location":"DataTopicContainer/#induced","text":"name: DataTopicContainer description: A container for DataTopics. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 attributes: data_topics_collection: name: data_topics_collection description: Collection of associated data topics. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 multivalued: true alias: data_topics_collection owner: DataTopicContainer domain_of: - DataTopicContainer range: DataTopic inlined: true inlined_as_list: true","title":"Induced"},{"location":"Date/","text":"Type: Date a date (year, month and day) in an idealized calendar URI: xsd:date base : XSDDate uri : xsd:date repr : str Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Type: Date"},{"location":"Date/#type-date","text":"a date (year, month and day) in an idealized calendar URI: xsd:date base : XSDDate uri : xsd:date repr : str","title":"Type: Date"},{"location":"Date/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Date/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"DateOrDatetime/","text":"Type: DateOrDatetime Either a date or a datetime URI: linkml:DateOrDatetime base : str uri : linkml:DateOrDatetime repr : str Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Type: DateOrDatetime"},{"location":"DateOrDatetime/#type-dateordatetime","text":"Either a date or a datetime URI: linkml:DateOrDatetime base : str uri : linkml:DateOrDatetime repr : str","title":"Type: DateOrDatetime"},{"location":"DateOrDatetime/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"DateOrDatetime/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"Datetime/","text":"Type: Datetime The combination of a date and time URI: xsd:dateTime base : XSDDateTime uri : xsd:dateTime repr : str Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Type: Datetime"},{"location":"Datetime/#type-datetime","text":"The combination of a date and time URI: xsd:dateTime base : XSDDateTime uri : xsd:dateTime repr : str","title":"Type: Datetime"},{"location":"Datetime/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Datetime/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"Decimal/","text":"Type: Decimal A real number with arbitrary precision that conforms to the xsd:decimal specification URI: xsd:decimal base : Decimal uri : xsd:decimal Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Type: Decimal"},{"location":"Decimal/#type-decimal","text":"A real number with arbitrary precision that conforms to the xsd:decimal specification URI: xsd:decimal base : Decimal uri : xsd:decimal","title":"Type: Decimal"},{"location":"Decimal/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Decimal/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"Double/","text":"Type: Double A real number that conforms to the xsd:double specification URI: xsd:double base : float uri : xsd:double Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Type: Double"},{"location":"Double/#type-double","text":"A real number that conforms to the xsd:double specification URI: xsd:double base : float uri : xsd:double","title":"Type: Double"},{"location":"Double/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Double/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"EdamIdentifier/","text":"Type: EdamIdentifier Identifier from EDAM ontology URI: xsd:anyURI base : URIorCURIE uri : xsd:anyURI repr : str typeof : uriorcurie Identifier and Mapping Information Valid ID Prefixes Instances of this class should have identifiers with one of the following prefixes: edam.data edam.format edam.operation edam.topic Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Type: EdamIdentifier"},{"location":"EdamIdentifier/#type-edamidentifier","text":"Identifier from EDAM ontology URI: xsd:anyURI base : URIorCURIE uri : xsd:anyURI repr : str typeof : uriorcurie","title":"Type: EdamIdentifier"},{"location":"EdamIdentifier/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"EdamIdentifier/#valid-id-prefixes","text":"Instances of this class should have identifiers with one of the following prefixes: edam.data edam.format edam.operation edam.topic","title":"Valid ID Prefixes"},{"location":"EdamIdentifier/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"Float/","text":"Type: Float A real number that conforms to the xsd:float specification URI: xsd:float base : float uri : xsd:float Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Type: Float"},{"location":"Float/#type-float","text":"A real number that conforms to the xsd:float specification URI: xsd:float base : float uri : xsd:float","title":"Type: Float"},{"location":"Float/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Float/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"Integer/","text":"Type: Integer An integer URI: xsd:integer base : int uri : xsd:integer Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Type: Integer"},{"location":"Integer/#type-integer","text":"An integer URI: xsd:integer base : int uri : xsd:integer","title":"Type: Integer"},{"location":"Integer/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Integer/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"MeshIdentifier/","text":"Type: MeshIdentifier Identifier from Medical Subject Headings (MeSH) biomedical vocabulary. URI: xsd:anyURI base : URIorCURIE uri : xsd:anyURI repr : str typeof : uriorcurie Identifier and Mapping Information Valid ID Prefixes Instances of this class should have identifiers with one of the following prefixes: mesh Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Type: MeshIdentifier"},{"location":"MeshIdentifier/#type-meshidentifier","text":"Identifier from Medical Subject Headings (MeSH) biomedical vocabulary. URI: xsd:anyURI base : URIorCURIE uri : xsd:anyURI repr : str typeof : uriorcurie","title":"Type: MeshIdentifier"},{"location":"MeshIdentifier/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"MeshIdentifier/#valid-id-prefixes","text":"Instances of this class should have identifiers with one of the following prefixes: mesh","title":"Valid ID Prefixes"},{"location":"MeshIdentifier/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"ModelRepository/","text":"Class: ModelRepository Represents a resource in the Bridge2AI Standards Registry serving to curate and store computational models. To be a respository, the resource must not index models alone. URI: https://w3id.org/bridge2ai/standards-schema-all/:ModelRepository classDiagram class ModelRepository DataStandardOrTool <|-- ModelRepository ModelRepository : category ModelRepository : collection ModelRepository ..> StandardsCollectionTag : collection ModelRepository : concerns_data_topic ModelRepository ..> DataTopic : concerns_data_topic ModelRepository : contribution_date ModelRepository : contributor_github_name ModelRepository : contributor_name ModelRepository : contributor_orcid ModelRepository : description ModelRepository : formal_specification ModelRepository : has_relevant_organization ModelRepository ..> Organization : has_relevant_organization ModelRepository : id ModelRepository : is_open ModelRepository : name ModelRepository : not_relevant_to_dgps ModelRepository : publication ModelRepository : purpose_detail ModelRepository : related_to ModelRepository ..> NamedThing : related_to ModelRepository : requires_registration ModelRepository : subclass_of ModelRepository ..> NamedThing : subclass_of ModelRepository : url Inheritance NamedThing DataStandardOrTool ModelRepository Slots Name Cardinality and Range Description Inheritance collection 0..* StandardsCollectionTag Tags for specific sets of standards DataStandardOrTool concerns_data_topic 0..* DataTopic Subject standard is generally applied in the context of object data topic DataStandardOrTool has_relevant_organization 0..* Organization Subject standard is managed or otherwise guided buy the object organization(s... DataStandardOrTool purpose_detail 0..1 String Text description of the standard or tool DataStandardOrTool is_open 0..1 Boolean Is the standard or tool FAIR and available free of cost? DataStandardOrTool requires_registration 0..1 Boolean Does usage of the standard or tool require registrion of a user or group with... DataStandardOrTool url 0..1 Uriorcurie URL for basic documentation of the standard or tool DataStandardOrTool publication 0..1 Uriorcurie Relevant publication for the standard or tool DataStandardOrTool formal_specification 0..1 Uriorcurie Relevant code repository or other location for a formal specification of the ... DataStandardOrTool not_relevant_to_dgps 0..1 Boolean Is the standard or tool currently relevant to DGPs? DataStandardOrTool id 1..1 Uriorcurie A unique identifier for a thing NamedThing category 0..1 CategoryType Name of the high level ontology class in which this entity is categorized NamedThing name 0..1 String A human-readable name for a thing NamedThing description 0..1 String A human-readable description for a thing NamedThing subclass_of 0..* NamedThing Holds between two classes where the domain class is a specialization of the r... NamedThing related_to 0..* NamedThing A relationship that is asserted between two named things NamedThing contributor_name 0..1 String The name of the person who added this node NamedThing contributor_github_name 0..1 String The name of the github user who added this node NamedThing contributor_orcid 0..1 Uriorcurie The ORCiD of the person who added this node NamedThing contribution_date 0..1 Date The date on which the node was added NamedThing Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all Mappings Mapping Type Mapped Value self https://w3id.org/bridge2ai/standards-schema-all/:ModelRepository native https://w3id.org/bridge2ai/standards-schema-all/:ModelRepository LinkML Source Direct name: ModelRepository description: Represents a resource in the Bridge2AI Standards Registry serving to curate and store computational models. To be a respository, the resource must not index models alone. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: DataStandardOrTool Induced name: ModelRepository description: Represents a resource in the Bridge2AI Standards Registry serving to curate and store computational models. To be a respository, the resource must not index models alone. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: DataStandardOrTool attributes: collection: name: collection description: Tags for specific sets of standards. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing multivalued: true alias: collection owner: ModelRepository domain_of: - DataStandardOrTool range: StandardsCollectionTag concerns_data_topic: name: concerns_data_topic description: Subject standard is generally applied in the context of object data topic. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: related_to domain: DataStandardOrTool multivalued: true inherited: true alias: concerns_data_topic owner: ModelRepository domain_of: - DataStandardOrTool range: DataTopic has_relevant_organization: name: has_relevant_organization description: Subject standard is managed or otherwise guided buy the object organization(s). from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: related_to domain: DataStandardOrTool multivalued: true inherited: true alias: has_relevant_organization owner: ModelRepository domain_of: - DataStandardOrTool range: Organization purpose_detail: name: purpose_detail description: Text description of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: purpose_detail owner: ModelRepository domain_of: - DataStandardOrTool range: string is_open: name: is_open description: Is the standard or tool FAIR and available free of cost? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: is_open owner: ModelRepository domain_of: - DataStandardOrTool range: boolean requires_registration: name: requires_registration description: Does usage of the standard or tool require registrion of a user or group with some organization or managerial body? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: requires_registration owner: ModelRepository domain_of: - DataStandardOrTool range: boolean url: name: url description: URL for basic documentation of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: url owner: ModelRepository domain_of: - DataStandardOrTool - Organization range: uriorcurie publication: name: publication description: Relevant publication for the standard or tool. Prefer a DOI or PUBMED. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: publication owner: ModelRepository domain_of: - DataStandardOrTool range: uriorcurie formal_specification: name: formal_specification description: Relevant code repository or other location for a formal specification of the standard or tool. Often a URL, particularly to a Git repository. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: formal_specification owner: ModelRepository domain_of: - DataStandardOrTool range: uriorcurie not_relevant_to_dgps: name: not_relevant_to_dgps description: Is the standard or tool currently relevant to DGPs? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: not_relevant_to_dgps owner: ModelRepository domain_of: - DataStandardOrTool range: boolean id: name: id description: A unique identifier for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:identifier identifier: true alias: id owner: ModelRepository domain_of: - NamedThing range: uriorcurie required: true category: name: category description: Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\". from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: type domain: NamedThing designates_type: true alias: category owner: ModelRepository domain_of: - NamedThing range: category_type name: name: name description: A human-readable name for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:name alias: name owner: ModelRepository domain_of: - NamedThing range: string description: name: description description: A human-readable description for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:description alias: description owner: ModelRepository domain_of: - NamedThing range: string subclass_of: name: subclass_of description: Holds between two classes where the domain class is a specialization of the range class. from_schema: https://w3id.org/bridge2ai/standards-schema-all exact_mappings: - rdfs:subClassOf - MESH:isa narrow_mappings: - rdfs:subPropertyOf rank: 1000 is_a: related_to domain: NamedThing multivalued: true inherited: true alias: subclass_of owner: ModelRepository domain_of: - NamedThing range: NamedThing related_to: name: related_to description: A relationship that is asserted between two named things. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 domain: NamedThing multivalued: true inherited: true alias: related_to owner: ModelRepository domain_of: - NamedThing - Organization symmetric: true range: NamedThing contributor_name: name: contributor_name description: The name of the person who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_name owner: ModelRepository domain_of: - NamedThing range: string contributor_github_name: name: contributor_github_name description: The name of the github user who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_github_name owner: ModelRepository domain_of: - NamedThing range: string contributor_orcid: name: contributor_orcid description: The ORCiD of the person who added this node. examples: - value: ORCID:0000-0001-1234-5678 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_orcid owner: ModelRepository domain_of: - NamedThing range: uriorcurie contribution_date: name: contribution_date description: The date on which the node was added. examples: - value: '2023-03-20' from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contribution_date owner: ModelRepository domain_of: - NamedThing range: date","title":"Class: ModelRepository"},{"location":"ModelRepository/#class-modelrepository","text":"Represents a resource in the Bridge2AI Standards Registry serving to curate and store computational models. To be a respository, the resource must not index models alone. URI: https://w3id.org/bridge2ai/standards-schema-all/:ModelRepository classDiagram class ModelRepository DataStandardOrTool <|-- ModelRepository ModelRepository : category ModelRepository : collection ModelRepository ..> StandardsCollectionTag : collection ModelRepository : concerns_data_topic ModelRepository ..> DataTopic : concerns_data_topic ModelRepository : contribution_date ModelRepository : contributor_github_name ModelRepository : contributor_name ModelRepository : contributor_orcid ModelRepository : description ModelRepository : formal_specification ModelRepository : has_relevant_organization ModelRepository ..> Organization : has_relevant_organization ModelRepository : id ModelRepository : is_open ModelRepository : name ModelRepository : not_relevant_to_dgps ModelRepository : publication ModelRepository : purpose_detail ModelRepository : related_to ModelRepository ..> NamedThing : related_to ModelRepository : requires_registration ModelRepository : subclass_of ModelRepository ..> NamedThing : subclass_of ModelRepository : url","title":"Class: ModelRepository"},{"location":"ModelRepository/#inheritance","text":"NamedThing DataStandardOrTool ModelRepository","title":"Inheritance"},{"location":"ModelRepository/#slots","text":"Name Cardinality and Range Description Inheritance collection 0..* StandardsCollectionTag Tags for specific sets of standards DataStandardOrTool concerns_data_topic 0..* DataTopic Subject standard is generally applied in the context of object data topic DataStandardOrTool has_relevant_organization 0..* Organization Subject standard is managed or otherwise guided buy the object organization(s... DataStandardOrTool purpose_detail 0..1 String Text description of the standard or tool DataStandardOrTool is_open 0..1 Boolean Is the standard or tool FAIR and available free of cost? DataStandardOrTool requires_registration 0..1 Boolean Does usage of the standard or tool require registrion of a user or group with... DataStandardOrTool url 0..1 Uriorcurie URL for basic documentation of the standard or tool DataStandardOrTool publication 0..1 Uriorcurie Relevant publication for the standard or tool DataStandardOrTool formal_specification 0..1 Uriorcurie Relevant code repository or other location for a formal specification of the ... DataStandardOrTool not_relevant_to_dgps 0..1 Boolean Is the standard or tool currently relevant to DGPs? DataStandardOrTool id 1..1 Uriorcurie A unique identifier for a thing NamedThing category 0..1 CategoryType Name of the high level ontology class in which this entity is categorized NamedThing name 0..1 String A human-readable name for a thing NamedThing description 0..1 String A human-readable description for a thing NamedThing subclass_of 0..* NamedThing Holds between two classes where the domain class is a specialization of the r... NamedThing related_to 0..* NamedThing A relationship that is asserted between two named things NamedThing contributor_name 0..1 String The name of the person who added this node NamedThing contributor_github_name 0..1 String The name of the github user who added this node NamedThing contributor_orcid 0..1 Uriorcurie The ORCiD of the person who added this node NamedThing contribution_date 0..1 Date The date on which the node was added NamedThing","title":"Slots"},{"location":"ModelRepository/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"ModelRepository/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"ModelRepository/#mappings","text":"Mapping Type Mapped Value self https://w3id.org/bridge2ai/standards-schema-all/:ModelRepository native https://w3id.org/bridge2ai/standards-schema-all/:ModelRepository","title":"Mappings"},{"location":"ModelRepository/#linkml-source","text":"","title":"LinkML Source"},{"location":"ModelRepository/#direct","text":"name: ModelRepository description: Represents a resource in the Bridge2AI Standards Registry serving to curate and store computational models. To be a respository, the resource must not index models alone. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: DataStandardOrTool","title":"Direct"},{"location":"ModelRepository/#induced","text":"name: ModelRepository description: Represents a resource in the Bridge2AI Standards Registry serving to curate and store computational models. To be a respository, the resource must not index models alone. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: DataStandardOrTool attributes: collection: name: collection description: Tags for specific sets of standards. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing multivalued: true alias: collection owner: ModelRepository domain_of: - DataStandardOrTool range: StandardsCollectionTag concerns_data_topic: name: concerns_data_topic description: Subject standard is generally applied in the context of object data topic. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: related_to domain: DataStandardOrTool multivalued: true inherited: true alias: concerns_data_topic owner: ModelRepository domain_of: - DataStandardOrTool range: DataTopic has_relevant_organization: name: has_relevant_organization description: Subject standard is managed or otherwise guided buy the object organization(s). from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: related_to domain: DataStandardOrTool multivalued: true inherited: true alias: has_relevant_organization owner: ModelRepository domain_of: - DataStandardOrTool range: Organization purpose_detail: name: purpose_detail description: Text description of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: purpose_detail owner: ModelRepository domain_of: - DataStandardOrTool range: string is_open: name: is_open description: Is the standard or tool FAIR and available free of cost? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: is_open owner: ModelRepository domain_of: - DataStandardOrTool range: boolean requires_registration: name: requires_registration description: Does usage of the standard or tool require registrion of a user or group with some organization or managerial body? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: requires_registration owner: ModelRepository domain_of: - DataStandardOrTool range: boolean url: name: url description: URL for basic documentation of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: url owner: ModelRepository domain_of: - DataStandardOrTool - Organization range: uriorcurie publication: name: publication description: Relevant publication for the standard or tool. Prefer a DOI or PUBMED. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: publication owner: ModelRepository domain_of: - DataStandardOrTool range: uriorcurie formal_specification: name: formal_specification description: Relevant code repository or other location for a formal specification of the standard or tool. Often a URL, particularly to a Git repository. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: formal_specification owner: ModelRepository domain_of: - DataStandardOrTool range: uriorcurie not_relevant_to_dgps: name: not_relevant_to_dgps description: Is the standard or tool currently relevant to DGPs? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: not_relevant_to_dgps owner: ModelRepository domain_of: - DataStandardOrTool range: boolean id: name: id description: A unique identifier for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:identifier identifier: true alias: id owner: ModelRepository domain_of: - NamedThing range: uriorcurie required: true category: name: category description: Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\". from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: type domain: NamedThing designates_type: true alias: category owner: ModelRepository domain_of: - NamedThing range: category_type name: name: name description: A human-readable name for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:name alias: name owner: ModelRepository domain_of: - NamedThing range: string description: name: description description: A human-readable description for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:description alias: description owner: ModelRepository domain_of: - NamedThing range: string subclass_of: name: subclass_of description: Holds between two classes where the domain class is a specialization of the range class. from_schema: https://w3id.org/bridge2ai/standards-schema-all exact_mappings: - rdfs:subClassOf - MESH:isa narrow_mappings: - rdfs:subPropertyOf rank: 1000 is_a: related_to domain: NamedThing multivalued: true inherited: true alias: subclass_of owner: ModelRepository domain_of: - NamedThing range: NamedThing related_to: name: related_to description: A relationship that is asserted between two named things. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 domain: NamedThing multivalued: true inherited: true alias: related_to owner: ModelRepository domain_of: - NamedThing - Organization symmetric: true range: NamedThing contributor_name: name: contributor_name description: The name of the person who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_name owner: ModelRepository domain_of: - NamedThing range: string contributor_github_name: name: contributor_github_name description: The name of the github user who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_github_name owner: ModelRepository domain_of: - NamedThing range: string contributor_orcid: name: contributor_orcid description: The ORCiD of the person who added this node. examples: - value: ORCID:0000-0001-1234-5678 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_orcid owner: ModelRepository domain_of: - NamedThing range: uriorcurie contribution_date: name: contribution_date description: The date on which the node was added. examples: - value: '2023-03-20' from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contribution_date owner: ModelRepository domain_of: - NamedThing range: date","title":"Induced"},{"location":"NamedThing/","text":"Class: NamedThing A generic grouping for any identifiable entity URI: schema:Thing classDiagram class NamedThing NamedThing <|-- UseCase NamedThing <|-- DataStandardOrTool NamedThing <|-- DataTopic NamedThing <|-- AnatomicalEntity NamedThing <|-- Organization NamedThing <|-- DataSubstrate NamedThing : category NamedThing : contribution_date NamedThing : contributor_github_name NamedThing : contributor_name NamedThing : contributor_orcid NamedThing : description NamedThing : id NamedThing : name NamedThing : related_to NamedThing ..> NamedThing : related_to NamedThing : subclass_of NamedThing ..> NamedThing : subclass_of Inheritance NamedThing UseCase DataStandardOrTool DataTopic AnatomicalEntity Organization DataSubstrate Slots Name Cardinality and Range Description Inheritance id 1..1 Uriorcurie A unique identifier for a thing direct category 0..1 CategoryType Name of the high level ontology class in which this entity is categorized direct name 0..1 String A human-readable name for a thing direct description 0..1 String A human-readable description for a thing direct subclass_of 0..* NamedThing Holds between two classes where the domain class is a specialization of the r... direct related_to 0..* NamedThing A relationship that is asserted between two named things direct contributor_name 0..1 String The name of the person who added this node direct contributor_github_name 0..1 String The name of the github user who added this node direct contributor_orcid 0..1 Uriorcurie The ORCiD of the person who added this node direct contribution_date 0..1 Date The date on which the node was added direct Usages used by used in type used UseCase use_case_category domain NamedThing UseCase known_limitations domain NamedThing UseCase data_topics domain NamedThing UseCase data_substrates domain NamedThing UseCase standards_and_tools_for_dgp_use domain NamedThing UseCase alternative_standards_and_tools domain NamedThing UseCase enables domain NamedThing UseCase involved_in_experimental_design domain NamedThing UseCase involved_in_metadata_management domain NamedThing UseCase involved_in_quality_control domain NamedThing UseCase xref domain NamedThing UseCase category domain NamedThing UseCase subclass_of domain NamedThing UseCase subclass_of range NamedThing UseCase related_to domain NamedThing UseCase related_to range NamedThing UseCase contributor_name domain NamedThing UseCase contributor_github_name domain NamedThing UseCase contributor_orcid domain NamedThing UseCase contribution_date domain NamedThing DataStandardOrTool collection domain NamedThing DataStandardOrTool purpose_detail domain NamedThing DataStandardOrTool is_open domain NamedThing DataStandardOrTool requires_registration domain NamedThing DataStandardOrTool url domain NamedThing DataStandardOrTool publication domain NamedThing DataStandardOrTool formal_specification domain NamedThing DataStandardOrTool not_relevant_to_dgps domain NamedThing DataStandardOrTool category domain NamedThing DataStandardOrTool subclass_of domain NamedThing DataStandardOrTool subclass_of range NamedThing DataStandardOrTool related_to domain NamedThing DataStandardOrTool related_to range NamedThing DataStandardOrTool contributor_name domain NamedThing DataStandardOrTool contributor_github_name domain NamedThing DataStandardOrTool contributor_orcid domain NamedThing DataStandardOrTool contribution_date domain NamedThing DataStandard collection domain NamedThing DataStandard purpose_detail domain NamedThing DataStandard is_open domain NamedThing DataStandard requires_registration domain NamedThing DataStandard url domain NamedThing DataStandard publication domain NamedThing DataStandard formal_specification domain NamedThing DataStandard not_relevant_to_dgps domain NamedThing DataStandard category domain NamedThing DataStandard subclass_of domain NamedThing DataStandard subclass_of range NamedThing DataStandard related_to domain NamedThing DataStandard related_to range NamedThing DataStandard contributor_name domain NamedThing DataStandard contributor_github_name domain NamedThing DataStandard contributor_orcid domain NamedThing DataStandard contribution_date domain NamedThing BiomedicalStandard collection domain NamedThing BiomedicalStandard purpose_detail domain NamedThing BiomedicalStandard is_open domain NamedThing BiomedicalStandard requires_registration domain NamedThing BiomedicalStandard url domain NamedThing BiomedicalStandard publication domain NamedThing BiomedicalStandard formal_specification domain NamedThing BiomedicalStandard not_relevant_to_dgps domain NamedThing BiomedicalStandard category domain NamedThing BiomedicalStandard subclass_of domain NamedThing BiomedicalStandard subclass_of range NamedThing BiomedicalStandard related_to domain NamedThing BiomedicalStandard related_to range NamedThing BiomedicalStandard contributor_name domain NamedThing BiomedicalStandard contributor_github_name domain NamedThing BiomedicalStandard contributor_orcid domain NamedThing BiomedicalStandard contribution_date domain NamedThing Registry collection domain NamedThing Registry purpose_detail domain NamedThing Registry is_open domain NamedThing Registry requires_registration domain NamedThing Registry url domain NamedThing Registry publication domain NamedThing Registry formal_specification domain NamedThing Registry not_relevant_to_dgps domain NamedThing Registry category domain NamedThing Registry subclass_of domain NamedThing Registry subclass_of range NamedThing Registry related_to domain NamedThing Registry related_to range NamedThing Registry contributor_name domain NamedThing Registry contributor_github_name domain NamedThing Registry contributor_orcid domain NamedThing Registry contribution_date domain NamedThing OntologyOrVocabulary collection domain NamedThing OntologyOrVocabulary purpose_detail domain NamedThing OntologyOrVocabulary is_open domain NamedThing OntologyOrVocabulary requires_registration domain NamedThing OntologyOrVocabulary url domain NamedThing OntologyOrVocabulary publication domain NamedThing OntologyOrVocabulary formal_specification domain NamedThing OntologyOrVocabulary not_relevant_to_dgps domain NamedThing OntologyOrVocabulary category domain NamedThing OntologyOrVocabulary subclass_of domain NamedThing OntologyOrVocabulary subclass_of range NamedThing OntologyOrVocabulary related_to domain NamedThing OntologyOrVocabulary related_to range NamedThing OntologyOrVocabulary contributor_name domain NamedThing OntologyOrVocabulary contributor_github_name domain NamedThing OntologyOrVocabulary contributor_orcid domain NamedThing OntologyOrVocabulary contribution_date domain NamedThing ModelRepository collection domain NamedThing ModelRepository purpose_detail domain NamedThing ModelRepository is_open domain NamedThing ModelRepository requires_registration domain NamedThing ModelRepository url domain NamedThing ModelRepository publication domain NamedThing ModelRepository formal_specification domain NamedThing ModelRepository not_relevant_to_dgps domain NamedThing ModelRepository category domain NamedThing ModelRepository subclass_of domain NamedThing ModelRepository subclass_of range NamedThing ModelRepository related_to domain NamedThing ModelRepository related_to range NamedThing ModelRepository contributor_name domain NamedThing ModelRepository contributor_github_name domain NamedThing ModelRepository contributor_orcid domain NamedThing ModelRepository contribution_date domain NamedThing ReferenceDataOrDataset collection domain NamedThing ReferenceDataOrDataset purpose_detail domain NamedThing ReferenceDataOrDataset is_open domain NamedThing ReferenceDataOrDataset requires_registration domain NamedThing ReferenceDataOrDataset url domain NamedThing ReferenceDataOrDataset publication domain NamedThing ReferenceDataOrDataset formal_specification domain NamedThing ReferenceDataOrDataset not_relevant_to_dgps domain NamedThing ReferenceDataOrDataset category domain NamedThing ReferenceDataOrDataset subclass_of domain NamedThing ReferenceDataOrDataset subclass_of range NamedThing ReferenceDataOrDataset related_to domain NamedThing ReferenceDataOrDataset related_to range NamedThing ReferenceDataOrDataset contributor_name domain NamedThing ReferenceDataOrDataset contributor_github_name domain NamedThing ReferenceDataOrDataset contributor_orcid domain NamedThing ReferenceDataOrDataset contribution_date domain NamedThing SoftwareOrTool collection domain NamedThing SoftwareOrTool purpose_detail domain NamedThing SoftwareOrTool is_open domain NamedThing SoftwareOrTool requires_registration domain NamedThing SoftwareOrTool url domain NamedThing SoftwareOrTool publication domain NamedThing SoftwareOrTool formal_specification domain NamedThing SoftwareOrTool not_relevant_to_dgps domain NamedThing SoftwareOrTool category domain NamedThing SoftwareOrTool subclass_of domain NamedThing SoftwareOrTool subclass_of range NamedThing SoftwareOrTool related_to domain NamedThing SoftwareOrTool related_to range NamedThing SoftwareOrTool contributor_name domain NamedThing SoftwareOrTool contributor_github_name domain NamedThing SoftwareOrTool contributor_orcid domain NamedThing SoftwareOrTool contribution_date domain NamedThing ReferenceImplementation collection domain NamedThing ReferenceImplementation purpose_detail domain NamedThing ReferenceImplementation is_open domain NamedThing ReferenceImplementation requires_registration domain NamedThing ReferenceImplementation url domain NamedThing ReferenceImplementation publication domain NamedThing ReferenceImplementation formal_specification domain NamedThing ReferenceImplementation not_relevant_to_dgps domain NamedThing ReferenceImplementation category domain NamedThing ReferenceImplementation subclass_of domain NamedThing ReferenceImplementation subclass_of range NamedThing ReferenceImplementation related_to domain NamedThing ReferenceImplementation related_to range NamedThing ReferenceImplementation contributor_name domain NamedThing ReferenceImplementation contributor_github_name domain NamedThing ReferenceImplementation contributor_orcid domain NamedThing ReferenceImplementation contribution_date domain NamedThing TrainingProgram collection domain NamedThing TrainingProgram purpose_detail domain NamedThing TrainingProgram is_open domain NamedThing TrainingProgram requires_registration domain NamedThing TrainingProgram url domain NamedThing TrainingProgram publication domain NamedThing TrainingProgram formal_specification domain NamedThing TrainingProgram not_relevant_to_dgps domain NamedThing TrainingProgram category domain NamedThing TrainingProgram subclass_of domain NamedThing TrainingProgram subclass_of range NamedThing TrainingProgram related_to domain NamedThing TrainingProgram related_to range NamedThing TrainingProgram contributor_name domain NamedThing TrainingProgram contributor_github_name domain NamedThing TrainingProgram contributor_orcid domain NamedThing TrainingProgram contribution_date domain NamedThing DataTopic category domain NamedThing DataTopic subclass_of domain NamedThing DataTopic subclass_of range NamedThing DataTopic related_to domain NamedThing DataTopic related_to range NamedThing DataTopic contributor_name domain NamedThing DataTopic contributor_github_name domain NamedThing DataTopic contributor_orcid domain NamedThing DataTopic contribution_date domain NamedThing NamedThing category domain NamedThing NamedThing subclass_of domain NamedThing NamedThing subclass_of range NamedThing NamedThing related_to domain NamedThing NamedThing related_to range NamedThing NamedThing contributor_name domain NamedThing NamedThing contributor_github_name domain NamedThing NamedThing contributor_orcid domain NamedThing NamedThing contribution_date domain NamedThing AnatomicalEntity category domain NamedThing AnatomicalEntity subclass_of domain NamedThing AnatomicalEntity subclass_of range NamedThing AnatomicalEntity related_to domain NamedThing AnatomicalEntity related_to range NamedThing AnatomicalEntity contributor_name domain NamedThing AnatomicalEntity contributor_github_name domain NamedThing AnatomicalEntity contributor_orcid domain NamedThing AnatomicalEntity contribution_date domain NamedThing Organization url domain NamedThing Organization related_to domain NamedThing Organization related_to range NamedThing Organization category domain NamedThing Organization subclass_of domain NamedThing Organization subclass_of range NamedThing Organization contributor_name domain NamedThing Organization contributor_github_name domain NamedThing Organization contributor_orcid domain NamedThing Organization contribution_date domain NamedThing DataSubstrate metadata_storage domain NamedThing DataSubstrate file_extensions domain NamedThing DataSubstrate limitations domain NamedThing DataSubstrate category domain NamedThing DataSubstrate subclass_of domain NamedThing DataSubstrate subclass_of range NamedThing DataSubstrate related_to domain NamedThing DataSubstrate related_to range NamedThing DataSubstrate contributor_name domain NamedThing DataSubstrate contributor_github_name domain NamedThing DataSubstrate contributor_orcid domain NamedThing DataSubstrate contribution_date domain NamedThing Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all Mappings Mapping Type Mapped Value self schema:Thing native https://w3id.org/bridge2ai/standards-schema-all/:NamedThing LinkML Source Direct name: NamedThing description: A generic grouping for any identifiable entity from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slots: - id - category - name - description - subclass_of - related_to - contributor_name - contributor_github_name - contributor_orcid - contribution_date class_uri: schema:Thing Induced name: NamedThing description: A generic grouping for any identifiable entity from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 attributes: id: name: id description: A unique identifier for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:identifier identifier: true alias: id owner: NamedThing domain_of: - NamedThing range: uriorcurie required: true category: name: category description: Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\". from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: type domain: NamedThing designates_type: true alias: category owner: NamedThing domain_of: - NamedThing range: category_type name: name: name description: A human-readable name for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:name alias: name owner: NamedThing domain_of: - NamedThing range: string description: name: description description: A human-readable description for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:description alias: description owner: NamedThing domain_of: - NamedThing range: string subclass_of: name: subclass_of description: Holds between two classes where the domain class is a specialization of the range class. from_schema: https://w3id.org/bridge2ai/standards-schema-all exact_mappings: - rdfs:subClassOf - MESH:isa narrow_mappings: - rdfs:subPropertyOf rank: 1000 is_a: related_to domain: NamedThing multivalued: true inherited: true alias: subclass_of owner: NamedThing domain_of: - NamedThing range: NamedThing related_to: name: related_to description: A relationship that is asserted between two named things. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 domain: NamedThing multivalued: true inherited: true alias: related_to owner: NamedThing domain_of: - NamedThing - Organization symmetric: true range: NamedThing contributor_name: name: contributor_name description: The name of the person who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_name owner: NamedThing domain_of: - NamedThing range: string contributor_github_name: name: contributor_github_name description: The name of the github user who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_github_name owner: NamedThing domain_of: - NamedThing range: string contributor_orcid: name: contributor_orcid description: The ORCiD of the person who added this node. examples: - value: ORCID:0000-0001-1234-5678 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_orcid owner: NamedThing domain_of: - NamedThing range: uriorcurie contribution_date: name: contribution_date description: The date on which the node was added. examples: - value: '2023-03-20' from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contribution_date owner: NamedThing domain_of: - NamedThing range: date class_uri: schema:Thing","title":"Class: NamedThing"},{"location":"NamedThing/#class-namedthing","text":"A generic grouping for any identifiable entity URI: schema:Thing classDiagram class NamedThing NamedThing <|-- UseCase NamedThing <|-- DataStandardOrTool NamedThing <|-- DataTopic NamedThing <|-- AnatomicalEntity NamedThing <|-- Organization NamedThing <|-- DataSubstrate NamedThing : category NamedThing : contribution_date NamedThing : contributor_github_name NamedThing : contributor_name NamedThing : contributor_orcid NamedThing : description NamedThing : id NamedThing : name NamedThing : related_to NamedThing ..> NamedThing : related_to NamedThing : subclass_of NamedThing ..> NamedThing : subclass_of","title":"Class: NamedThing"},{"location":"NamedThing/#inheritance","text":"NamedThing UseCase DataStandardOrTool DataTopic AnatomicalEntity Organization DataSubstrate","title":"Inheritance"},{"location":"NamedThing/#slots","text":"Name Cardinality and Range Description Inheritance id 1..1 Uriorcurie A unique identifier for a thing direct category 0..1 CategoryType Name of the high level ontology class in which this entity is categorized direct name 0..1 String A human-readable name for a thing direct description 0..1 String A human-readable description for a thing direct subclass_of 0..* NamedThing Holds between two classes where the domain class is a specialization of the r... direct related_to 0..* NamedThing A relationship that is asserted between two named things direct contributor_name 0..1 String The name of the person who added this node direct contributor_github_name 0..1 String The name of the github user who added this node direct contributor_orcid 0..1 Uriorcurie The ORCiD of the person who added this node direct contribution_date 0..1 Date The date on which the node was added direct","title":"Slots"},{"location":"NamedThing/#usages","text":"used by used in type used UseCase use_case_category domain NamedThing UseCase known_limitations domain NamedThing UseCase data_topics domain NamedThing UseCase data_substrates domain NamedThing UseCase standards_and_tools_for_dgp_use domain NamedThing UseCase alternative_standards_and_tools domain NamedThing UseCase enables domain NamedThing UseCase involved_in_experimental_design domain NamedThing UseCase involved_in_metadata_management domain NamedThing UseCase involved_in_quality_control domain NamedThing UseCase xref domain NamedThing UseCase category domain NamedThing UseCase subclass_of domain NamedThing UseCase subclass_of range NamedThing UseCase related_to domain NamedThing UseCase related_to range NamedThing UseCase contributor_name domain NamedThing UseCase contributor_github_name domain NamedThing UseCase contributor_orcid domain NamedThing UseCase contribution_date domain NamedThing DataStandardOrTool collection domain NamedThing DataStandardOrTool purpose_detail domain NamedThing DataStandardOrTool is_open domain NamedThing DataStandardOrTool requires_registration domain NamedThing DataStandardOrTool url domain NamedThing DataStandardOrTool publication domain NamedThing DataStandardOrTool formal_specification domain NamedThing DataStandardOrTool not_relevant_to_dgps domain NamedThing DataStandardOrTool category domain NamedThing DataStandardOrTool subclass_of domain NamedThing DataStandardOrTool subclass_of range NamedThing DataStandardOrTool related_to domain NamedThing DataStandardOrTool related_to range NamedThing DataStandardOrTool contributor_name domain NamedThing DataStandardOrTool contributor_github_name domain NamedThing DataStandardOrTool contributor_orcid domain NamedThing DataStandardOrTool contribution_date domain NamedThing DataStandard collection domain NamedThing DataStandard purpose_detail domain NamedThing DataStandard is_open domain NamedThing DataStandard requires_registration domain NamedThing DataStandard url domain NamedThing DataStandard publication domain NamedThing DataStandard formal_specification domain NamedThing DataStandard not_relevant_to_dgps domain NamedThing DataStandard category domain NamedThing DataStandard subclass_of domain NamedThing DataStandard subclass_of range NamedThing DataStandard related_to domain NamedThing DataStandard related_to range NamedThing DataStandard contributor_name domain NamedThing DataStandard contributor_github_name domain NamedThing DataStandard contributor_orcid domain NamedThing DataStandard contribution_date domain NamedThing BiomedicalStandard collection domain NamedThing BiomedicalStandard purpose_detail domain NamedThing BiomedicalStandard is_open domain NamedThing BiomedicalStandard requires_registration domain NamedThing BiomedicalStandard url domain NamedThing BiomedicalStandard publication domain NamedThing BiomedicalStandard formal_specification domain NamedThing BiomedicalStandard not_relevant_to_dgps domain NamedThing BiomedicalStandard category domain NamedThing BiomedicalStandard subclass_of domain NamedThing BiomedicalStandard subclass_of range NamedThing BiomedicalStandard related_to domain NamedThing BiomedicalStandard related_to range NamedThing BiomedicalStandard contributor_name domain NamedThing BiomedicalStandard contributor_github_name domain NamedThing BiomedicalStandard contributor_orcid domain NamedThing BiomedicalStandard contribution_date domain NamedThing Registry collection domain NamedThing Registry purpose_detail domain NamedThing Registry is_open domain NamedThing Registry requires_registration domain NamedThing Registry url domain NamedThing Registry publication domain NamedThing Registry formal_specification domain NamedThing Registry not_relevant_to_dgps domain NamedThing Registry category domain NamedThing Registry subclass_of domain NamedThing Registry subclass_of range NamedThing Registry related_to domain NamedThing Registry related_to range NamedThing Registry contributor_name domain NamedThing Registry contributor_github_name domain NamedThing Registry contributor_orcid domain NamedThing Registry contribution_date domain NamedThing OntologyOrVocabulary collection domain NamedThing OntologyOrVocabulary purpose_detail domain NamedThing OntologyOrVocabulary is_open domain NamedThing OntologyOrVocabulary requires_registration domain NamedThing OntologyOrVocabulary url domain NamedThing OntologyOrVocabulary publication domain NamedThing OntologyOrVocabulary formal_specification domain NamedThing OntologyOrVocabulary not_relevant_to_dgps domain NamedThing OntologyOrVocabulary category domain NamedThing OntologyOrVocabulary subclass_of domain NamedThing OntologyOrVocabulary subclass_of range NamedThing OntologyOrVocabulary related_to domain NamedThing OntologyOrVocabulary related_to range NamedThing OntologyOrVocabulary contributor_name domain NamedThing OntologyOrVocabulary contributor_github_name domain NamedThing OntologyOrVocabulary contributor_orcid domain NamedThing OntologyOrVocabulary contribution_date domain NamedThing ModelRepository collection domain NamedThing ModelRepository purpose_detail domain NamedThing ModelRepository is_open domain NamedThing ModelRepository requires_registration domain NamedThing ModelRepository url domain NamedThing ModelRepository publication domain NamedThing ModelRepository formal_specification domain NamedThing ModelRepository not_relevant_to_dgps domain NamedThing ModelRepository category domain NamedThing ModelRepository subclass_of domain NamedThing ModelRepository subclass_of range NamedThing ModelRepository related_to domain NamedThing ModelRepository related_to range NamedThing ModelRepository contributor_name domain NamedThing ModelRepository contributor_github_name domain NamedThing ModelRepository contributor_orcid domain NamedThing ModelRepository contribution_date domain NamedThing ReferenceDataOrDataset collection domain NamedThing ReferenceDataOrDataset purpose_detail domain NamedThing ReferenceDataOrDataset is_open domain NamedThing ReferenceDataOrDataset requires_registration domain NamedThing ReferenceDataOrDataset url domain NamedThing ReferenceDataOrDataset publication domain NamedThing ReferenceDataOrDataset formal_specification domain NamedThing ReferenceDataOrDataset not_relevant_to_dgps domain NamedThing ReferenceDataOrDataset category domain NamedThing ReferenceDataOrDataset subclass_of domain NamedThing ReferenceDataOrDataset subclass_of range NamedThing ReferenceDataOrDataset related_to domain NamedThing ReferenceDataOrDataset related_to range NamedThing ReferenceDataOrDataset contributor_name domain NamedThing ReferenceDataOrDataset contributor_github_name domain NamedThing ReferenceDataOrDataset contributor_orcid domain NamedThing ReferenceDataOrDataset contribution_date domain NamedThing SoftwareOrTool collection domain NamedThing SoftwareOrTool purpose_detail domain NamedThing SoftwareOrTool is_open domain NamedThing SoftwareOrTool requires_registration domain NamedThing SoftwareOrTool url domain NamedThing SoftwareOrTool publication domain NamedThing SoftwareOrTool formal_specification domain NamedThing SoftwareOrTool not_relevant_to_dgps domain NamedThing SoftwareOrTool category domain NamedThing SoftwareOrTool subclass_of domain NamedThing SoftwareOrTool subclass_of range NamedThing SoftwareOrTool related_to domain NamedThing SoftwareOrTool related_to range NamedThing SoftwareOrTool contributor_name domain NamedThing SoftwareOrTool contributor_github_name domain NamedThing SoftwareOrTool contributor_orcid domain NamedThing SoftwareOrTool contribution_date domain NamedThing ReferenceImplementation collection domain NamedThing ReferenceImplementation purpose_detail domain NamedThing ReferenceImplementation is_open domain NamedThing ReferenceImplementation requires_registration domain NamedThing ReferenceImplementation url domain NamedThing ReferenceImplementation publication domain NamedThing ReferenceImplementation formal_specification domain NamedThing ReferenceImplementation not_relevant_to_dgps domain NamedThing ReferenceImplementation category domain NamedThing ReferenceImplementation subclass_of domain NamedThing ReferenceImplementation subclass_of range NamedThing ReferenceImplementation related_to domain NamedThing ReferenceImplementation related_to range NamedThing ReferenceImplementation contributor_name domain NamedThing ReferenceImplementation contributor_github_name domain NamedThing ReferenceImplementation contributor_orcid domain NamedThing ReferenceImplementation contribution_date domain NamedThing TrainingProgram collection domain NamedThing TrainingProgram purpose_detail domain NamedThing TrainingProgram is_open domain NamedThing TrainingProgram requires_registration domain NamedThing TrainingProgram url domain NamedThing TrainingProgram publication domain NamedThing TrainingProgram formal_specification domain NamedThing TrainingProgram not_relevant_to_dgps domain NamedThing TrainingProgram category domain NamedThing TrainingProgram subclass_of domain NamedThing TrainingProgram subclass_of range NamedThing TrainingProgram related_to domain NamedThing TrainingProgram related_to range NamedThing TrainingProgram contributor_name domain NamedThing TrainingProgram contributor_github_name domain NamedThing TrainingProgram contributor_orcid domain NamedThing TrainingProgram contribution_date domain NamedThing DataTopic category domain NamedThing DataTopic subclass_of domain NamedThing DataTopic subclass_of range NamedThing DataTopic related_to domain NamedThing DataTopic related_to range NamedThing DataTopic contributor_name domain NamedThing DataTopic contributor_github_name domain NamedThing DataTopic contributor_orcid domain NamedThing DataTopic contribution_date domain NamedThing NamedThing category domain NamedThing NamedThing subclass_of domain NamedThing NamedThing subclass_of range NamedThing NamedThing related_to domain NamedThing NamedThing related_to range NamedThing NamedThing contributor_name domain NamedThing NamedThing contributor_github_name domain NamedThing NamedThing contributor_orcid domain NamedThing NamedThing contribution_date domain NamedThing AnatomicalEntity category domain NamedThing AnatomicalEntity subclass_of domain NamedThing AnatomicalEntity subclass_of range NamedThing AnatomicalEntity related_to domain NamedThing AnatomicalEntity related_to range NamedThing AnatomicalEntity contributor_name domain NamedThing AnatomicalEntity contributor_github_name domain NamedThing AnatomicalEntity contributor_orcid domain NamedThing AnatomicalEntity contribution_date domain NamedThing Organization url domain NamedThing Organization related_to domain NamedThing Organization related_to range NamedThing Organization category domain NamedThing Organization subclass_of domain NamedThing Organization subclass_of range NamedThing Organization contributor_name domain NamedThing Organization contributor_github_name domain NamedThing Organization contributor_orcid domain NamedThing Organization contribution_date domain NamedThing DataSubstrate metadata_storage domain NamedThing DataSubstrate file_extensions domain NamedThing DataSubstrate limitations domain NamedThing DataSubstrate category domain NamedThing DataSubstrate subclass_of domain NamedThing DataSubstrate subclass_of range NamedThing DataSubstrate related_to domain NamedThing DataSubstrate related_to range NamedThing DataSubstrate contributor_name domain NamedThing DataSubstrate contributor_github_name domain NamedThing DataSubstrate contributor_orcid domain NamedThing DataSubstrate contribution_date domain NamedThing","title":"Usages"},{"location":"NamedThing/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"NamedThing/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"NamedThing/#mappings","text":"Mapping Type Mapped Value self schema:Thing native https://w3id.org/bridge2ai/standards-schema-all/:NamedThing","title":"Mappings"},{"location":"NamedThing/#linkml-source","text":"","title":"LinkML Source"},{"location":"NamedThing/#direct","text":"name: NamedThing description: A generic grouping for any identifiable entity from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slots: - id - category - name - description - subclass_of - related_to - contributor_name - contributor_github_name - contributor_orcid - contribution_date class_uri: schema:Thing","title":"Direct"},{"location":"NamedThing/#induced","text":"name: NamedThing description: A generic grouping for any identifiable entity from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 attributes: id: name: id description: A unique identifier for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:identifier identifier: true alias: id owner: NamedThing domain_of: - NamedThing range: uriorcurie required: true category: name: category description: Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\". from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: type domain: NamedThing designates_type: true alias: category owner: NamedThing domain_of: - NamedThing range: category_type name: name: name description: A human-readable name for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:name alias: name owner: NamedThing domain_of: - NamedThing range: string description: name: description description: A human-readable description for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:description alias: description owner: NamedThing domain_of: - NamedThing range: string subclass_of: name: subclass_of description: Holds between two classes where the domain class is a specialization of the range class. from_schema: https://w3id.org/bridge2ai/standards-schema-all exact_mappings: - rdfs:subClassOf - MESH:isa narrow_mappings: - rdfs:subPropertyOf rank: 1000 is_a: related_to domain: NamedThing multivalued: true inherited: true alias: subclass_of owner: NamedThing domain_of: - NamedThing range: NamedThing related_to: name: related_to description: A relationship that is asserted between two named things. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 domain: NamedThing multivalued: true inherited: true alias: related_to owner: NamedThing domain_of: - NamedThing - Organization symmetric: true range: NamedThing contributor_name: name: contributor_name description: The name of the person who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_name owner: NamedThing domain_of: - NamedThing range: string contributor_github_name: name: contributor_github_name description: The name of the github user who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_github_name owner: NamedThing domain_of: - NamedThing range: string contributor_orcid: name: contributor_orcid description: The ORCiD of the person who added this node. examples: - value: ORCID:0000-0001-1234-5678 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_orcid owner: NamedThing domain_of: - NamedThing range: uriorcurie contribution_date: name: contribution_date description: The date on which the node was added. examples: - value: '2023-03-20' from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contribution_date owner: NamedThing domain_of: - NamedThing range: date class_uri: schema:Thing","title":"Induced"},{"location":"NcitIdentifier/","text":"Type: NcitIdentifier Identifier from NCIT reference terminology with broad coverage of the cancer domain. URI: xsd:anyURI base : URIorCURIE uri : xsd:anyURI repr : str typeof : uriorcurie Identifier and Mapping Information Valid ID Prefixes Instances of this class should have identifiers with one of the following prefixes: NCIT Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Type: NcitIdentifier"},{"location":"NcitIdentifier/#type-ncitidentifier","text":"Identifier from NCIT reference terminology with broad coverage of the cancer domain. URI: xsd:anyURI base : URIorCURIE uri : xsd:anyURI repr : str typeof : uriorcurie","title":"Type: NcitIdentifier"},{"location":"NcitIdentifier/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"NcitIdentifier/#valid-id-prefixes","text":"Instances of this class should have identifiers with one of the following prefixes: NCIT","title":"Valid ID Prefixes"},{"location":"NcitIdentifier/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"Ncname/","text":"Type: Ncname Prefix part of CURIE URI: xsd:string base : NCName uri : xsd:string repr : str Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Type: Ncname"},{"location":"Ncname/#type-ncname","text":"Prefix part of CURIE URI: xsd:string base : NCName uri : xsd:string repr : str","title":"Type: Ncname"},{"location":"Ncname/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Ncname/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"Nodeidentifier/","text":"Type: Nodeidentifier A URI, CURIE or BNODE that represents a node in a model. URI: shex:nonLiteral base : NodeIdentifier uri : shex:nonLiteral repr : str Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Type: Nodeidentifier"},{"location":"Nodeidentifier/#type-nodeidentifier","text":"A URI, CURIE or BNODE that represents a node in a model. URI: shex:nonLiteral base : NodeIdentifier uri : shex:nonLiteral repr : str","title":"Type: Nodeidentifier"},{"location":"Nodeidentifier/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Nodeidentifier/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"Objectidentifier/","text":"Type: Objectidentifier A URI or CURIE that represents an object in the model. URI: shex:iri base : ElementIdentifier uri : shex:iri repr : str Comments Used for inheritence and type checking Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Type: Objectidentifier"},{"location":"Objectidentifier/#type-objectidentifier","text":"A URI or CURIE that represents an object in the model. URI: shex:iri base : ElementIdentifier uri : shex:iri repr : str","title":"Type: Objectidentifier"},{"location":"Objectidentifier/#comments","text":"Used for inheritence and type checking","title":"Comments"},{"location":"Objectidentifier/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Objectidentifier/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"OntologyOrVocabulary/","text":"Class: OntologyOrVocabulary A set of concepts and categories, potentially defined or accompanied by their hierarchical relationships. URI: https://w3id.org/bridge2ai/standards-schema-all/:OntologyOrVocabulary classDiagram class OntologyOrVocabulary DataStandardOrTool <|-- OntologyOrVocabulary OntologyOrVocabulary : category OntologyOrVocabulary : collection OntologyOrVocabulary ..> StandardsCollectionTag : collection OntologyOrVocabulary : concerns_data_topic OntologyOrVocabulary ..> DataTopic : concerns_data_topic OntologyOrVocabulary : contribution_date OntologyOrVocabulary : contributor_github_name OntologyOrVocabulary : contributor_name OntologyOrVocabulary : contributor_orcid OntologyOrVocabulary : description OntologyOrVocabulary : formal_specification OntologyOrVocabulary : has_relevant_organization OntologyOrVocabulary ..> Organization : has_relevant_organization OntologyOrVocabulary : id OntologyOrVocabulary : is_open OntologyOrVocabulary : name OntologyOrVocabulary : not_relevant_to_dgps OntologyOrVocabulary : publication OntologyOrVocabulary : purpose_detail OntologyOrVocabulary : related_to OntologyOrVocabulary ..> NamedThing : related_to OntologyOrVocabulary : requires_registration OntologyOrVocabulary : subclass_of OntologyOrVocabulary ..> NamedThing : subclass_of OntologyOrVocabulary : url Inheritance NamedThing DataStandardOrTool OntologyOrVocabulary Slots Name Cardinality and Range Description Inheritance collection 0..* StandardsCollectionTag Tags for specific sets of standards DataStandardOrTool concerns_data_topic 0..* DataTopic Subject standard is generally applied in the context of object data topic DataStandardOrTool has_relevant_organization 0..* Organization Subject standard is managed or otherwise guided buy the object organization(s... DataStandardOrTool purpose_detail 0..1 String Text description of the standard or tool DataStandardOrTool is_open 0..1 Boolean Is the standard or tool FAIR and available free of cost? DataStandardOrTool requires_registration 0..1 Boolean Does usage of the standard or tool require registrion of a user or group with... DataStandardOrTool url 0..1 Uriorcurie URL for basic documentation of the standard or tool DataStandardOrTool publication 0..1 Uriorcurie Relevant publication for the standard or tool DataStandardOrTool formal_specification 0..1 Uriorcurie Relevant code repository or other location for a formal specification of the ... DataStandardOrTool not_relevant_to_dgps 0..1 Boolean Is the standard or tool currently relevant to DGPs? DataStandardOrTool id 1..1 Uriorcurie A unique identifier for a thing NamedThing category 0..1 CategoryType Name of the high level ontology class in which this entity is categorized NamedThing name 0..1 String A human-readable name for a thing NamedThing description 0..1 String A human-readable description for a thing NamedThing subclass_of 0..* NamedThing Holds between two classes where the domain class is a specialization of the r... NamedThing related_to 0..* NamedThing A relationship that is asserted between two named things NamedThing contributor_name 0..1 String The name of the person who added this node NamedThing contributor_github_name 0..1 String The name of the github user who added this node NamedThing contributor_orcid 0..1 Uriorcurie The ORCiD of the person who added this node NamedThing contribution_date 0..1 Date The date on which the node was added NamedThing Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all Mappings Mapping Type Mapped Value self https://w3id.org/bridge2ai/standards-schema-all/:OntologyOrVocabulary native https://w3id.org/bridge2ai/standards-schema-all/:OntologyOrVocabulary LinkML Source Direct name: OntologyOrVocabulary description: A set of concepts and categories, potentially defined or accompanied by their hierarchical relationships. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: DataStandardOrTool Induced name: OntologyOrVocabulary description: A set of concepts and categories, potentially defined or accompanied by their hierarchical relationships. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: DataStandardOrTool attributes: collection: name: collection description: Tags for specific sets of standards. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing multivalued: true alias: collection owner: OntologyOrVocabulary domain_of: - DataStandardOrTool range: StandardsCollectionTag concerns_data_topic: name: concerns_data_topic description: Subject standard is generally applied in the context of object data topic. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: related_to domain: DataStandardOrTool multivalued: true inherited: true alias: concerns_data_topic owner: OntologyOrVocabulary domain_of: - DataStandardOrTool range: DataTopic has_relevant_organization: name: has_relevant_organization description: Subject standard is managed or otherwise guided buy the object organization(s). from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: related_to domain: DataStandardOrTool multivalued: true inherited: true alias: has_relevant_organization owner: OntologyOrVocabulary domain_of: - DataStandardOrTool range: Organization purpose_detail: name: purpose_detail description: Text description of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: purpose_detail owner: OntologyOrVocabulary domain_of: - DataStandardOrTool range: string is_open: name: is_open description: Is the standard or tool FAIR and available free of cost? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: is_open owner: OntologyOrVocabulary domain_of: - DataStandardOrTool range: boolean requires_registration: name: requires_registration description: Does usage of the standard or tool require registrion of a user or group with some organization or managerial body? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: requires_registration owner: OntologyOrVocabulary domain_of: - DataStandardOrTool range: boolean url: name: url description: URL for basic documentation of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: url owner: OntologyOrVocabulary domain_of: - DataStandardOrTool - Organization range: uriorcurie publication: name: publication description: Relevant publication for the standard or tool. Prefer a DOI or PUBMED. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: publication owner: OntologyOrVocabulary domain_of: - DataStandardOrTool range: uriorcurie formal_specification: name: formal_specification description: Relevant code repository or other location for a formal specification of the standard or tool. Often a URL, particularly to a Git repository. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: formal_specification owner: OntologyOrVocabulary domain_of: - DataStandardOrTool range: uriorcurie not_relevant_to_dgps: name: not_relevant_to_dgps description: Is the standard or tool currently relevant to DGPs? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: not_relevant_to_dgps owner: OntologyOrVocabulary domain_of: - DataStandardOrTool range: boolean id: name: id description: A unique identifier for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:identifier identifier: true alias: id owner: OntologyOrVocabulary domain_of: - NamedThing range: uriorcurie required: true category: name: category description: Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\". from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: type domain: NamedThing designates_type: true alias: category owner: OntologyOrVocabulary domain_of: - NamedThing range: category_type name: name: name description: A human-readable name for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:name alias: name owner: OntologyOrVocabulary domain_of: - NamedThing range: string description: name: description description: A human-readable description for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:description alias: description owner: OntologyOrVocabulary domain_of: - NamedThing range: string subclass_of: name: subclass_of description: Holds between two classes where the domain class is a specialization of the range class. from_schema: https://w3id.org/bridge2ai/standards-schema-all exact_mappings: - rdfs:subClassOf - MESH:isa narrow_mappings: - rdfs:subPropertyOf rank: 1000 is_a: related_to domain: NamedThing multivalued: true inherited: true alias: subclass_of owner: OntologyOrVocabulary domain_of: - NamedThing range: NamedThing related_to: name: related_to description: A relationship that is asserted between two named things. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 domain: NamedThing multivalued: true inherited: true alias: related_to owner: OntologyOrVocabulary domain_of: - NamedThing - Organization symmetric: true range: NamedThing contributor_name: name: contributor_name description: The name of the person who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_name owner: OntologyOrVocabulary domain_of: - NamedThing range: string contributor_github_name: name: contributor_github_name description: The name of the github user who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_github_name owner: OntologyOrVocabulary domain_of: - NamedThing range: string contributor_orcid: name: contributor_orcid description: The ORCiD of the person who added this node. examples: - value: ORCID:0000-0001-1234-5678 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_orcid owner: OntologyOrVocabulary domain_of: - NamedThing range: uriorcurie contribution_date: name: contribution_date description: The date on which the node was added. examples: - value: '2023-03-20' from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contribution_date owner: OntologyOrVocabulary domain_of: - NamedThing range: date","title":"Class: OntologyOrVocabulary"},{"location":"OntologyOrVocabulary/#class-ontologyorvocabulary","text":"A set of concepts and categories, potentially defined or accompanied by their hierarchical relationships. URI: https://w3id.org/bridge2ai/standards-schema-all/:OntologyOrVocabulary classDiagram class OntologyOrVocabulary DataStandardOrTool <|-- OntologyOrVocabulary OntologyOrVocabulary : category OntologyOrVocabulary : collection OntologyOrVocabulary ..> StandardsCollectionTag : collection OntologyOrVocabulary : concerns_data_topic OntologyOrVocabulary ..> DataTopic : concerns_data_topic OntologyOrVocabulary : contribution_date OntologyOrVocabulary : contributor_github_name OntologyOrVocabulary : contributor_name OntologyOrVocabulary : contributor_orcid OntologyOrVocabulary : description OntologyOrVocabulary : formal_specification OntologyOrVocabulary : has_relevant_organization OntologyOrVocabulary ..> Organization : has_relevant_organization OntologyOrVocabulary : id OntologyOrVocabulary : is_open OntologyOrVocabulary : name OntologyOrVocabulary : not_relevant_to_dgps OntologyOrVocabulary : publication OntologyOrVocabulary : purpose_detail OntologyOrVocabulary : related_to OntologyOrVocabulary ..> NamedThing : related_to OntologyOrVocabulary : requires_registration OntologyOrVocabulary : subclass_of OntologyOrVocabulary ..> NamedThing : subclass_of OntologyOrVocabulary : url","title":"Class: OntologyOrVocabulary"},{"location":"OntologyOrVocabulary/#inheritance","text":"NamedThing DataStandardOrTool OntologyOrVocabulary","title":"Inheritance"},{"location":"OntologyOrVocabulary/#slots","text":"Name Cardinality and Range Description Inheritance collection 0..* StandardsCollectionTag Tags for specific sets of standards DataStandardOrTool concerns_data_topic 0..* DataTopic Subject standard is generally applied in the context of object data topic DataStandardOrTool has_relevant_organization 0..* Organization Subject standard is managed or otherwise guided buy the object organization(s... DataStandardOrTool purpose_detail 0..1 String Text description of the standard or tool DataStandardOrTool is_open 0..1 Boolean Is the standard or tool FAIR and available free of cost? DataStandardOrTool requires_registration 0..1 Boolean Does usage of the standard or tool require registrion of a user or group with... DataStandardOrTool url 0..1 Uriorcurie URL for basic documentation of the standard or tool DataStandardOrTool publication 0..1 Uriorcurie Relevant publication for the standard or tool DataStandardOrTool formal_specification 0..1 Uriorcurie Relevant code repository or other location for a formal specification of the ... DataStandardOrTool not_relevant_to_dgps 0..1 Boolean Is the standard or tool currently relevant to DGPs? DataStandardOrTool id 1..1 Uriorcurie A unique identifier for a thing NamedThing category 0..1 CategoryType Name of the high level ontology class in which this entity is categorized NamedThing name 0..1 String A human-readable name for a thing NamedThing description 0..1 String A human-readable description for a thing NamedThing subclass_of 0..* NamedThing Holds between two classes where the domain class is a specialization of the r... NamedThing related_to 0..* NamedThing A relationship that is asserted between two named things NamedThing contributor_name 0..1 String The name of the person who added this node NamedThing contributor_github_name 0..1 String The name of the github user who added this node NamedThing contributor_orcid 0..1 Uriorcurie The ORCiD of the person who added this node NamedThing contribution_date 0..1 Date The date on which the node was added NamedThing","title":"Slots"},{"location":"OntologyOrVocabulary/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"OntologyOrVocabulary/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"OntologyOrVocabulary/#mappings","text":"Mapping Type Mapped Value self https://w3id.org/bridge2ai/standards-schema-all/:OntologyOrVocabulary native https://w3id.org/bridge2ai/standards-schema-all/:OntologyOrVocabulary","title":"Mappings"},{"location":"OntologyOrVocabulary/#linkml-source","text":"","title":"LinkML Source"},{"location":"OntologyOrVocabulary/#direct","text":"name: OntologyOrVocabulary description: A set of concepts and categories, potentially defined or accompanied by their hierarchical relationships. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: DataStandardOrTool","title":"Direct"},{"location":"OntologyOrVocabulary/#induced","text":"name: OntologyOrVocabulary description: A set of concepts and categories, potentially defined or accompanied by their hierarchical relationships. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: DataStandardOrTool attributes: collection: name: collection description: Tags for specific sets of standards. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing multivalued: true alias: collection owner: OntologyOrVocabulary domain_of: - DataStandardOrTool range: StandardsCollectionTag concerns_data_topic: name: concerns_data_topic description: Subject standard is generally applied in the context of object data topic. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: related_to domain: DataStandardOrTool multivalued: true inherited: true alias: concerns_data_topic owner: OntologyOrVocabulary domain_of: - DataStandardOrTool range: DataTopic has_relevant_organization: name: has_relevant_organization description: Subject standard is managed or otherwise guided buy the object organization(s). from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: related_to domain: DataStandardOrTool multivalued: true inherited: true alias: has_relevant_organization owner: OntologyOrVocabulary domain_of: - DataStandardOrTool range: Organization purpose_detail: name: purpose_detail description: Text description of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: purpose_detail owner: OntologyOrVocabulary domain_of: - DataStandardOrTool range: string is_open: name: is_open description: Is the standard or tool FAIR and available free of cost? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: is_open owner: OntologyOrVocabulary domain_of: - DataStandardOrTool range: boolean requires_registration: name: requires_registration description: Does usage of the standard or tool require registrion of a user or group with some organization or managerial body? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: requires_registration owner: OntologyOrVocabulary domain_of: - DataStandardOrTool range: boolean url: name: url description: URL for basic documentation of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: url owner: OntologyOrVocabulary domain_of: - DataStandardOrTool - Organization range: uriorcurie publication: name: publication description: Relevant publication for the standard or tool. Prefer a DOI or PUBMED. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: publication owner: OntologyOrVocabulary domain_of: - DataStandardOrTool range: uriorcurie formal_specification: name: formal_specification description: Relevant code repository or other location for a formal specification of the standard or tool. Often a URL, particularly to a Git repository. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: formal_specification owner: OntologyOrVocabulary domain_of: - DataStandardOrTool range: uriorcurie not_relevant_to_dgps: name: not_relevant_to_dgps description: Is the standard or tool currently relevant to DGPs? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: not_relevant_to_dgps owner: OntologyOrVocabulary domain_of: - DataStandardOrTool range: boolean id: name: id description: A unique identifier for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:identifier identifier: true alias: id owner: OntologyOrVocabulary domain_of: - NamedThing range: uriorcurie required: true category: name: category description: Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\". from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: type domain: NamedThing designates_type: true alias: category owner: OntologyOrVocabulary domain_of: - NamedThing range: category_type name: name: name description: A human-readable name for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:name alias: name owner: OntologyOrVocabulary domain_of: - NamedThing range: string description: name: description description: A human-readable description for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:description alias: description owner: OntologyOrVocabulary domain_of: - NamedThing range: string subclass_of: name: subclass_of description: Holds between two classes where the domain class is a specialization of the range class. from_schema: https://w3id.org/bridge2ai/standards-schema-all exact_mappings: - rdfs:subClassOf - MESH:isa narrow_mappings: - rdfs:subPropertyOf rank: 1000 is_a: related_to domain: NamedThing multivalued: true inherited: true alias: subclass_of owner: OntologyOrVocabulary domain_of: - NamedThing range: NamedThing related_to: name: related_to description: A relationship that is asserted between two named things. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 domain: NamedThing multivalued: true inherited: true alias: related_to owner: OntologyOrVocabulary domain_of: - NamedThing - Organization symmetric: true range: NamedThing contributor_name: name: contributor_name description: The name of the person who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_name owner: OntologyOrVocabulary domain_of: - NamedThing range: string contributor_github_name: name: contributor_github_name description: The name of the github user who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_github_name owner: OntologyOrVocabulary domain_of: - NamedThing range: string contributor_orcid: name: contributor_orcid description: The ORCiD of the person who added this node. examples: - value: ORCID:0000-0001-1234-5678 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_orcid owner: OntologyOrVocabulary domain_of: - NamedThing range: uriorcurie contribution_date: name: contribution_date description: The date on which the node was added. examples: - value: '2023-03-20' from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contribution_date owner: OntologyOrVocabulary domain_of: - NamedThing range: date","title":"Induced"},{"location":"Organization/","text":"Class: Organization Represents a group or organization related to or responsible for one or more Bridge2AI standards. URI: https://w3id.org/bridge2ai/standards-schema-all/:Organization classDiagram class Organization NamedThing <|-- Organization Organization : category Organization : contribution_date Organization : contributor_github_name Organization : contributor_name Organization : contributor_orcid Organization : description Organization : id Organization : name Organization : related_to Organization ..> NamedThing : related_to Organization : ror_id Organization : subclass_of Organization ..> NamedThing : subclass_of Organization : url Organization : wikidata_id Inheritance NamedThing Organization Slots Name Cardinality and Range Description Inheritance ror_id 0..1 RorIdentifier Unique ROR identifier direct wikidata_id 0..1 WikidataIdentifier Unique Wikidata identifier direct url 0..1 Uriorcurie URL for basic documentation of the standard or tool direct related_to 0..* NamedThing A relationship that is asserted between two named things direct id 1..1 Uriorcurie A unique identifier for a thing NamedThing category 0..1 CategoryType Name of the high level ontology class in which this entity is categorized NamedThing name 0..1 String A human-readable name for a thing NamedThing description 0..1 String A human-readable description for a thing NamedThing subclass_of 0..* NamedThing Holds between two classes where the domain class is a specialization of the r... NamedThing contributor_name 0..1 String The name of the person who added this node NamedThing contributor_github_name 0..1 String The name of the github user who added this node NamedThing contributor_orcid 0..1 Uriorcurie The ORCiD of the person who added this node NamedThing contribution_date 0..1 Date The date on which the node was added NamedThing Usages used by used in type used DataStandardOrTool has_relevant_organization range Organization DataStandard has_relevant_organization range Organization BiomedicalStandard has_relevant_organization range Organization Registry has_relevant_organization range Organization OntologyOrVocabulary has_relevant_organization range Organization ModelRepository has_relevant_organization range Organization ReferenceDataOrDataset has_relevant_organization range Organization SoftwareOrTool has_relevant_organization range Organization ReferenceImplementation has_relevant_organization range Organization TrainingProgram has_relevant_organization range Organization OrganizationContainer organizations range Organization Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all Mappings Mapping Type Mapped Value self https://w3id.org/bridge2ai/standards-schema-all/:Organization native https://w3id.org/bridge2ai/standards-schema-all/:Organization LinkML Source Direct name: Organization description: Represents a group or organization related to or responsible for one or more Bridge2AI standards. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: NamedThing slots: - ror_id - wikidata_id - url - related_to Induced name: Organization description: Represents a group or organization related to or responsible for one or more Bridge2AI standards. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: NamedThing attributes: ror_id: name: ror_id description: Unique ROR identifier. examples: - value: ROR:02mp31p96 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 values_from: - ROR alias: ror_id owner: Organization domain_of: - Organization range: ror_identifier wikidata_id: name: wikidata_id description: Unique Wikidata identifier. examples: - value: WIKIDATA:Q282186 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 values_from: - WIKIDATA alias: wikidata_id owner: Organization domain_of: - Organization range: wikidata_identifier url: name: url description: URL for basic documentation of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: url owner: Organization domain_of: - DataStandardOrTool - Organization range: uriorcurie related_to: name: related_to description: A relationship that is asserted between two named things. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 domain: NamedThing multivalued: true inherited: true alias: related_to owner: Organization domain_of: - NamedThing - Organization symmetric: true range: NamedThing id: name: id description: A unique identifier for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:identifier identifier: true alias: id owner: Organization domain_of: - NamedThing range: uriorcurie required: true category: name: category description: Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\". from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: type domain: NamedThing designates_type: true alias: category owner: Organization domain_of: - NamedThing range: category_type name: name: name description: A human-readable name for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:name alias: name owner: Organization domain_of: - NamedThing range: string description: name: description description: A human-readable description for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:description alias: description owner: Organization domain_of: - NamedThing range: string subclass_of: name: subclass_of description: Holds between two classes where the domain class is a specialization of the range class. from_schema: https://w3id.org/bridge2ai/standards-schema-all exact_mappings: - rdfs:subClassOf - MESH:isa narrow_mappings: - rdfs:subPropertyOf rank: 1000 is_a: related_to domain: NamedThing multivalued: true inherited: true alias: subclass_of owner: Organization domain_of: - NamedThing range: NamedThing contributor_name: name: contributor_name description: The name of the person who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_name owner: Organization domain_of: - NamedThing range: string contributor_github_name: name: contributor_github_name description: The name of the github user who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_github_name owner: Organization domain_of: - NamedThing range: string contributor_orcid: name: contributor_orcid description: The ORCiD of the person who added this node. examples: - value: ORCID:0000-0001-1234-5678 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_orcid owner: Organization domain_of: - NamedThing range: uriorcurie contribution_date: name: contribution_date description: The date on which the node was added. examples: - value: '2023-03-20' from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contribution_date owner: Organization domain_of: - NamedThing range: date","title":"Class: Organization"},{"location":"Organization/#class-organization","text":"Represents a group or organization related to or responsible for one or more Bridge2AI standards. URI: https://w3id.org/bridge2ai/standards-schema-all/:Organization classDiagram class Organization NamedThing <|-- Organization Organization : category Organization : contribution_date Organization : contributor_github_name Organization : contributor_name Organization : contributor_orcid Organization : description Organization : id Organization : name Organization : related_to Organization ..> NamedThing : related_to Organization : ror_id Organization : subclass_of Organization ..> NamedThing : subclass_of Organization : url Organization : wikidata_id","title":"Class: Organization"},{"location":"Organization/#inheritance","text":"NamedThing Organization","title":"Inheritance"},{"location":"Organization/#slots","text":"Name Cardinality and Range Description Inheritance ror_id 0..1 RorIdentifier Unique ROR identifier direct wikidata_id 0..1 WikidataIdentifier Unique Wikidata identifier direct url 0..1 Uriorcurie URL for basic documentation of the standard or tool direct related_to 0..* NamedThing A relationship that is asserted between two named things direct id 1..1 Uriorcurie A unique identifier for a thing NamedThing category 0..1 CategoryType Name of the high level ontology class in which this entity is categorized NamedThing name 0..1 String A human-readable name for a thing NamedThing description 0..1 String A human-readable description for a thing NamedThing subclass_of 0..* NamedThing Holds between two classes where the domain class is a specialization of the r... NamedThing contributor_name 0..1 String The name of the person who added this node NamedThing contributor_github_name 0..1 String The name of the github user who added this node NamedThing contributor_orcid 0..1 Uriorcurie The ORCiD of the person who added this node NamedThing contribution_date 0..1 Date The date on which the node was added NamedThing","title":"Slots"},{"location":"Organization/#usages","text":"used by used in type used DataStandardOrTool has_relevant_organization range Organization DataStandard has_relevant_organization range Organization BiomedicalStandard has_relevant_organization range Organization Registry has_relevant_organization range Organization OntologyOrVocabulary has_relevant_organization range Organization ModelRepository has_relevant_organization range Organization ReferenceDataOrDataset has_relevant_organization range Organization SoftwareOrTool has_relevant_organization range Organization ReferenceImplementation has_relevant_organization range Organization TrainingProgram has_relevant_organization range Organization OrganizationContainer organizations range Organization","title":"Usages"},{"location":"Organization/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Organization/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"Organization/#mappings","text":"Mapping Type Mapped Value self https://w3id.org/bridge2ai/standards-schema-all/:Organization native https://w3id.org/bridge2ai/standards-schema-all/:Organization","title":"Mappings"},{"location":"Organization/#linkml-source","text":"","title":"LinkML Source"},{"location":"Organization/#direct","text":"name: Organization description: Represents a group or organization related to or responsible for one or more Bridge2AI standards. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: NamedThing slots: - ror_id - wikidata_id - url - related_to","title":"Direct"},{"location":"Organization/#induced","text":"name: Organization description: Represents a group or organization related to or responsible for one or more Bridge2AI standards. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: NamedThing attributes: ror_id: name: ror_id description: Unique ROR identifier. examples: - value: ROR:02mp31p96 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 values_from: - ROR alias: ror_id owner: Organization domain_of: - Organization range: ror_identifier wikidata_id: name: wikidata_id description: Unique Wikidata identifier. examples: - value: WIKIDATA:Q282186 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 values_from: - WIKIDATA alias: wikidata_id owner: Organization domain_of: - Organization range: wikidata_identifier url: name: url description: URL for basic documentation of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: url owner: Organization domain_of: - DataStandardOrTool - Organization range: uriorcurie related_to: name: related_to description: A relationship that is asserted between two named things. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 domain: NamedThing multivalued: true inherited: true alias: related_to owner: Organization domain_of: - NamedThing - Organization symmetric: true range: NamedThing id: name: id description: A unique identifier for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:identifier identifier: true alias: id owner: Organization domain_of: - NamedThing range: uriorcurie required: true category: name: category description: Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\". from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: type domain: NamedThing designates_type: true alias: category owner: Organization domain_of: - NamedThing range: category_type name: name: name description: A human-readable name for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:name alias: name owner: Organization domain_of: - NamedThing range: string description: name: description description: A human-readable description for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:description alias: description owner: Organization domain_of: - NamedThing range: string subclass_of: name: subclass_of description: Holds between two classes where the domain class is a specialization of the range class. from_schema: https://w3id.org/bridge2ai/standards-schema-all exact_mappings: - rdfs:subClassOf - MESH:isa narrow_mappings: - rdfs:subPropertyOf rank: 1000 is_a: related_to domain: NamedThing multivalued: true inherited: true alias: subclass_of owner: Organization domain_of: - NamedThing range: NamedThing contributor_name: name: contributor_name description: The name of the person who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_name owner: Organization domain_of: - NamedThing range: string contributor_github_name: name: contributor_github_name description: The name of the github user who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_github_name owner: Organization domain_of: - NamedThing range: string contributor_orcid: name: contributor_orcid description: The ORCiD of the person who added this node. examples: - value: ORCID:0000-0001-1234-5678 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_orcid owner: Organization domain_of: - NamedThing range: uriorcurie contribution_date: name: contribution_date description: The date on which the node was added. examples: - value: '2023-03-20' from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contribution_date owner: Organization domain_of: - NamedThing range: date","title":"Induced"},{"location":"OrganizationContainer/","text":"Class: OrganizationContainer A container for Organizations. URI: https://w3id.org/bridge2ai/standards-schema-all/:OrganizationContainer classDiagram class OrganizationContainer OrganizationContainer : organizations OrganizationContainer ..> Organization : organizations Slots Name Cardinality and Range Description Inheritance organizations 0..* Organization Collection of associated organizations direct Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all Mappings Mapping Type Mapped Value self https://w3id.org/bridge2ai/standards-schema-all/:OrganizationContainer native https://w3id.org/bridge2ai/standards-schema-all/:OrganizationContainer LinkML Source Direct name: OrganizationContainer description: A container for Organizations. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slots: - organizations Induced name: OrganizationContainer description: A container for Organizations. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 attributes: organizations: name: organizations description: Collection of associated organizations. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 multivalued: true alias: organizations owner: OrganizationContainer domain_of: - OrganizationContainer range: Organization inlined: true inlined_as_list: true","title":"Class: OrganizationContainer"},{"location":"OrganizationContainer/#class-organizationcontainer","text":"A container for Organizations. URI: https://w3id.org/bridge2ai/standards-schema-all/:OrganizationContainer classDiagram class OrganizationContainer OrganizationContainer : organizations OrganizationContainer ..> Organization : organizations","title":"Class: OrganizationContainer"},{"location":"OrganizationContainer/#slots","text":"Name Cardinality and Range Description Inheritance organizations 0..* Organization Collection of associated organizations direct","title":"Slots"},{"location":"OrganizationContainer/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"OrganizationContainer/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"OrganizationContainer/#mappings","text":"Mapping Type Mapped Value self https://w3id.org/bridge2ai/standards-schema-all/:OrganizationContainer native https://w3id.org/bridge2ai/standards-schema-all/:OrganizationContainer","title":"Mappings"},{"location":"OrganizationContainer/#linkml-source","text":"","title":"LinkML Source"},{"location":"OrganizationContainer/#direct","text":"name: OrganizationContainer description: A container for Organizations. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slots: - organizations","title":"Direct"},{"location":"OrganizationContainer/#induced","text":"name: OrganizationContainer description: A container for Organizations. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 attributes: organizations: name: organizations description: Collection of associated organizations. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 multivalued: true alias: organizations owner: OrganizationContainer domain_of: - OrganizationContainer range: Organization inlined: true inlined_as_list: true","title":"Induced"},{"location":"ReferenceDataOrDataset/","text":"Class: ReferenceDataOrDataset Represents a resource in the Bridge2AI Standards Registry serving as a standardized, reusable data source. URI: https://w3id.org/bridge2ai/standards-schema-all/:ReferenceDataOrDataset classDiagram class ReferenceDataOrDataset DataStandardOrTool <|-- ReferenceDataOrDataset ReferenceDataOrDataset : category ReferenceDataOrDataset : collection ReferenceDataOrDataset ..> StandardsCollectionTag : collection ReferenceDataOrDataset : concerns_data_topic ReferenceDataOrDataset ..> DataTopic : concerns_data_topic ReferenceDataOrDataset : contribution_date ReferenceDataOrDataset : contributor_github_name ReferenceDataOrDataset : contributor_name ReferenceDataOrDataset : contributor_orcid ReferenceDataOrDataset : description ReferenceDataOrDataset : formal_specification ReferenceDataOrDataset : has_relevant_organization ReferenceDataOrDataset ..> Organization : has_relevant_organization ReferenceDataOrDataset : id ReferenceDataOrDataset : is_open ReferenceDataOrDataset : name ReferenceDataOrDataset : not_relevant_to_dgps ReferenceDataOrDataset : publication ReferenceDataOrDataset : purpose_detail ReferenceDataOrDataset : related_to ReferenceDataOrDataset ..> NamedThing : related_to ReferenceDataOrDataset : requires_registration ReferenceDataOrDataset : subclass_of ReferenceDataOrDataset ..> NamedThing : subclass_of ReferenceDataOrDataset : url Inheritance NamedThing DataStandardOrTool ReferenceDataOrDataset Slots Name Cardinality and Range Description Inheritance collection 0..* StandardsCollectionTag Tags for specific sets of standards DataStandardOrTool concerns_data_topic 0..* DataTopic Subject standard is generally applied in the context of object data topic DataStandardOrTool has_relevant_organization 0..* Organization Subject standard is managed or otherwise guided buy the object organization(s... DataStandardOrTool purpose_detail 0..1 String Text description of the standard or tool DataStandardOrTool is_open 0..1 Boolean Is the standard or tool FAIR and available free of cost? DataStandardOrTool requires_registration 0..1 Boolean Does usage of the standard or tool require registrion of a user or group with... DataStandardOrTool url 0..1 Uriorcurie URL for basic documentation of the standard or tool DataStandardOrTool publication 0..1 Uriorcurie Relevant publication for the standard or tool DataStandardOrTool formal_specification 0..1 Uriorcurie Relevant code repository or other location for a formal specification of the ... DataStandardOrTool not_relevant_to_dgps 0..1 Boolean Is the standard or tool currently relevant to DGPs? DataStandardOrTool id 1..1 Uriorcurie A unique identifier for a thing NamedThing category 0..1 CategoryType Name of the high level ontology class in which this entity is categorized NamedThing name 0..1 String A human-readable name for a thing NamedThing description 0..1 String A human-readable description for a thing NamedThing subclass_of 0..* NamedThing Holds between two classes where the domain class is a specialization of the r... NamedThing related_to 0..* NamedThing A relationship that is asserted between two named things NamedThing contributor_name 0..1 String The name of the person who added this node NamedThing contributor_github_name 0..1 String The name of the github user who added this node NamedThing contributor_orcid 0..1 Uriorcurie The ORCiD of the person who added this node NamedThing contribution_date 0..1 Date The date on which the node was added NamedThing Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all Mappings Mapping Type Mapped Value self https://w3id.org/bridge2ai/standards-schema-all/:ReferenceDataOrDataset native https://w3id.org/bridge2ai/standards-schema-all/:ReferenceDataOrDataset LinkML Source Direct name: ReferenceDataOrDataset description: Represents a resource in the Bridge2AI Standards Registry serving as a standardized, reusable data source. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: DataStandardOrTool Induced name: ReferenceDataOrDataset description: Represents a resource in the Bridge2AI Standards Registry serving as a standardized, reusable data source. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: DataStandardOrTool attributes: collection: name: collection description: Tags for specific sets of standards. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing multivalued: true alias: collection owner: ReferenceDataOrDataset domain_of: - DataStandardOrTool range: StandardsCollectionTag concerns_data_topic: name: concerns_data_topic description: Subject standard is generally applied in the context of object data topic. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: related_to domain: DataStandardOrTool multivalued: true inherited: true alias: concerns_data_topic owner: ReferenceDataOrDataset domain_of: - DataStandardOrTool range: DataTopic has_relevant_organization: name: has_relevant_organization description: Subject standard is managed or otherwise guided buy the object organization(s). from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: related_to domain: DataStandardOrTool multivalued: true inherited: true alias: has_relevant_organization owner: ReferenceDataOrDataset domain_of: - DataStandardOrTool range: Organization purpose_detail: name: purpose_detail description: Text description of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: purpose_detail owner: ReferenceDataOrDataset domain_of: - DataStandardOrTool range: string is_open: name: is_open description: Is the standard or tool FAIR and available free of cost? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: is_open owner: ReferenceDataOrDataset domain_of: - DataStandardOrTool range: boolean requires_registration: name: requires_registration description: Does usage of the standard or tool require registrion of a user or group with some organization or managerial body? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: requires_registration owner: ReferenceDataOrDataset domain_of: - DataStandardOrTool range: boolean url: name: url description: URL for basic documentation of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: url owner: ReferenceDataOrDataset domain_of: - DataStandardOrTool - Organization range: uriorcurie publication: name: publication description: Relevant publication for the standard or tool. Prefer a DOI or PUBMED. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: publication owner: ReferenceDataOrDataset domain_of: - DataStandardOrTool range: uriorcurie formal_specification: name: formal_specification description: Relevant code repository or other location for a formal specification of the standard or tool. Often a URL, particularly to a Git repository. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: formal_specification owner: ReferenceDataOrDataset domain_of: - DataStandardOrTool range: uriorcurie not_relevant_to_dgps: name: not_relevant_to_dgps description: Is the standard or tool currently relevant to DGPs? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: not_relevant_to_dgps owner: ReferenceDataOrDataset domain_of: - DataStandardOrTool range: boolean id: name: id description: A unique identifier for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:identifier identifier: true alias: id owner: ReferenceDataOrDataset domain_of: - NamedThing range: uriorcurie required: true category: name: category description: Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\". from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: type domain: NamedThing designates_type: true alias: category owner: ReferenceDataOrDataset domain_of: - NamedThing range: category_type name: name: name description: A human-readable name for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:name alias: name owner: ReferenceDataOrDataset domain_of: - NamedThing range: string description: name: description description: A human-readable description for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:description alias: description owner: ReferenceDataOrDataset domain_of: - NamedThing range: string subclass_of: name: subclass_of description: Holds between two classes where the domain class is a specialization of the range class. from_schema: https://w3id.org/bridge2ai/standards-schema-all exact_mappings: - rdfs:subClassOf - MESH:isa narrow_mappings: - rdfs:subPropertyOf rank: 1000 is_a: related_to domain: NamedThing multivalued: true inherited: true alias: subclass_of owner: ReferenceDataOrDataset domain_of: - NamedThing range: NamedThing related_to: name: related_to description: A relationship that is asserted between two named things. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 domain: NamedThing multivalued: true inherited: true alias: related_to owner: ReferenceDataOrDataset domain_of: - NamedThing - Organization symmetric: true range: NamedThing contributor_name: name: contributor_name description: The name of the person who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_name owner: ReferenceDataOrDataset domain_of: - NamedThing range: string contributor_github_name: name: contributor_github_name description: The name of the github user who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_github_name owner: ReferenceDataOrDataset domain_of: - NamedThing range: string contributor_orcid: name: contributor_orcid description: The ORCiD of the person who added this node. examples: - value: ORCID:0000-0001-1234-5678 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_orcid owner: ReferenceDataOrDataset domain_of: - NamedThing range: uriorcurie contribution_date: name: contribution_date description: The date on which the node was added. examples: - value: '2023-03-20' from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contribution_date owner: ReferenceDataOrDataset domain_of: - NamedThing range: date","title":"Class: ReferenceDataOrDataset"},{"location":"ReferenceDataOrDataset/#class-referencedataordataset","text":"Represents a resource in the Bridge2AI Standards Registry serving as a standardized, reusable data source. URI: https://w3id.org/bridge2ai/standards-schema-all/:ReferenceDataOrDataset classDiagram class ReferenceDataOrDataset DataStandardOrTool <|-- ReferenceDataOrDataset ReferenceDataOrDataset : category ReferenceDataOrDataset : collection ReferenceDataOrDataset ..> StandardsCollectionTag : collection ReferenceDataOrDataset : concerns_data_topic ReferenceDataOrDataset ..> DataTopic : concerns_data_topic ReferenceDataOrDataset : contribution_date ReferenceDataOrDataset : contributor_github_name ReferenceDataOrDataset : contributor_name ReferenceDataOrDataset : contributor_orcid ReferenceDataOrDataset : description ReferenceDataOrDataset : formal_specification ReferenceDataOrDataset : has_relevant_organization ReferenceDataOrDataset ..> Organization : has_relevant_organization ReferenceDataOrDataset : id ReferenceDataOrDataset : is_open ReferenceDataOrDataset : name ReferenceDataOrDataset : not_relevant_to_dgps ReferenceDataOrDataset : publication ReferenceDataOrDataset : purpose_detail ReferenceDataOrDataset : related_to ReferenceDataOrDataset ..> NamedThing : related_to ReferenceDataOrDataset : requires_registration ReferenceDataOrDataset : subclass_of ReferenceDataOrDataset ..> NamedThing : subclass_of ReferenceDataOrDataset : url","title":"Class: ReferenceDataOrDataset"},{"location":"ReferenceDataOrDataset/#inheritance","text":"NamedThing DataStandardOrTool ReferenceDataOrDataset","title":"Inheritance"},{"location":"ReferenceDataOrDataset/#slots","text":"Name Cardinality and Range Description Inheritance collection 0..* StandardsCollectionTag Tags for specific sets of standards DataStandardOrTool concerns_data_topic 0..* DataTopic Subject standard is generally applied in the context of object data topic DataStandardOrTool has_relevant_organization 0..* Organization Subject standard is managed or otherwise guided buy the object organization(s... DataStandardOrTool purpose_detail 0..1 String Text description of the standard or tool DataStandardOrTool is_open 0..1 Boolean Is the standard or tool FAIR and available free of cost? DataStandardOrTool requires_registration 0..1 Boolean Does usage of the standard or tool require registrion of a user or group with... DataStandardOrTool url 0..1 Uriorcurie URL for basic documentation of the standard or tool DataStandardOrTool publication 0..1 Uriorcurie Relevant publication for the standard or tool DataStandardOrTool formal_specification 0..1 Uriorcurie Relevant code repository or other location for a formal specification of the ... DataStandardOrTool not_relevant_to_dgps 0..1 Boolean Is the standard or tool currently relevant to DGPs? DataStandardOrTool id 1..1 Uriorcurie A unique identifier for a thing NamedThing category 0..1 CategoryType Name of the high level ontology class in which this entity is categorized NamedThing name 0..1 String A human-readable name for a thing NamedThing description 0..1 String A human-readable description for a thing NamedThing subclass_of 0..* NamedThing Holds between two classes where the domain class is a specialization of the r... NamedThing related_to 0..* NamedThing A relationship that is asserted between two named things NamedThing contributor_name 0..1 String The name of the person who added this node NamedThing contributor_github_name 0..1 String The name of the github user who added this node NamedThing contributor_orcid 0..1 Uriorcurie The ORCiD of the person who added this node NamedThing contribution_date 0..1 Date The date on which the node was added NamedThing","title":"Slots"},{"location":"ReferenceDataOrDataset/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"ReferenceDataOrDataset/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"ReferenceDataOrDataset/#mappings","text":"Mapping Type Mapped Value self https://w3id.org/bridge2ai/standards-schema-all/:ReferenceDataOrDataset native https://w3id.org/bridge2ai/standards-schema-all/:ReferenceDataOrDataset","title":"Mappings"},{"location":"ReferenceDataOrDataset/#linkml-source","text":"","title":"LinkML Source"},{"location":"ReferenceDataOrDataset/#direct","text":"name: ReferenceDataOrDataset description: Represents a resource in the Bridge2AI Standards Registry serving as a standardized, reusable data source. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: DataStandardOrTool","title":"Direct"},{"location":"ReferenceDataOrDataset/#induced","text":"name: ReferenceDataOrDataset description: Represents a resource in the Bridge2AI Standards Registry serving as a standardized, reusable data source. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: DataStandardOrTool attributes: collection: name: collection description: Tags for specific sets of standards. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing multivalued: true alias: collection owner: ReferenceDataOrDataset domain_of: - DataStandardOrTool range: StandardsCollectionTag concerns_data_topic: name: concerns_data_topic description: Subject standard is generally applied in the context of object data topic. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: related_to domain: DataStandardOrTool multivalued: true inherited: true alias: concerns_data_topic owner: ReferenceDataOrDataset domain_of: - DataStandardOrTool range: DataTopic has_relevant_organization: name: has_relevant_organization description: Subject standard is managed or otherwise guided buy the object organization(s). from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: related_to domain: DataStandardOrTool multivalued: true inherited: true alias: has_relevant_organization owner: ReferenceDataOrDataset domain_of: - DataStandardOrTool range: Organization purpose_detail: name: purpose_detail description: Text description of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: purpose_detail owner: ReferenceDataOrDataset domain_of: - DataStandardOrTool range: string is_open: name: is_open description: Is the standard or tool FAIR and available free of cost? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: is_open owner: ReferenceDataOrDataset domain_of: - DataStandardOrTool range: boolean requires_registration: name: requires_registration description: Does usage of the standard or tool require registrion of a user or group with some organization or managerial body? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: requires_registration owner: ReferenceDataOrDataset domain_of: - DataStandardOrTool range: boolean url: name: url description: URL for basic documentation of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: url owner: ReferenceDataOrDataset domain_of: - DataStandardOrTool - Organization range: uriorcurie publication: name: publication description: Relevant publication for the standard or tool. Prefer a DOI or PUBMED. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: publication owner: ReferenceDataOrDataset domain_of: - DataStandardOrTool range: uriorcurie formal_specification: name: formal_specification description: Relevant code repository or other location for a formal specification of the standard or tool. Often a URL, particularly to a Git repository. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: formal_specification owner: ReferenceDataOrDataset domain_of: - DataStandardOrTool range: uriorcurie not_relevant_to_dgps: name: not_relevant_to_dgps description: Is the standard or tool currently relevant to DGPs? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: not_relevant_to_dgps owner: ReferenceDataOrDataset domain_of: - DataStandardOrTool range: boolean id: name: id description: A unique identifier for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:identifier identifier: true alias: id owner: ReferenceDataOrDataset domain_of: - NamedThing range: uriorcurie required: true category: name: category description: Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\". from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: type domain: NamedThing designates_type: true alias: category owner: ReferenceDataOrDataset domain_of: - NamedThing range: category_type name: name: name description: A human-readable name for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:name alias: name owner: ReferenceDataOrDataset domain_of: - NamedThing range: string description: name: description description: A human-readable description for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:description alias: description owner: ReferenceDataOrDataset domain_of: - NamedThing range: string subclass_of: name: subclass_of description: Holds between two classes where the domain class is a specialization of the range class. from_schema: https://w3id.org/bridge2ai/standards-schema-all exact_mappings: - rdfs:subClassOf - MESH:isa narrow_mappings: - rdfs:subPropertyOf rank: 1000 is_a: related_to domain: NamedThing multivalued: true inherited: true alias: subclass_of owner: ReferenceDataOrDataset domain_of: - NamedThing range: NamedThing related_to: name: related_to description: A relationship that is asserted between two named things. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 domain: NamedThing multivalued: true inherited: true alias: related_to owner: ReferenceDataOrDataset domain_of: - NamedThing - Organization symmetric: true range: NamedThing contributor_name: name: contributor_name description: The name of the person who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_name owner: ReferenceDataOrDataset domain_of: - NamedThing range: string contributor_github_name: name: contributor_github_name description: The name of the github user who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_github_name owner: ReferenceDataOrDataset domain_of: - NamedThing range: string contributor_orcid: name: contributor_orcid description: The ORCiD of the person who added this node. examples: - value: ORCID:0000-0001-1234-5678 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_orcid owner: ReferenceDataOrDataset domain_of: - NamedThing range: uriorcurie contribution_date: name: contribution_date description: The date on which the node was added. examples: - value: '2023-03-20' from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contribution_date owner: ReferenceDataOrDataset domain_of: - NamedThing range: date","title":"Induced"},{"location":"ReferenceImplementation/","text":"Class: ReferenceImplementation Represents an implementation of one or more standards or tools in the Bridge2AI Standards Registry, whether as a full specification in a particular language or as an application to a specific use case. URI: https://w3id.org/bridge2ai/standards-schema-all/:ReferenceImplementation classDiagram class ReferenceImplementation DataStandardOrTool <|-- ReferenceImplementation ReferenceImplementation : category ReferenceImplementation : collection ReferenceImplementation ..> StandardsCollectionTag : collection ReferenceImplementation : concerns_data_topic ReferenceImplementation ..> DataTopic : concerns_data_topic ReferenceImplementation : contribution_date ReferenceImplementation : contributor_github_name ReferenceImplementation : contributor_name ReferenceImplementation : contributor_orcid ReferenceImplementation : description ReferenceImplementation : formal_specification ReferenceImplementation : has_relevant_organization ReferenceImplementation ..> Organization : has_relevant_organization ReferenceImplementation : id ReferenceImplementation : is_open ReferenceImplementation : name ReferenceImplementation : not_relevant_to_dgps ReferenceImplementation : publication ReferenceImplementation : purpose_detail ReferenceImplementation : related_to ReferenceImplementation ..> NamedThing : related_to ReferenceImplementation : requires_registration ReferenceImplementation : subclass_of ReferenceImplementation ..> NamedThing : subclass_of ReferenceImplementation : url Inheritance NamedThing DataStandardOrTool ReferenceImplementation Slots Name Cardinality and Range Description Inheritance collection 0..* StandardsCollectionTag Tags for specific sets of standards DataStandardOrTool concerns_data_topic 0..* DataTopic Subject standard is generally applied in the context of object data topic DataStandardOrTool has_relevant_organization 0..* Organization Subject standard is managed or otherwise guided buy the object organization(s... DataStandardOrTool purpose_detail 0..1 String Text description of the standard or tool DataStandardOrTool is_open 0..1 Boolean Is the standard or tool FAIR and available free of cost? DataStandardOrTool requires_registration 0..1 Boolean Does usage of the standard or tool require registrion of a user or group with... DataStandardOrTool url 0..1 Uriorcurie URL for basic documentation of the standard or tool DataStandardOrTool publication 0..1 Uriorcurie Relevant publication for the standard or tool DataStandardOrTool formal_specification 0..1 Uriorcurie Relevant code repository or other location for a formal specification of the ... DataStandardOrTool not_relevant_to_dgps 0..1 Boolean Is the standard or tool currently relevant to DGPs? DataStandardOrTool id 1..1 Uriorcurie A unique identifier for a thing NamedThing category 0..1 CategoryType Name of the high level ontology class in which this entity is categorized NamedThing name 0..1 String A human-readable name for a thing NamedThing description 0..1 String A human-readable description for a thing NamedThing subclass_of 0..* NamedThing Holds between two classes where the domain class is a specialization of the r... NamedThing related_to 0..* NamedThing A relationship that is asserted between two named things NamedThing contributor_name 0..1 String The name of the person who added this node NamedThing contributor_github_name 0..1 String The name of the github user who added this node NamedThing contributor_orcid 0..1 Uriorcurie The ORCiD of the person who added this node NamedThing contribution_date 0..1 Date The date on which the node was added NamedThing Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all Mappings Mapping Type Mapped Value self https://w3id.org/bridge2ai/standards-schema-all/:ReferenceImplementation native https://w3id.org/bridge2ai/standards-schema-all/:ReferenceImplementation LinkML Source Direct name: ReferenceImplementation description: Represents an implementation of one or more standards or tools in the Bridge2AI Standards Registry, whether as a full specification in a particular language or as an application to a specific use case. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: DataStandardOrTool Induced name: ReferenceImplementation description: Represents an implementation of one or more standards or tools in the Bridge2AI Standards Registry, whether as a full specification in a particular language or as an application to a specific use case. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: DataStandardOrTool attributes: collection: name: collection description: Tags for specific sets of standards. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing multivalued: true alias: collection owner: ReferenceImplementation domain_of: - DataStandardOrTool range: StandardsCollectionTag concerns_data_topic: name: concerns_data_topic description: Subject standard is generally applied in the context of object data topic. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: related_to domain: DataStandardOrTool multivalued: true inherited: true alias: concerns_data_topic owner: ReferenceImplementation domain_of: - DataStandardOrTool range: DataTopic has_relevant_organization: name: has_relevant_organization description: Subject standard is managed or otherwise guided buy the object organization(s). from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: related_to domain: DataStandardOrTool multivalued: true inherited: true alias: has_relevant_organization owner: ReferenceImplementation domain_of: - DataStandardOrTool range: Organization purpose_detail: name: purpose_detail description: Text description of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: purpose_detail owner: ReferenceImplementation domain_of: - DataStandardOrTool range: string is_open: name: is_open description: Is the standard or tool FAIR and available free of cost? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: is_open owner: ReferenceImplementation domain_of: - DataStandardOrTool range: boolean requires_registration: name: requires_registration description: Does usage of the standard or tool require registrion of a user or group with some organization or managerial body? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: requires_registration owner: ReferenceImplementation domain_of: - DataStandardOrTool range: boolean url: name: url description: URL for basic documentation of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: url owner: ReferenceImplementation domain_of: - DataStandardOrTool - Organization range: uriorcurie publication: name: publication description: Relevant publication for the standard or tool. Prefer a DOI or PUBMED. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: publication owner: ReferenceImplementation domain_of: - DataStandardOrTool range: uriorcurie formal_specification: name: formal_specification description: Relevant code repository or other location for a formal specification of the standard or tool. Often a URL, particularly to a Git repository. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: formal_specification owner: ReferenceImplementation domain_of: - DataStandardOrTool range: uriorcurie not_relevant_to_dgps: name: not_relevant_to_dgps description: Is the standard or tool currently relevant to DGPs? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: not_relevant_to_dgps owner: ReferenceImplementation domain_of: - DataStandardOrTool range: boolean id: name: id description: A unique identifier for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:identifier identifier: true alias: id owner: ReferenceImplementation domain_of: - NamedThing range: uriorcurie required: true category: name: category description: Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\". from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: type domain: NamedThing designates_type: true alias: category owner: ReferenceImplementation domain_of: - NamedThing range: category_type name: name: name description: A human-readable name for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:name alias: name owner: ReferenceImplementation domain_of: - NamedThing range: string description: name: description description: A human-readable description for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:description alias: description owner: ReferenceImplementation domain_of: - NamedThing range: string subclass_of: name: subclass_of description: Holds between two classes where the domain class is a specialization of the range class. from_schema: https://w3id.org/bridge2ai/standards-schema-all exact_mappings: - rdfs:subClassOf - MESH:isa narrow_mappings: - rdfs:subPropertyOf rank: 1000 is_a: related_to domain: NamedThing multivalued: true inherited: true alias: subclass_of owner: ReferenceImplementation domain_of: - NamedThing range: NamedThing related_to: name: related_to description: A relationship that is asserted between two named things. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 domain: NamedThing multivalued: true inherited: true alias: related_to owner: ReferenceImplementation domain_of: - NamedThing - Organization symmetric: true range: NamedThing contributor_name: name: contributor_name description: The name of the person who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_name owner: ReferenceImplementation domain_of: - NamedThing range: string contributor_github_name: name: contributor_github_name description: The name of the github user who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_github_name owner: ReferenceImplementation domain_of: - NamedThing range: string contributor_orcid: name: contributor_orcid description: The ORCiD of the person who added this node. examples: - value: ORCID:0000-0001-1234-5678 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_orcid owner: ReferenceImplementation domain_of: - NamedThing range: uriorcurie contribution_date: name: contribution_date description: The date on which the node was added. examples: - value: '2023-03-20' from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contribution_date owner: ReferenceImplementation domain_of: - NamedThing range: date","title":"Class: ReferenceImplementation"},{"location":"ReferenceImplementation/#class-referenceimplementation","text":"Represents an implementation of one or more standards or tools in the Bridge2AI Standards Registry, whether as a full specification in a particular language or as an application to a specific use case. URI: https://w3id.org/bridge2ai/standards-schema-all/:ReferenceImplementation classDiagram class ReferenceImplementation DataStandardOrTool <|-- ReferenceImplementation ReferenceImplementation : category ReferenceImplementation : collection ReferenceImplementation ..> StandardsCollectionTag : collection ReferenceImplementation : concerns_data_topic ReferenceImplementation ..> DataTopic : concerns_data_topic ReferenceImplementation : contribution_date ReferenceImplementation : contributor_github_name ReferenceImplementation : contributor_name ReferenceImplementation : contributor_orcid ReferenceImplementation : description ReferenceImplementation : formal_specification ReferenceImplementation : has_relevant_organization ReferenceImplementation ..> Organization : has_relevant_organization ReferenceImplementation : id ReferenceImplementation : is_open ReferenceImplementation : name ReferenceImplementation : not_relevant_to_dgps ReferenceImplementation : publication ReferenceImplementation : purpose_detail ReferenceImplementation : related_to ReferenceImplementation ..> NamedThing : related_to ReferenceImplementation : requires_registration ReferenceImplementation : subclass_of ReferenceImplementation ..> NamedThing : subclass_of ReferenceImplementation : url","title":"Class: ReferenceImplementation"},{"location":"ReferenceImplementation/#inheritance","text":"NamedThing DataStandardOrTool ReferenceImplementation","title":"Inheritance"},{"location":"ReferenceImplementation/#slots","text":"Name Cardinality and Range Description Inheritance collection 0..* StandardsCollectionTag Tags for specific sets of standards DataStandardOrTool concerns_data_topic 0..* DataTopic Subject standard is generally applied in the context of object data topic DataStandardOrTool has_relevant_organization 0..* Organization Subject standard is managed or otherwise guided buy the object organization(s... DataStandardOrTool purpose_detail 0..1 String Text description of the standard or tool DataStandardOrTool is_open 0..1 Boolean Is the standard or tool FAIR and available free of cost? DataStandardOrTool requires_registration 0..1 Boolean Does usage of the standard or tool require registrion of a user or group with... DataStandardOrTool url 0..1 Uriorcurie URL for basic documentation of the standard or tool DataStandardOrTool publication 0..1 Uriorcurie Relevant publication for the standard or tool DataStandardOrTool formal_specification 0..1 Uriorcurie Relevant code repository or other location for a formal specification of the ... DataStandardOrTool not_relevant_to_dgps 0..1 Boolean Is the standard or tool currently relevant to DGPs? DataStandardOrTool id 1..1 Uriorcurie A unique identifier for a thing NamedThing category 0..1 CategoryType Name of the high level ontology class in which this entity is categorized NamedThing name 0..1 String A human-readable name for a thing NamedThing description 0..1 String A human-readable description for a thing NamedThing subclass_of 0..* NamedThing Holds between two classes where the domain class is a specialization of the r... NamedThing related_to 0..* NamedThing A relationship that is asserted between two named things NamedThing contributor_name 0..1 String The name of the person who added this node NamedThing contributor_github_name 0..1 String The name of the github user who added this node NamedThing contributor_orcid 0..1 Uriorcurie The ORCiD of the person who added this node NamedThing contribution_date 0..1 Date The date on which the node was added NamedThing","title":"Slots"},{"location":"ReferenceImplementation/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"ReferenceImplementation/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"ReferenceImplementation/#mappings","text":"Mapping Type Mapped Value self https://w3id.org/bridge2ai/standards-schema-all/:ReferenceImplementation native https://w3id.org/bridge2ai/standards-schema-all/:ReferenceImplementation","title":"Mappings"},{"location":"ReferenceImplementation/#linkml-source","text":"","title":"LinkML Source"},{"location":"ReferenceImplementation/#direct","text":"name: ReferenceImplementation description: Represents an implementation of one or more standards or tools in the Bridge2AI Standards Registry, whether as a full specification in a particular language or as an application to a specific use case. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: DataStandardOrTool","title":"Direct"},{"location":"ReferenceImplementation/#induced","text":"name: ReferenceImplementation description: Represents an implementation of one or more standards or tools in the Bridge2AI Standards Registry, whether as a full specification in a particular language or as an application to a specific use case. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: DataStandardOrTool attributes: collection: name: collection description: Tags for specific sets of standards. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing multivalued: true alias: collection owner: ReferenceImplementation domain_of: - DataStandardOrTool range: StandardsCollectionTag concerns_data_topic: name: concerns_data_topic description: Subject standard is generally applied in the context of object data topic. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: related_to domain: DataStandardOrTool multivalued: true inherited: true alias: concerns_data_topic owner: ReferenceImplementation domain_of: - DataStandardOrTool range: DataTopic has_relevant_organization: name: has_relevant_organization description: Subject standard is managed or otherwise guided buy the object organization(s). from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: related_to domain: DataStandardOrTool multivalued: true inherited: true alias: has_relevant_organization owner: ReferenceImplementation domain_of: - DataStandardOrTool range: Organization purpose_detail: name: purpose_detail description: Text description of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: purpose_detail owner: ReferenceImplementation domain_of: - DataStandardOrTool range: string is_open: name: is_open description: Is the standard or tool FAIR and available free of cost? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: is_open owner: ReferenceImplementation domain_of: - DataStandardOrTool range: boolean requires_registration: name: requires_registration description: Does usage of the standard or tool require registrion of a user or group with some organization or managerial body? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: requires_registration owner: ReferenceImplementation domain_of: - DataStandardOrTool range: boolean url: name: url description: URL for basic documentation of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: url owner: ReferenceImplementation domain_of: - DataStandardOrTool - Organization range: uriorcurie publication: name: publication description: Relevant publication for the standard or tool. Prefer a DOI or PUBMED. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: publication owner: ReferenceImplementation domain_of: - DataStandardOrTool range: uriorcurie formal_specification: name: formal_specification description: Relevant code repository or other location for a formal specification of the standard or tool. Often a URL, particularly to a Git repository. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: formal_specification owner: ReferenceImplementation domain_of: - DataStandardOrTool range: uriorcurie not_relevant_to_dgps: name: not_relevant_to_dgps description: Is the standard or tool currently relevant to DGPs? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: not_relevant_to_dgps owner: ReferenceImplementation domain_of: - DataStandardOrTool range: boolean id: name: id description: A unique identifier for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:identifier identifier: true alias: id owner: ReferenceImplementation domain_of: - NamedThing range: uriorcurie required: true category: name: category description: Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\". from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: type domain: NamedThing designates_type: true alias: category owner: ReferenceImplementation domain_of: - NamedThing range: category_type name: name: name description: A human-readable name for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:name alias: name owner: ReferenceImplementation domain_of: - NamedThing range: string description: name: description description: A human-readable description for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:description alias: description owner: ReferenceImplementation domain_of: - NamedThing range: string subclass_of: name: subclass_of description: Holds between two classes where the domain class is a specialization of the range class. from_schema: https://w3id.org/bridge2ai/standards-schema-all exact_mappings: - rdfs:subClassOf - MESH:isa narrow_mappings: - rdfs:subPropertyOf rank: 1000 is_a: related_to domain: NamedThing multivalued: true inherited: true alias: subclass_of owner: ReferenceImplementation domain_of: - NamedThing range: NamedThing related_to: name: related_to description: A relationship that is asserted between two named things. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 domain: NamedThing multivalued: true inherited: true alias: related_to owner: ReferenceImplementation domain_of: - NamedThing - Organization symmetric: true range: NamedThing contributor_name: name: contributor_name description: The name of the person who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_name owner: ReferenceImplementation domain_of: - NamedThing range: string contributor_github_name: name: contributor_github_name description: The name of the github user who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_github_name owner: ReferenceImplementation domain_of: - NamedThing range: string contributor_orcid: name: contributor_orcid description: The ORCiD of the person who added this node. examples: - value: ORCID:0000-0001-1234-5678 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_orcid owner: ReferenceImplementation domain_of: - NamedThing range: uriorcurie contribution_date: name: contribution_date description: The date on which the node was added. examples: - value: '2023-03-20' from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contribution_date owner: ReferenceImplementation domain_of: - NamedThing range: date","title":"Induced"},{"location":"Registry/","text":"Class: Registry Represents a resource in the Bridge2AI Standards Registry serving to curate and/or index other resources. URI: https://w3id.org/bridge2ai/standards-schema-all/:Registry classDiagram class Registry DataStandardOrTool <|-- Registry Registry : category Registry : collection Registry ..> StandardsCollectionTag : collection Registry : concerns_data_topic Registry ..> DataTopic : concerns_data_topic Registry : contribution_date Registry : contributor_github_name Registry : contributor_name Registry : contributor_orcid Registry : description Registry : formal_specification Registry : has_relevant_organization Registry ..> Organization : has_relevant_organization Registry : id Registry : is_open Registry : name Registry : not_relevant_to_dgps Registry : publication Registry : purpose_detail Registry : related_to Registry ..> NamedThing : related_to Registry : requires_registration Registry : subclass_of Registry ..> NamedThing : subclass_of Registry : url Inheritance NamedThing DataStandardOrTool Registry Slots Name Cardinality and Range Description Inheritance collection 0..* StandardsCollectionTag Tags for specific sets of standards DataStandardOrTool concerns_data_topic 0..* DataTopic Subject standard is generally applied in the context of object data topic DataStandardOrTool has_relevant_organization 0..* Organization Subject standard is managed or otherwise guided buy the object organization(s... DataStandardOrTool purpose_detail 0..1 String Text description of the standard or tool DataStandardOrTool is_open 0..1 Boolean Is the standard or tool FAIR and available free of cost? DataStandardOrTool requires_registration 0..1 Boolean Does usage of the standard or tool require registrion of a user or group with... DataStandardOrTool url 0..1 Uriorcurie URL for basic documentation of the standard or tool DataStandardOrTool publication 0..1 Uriorcurie Relevant publication for the standard or tool DataStandardOrTool formal_specification 0..1 Uriorcurie Relevant code repository or other location for a formal specification of the ... DataStandardOrTool not_relevant_to_dgps 0..1 Boolean Is the standard or tool currently relevant to DGPs? DataStandardOrTool id 1..1 Uriorcurie A unique identifier for a thing NamedThing category 0..1 CategoryType Name of the high level ontology class in which this entity is categorized NamedThing name 0..1 String A human-readable name for a thing NamedThing description 0..1 String A human-readable description for a thing NamedThing subclass_of 0..* NamedThing Holds between two classes where the domain class is a specialization of the r... NamedThing related_to 0..* NamedThing A relationship that is asserted between two named things NamedThing contributor_name 0..1 String The name of the person who added this node NamedThing contributor_github_name 0..1 String The name of the github user who added this node NamedThing contributor_orcid 0..1 Uriorcurie The ORCiD of the person who added this node NamedThing contribution_date 0..1 Date The date on which the node was added NamedThing Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all Mappings Mapping Type Mapped Value self https://w3id.org/bridge2ai/standards-schema-all/:Registry native https://w3id.org/bridge2ai/standards-schema-all/:Registry LinkML Source Direct name: Registry description: Represents a resource in the Bridge2AI Standards Registry serving to curate and/or index other resources. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: DataStandardOrTool Induced name: Registry description: Represents a resource in the Bridge2AI Standards Registry serving to curate and/or index other resources. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: DataStandardOrTool attributes: collection: name: collection description: Tags for specific sets of standards. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing multivalued: true alias: collection owner: Registry domain_of: - DataStandardOrTool range: StandardsCollectionTag concerns_data_topic: name: concerns_data_topic description: Subject standard is generally applied in the context of object data topic. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: related_to domain: DataStandardOrTool multivalued: true inherited: true alias: concerns_data_topic owner: Registry domain_of: - DataStandardOrTool range: DataTopic has_relevant_organization: name: has_relevant_organization description: Subject standard is managed or otherwise guided buy the object organization(s). from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: related_to domain: DataStandardOrTool multivalued: true inherited: true alias: has_relevant_organization owner: Registry domain_of: - DataStandardOrTool range: Organization purpose_detail: name: purpose_detail description: Text description of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: purpose_detail owner: Registry domain_of: - DataStandardOrTool range: string is_open: name: is_open description: Is the standard or tool FAIR and available free of cost? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: is_open owner: Registry domain_of: - DataStandardOrTool range: boolean requires_registration: name: requires_registration description: Does usage of the standard or tool require registrion of a user or group with some organization or managerial body? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: requires_registration owner: Registry domain_of: - DataStandardOrTool range: boolean url: name: url description: URL for basic documentation of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: url owner: Registry domain_of: - DataStandardOrTool - Organization range: uriorcurie publication: name: publication description: Relevant publication for the standard or tool. Prefer a DOI or PUBMED. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: publication owner: Registry domain_of: - DataStandardOrTool range: uriorcurie formal_specification: name: formal_specification description: Relevant code repository or other location for a formal specification of the standard or tool. Often a URL, particularly to a Git repository. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: formal_specification owner: Registry domain_of: - DataStandardOrTool range: uriorcurie not_relevant_to_dgps: name: not_relevant_to_dgps description: Is the standard or tool currently relevant to DGPs? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: not_relevant_to_dgps owner: Registry domain_of: - DataStandardOrTool range: boolean id: name: id description: A unique identifier for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:identifier identifier: true alias: id owner: Registry domain_of: - NamedThing range: uriorcurie required: true category: name: category description: Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\". from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: type domain: NamedThing designates_type: true alias: category owner: Registry domain_of: - NamedThing range: category_type name: name: name description: A human-readable name for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:name alias: name owner: Registry domain_of: - NamedThing range: string description: name: description description: A human-readable description for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:description alias: description owner: Registry domain_of: - NamedThing range: string subclass_of: name: subclass_of description: Holds between two classes where the domain class is a specialization of the range class. from_schema: https://w3id.org/bridge2ai/standards-schema-all exact_mappings: - rdfs:subClassOf - MESH:isa narrow_mappings: - rdfs:subPropertyOf rank: 1000 is_a: related_to domain: NamedThing multivalued: true inherited: true alias: subclass_of owner: Registry domain_of: - NamedThing range: NamedThing related_to: name: related_to description: A relationship that is asserted between two named things. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 domain: NamedThing multivalued: true inherited: true alias: related_to owner: Registry domain_of: - NamedThing - Organization symmetric: true range: NamedThing contributor_name: name: contributor_name description: The name of the person who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_name owner: Registry domain_of: - NamedThing range: string contributor_github_name: name: contributor_github_name description: The name of the github user who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_github_name owner: Registry domain_of: - NamedThing range: string contributor_orcid: name: contributor_orcid description: The ORCiD of the person who added this node. examples: - value: ORCID:0000-0001-1234-5678 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_orcid owner: Registry domain_of: - NamedThing range: uriorcurie contribution_date: name: contribution_date description: The date on which the node was added. examples: - value: '2023-03-20' from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contribution_date owner: Registry domain_of: - NamedThing range: date","title":"Class: Registry"},{"location":"Registry/#class-registry","text":"Represents a resource in the Bridge2AI Standards Registry serving to curate and/or index other resources. URI: https://w3id.org/bridge2ai/standards-schema-all/:Registry classDiagram class Registry DataStandardOrTool <|-- Registry Registry : category Registry : collection Registry ..> StandardsCollectionTag : collection Registry : concerns_data_topic Registry ..> DataTopic : concerns_data_topic Registry : contribution_date Registry : contributor_github_name Registry : contributor_name Registry : contributor_orcid Registry : description Registry : formal_specification Registry : has_relevant_organization Registry ..> Organization : has_relevant_organization Registry : id Registry : is_open Registry : name Registry : not_relevant_to_dgps Registry : publication Registry : purpose_detail Registry : related_to Registry ..> NamedThing : related_to Registry : requires_registration Registry : subclass_of Registry ..> NamedThing : subclass_of Registry : url","title":"Class: Registry"},{"location":"Registry/#inheritance","text":"NamedThing DataStandardOrTool Registry","title":"Inheritance"},{"location":"Registry/#slots","text":"Name Cardinality and Range Description Inheritance collection 0..* StandardsCollectionTag Tags for specific sets of standards DataStandardOrTool concerns_data_topic 0..* DataTopic Subject standard is generally applied in the context of object data topic DataStandardOrTool has_relevant_organization 0..* Organization Subject standard is managed or otherwise guided buy the object organization(s... DataStandardOrTool purpose_detail 0..1 String Text description of the standard or tool DataStandardOrTool is_open 0..1 Boolean Is the standard or tool FAIR and available free of cost? DataStandardOrTool requires_registration 0..1 Boolean Does usage of the standard or tool require registrion of a user or group with... DataStandardOrTool url 0..1 Uriorcurie URL for basic documentation of the standard or tool DataStandardOrTool publication 0..1 Uriorcurie Relevant publication for the standard or tool DataStandardOrTool formal_specification 0..1 Uriorcurie Relevant code repository or other location for a formal specification of the ... DataStandardOrTool not_relevant_to_dgps 0..1 Boolean Is the standard or tool currently relevant to DGPs? DataStandardOrTool id 1..1 Uriorcurie A unique identifier for a thing NamedThing category 0..1 CategoryType Name of the high level ontology class in which this entity is categorized NamedThing name 0..1 String A human-readable name for a thing NamedThing description 0..1 String A human-readable description for a thing NamedThing subclass_of 0..* NamedThing Holds between two classes where the domain class is a specialization of the r... NamedThing related_to 0..* NamedThing A relationship that is asserted between two named things NamedThing contributor_name 0..1 String The name of the person who added this node NamedThing contributor_github_name 0..1 String The name of the github user who added this node NamedThing contributor_orcid 0..1 Uriorcurie The ORCiD of the person who added this node NamedThing contribution_date 0..1 Date The date on which the node was added NamedThing","title":"Slots"},{"location":"Registry/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Registry/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"Registry/#mappings","text":"Mapping Type Mapped Value self https://w3id.org/bridge2ai/standards-schema-all/:Registry native https://w3id.org/bridge2ai/standards-schema-all/:Registry","title":"Mappings"},{"location":"Registry/#linkml-source","text":"","title":"LinkML Source"},{"location":"Registry/#direct","text":"name: Registry description: Represents a resource in the Bridge2AI Standards Registry serving to curate and/or index other resources. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: DataStandardOrTool","title":"Direct"},{"location":"Registry/#induced","text":"name: Registry description: Represents a resource in the Bridge2AI Standards Registry serving to curate and/or index other resources. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: DataStandardOrTool attributes: collection: name: collection description: Tags for specific sets of standards. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing multivalued: true alias: collection owner: Registry domain_of: - DataStandardOrTool range: StandardsCollectionTag concerns_data_topic: name: concerns_data_topic description: Subject standard is generally applied in the context of object data topic. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: related_to domain: DataStandardOrTool multivalued: true inherited: true alias: concerns_data_topic owner: Registry domain_of: - DataStandardOrTool range: DataTopic has_relevant_organization: name: has_relevant_organization description: Subject standard is managed or otherwise guided buy the object organization(s). from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: related_to domain: DataStandardOrTool multivalued: true inherited: true alias: has_relevant_organization owner: Registry domain_of: - DataStandardOrTool range: Organization purpose_detail: name: purpose_detail description: Text description of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: purpose_detail owner: Registry domain_of: - DataStandardOrTool range: string is_open: name: is_open description: Is the standard or tool FAIR and available free of cost? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: is_open owner: Registry domain_of: - DataStandardOrTool range: boolean requires_registration: name: requires_registration description: Does usage of the standard or tool require registrion of a user or group with some organization or managerial body? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: requires_registration owner: Registry domain_of: - DataStandardOrTool range: boolean url: name: url description: URL for basic documentation of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: url owner: Registry domain_of: - DataStandardOrTool - Organization range: uriorcurie publication: name: publication description: Relevant publication for the standard or tool. Prefer a DOI or PUBMED. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: publication owner: Registry domain_of: - DataStandardOrTool range: uriorcurie formal_specification: name: formal_specification description: Relevant code repository or other location for a formal specification of the standard or tool. Often a URL, particularly to a Git repository. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: formal_specification owner: Registry domain_of: - DataStandardOrTool range: uriorcurie not_relevant_to_dgps: name: not_relevant_to_dgps description: Is the standard or tool currently relevant to DGPs? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: not_relevant_to_dgps owner: Registry domain_of: - DataStandardOrTool range: boolean id: name: id description: A unique identifier for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:identifier identifier: true alias: id owner: Registry domain_of: - NamedThing range: uriorcurie required: true category: name: category description: Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\". from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: type domain: NamedThing designates_type: true alias: category owner: Registry domain_of: - NamedThing range: category_type name: name: name description: A human-readable name for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:name alias: name owner: Registry domain_of: - NamedThing range: string description: name: description description: A human-readable description for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:description alias: description owner: Registry domain_of: - NamedThing range: string subclass_of: name: subclass_of description: Holds between two classes where the domain class is a specialization of the range class. from_schema: https://w3id.org/bridge2ai/standards-schema-all exact_mappings: - rdfs:subClassOf - MESH:isa narrow_mappings: - rdfs:subPropertyOf rank: 1000 is_a: related_to domain: NamedThing multivalued: true inherited: true alias: subclass_of owner: Registry domain_of: - NamedThing range: NamedThing related_to: name: related_to description: A relationship that is asserted between two named things. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 domain: NamedThing multivalued: true inherited: true alias: related_to owner: Registry domain_of: - NamedThing - Organization symmetric: true range: NamedThing contributor_name: name: contributor_name description: The name of the person who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_name owner: Registry domain_of: - NamedThing range: string contributor_github_name: name: contributor_github_name description: The name of the github user who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_github_name owner: Registry domain_of: - NamedThing range: string contributor_orcid: name: contributor_orcid description: The ORCiD of the person who added this node. examples: - value: ORCID:0000-0001-1234-5678 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_orcid owner: Registry domain_of: - NamedThing range: uriorcurie contribution_date: name: contribution_date description: The date on which the node was added. examples: - value: '2023-03-20' from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contribution_date owner: Registry domain_of: - NamedThing range: date","title":"Induced"},{"location":"RorIdentifier/","text":"Type: RorIdentifier Identifier from Research Organization Registry. URI: xsd:anyURI base : URIorCURIE uri : xsd:anyURI repr : str typeof : uriorcurie Identifier and Mapping Information Valid ID Prefixes Instances of this class should have identifiers with one of the following prefixes: ror Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Type: RorIdentifier"},{"location":"RorIdentifier/#type-roridentifier","text":"Identifier from Research Organization Registry. URI: xsd:anyURI base : URIorCURIE uri : xsd:anyURI repr : str typeof : uriorcurie","title":"Type: RorIdentifier"},{"location":"RorIdentifier/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"RorIdentifier/#valid-id-prefixes","text":"Instances of this class should have identifiers with one of the following prefixes: ror","title":"Valid ID Prefixes"},{"location":"RorIdentifier/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"SoftwareOrTool/","text":"Class: SoftwareOrTool Represents a piece of software or computational tool in the Bridge2AI Standards Registry. URI: https://w3id.org/bridge2ai/standards-schema-all/:SoftwareOrTool classDiagram class SoftwareOrTool DataStandardOrTool <|-- SoftwareOrTool SoftwareOrTool : category SoftwareOrTool : collection SoftwareOrTool ..> StandardsCollectionTag : collection SoftwareOrTool : concerns_data_topic SoftwareOrTool ..> DataTopic : concerns_data_topic SoftwareOrTool : contribution_date SoftwareOrTool : contributor_github_name SoftwareOrTool : contributor_name SoftwareOrTool : contributor_orcid SoftwareOrTool : description SoftwareOrTool : formal_specification SoftwareOrTool : has_relevant_organization SoftwareOrTool ..> Organization : has_relevant_organization SoftwareOrTool : id SoftwareOrTool : is_open SoftwareOrTool : name SoftwareOrTool : not_relevant_to_dgps SoftwareOrTool : publication SoftwareOrTool : purpose_detail SoftwareOrTool : related_to SoftwareOrTool ..> NamedThing : related_to SoftwareOrTool : requires_registration SoftwareOrTool : subclass_of SoftwareOrTool ..> NamedThing : subclass_of SoftwareOrTool : url Inheritance NamedThing DataStandardOrTool SoftwareOrTool Slots Name Cardinality and Range Description Inheritance collection 0..* StandardsCollectionTag Tags for specific sets of standards DataStandardOrTool concerns_data_topic 0..* DataTopic Subject standard is generally applied in the context of object data topic DataStandardOrTool has_relevant_organization 0..* Organization Subject standard is managed or otherwise guided buy the object organization(s... DataStandardOrTool purpose_detail 0..1 String Text description of the standard or tool DataStandardOrTool is_open 0..1 Boolean Is the standard or tool FAIR and available free of cost? DataStandardOrTool requires_registration 0..1 Boolean Does usage of the standard or tool require registrion of a user or group with... DataStandardOrTool url 0..1 Uriorcurie URL for basic documentation of the standard or tool DataStandardOrTool publication 0..1 Uriorcurie Relevant publication for the standard or tool DataStandardOrTool formal_specification 0..1 Uriorcurie Relevant code repository or other location for a formal specification of the ... DataStandardOrTool not_relevant_to_dgps 0..1 Boolean Is the standard or tool currently relevant to DGPs? DataStandardOrTool id 1..1 Uriorcurie A unique identifier for a thing NamedThing category 0..1 CategoryType Name of the high level ontology class in which this entity is categorized NamedThing name 0..1 String A human-readable name for a thing NamedThing description 0..1 String A human-readable description for a thing NamedThing subclass_of 0..* NamedThing Holds between two classes where the domain class is a specialization of the r... NamedThing related_to 0..* NamedThing A relationship that is asserted between two named things NamedThing contributor_name 0..1 String The name of the person who added this node NamedThing contributor_github_name 0..1 String The name of the github user who added this node NamedThing contributor_orcid 0..1 Uriorcurie The ORCiD of the person who added this node NamedThing contribution_date 0..1 Date The date on which the node was added NamedThing Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all Mappings Mapping Type Mapped Value self https://w3id.org/bridge2ai/standards-schema-all/:SoftwareOrTool native https://w3id.org/bridge2ai/standards-schema-all/:SoftwareOrTool LinkML Source Direct name: SoftwareOrTool description: Represents a piece of software or computational tool in the Bridge2AI Standards Registry. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: DataStandardOrTool Induced name: SoftwareOrTool description: Represents a piece of software or computational tool in the Bridge2AI Standards Registry. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: DataStandardOrTool attributes: collection: name: collection description: Tags for specific sets of standards. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing multivalued: true alias: collection owner: SoftwareOrTool domain_of: - DataStandardOrTool range: StandardsCollectionTag concerns_data_topic: name: concerns_data_topic description: Subject standard is generally applied in the context of object data topic. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: related_to domain: DataStandardOrTool multivalued: true inherited: true alias: concerns_data_topic owner: SoftwareOrTool domain_of: - DataStandardOrTool range: DataTopic has_relevant_organization: name: has_relevant_organization description: Subject standard is managed or otherwise guided buy the object organization(s). from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: related_to domain: DataStandardOrTool multivalued: true inherited: true alias: has_relevant_organization owner: SoftwareOrTool domain_of: - DataStandardOrTool range: Organization purpose_detail: name: purpose_detail description: Text description of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: purpose_detail owner: SoftwareOrTool domain_of: - DataStandardOrTool range: string is_open: name: is_open description: Is the standard or tool FAIR and available free of cost? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: is_open owner: SoftwareOrTool domain_of: - DataStandardOrTool range: boolean requires_registration: name: requires_registration description: Does usage of the standard or tool require registrion of a user or group with some organization or managerial body? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: requires_registration owner: SoftwareOrTool domain_of: - DataStandardOrTool range: boolean url: name: url description: URL for basic documentation of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: url owner: SoftwareOrTool domain_of: - DataStandardOrTool - Organization range: uriorcurie publication: name: publication description: Relevant publication for the standard or tool. Prefer a DOI or PUBMED. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: publication owner: SoftwareOrTool domain_of: - DataStandardOrTool range: uriorcurie formal_specification: name: formal_specification description: Relevant code repository or other location for a formal specification of the standard or tool. Often a URL, particularly to a Git repository. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: formal_specification owner: SoftwareOrTool domain_of: - DataStandardOrTool range: uriorcurie not_relevant_to_dgps: name: not_relevant_to_dgps description: Is the standard or tool currently relevant to DGPs? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: not_relevant_to_dgps owner: SoftwareOrTool domain_of: - DataStandardOrTool range: boolean id: name: id description: A unique identifier for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:identifier identifier: true alias: id owner: SoftwareOrTool domain_of: - NamedThing range: uriorcurie required: true category: name: category description: Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\". from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: type domain: NamedThing designates_type: true alias: category owner: SoftwareOrTool domain_of: - NamedThing range: category_type name: name: name description: A human-readable name for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:name alias: name owner: SoftwareOrTool domain_of: - NamedThing range: string description: name: description description: A human-readable description for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:description alias: description owner: SoftwareOrTool domain_of: - NamedThing range: string subclass_of: name: subclass_of description: Holds between two classes where the domain class is a specialization of the range class. from_schema: https://w3id.org/bridge2ai/standards-schema-all exact_mappings: - rdfs:subClassOf - MESH:isa narrow_mappings: - rdfs:subPropertyOf rank: 1000 is_a: related_to domain: NamedThing multivalued: true inherited: true alias: subclass_of owner: SoftwareOrTool domain_of: - NamedThing range: NamedThing related_to: name: related_to description: A relationship that is asserted between two named things. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 domain: NamedThing multivalued: true inherited: true alias: related_to owner: SoftwareOrTool domain_of: - NamedThing - Organization symmetric: true range: NamedThing contributor_name: name: contributor_name description: The name of the person who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_name owner: SoftwareOrTool domain_of: - NamedThing range: string contributor_github_name: name: contributor_github_name description: The name of the github user who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_github_name owner: SoftwareOrTool domain_of: - NamedThing range: string contributor_orcid: name: contributor_orcid description: The ORCiD of the person who added this node. examples: - value: ORCID:0000-0001-1234-5678 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_orcid owner: SoftwareOrTool domain_of: - NamedThing range: uriorcurie contribution_date: name: contribution_date description: The date on which the node was added. examples: - value: '2023-03-20' from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contribution_date owner: SoftwareOrTool domain_of: - NamedThing range: date","title":"Class: SoftwareOrTool"},{"location":"SoftwareOrTool/#class-softwareortool","text":"Represents a piece of software or computational tool in the Bridge2AI Standards Registry. URI: https://w3id.org/bridge2ai/standards-schema-all/:SoftwareOrTool classDiagram class SoftwareOrTool DataStandardOrTool <|-- SoftwareOrTool SoftwareOrTool : category SoftwareOrTool : collection SoftwareOrTool ..> StandardsCollectionTag : collection SoftwareOrTool : concerns_data_topic SoftwareOrTool ..> DataTopic : concerns_data_topic SoftwareOrTool : contribution_date SoftwareOrTool : contributor_github_name SoftwareOrTool : contributor_name SoftwareOrTool : contributor_orcid SoftwareOrTool : description SoftwareOrTool : formal_specification SoftwareOrTool : has_relevant_organization SoftwareOrTool ..> Organization : has_relevant_organization SoftwareOrTool : id SoftwareOrTool : is_open SoftwareOrTool : name SoftwareOrTool : not_relevant_to_dgps SoftwareOrTool : publication SoftwareOrTool : purpose_detail SoftwareOrTool : related_to SoftwareOrTool ..> NamedThing : related_to SoftwareOrTool : requires_registration SoftwareOrTool : subclass_of SoftwareOrTool ..> NamedThing : subclass_of SoftwareOrTool : url","title":"Class: SoftwareOrTool"},{"location":"SoftwareOrTool/#inheritance","text":"NamedThing DataStandardOrTool SoftwareOrTool","title":"Inheritance"},{"location":"SoftwareOrTool/#slots","text":"Name Cardinality and Range Description Inheritance collection 0..* StandardsCollectionTag Tags for specific sets of standards DataStandardOrTool concerns_data_topic 0..* DataTopic Subject standard is generally applied in the context of object data topic DataStandardOrTool has_relevant_organization 0..* Organization Subject standard is managed or otherwise guided buy the object organization(s... DataStandardOrTool purpose_detail 0..1 String Text description of the standard or tool DataStandardOrTool is_open 0..1 Boolean Is the standard or tool FAIR and available free of cost? DataStandardOrTool requires_registration 0..1 Boolean Does usage of the standard or tool require registrion of a user or group with... DataStandardOrTool url 0..1 Uriorcurie URL for basic documentation of the standard or tool DataStandardOrTool publication 0..1 Uriorcurie Relevant publication for the standard or tool DataStandardOrTool formal_specification 0..1 Uriorcurie Relevant code repository or other location for a formal specification of the ... DataStandardOrTool not_relevant_to_dgps 0..1 Boolean Is the standard or tool currently relevant to DGPs? DataStandardOrTool id 1..1 Uriorcurie A unique identifier for a thing NamedThing category 0..1 CategoryType Name of the high level ontology class in which this entity is categorized NamedThing name 0..1 String A human-readable name for a thing NamedThing description 0..1 String A human-readable description for a thing NamedThing subclass_of 0..* NamedThing Holds between two classes where the domain class is a specialization of the r... NamedThing related_to 0..* NamedThing A relationship that is asserted between two named things NamedThing contributor_name 0..1 String The name of the person who added this node NamedThing contributor_github_name 0..1 String The name of the github user who added this node NamedThing contributor_orcid 0..1 Uriorcurie The ORCiD of the person who added this node NamedThing contribution_date 0..1 Date The date on which the node was added NamedThing","title":"Slots"},{"location":"SoftwareOrTool/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"SoftwareOrTool/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"SoftwareOrTool/#mappings","text":"Mapping Type Mapped Value self https://w3id.org/bridge2ai/standards-schema-all/:SoftwareOrTool native https://w3id.org/bridge2ai/standards-schema-all/:SoftwareOrTool","title":"Mappings"},{"location":"SoftwareOrTool/#linkml-source","text":"","title":"LinkML Source"},{"location":"SoftwareOrTool/#direct","text":"name: SoftwareOrTool description: Represents a piece of software or computational tool in the Bridge2AI Standards Registry. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: DataStandardOrTool","title":"Direct"},{"location":"SoftwareOrTool/#induced","text":"name: SoftwareOrTool description: Represents a piece of software or computational tool in the Bridge2AI Standards Registry. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: DataStandardOrTool attributes: collection: name: collection description: Tags for specific sets of standards. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing multivalued: true alias: collection owner: SoftwareOrTool domain_of: - DataStandardOrTool range: StandardsCollectionTag concerns_data_topic: name: concerns_data_topic description: Subject standard is generally applied in the context of object data topic. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: related_to domain: DataStandardOrTool multivalued: true inherited: true alias: concerns_data_topic owner: SoftwareOrTool domain_of: - DataStandardOrTool range: DataTopic has_relevant_organization: name: has_relevant_organization description: Subject standard is managed or otherwise guided buy the object organization(s). from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: related_to domain: DataStandardOrTool multivalued: true inherited: true alias: has_relevant_organization owner: SoftwareOrTool domain_of: - DataStandardOrTool range: Organization purpose_detail: name: purpose_detail description: Text description of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: purpose_detail owner: SoftwareOrTool domain_of: - DataStandardOrTool range: string is_open: name: is_open description: Is the standard or tool FAIR and available free of cost? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: is_open owner: SoftwareOrTool domain_of: - DataStandardOrTool range: boolean requires_registration: name: requires_registration description: Does usage of the standard or tool require registrion of a user or group with some organization or managerial body? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: requires_registration owner: SoftwareOrTool domain_of: - DataStandardOrTool range: boolean url: name: url description: URL for basic documentation of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: url owner: SoftwareOrTool domain_of: - DataStandardOrTool - Organization range: uriorcurie publication: name: publication description: Relevant publication for the standard or tool. Prefer a DOI or PUBMED. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: publication owner: SoftwareOrTool domain_of: - DataStandardOrTool range: uriorcurie formal_specification: name: formal_specification description: Relevant code repository or other location for a formal specification of the standard or tool. Often a URL, particularly to a Git repository. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: formal_specification owner: SoftwareOrTool domain_of: - DataStandardOrTool range: uriorcurie not_relevant_to_dgps: name: not_relevant_to_dgps description: Is the standard or tool currently relevant to DGPs? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: not_relevant_to_dgps owner: SoftwareOrTool domain_of: - DataStandardOrTool range: boolean id: name: id description: A unique identifier for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:identifier identifier: true alias: id owner: SoftwareOrTool domain_of: - NamedThing range: uriorcurie required: true category: name: category description: Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\". from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: type domain: NamedThing designates_type: true alias: category owner: SoftwareOrTool domain_of: - NamedThing range: category_type name: name: name description: A human-readable name for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:name alias: name owner: SoftwareOrTool domain_of: - NamedThing range: string description: name: description description: A human-readable description for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:description alias: description owner: SoftwareOrTool domain_of: - NamedThing range: string subclass_of: name: subclass_of description: Holds between two classes where the domain class is a specialization of the range class. from_schema: https://w3id.org/bridge2ai/standards-schema-all exact_mappings: - rdfs:subClassOf - MESH:isa narrow_mappings: - rdfs:subPropertyOf rank: 1000 is_a: related_to domain: NamedThing multivalued: true inherited: true alias: subclass_of owner: SoftwareOrTool domain_of: - NamedThing range: NamedThing related_to: name: related_to description: A relationship that is asserted between two named things. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 domain: NamedThing multivalued: true inherited: true alias: related_to owner: SoftwareOrTool domain_of: - NamedThing - Organization symmetric: true range: NamedThing contributor_name: name: contributor_name description: The name of the person who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_name owner: SoftwareOrTool domain_of: - NamedThing range: string contributor_github_name: name: contributor_github_name description: The name of the github user who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_github_name owner: SoftwareOrTool domain_of: - NamedThing range: string contributor_orcid: name: contributor_orcid description: The ORCiD of the person who added this node. examples: - value: ORCID:0000-0001-1234-5678 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_orcid owner: SoftwareOrTool domain_of: - NamedThing range: uriorcurie contribution_date: name: contribution_date description: The date on which the node was added. examples: - value: '2023-03-20' from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contribution_date owner: SoftwareOrTool domain_of: - NamedThing range: date","title":"Induced"},{"location":"StandardsCollectionTag/","text":"Enum: StandardsCollectionTag Tags for specific sets of standards. URI: StandardsCollectionTag Permissible Values Value Meaning Description audiovisual None Audiovisual Standard deprecated None Deprecated fileformat None File Format toolkit None Bioinformatics Toolkit clinicaldata None Clinical Data multimodal None Multimodal Data Integration text None Text Data cloudplatform None Cloud Research Platform cloudservice None Cloud Service codesystem None Code System datamodel None Data Model dataregistry None Data Registry softwareregistry None Software Registry datavisualization None Data Visualization notebookplatform None Notebook Platform datasheets None Datasheets machinelearningframework None Machine Learning Framework workflowlanguage None Workflow Language diagnosticinstrument None Diagnostic Instrument drugdata None Drug Data eyedata None Eye Data markuplanguage None Markup Language graphdataplatform None Graph Data Platform guidelines None Guidelines minimuminformationschema None Minimum Information Schema modelcards None Model Cards obofoundry None OBO Foundry ontologyregistry None Ontology Registry policy None Policy proteindata None Protein Data referencegenome None Reference Genome scrnaseqanalysis None scRNA-seq Analysis speechdata None Speech Data standardsregistry None Standards Registry Slots Name Description collection Tags for specific sets of standards Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all LinkML Source name: StandardsCollectionTag description: Tags for specific sets of standards. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 permissible_values: audiovisual: text: audiovisual description: Audiovisual Standard deprecated: text: deprecated description: Deprecated fileformat: text: fileformat description: File Format toolkit: text: toolkit description: Bioinformatics Toolkit clinicaldata: text: clinicaldata description: Clinical Data multimodal: text: multimodal description: Multimodal Data Integration text: text: text description: Text Data cloudplatform: text: cloudplatform description: Cloud Research Platform cloudservice: text: cloudservice description: Cloud Service codesystem: text: codesystem description: Code System datamodel: text: datamodel description: Data Model dataregistry: text: dataregistry description: Data Registry softwareregistry: text: softwareregistry description: Software Registry datavisualization: text: datavisualization description: Data Visualization notebookplatform: text: notebookplatform description: Notebook Platform datasheets: text: datasheets description: Datasheets machinelearningframework: text: machinelearningframework description: Machine Learning Framework workflowlanguage: text: workflowlanguage description: Workflow Language diagnosticinstrument: text: diagnosticinstrument description: Diagnostic Instrument drugdata: text: drugdata description: Drug Data eyedata: text: eyedata description: Eye Data markuplanguage: text: markuplanguage description: Markup Language graphdataplatform: text: graphdataplatform description: Graph Data Platform guidelines: text: guidelines description: Guidelines minimuminformationschema: text: minimuminformationschema description: Minimum Information Schema modelcards: text: modelcards description: Model Cards obofoundry: text: obofoundry description: OBO Foundry ontologyregistry: text: ontologyregistry description: Ontology Registry policy: text: policy description: Policy proteindata: text: proteindata description: Protein Data referencegenome: text: referencegenome description: Reference Genome scrnaseqanalysis: text: scrnaseqanalysis description: scRNA-seq Analysis speechdata: text: speechdata description: Speech Data standardsregistry: text: standardsregistry description: Standards Registry","title":"Enum: StandardsCollectionTag"},{"location":"StandardsCollectionTag/#enum-standardscollectiontag","text":"Tags for specific sets of standards. URI: StandardsCollectionTag","title":"Enum: StandardsCollectionTag"},{"location":"StandardsCollectionTag/#permissible-values","text":"Value Meaning Description audiovisual None Audiovisual Standard deprecated None Deprecated fileformat None File Format toolkit None Bioinformatics Toolkit clinicaldata None Clinical Data multimodal None Multimodal Data Integration text None Text Data cloudplatform None Cloud Research Platform cloudservice None Cloud Service codesystem None Code System datamodel None Data Model dataregistry None Data Registry softwareregistry None Software Registry datavisualization None Data Visualization notebookplatform None Notebook Platform datasheets None Datasheets machinelearningframework None Machine Learning Framework workflowlanguage None Workflow Language diagnosticinstrument None Diagnostic Instrument drugdata None Drug Data eyedata None Eye Data markuplanguage None Markup Language graphdataplatform None Graph Data Platform guidelines None Guidelines minimuminformationschema None Minimum Information Schema modelcards None Model Cards obofoundry None OBO Foundry ontologyregistry None Ontology Registry policy None Policy proteindata None Protein Data referencegenome None Reference Genome scrnaseqanalysis None scRNA-seq Analysis speechdata None Speech Data standardsregistry None Standards Registry","title":"Permissible Values"},{"location":"StandardsCollectionTag/#slots","text":"Name Description collection Tags for specific sets of standards","title":"Slots"},{"location":"StandardsCollectionTag/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"StandardsCollectionTag/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"StandardsCollectionTag/#linkml-source","text":"name: StandardsCollectionTag description: Tags for specific sets of standards. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 permissible_values: audiovisual: text: audiovisual description: Audiovisual Standard deprecated: text: deprecated description: Deprecated fileformat: text: fileformat description: File Format toolkit: text: toolkit description: Bioinformatics Toolkit clinicaldata: text: clinicaldata description: Clinical Data multimodal: text: multimodal description: Multimodal Data Integration text: text: text description: Text Data cloudplatform: text: cloudplatform description: Cloud Research Platform cloudservice: text: cloudservice description: Cloud Service codesystem: text: codesystem description: Code System datamodel: text: datamodel description: Data Model dataregistry: text: dataregistry description: Data Registry softwareregistry: text: softwareregistry description: Software Registry datavisualization: text: datavisualization description: Data Visualization notebookplatform: text: notebookplatform description: Notebook Platform datasheets: text: datasheets description: Datasheets machinelearningframework: text: machinelearningframework description: Machine Learning Framework workflowlanguage: text: workflowlanguage description: Workflow Language diagnosticinstrument: text: diagnosticinstrument description: Diagnostic Instrument drugdata: text: drugdata description: Drug Data eyedata: text: eyedata description: Eye Data markuplanguage: text: markuplanguage description: Markup Language graphdataplatform: text: graphdataplatform description: Graph Data Platform guidelines: text: guidelines description: Guidelines minimuminformationschema: text: minimuminformationschema description: Minimum Information Schema modelcards: text: modelcards description: Model Cards obofoundry: text: obofoundry description: OBO Foundry ontologyregistry: text: ontologyregistry description: Ontology Registry policy: text: policy description: Policy proteindata: text: proteindata description: Protein Data referencegenome: text: referencegenome description: Reference Genome scrnaseqanalysis: text: scrnaseqanalysis description: scRNA-seq Analysis speechdata: text: speechdata description: Speech Data standardsregistry: text: standardsregistry description: Standards Registry","title":"LinkML Source"},{"location":"String/","text":"Type: String A character string URI: xsd:string base : str uri : xsd:string Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Type: String"},{"location":"String/#type-string","text":"A character string URI: xsd:string base : str uri : xsd:string","title":"Type: String"},{"location":"String/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"String/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"Time/","text":"Type: Time A time object represents a (local) time of day, independent of any particular day URI: xsd:dateTime base : XSDTime uri : xsd:dateTime repr : str Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Type: Time"},{"location":"Time/#type-time","text":"A time object represents a (local) time of day, independent of any particular day URI: xsd:dateTime base : XSDTime uri : xsd:dateTime repr : str","title":"Type: Time"},{"location":"Time/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Time/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"TrainingProgram/","text":"Class: TrainingProgram Represents a training program for skills and experience related to standards or tools in the Bridge2AI Standards Registry. URI: https://w3id.org/bridge2ai/standards-schema-all/:TrainingProgram classDiagram class TrainingProgram DataStandardOrTool <|-- TrainingProgram TrainingProgram : category TrainingProgram : collection TrainingProgram ..> StandardsCollectionTag : collection TrainingProgram : concerns_data_topic TrainingProgram ..> DataTopic : concerns_data_topic TrainingProgram : contribution_date TrainingProgram : contributor_github_name TrainingProgram : contributor_name TrainingProgram : contributor_orcid TrainingProgram : description TrainingProgram : formal_specification TrainingProgram : has_relevant_organization TrainingProgram ..> Organization : has_relevant_organization TrainingProgram : id TrainingProgram : is_open TrainingProgram : name TrainingProgram : not_relevant_to_dgps TrainingProgram : publication TrainingProgram : purpose_detail TrainingProgram : related_to TrainingProgram ..> NamedThing : related_to TrainingProgram : requires_registration TrainingProgram : subclass_of TrainingProgram ..> NamedThing : subclass_of TrainingProgram : url Inheritance NamedThing DataStandardOrTool TrainingProgram Slots Name Cardinality and Range Description Inheritance collection 0..* StandardsCollectionTag Tags for specific sets of standards DataStandardOrTool concerns_data_topic 0..* DataTopic Subject standard is generally applied in the context of object data topic DataStandardOrTool has_relevant_organization 0..* Organization Subject standard is managed or otherwise guided buy the object organization(s... DataStandardOrTool purpose_detail 0..1 String Text description of the standard or tool DataStandardOrTool is_open 0..1 Boolean Is the standard or tool FAIR and available free of cost? DataStandardOrTool requires_registration 0..1 Boolean Does usage of the standard or tool require registrion of a user or group with... DataStandardOrTool url 0..1 Uriorcurie URL for basic documentation of the standard or tool DataStandardOrTool publication 0..1 Uriorcurie Relevant publication for the standard or tool DataStandardOrTool formal_specification 0..1 Uriorcurie Relevant code repository or other location for a formal specification of the ... DataStandardOrTool not_relevant_to_dgps 0..1 Boolean Is the standard or tool currently relevant to DGPs? DataStandardOrTool id 1..1 Uriorcurie A unique identifier for a thing NamedThing category 0..1 CategoryType Name of the high level ontology class in which this entity is categorized NamedThing name 0..1 String A human-readable name for a thing NamedThing description 0..1 String A human-readable description for a thing NamedThing subclass_of 0..* NamedThing Holds between two classes where the domain class is a specialization of the r... NamedThing related_to 0..* NamedThing A relationship that is asserted between two named things NamedThing contributor_name 0..1 String The name of the person who added this node NamedThing contributor_github_name 0..1 String The name of the github user who added this node NamedThing contributor_orcid 0..1 Uriorcurie The ORCiD of the person who added this node NamedThing contribution_date 0..1 Date The date on which the node was added NamedThing Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all Mappings Mapping Type Mapped Value self https://w3id.org/bridge2ai/standards-schema-all/:TrainingProgram native https://w3id.org/bridge2ai/standards-schema-all/:TrainingProgram LinkML Source Direct name: TrainingProgram description: Represents a training program for skills and experience related to standards or tools in the Bridge2AI Standards Registry. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: DataStandardOrTool Induced name: TrainingProgram description: Represents a training program for skills and experience related to standards or tools in the Bridge2AI Standards Registry. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: DataStandardOrTool attributes: collection: name: collection description: Tags for specific sets of standards. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing multivalued: true alias: collection owner: TrainingProgram domain_of: - DataStandardOrTool range: StandardsCollectionTag concerns_data_topic: name: concerns_data_topic description: Subject standard is generally applied in the context of object data topic. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: related_to domain: DataStandardOrTool multivalued: true inherited: true alias: concerns_data_topic owner: TrainingProgram domain_of: - DataStandardOrTool range: DataTopic has_relevant_organization: name: has_relevant_organization description: Subject standard is managed or otherwise guided buy the object organization(s). from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: related_to domain: DataStandardOrTool multivalued: true inherited: true alias: has_relevant_organization owner: TrainingProgram domain_of: - DataStandardOrTool range: Organization purpose_detail: name: purpose_detail description: Text description of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: purpose_detail owner: TrainingProgram domain_of: - DataStandardOrTool range: string is_open: name: is_open description: Is the standard or tool FAIR and available free of cost? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: is_open owner: TrainingProgram domain_of: - DataStandardOrTool range: boolean requires_registration: name: requires_registration description: Does usage of the standard or tool require registrion of a user or group with some organization or managerial body? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: requires_registration owner: TrainingProgram domain_of: - DataStandardOrTool range: boolean url: name: url description: URL for basic documentation of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: url owner: TrainingProgram domain_of: - DataStandardOrTool - Organization range: uriorcurie publication: name: publication description: Relevant publication for the standard or tool. Prefer a DOI or PUBMED. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: publication owner: TrainingProgram domain_of: - DataStandardOrTool range: uriorcurie formal_specification: name: formal_specification description: Relevant code repository or other location for a formal specification of the standard or tool. Often a URL, particularly to a Git repository. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: formal_specification owner: TrainingProgram domain_of: - DataStandardOrTool range: uriorcurie not_relevant_to_dgps: name: not_relevant_to_dgps description: Is the standard or tool currently relevant to DGPs? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: not_relevant_to_dgps owner: TrainingProgram domain_of: - DataStandardOrTool range: boolean id: name: id description: A unique identifier for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:identifier identifier: true alias: id owner: TrainingProgram domain_of: - NamedThing range: uriorcurie required: true category: name: category description: Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\". from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: type domain: NamedThing designates_type: true alias: category owner: TrainingProgram domain_of: - NamedThing range: category_type name: name: name description: A human-readable name for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:name alias: name owner: TrainingProgram domain_of: - NamedThing range: string description: name: description description: A human-readable description for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:description alias: description owner: TrainingProgram domain_of: - NamedThing range: string subclass_of: name: subclass_of description: Holds between two classes where the domain class is a specialization of the range class. from_schema: https://w3id.org/bridge2ai/standards-schema-all exact_mappings: - rdfs:subClassOf - MESH:isa narrow_mappings: - rdfs:subPropertyOf rank: 1000 is_a: related_to domain: NamedThing multivalued: true inherited: true alias: subclass_of owner: TrainingProgram domain_of: - NamedThing range: NamedThing related_to: name: related_to description: A relationship that is asserted between two named things. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 domain: NamedThing multivalued: true inherited: true alias: related_to owner: TrainingProgram domain_of: - NamedThing - Organization symmetric: true range: NamedThing contributor_name: name: contributor_name description: The name of the person who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_name owner: TrainingProgram domain_of: - NamedThing range: string contributor_github_name: name: contributor_github_name description: The name of the github user who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_github_name owner: TrainingProgram domain_of: - NamedThing range: string contributor_orcid: name: contributor_orcid description: The ORCiD of the person who added this node. examples: - value: ORCID:0000-0001-1234-5678 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_orcid owner: TrainingProgram domain_of: - NamedThing range: uriorcurie contribution_date: name: contribution_date description: The date on which the node was added. examples: - value: '2023-03-20' from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contribution_date owner: TrainingProgram domain_of: - NamedThing range: date","title":"Class: TrainingProgram"},{"location":"TrainingProgram/#class-trainingprogram","text":"Represents a training program for skills and experience related to standards or tools in the Bridge2AI Standards Registry. URI: https://w3id.org/bridge2ai/standards-schema-all/:TrainingProgram classDiagram class TrainingProgram DataStandardOrTool <|-- TrainingProgram TrainingProgram : category TrainingProgram : collection TrainingProgram ..> StandardsCollectionTag : collection TrainingProgram : concerns_data_topic TrainingProgram ..> DataTopic : concerns_data_topic TrainingProgram : contribution_date TrainingProgram : contributor_github_name TrainingProgram : contributor_name TrainingProgram : contributor_orcid TrainingProgram : description TrainingProgram : formal_specification TrainingProgram : has_relevant_organization TrainingProgram ..> Organization : has_relevant_organization TrainingProgram : id TrainingProgram : is_open TrainingProgram : name TrainingProgram : not_relevant_to_dgps TrainingProgram : publication TrainingProgram : purpose_detail TrainingProgram : related_to TrainingProgram ..> NamedThing : related_to TrainingProgram : requires_registration TrainingProgram : subclass_of TrainingProgram ..> NamedThing : subclass_of TrainingProgram : url","title":"Class: TrainingProgram"},{"location":"TrainingProgram/#inheritance","text":"NamedThing DataStandardOrTool TrainingProgram","title":"Inheritance"},{"location":"TrainingProgram/#slots","text":"Name Cardinality and Range Description Inheritance collection 0..* StandardsCollectionTag Tags for specific sets of standards DataStandardOrTool concerns_data_topic 0..* DataTopic Subject standard is generally applied in the context of object data topic DataStandardOrTool has_relevant_organization 0..* Organization Subject standard is managed or otherwise guided buy the object organization(s... DataStandardOrTool purpose_detail 0..1 String Text description of the standard or tool DataStandardOrTool is_open 0..1 Boolean Is the standard or tool FAIR and available free of cost? DataStandardOrTool requires_registration 0..1 Boolean Does usage of the standard or tool require registrion of a user or group with... DataStandardOrTool url 0..1 Uriorcurie URL for basic documentation of the standard or tool DataStandardOrTool publication 0..1 Uriorcurie Relevant publication for the standard or tool DataStandardOrTool formal_specification 0..1 Uriorcurie Relevant code repository or other location for a formal specification of the ... DataStandardOrTool not_relevant_to_dgps 0..1 Boolean Is the standard or tool currently relevant to DGPs? DataStandardOrTool id 1..1 Uriorcurie A unique identifier for a thing NamedThing category 0..1 CategoryType Name of the high level ontology class in which this entity is categorized NamedThing name 0..1 String A human-readable name for a thing NamedThing description 0..1 String A human-readable description for a thing NamedThing subclass_of 0..* NamedThing Holds between two classes where the domain class is a specialization of the r... NamedThing related_to 0..* NamedThing A relationship that is asserted between two named things NamedThing contributor_name 0..1 String The name of the person who added this node NamedThing contributor_github_name 0..1 String The name of the github user who added this node NamedThing contributor_orcid 0..1 Uriorcurie The ORCiD of the person who added this node NamedThing contribution_date 0..1 Date The date on which the node was added NamedThing","title":"Slots"},{"location":"TrainingProgram/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"TrainingProgram/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"TrainingProgram/#mappings","text":"Mapping Type Mapped Value self https://w3id.org/bridge2ai/standards-schema-all/:TrainingProgram native https://w3id.org/bridge2ai/standards-schema-all/:TrainingProgram","title":"Mappings"},{"location":"TrainingProgram/#linkml-source","text":"","title":"LinkML Source"},{"location":"TrainingProgram/#direct","text":"name: TrainingProgram description: Represents a training program for skills and experience related to standards or tools in the Bridge2AI Standards Registry. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: DataStandardOrTool","title":"Direct"},{"location":"TrainingProgram/#induced","text":"name: TrainingProgram description: Represents a training program for skills and experience related to standards or tools in the Bridge2AI Standards Registry. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: DataStandardOrTool attributes: collection: name: collection description: Tags for specific sets of standards. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing multivalued: true alias: collection owner: TrainingProgram domain_of: - DataStandardOrTool range: StandardsCollectionTag concerns_data_topic: name: concerns_data_topic description: Subject standard is generally applied in the context of object data topic. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: related_to domain: DataStandardOrTool multivalued: true inherited: true alias: concerns_data_topic owner: TrainingProgram domain_of: - DataStandardOrTool range: DataTopic has_relevant_organization: name: has_relevant_organization description: Subject standard is managed or otherwise guided buy the object organization(s). from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: related_to domain: DataStandardOrTool multivalued: true inherited: true alias: has_relevant_organization owner: TrainingProgram domain_of: - DataStandardOrTool range: Organization purpose_detail: name: purpose_detail description: Text description of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: purpose_detail owner: TrainingProgram domain_of: - DataStandardOrTool range: string is_open: name: is_open description: Is the standard or tool FAIR and available free of cost? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: is_open owner: TrainingProgram domain_of: - DataStandardOrTool range: boolean requires_registration: name: requires_registration description: Does usage of the standard or tool require registrion of a user or group with some organization or managerial body? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: requires_registration owner: TrainingProgram domain_of: - DataStandardOrTool range: boolean url: name: url description: URL for basic documentation of the standard or tool. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: url owner: TrainingProgram domain_of: - DataStandardOrTool - Organization range: uriorcurie publication: name: publication description: Relevant publication for the standard or tool. Prefer a DOI or PUBMED. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: publication owner: TrainingProgram domain_of: - DataStandardOrTool range: uriorcurie formal_specification: name: formal_specification description: Relevant code repository or other location for a formal specification of the standard or tool. Often a URL, particularly to a Git repository. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: formal_specification owner: TrainingProgram domain_of: - DataStandardOrTool range: uriorcurie not_relevant_to_dgps: name: not_relevant_to_dgps description: Is the standard or tool currently relevant to DGPs? from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: not_relevant_to_dgps owner: TrainingProgram domain_of: - DataStandardOrTool range: boolean id: name: id description: A unique identifier for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:identifier identifier: true alias: id owner: TrainingProgram domain_of: - NamedThing range: uriorcurie required: true category: name: category description: Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\". from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: type domain: NamedThing designates_type: true alias: category owner: TrainingProgram domain_of: - NamedThing range: category_type name: name: name description: A human-readable name for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:name alias: name owner: TrainingProgram domain_of: - NamedThing range: string description: name: description description: A human-readable description for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:description alias: description owner: TrainingProgram domain_of: - NamedThing range: string subclass_of: name: subclass_of description: Holds between two classes where the domain class is a specialization of the range class. from_schema: https://w3id.org/bridge2ai/standards-schema-all exact_mappings: - rdfs:subClassOf - MESH:isa narrow_mappings: - rdfs:subPropertyOf rank: 1000 is_a: related_to domain: NamedThing multivalued: true inherited: true alias: subclass_of owner: TrainingProgram domain_of: - NamedThing range: NamedThing related_to: name: related_to description: A relationship that is asserted between two named things. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 domain: NamedThing multivalued: true inherited: true alias: related_to owner: TrainingProgram domain_of: - NamedThing - Organization symmetric: true range: NamedThing contributor_name: name: contributor_name description: The name of the person who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_name owner: TrainingProgram domain_of: - NamedThing range: string contributor_github_name: name: contributor_github_name description: The name of the github user who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_github_name owner: TrainingProgram domain_of: - NamedThing range: string contributor_orcid: name: contributor_orcid description: The ORCiD of the person who added this node. examples: - value: ORCID:0000-0001-1234-5678 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_orcid owner: TrainingProgram domain_of: - NamedThing range: uriorcurie contribution_date: name: contribution_date description: The date on which the node was added. examples: - value: '2023-03-20' from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contribution_date owner: TrainingProgram domain_of: - NamedThing range: date","title":"Induced"},{"location":"Uri/","text":"Type: Uri a complete URI URI: xsd:anyURI base : URI uri : xsd:anyURI repr : str Comments in RDF serializations a slot with range of uri is treated as a literal or type xsd:anyURI unless it is an identifier or a reference to an identifier, in which case it is translated directly to a node Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Type: Uri"},{"location":"Uri/#type-uri","text":"a complete URI URI: xsd:anyURI base : URI uri : xsd:anyURI repr : str","title":"Type: Uri"},{"location":"Uri/#comments","text":"in RDF serializations a slot with range of uri is treated as a literal or type xsd:anyURI unless it is an identifier or a reference to an identifier, in which case it is translated directly to a node","title":"Comments"},{"location":"Uri/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Uri/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"Uriorcurie/","text":"Type: Uriorcurie a URI or a CURIE URI: xsd:anyURI base : URIorCURIE uri : xsd:anyURI repr : str Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Type: Uriorcurie"},{"location":"Uriorcurie/#type-uriorcurie","text":"a URI or a CURIE URI: xsd:anyURI base : URIorCURIE uri : xsd:anyURI repr : str","title":"Type: Uriorcurie"},{"location":"Uriorcurie/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Uriorcurie/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"UseCase/","text":"Class: UseCase Represents a use case for Bridge2AI standards. URI: https://w3id.org/bridge2ai/standards-schema-all/:UseCase classDiagram class UseCase NamedThing <|-- UseCase UseCase : alternative_standards_and_tools UseCase ..> DataStandardOrTool : alternative_standards_and_tools UseCase : category UseCase : contribution_date UseCase : contributor_github_name UseCase : contributor_name UseCase : contributor_orcid UseCase : data_substrates UseCase ..> DataSubstrate : data_substrates UseCase : data_topics UseCase ..> DataTopic : data_topics UseCase : description UseCase : enables UseCase ..> UseCase : enables UseCase : id UseCase : involved_in_experimental_design UseCase : involved_in_metadata_management UseCase : involved_in_quality_control UseCase : known_limitations UseCase : name UseCase : related_to UseCase ..> NamedThing : related_to UseCase : relevance_to_dgps UseCase ..> DataGeneratingProject : relevance_to_dgps UseCase : standards_and_tools_for_dgp_use UseCase ..> DataStandardOrTool : standards_and_tools_for_dgp_use UseCase : subclass_of UseCase ..> NamedThing : subclass_of UseCase : use_case_category UseCase ..> UseCaseCategory : use_case_category UseCase : xref Inheritance NamedThing UseCase Slots Name Cardinality and Range Description Inheritance use_case_category 0..1 UseCaseCategory Category of the UseCase direct known_limitations 0..1 String Any current obstacles to implementing this use case direct relevance_to_dgps 0..* DataGeneratingProject Relevance of the use case to one or more DGPs direct data_topics 0..* DataTopic Relevance of the use case to one or more data topics direct data_substrates 0..* DataSubstrate Relevance of the use case to one or more data substrates direct standards_and_tools_for_dgp_use 0..* DataStandardOrTool List of identifiers of standards and tools; those planned to be used, or alre... direct alternative_standards_and_tools 0..* DataStandardOrTool List of identifiers of standards and tools; those not explicitly planned to b... direct enables 0..* UseCase Other use case(s) this use case supports or makes possible direct involved_in_experimental_design 0..1 Boolean True if use case is likely to be implemented as part of an experimental proce... direct involved_in_metadata_management 0..1 Boolean True if use case is likely to be implemented as part of metadata indexing, sa... direct involved_in_quality_control 0..1 Boolean True is use case is likely to be implemented as part of data validation opera... direct xref 0..* Uriorcurie URI of corresponding class in an ontology of experimental procedures, in CURI... direct id 1..1 Uriorcurie A unique identifier for a thing NamedThing category 0..1 CategoryType Name of the high level ontology class in which this entity is categorized NamedThing name 0..1 String A human-readable name for a thing NamedThing description 0..1 String A human-readable description for a thing NamedThing subclass_of 0..* NamedThing Holds between two classes where the domain class is a specialization of the r... NamedThing related_to 0..* NamedThing A relationship that is asserted between two named things NamedThing contributor_name 0..1 String The name of the person who added this node NamedThing contributor_github_name 0..1 String The name of the github user who added this node NamedThing contributor_orcid 0..1 Uriorcurie The ORCiD of the person who added this node NamedThing contribution_date 0..1 Date The date on which the node was added NamedThing Usages used by used in type used UseCase enables range UseCase UseCaseContainer use_cases range UseCase Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all Mappings Mapping Type Mapped Value self https://w3id.org/bridge2ai/standards-schema-all/:UseCase native https://w3id.org/bridge2ai/standards-schema-all/:UseCase LinkML Source Direct name: UseCase description: Represents a use case for Bridge2AI standards. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: NamedThing slots: - use_case_category - known_limitations - relevance_to_dgps - data_topics - data_substrates - standards_and_tools_for_dgp_use - alternative_standards_and_tools - enables - involved_in_experimental_design - involved_in_metadata_management - involved_in_quality_control - xref slot_usage: use_case_category: name: use_case_category domain_of: - UseCase required: true Induced name: UseCase description: Represents a use case for Bridge2AI standards. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: NamedThing slot_usage: use_case_category: name: use_case_category domain_of: - UseCase required: true attributes: use_case_category: name: use_case_category description: Category of the UseCase. Not all projects will incorporate use cases in all categories. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: use_case_category owner: UseCase domain_of: - UseCase range: UseCaseCategory required: true known_limitations: name: known_limitations description: Any current obstacles to implementing this use case. This could be a selection from one or more predefined categories including lack of standards, lack of relevant patient cohort, lack of funding, etc. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: known_limitations owner: UseCase domain_of: - UseCase range: string relevance_to_dgps: name: relevance_to_dgps description: Relevance of the use case to one or more DGPs. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 multivalued: true alias: relevance_to_dgps owner: UseCase domain_of: - UseCase range: DataGeneratingProject data_topics: name: data_topics description: Relevance of the use case to one or more data topics. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing multivalued: true alias: data_topics owner: UseCase domain_of: - UseCase range: DataTopic data_substrates: name: data_substrates description: Relevance of the use case to one or more data substrates. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing multivalued: true alias: data_substrates owner: UseCase domain_of: - UseCase range: DataSubstrate standards_and_tools_for_dgp_use: name: standards_and_tools_for_dgp_use description: List of identifiers of standards and tools; those planned to be used, or already in use, by one or more Bridge2AI DGPs in addressing this use case, from those in the Standards Registry, or TBD if standards/tools not yet finalized for this use case. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing multivalued: true alias: standards_and_tools_for_dgp_use owner: UseCase domain_of: - UseCase range: DataStandardOrTool alternative_standards_and_tools: name: alternative_standards_and_tools description: List of identifiers of standards and tools; those not explicitly planned to be used, by one or more Bridge2AI DGPs in addressing this use case but serving as viable alternatives, from those in the Standards Registry. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing multivalued: true alias: alternative_standards_and_tools owner: UseCase domain_of: - UseCase range: DataStandardOrTool enables: name: enables description: Other use case(s) this use case supports or makes possible. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing multivalued: true alias: enables owner: UseCase domain_of: - UseCase range: UseCase involved_in_experimental_design: name: involved_in_experimental_design description: True if use case is likely to be implemented as part of an experimental procedure or collection of data to be used as part of an experiment. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: involved_in_experimental_design owner: UseCase domain_of: - UseCase range: boolean involved_in_metadata_management: name: involved_in_metadata_management description: True if use case is likely to be implemented as part of metadata indexing, sample tracking, or any other storage of high-level data properties. Includes use cases in which metadata will be collected along with data. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: involved_in_metadata_management owner: UseCase domain_of: - UseCase range: boolean involved_in_quality_control: name: involved_in_quality_control description: True is use case is likely to be implemented as part of data validation operations. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: involved_in_quality_control owner: UseCase domain_of: - UseCase range: boolean xref: name: xref description: URI of corresponding class in an ontology of experimental procedures, in CURIE form. from_schema: https://w3id.org/bridge2ai/standards-schema-all aliases: - dbxref - Dbxref - DbXref rank: 1000 is_a: node_property domain: NamedThing multivalued: true alias: xref owner: UseCase domain_of: - UseCase range: uriorcurie id: name: id description: A unique identifier for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:identifier identifier: true alias: id owner: UseCase domain_of: - NamedThing range: uriorcurie required: true category: name: category description: Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\". from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: type domain: NamedThing designates_type: true alias: category owner: UseCase domain_of: - NamedThing range: category_type name: name: name description: A human-readable name for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:name alias: name owner: UseCase domain_of: - NamedThing range: string description: name: description description: A human-readable description for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:description alias: description owner: UseCase domain_of: - NamedThing range: string subclass_of: name: subclass_of description: Holds between two classes where the domain class is a specialization of the range class. from_schema: https://w3id.org/bridge2ai/standards-schema-all exact_mappings: - rdfs:subClassOf - MESH:isa narrow_mappings: - rdfs:subPropertyOf rank: 1000 is_a: related_to domain: NamedThing multivalued: true inherited: true alias: subclass_of owner: UseCase domain_of: - NamedThing range: NamedThing related_to: name: related_to description: A relationship that is asserted between two named things. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 domain: NamedThing multivalued: true inherited: true alias: related_to owner: UseCase domain_of: - NamedThing - Organization symmetric: true range: NamedThing contributor_name: name: contributor_name description: The name of the person who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_name owner: UseCase domain_of: - NamedThing range: string contributor_github_name: name: contributor_github_name description: The name of the github user who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_github_name owner: UseCase domain_of: - NamedThing range: string contributor_orcid: name: contributor_orcid description: The ORCiD of the person who added this node. examples: - value: ORCID:0000-0001-1234-5678 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_orcid owner: UseCase domain_of: - NamedThing range: uriorcurie contribution_date: name: contribution_date description: The date on which the node was added. examples: - value: '2023-03-20' from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contribution_date owner: UseCase domain_of: - NamedThing range: date","title":"Class: UseCase"},{"location":"UseCase/#class-usecase","text":"Represents a use case for Bridge2AI standards. URI: https://w3id.org/bridge2ai/standards-schema-all/:UseCase classDiagram class UseCase NamedThing <|-- UseCase UseCase : alternative_standards_and_tools UseCase ..> DataStandardOrTool : alternative_standards_and_tools UseCase : category UseCase : contribution_date UseCase : contributor_github_name UseCase : contributor_name UseCase : contributor_orcid UseCase : data_substrates UseCase ..> DataSubstrate : data_substrates UseCase : data_topics UseCase ..> DataTopic : data_topics UseCase : description UseCase : enables UseCase ..> UseCase : enables UseCase : id UseCase : involved_in_experimental_design UseCase : involved_in_metadata_management UseCase : involved_in_quality_control UseCase : known_limitations UseCase : name UseCase : related_to UseCase ..> NamedThing : related_to UseCase : relevance_to_dgps UseCase ..> DataGeneratingProject : relevance_to_dgps UseCase : standards_and_tools_for_dgp_use UseCase ..> DataStandardOrTool : standards_and_tools_for_dgp_use UseCase : subclass_of UseCase ..> NamedThing : subclass_of UseCase : use_case_category UseCase ..> UseCaseCategory : use_case_category UseCase : xref","title":"Class: UseCase"},{"location":"UseCase/#inheritance","text":"NamedThing UseCase","title":"Inheritance"},{"location":"UseCase/#slots","text":"Name Cardinality and Range Description Inheritance use_case_category 0..1 UseCaseCategory Category of the UseCase direct known_limitations 0..1 String Any current obstacles to implementing this use case direct relevance_to_dgps 0..* DataGeneratingProject Relevance of the use case to one or more DGPs direct data_topics 0..* DataTopic Relevance of the use case to one or more data topics direct data_substrates 0..* DataSubstrate Relevance of the use case to one or more data substrates direct standards_and_tools_for_dgp_use 0..* DataStandardOrTool List of identifiers of standards and tools; those planned to be used, or alre... direct alternative_standards_and_tools 0..* DataStandardOrTool List of identifiers of standards and tools; those not explicitly planned to b... direct enables 0..* UseCase Other use case(s) this use case supports or makes possible direct involved_in_experimental_design 0..1 Boolean True if use case is likely to be implemented as part of an experimental proce... direct involved_in_metadata_management 0..1 Boolean True if use case is likely to be implemented as part of metadata indexing, sa... direct involved_in_quality_control 0..1 Boolean True is use case is likely to be implemented as part of data validation opera... direct xref 0..* Uriorcurie URI of corresponding class in an ontology of experimental procedures, in CURI... direct id 1..1 Uriorcurie A unique identifier for a thing NamedThing category 0..1 CategoryType Name of the high level ontology class in which this entity is categorized NamedThing name 0..1 String A human-readable name for a thing NamedThing description 0..1 String A human-readable description for a thing NamedThing subclass_of 0..* NamedThing Holds between two classes where the domain class is a specialization of the r... NamedThing related_to 0..* NamedThing A relationship that is asserted between two named things NamedThing contributor_name 0..1 String The name of the person who added this node NamedThing contributor_github_name 0..1 String The name of the github user who added this node NamedThing contributor_orcid 0..1 Uriorcurie The ORCiD of the person who added this node NamedThing contribution_date 0..1 Date The date on which the node was added NamedThing","title":"Slots"},{"location":"UseCase/#usages","text":"used by used in type used UseCase enables range UseCase UseCaseContainer use_cases range UseCase","title":"Usages"},{"location":"UseCase/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"UseCase/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"UseCase/#mappings","text":"Mapping Type Mapped Value self https://w3id.org/bridge2ai/standards-schema-all/:UseCase native https://w3id.org/bridge2ai/standards-schema-all/:UseCase","title":"Mappings"},{"location":"UseCase/#linkml-source","text":"","title":"LinkML Source"},{"location":"UseCase/#direct","text":"name: UseCase description: Represents a use case for Bridge2AI standards. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: NamedThing slots: - use_case_category - known_limitations - relevance_to_dgps - data_topics - data_substrates - standards_and_tools_for_dgp_use - alternative_standards_and_tools - enables - involved_in_experimental_design - involved_in_metadata_management - involved_in_quality_control - xref slot_usage: use_case_category: name: use_case_category domain_of: - UseCase required: true","title":"Direct"},{"location":"UseCase/#induced","text":"name: UseCase description: Represents a use case for Bridge2AI standards. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: NamedThing slot_usage: use_case_category: name: use_case_category domain_of: - UseCase required: true attributes: use_case_category: name: use_case_category description: Category of the UseCase. Not all projects will incorporate use cases in all categories. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: use_case_category owner: UseCase domain_of: - UseCase range: UseCaseCategory required: true known_limitations: name: known_limitations description: Any current obstacles to implementing this use case. This could be a selection from one or more predefined categories including lack of standards, lack of relevant patient cohort, lack of funding, etc. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: known_limitations owner: UseCase domain_of: - UseCase range: string relevance_to_dgps: name: relevance_to_dgps description: Relevance of the use case to one or more DGPs. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 multivalued: true alias: relevance_to_dgps owner: UseCase domain_of: - UseCase range: DataGeneratingProject data_topics: name: data_topics description: Relevance of the use case to one or more data topics. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing multivalued: true alias: data_topics owner: UseCase domain_of: - UseCase range: DataTopic data_substrates: name: data_substrates description: Relevance of the use case to one or more data substrates. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing multivalued: true alias: data_substrates owner: UseCase domain_of: - UseCase range: DataSubstrate standards_and_tools_for_dgp_use: name: standards_and_tools_for_dgp_use description: List of identifiers of standards and tools; those planned to be used, or already in use, by one or more Bridge2AI DGPs in addressing this use case, from those in the Standards Registry, or TBD if standards/tools not yet finalized for this use case. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing multivalued: true alias: standards_and_tools_for_dgp_use owner: UseCase domain_of: - UseCase range: DataStandardOrTool alternative_standards_and_tools: name: alternative_standards_and_tools description: List of identifiers of standards and tools; those not explicitly planned to be used, by one or more Bridge2AI DGPs in addressing this use case but serving as viable alternatives, from those in the Standards Registry. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing multivalued: true alias: alternative_standards_and_tools owner: UseCase domain_of: - UseCase range: DataStandardOrTool enables: name: enables description: Other use case(s) this use case supports or makes possible. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing multivalued: true alias: enables owner: UseCase domain_of: - UseCase range: UseCase involved_in_experimental_design: name: involved_in_experimental_design description: True if use case is likely to be implemented as part of an experimental procedure or collection of data to be used as part of an experiment. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: involved_in_experimental_design owner: UseCase domain_of: - UseCase range: boolean involved_in_metadata_management: name: involved_in_metadata_management description: True if use case is likely to be implemented as part of metadata indexing, sample tracking, or any other storage of high-level data properties. Includes use cases in which metadata will be collected along with data. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: involved_in_metadata_management owner: UseCase domain_of: - UseCase range: boolean involved_in_quality_control: name: involved_in_quality_control description: True is use case is likely to be implemented as part of data validation operations. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: involved_in_quality_control owner: UseCase domain_of: - UseCase range: boolean xref: name: xref description: URI of corresponding class in an ontology of experimental procedures, in CURIE form. from_schema: https://w3id.org/bridge2ai/standards-schema-all aliases: - dbxref - Dbxref - DbXref rank: 1000 is_a: node_property domain: NamedThing multivalued: true alias: xref owner: UseCase domain_of: - UseCase range: uriorcurie id: name: id description: A unique identifier for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:identifier identifier: true alias: id owner: UseCase domain_of: - NamedThing range: uriorcurie required: true category: name: category description: Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\". from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: type domain: NamedThing designates_type: true alias: category owner: UseCase domain_of: - NamedThing range: category_type name: name: name description: A human-readable name for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:name alias: name owner: UseCase domain_of: - NamedThing range: string description: name: description description: A human-readable description for a thing. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slot_uri: schema:description alias: description owner: UseCase domain_of: - NamedThing range: string subclass_of: name: subclass_of description: Holds between two classes where the domain class is a specialization of the range class. from_schema: https://w3id.org/bridge2ai/standards-schema-all exact_mappings: - rdfs:subClassOf - MESH:isa narrow_mappings: - rdfs:subPropertyOf rank: 1000 is_a: related_to domain: NamedThing multivalued: true inherited: true alias: subclass_of owner: UseCase domain_of: - NamedThing range: NamedThing related_to: name: related_to description: A relationship that is asserted between two named things. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 domain: NamedThing multivalued: true inherited: true alias: related_to owner: UseCase domain_of: - NamedThing - Organization symmetric: true range: NamedThing contributor_name: name: contributor_name description: The name of the person who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_name owner: UseCase domain_of: - NamedThing range: string contributor_github_name: name: contributor_github_name description: The name of the github user who added this node. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_github_name owner: UseCase domain_of: - NamedThing range: string contributor_orcid: name: contributor_orcid description: The ORCiD of the person who added this node. examples: - value: ORCID:0000-0001-1234-5678 from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contributor_orcid owner: UseCase domain_of: - NamedThing range: uriorcurie contribution_date: name: contribution_date description: The date on which the node was added. examples: - value: '2023-03-20' from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing alias: contribution_date owner: UseCase domain_of: - NamedThing range: date","title":"Induced"},{"location":"UseCaseCategory/","text":"Enum: UseCaseCategory Category of use case. URI: UseCaseCategory Permissible Values Value Meaning Description acquisition None Acquisition integration None Integration standardization None Standardization modeling None Modeling application None Application assessment None Assessment Slots Name Description use_case_category Category of the UseCase Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all LinkML Source name: UseCaseCategory description: Category of use case. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 permissible_values: acquisition: text: acquisition description: Acquisition integration: text: integration description: Integration standardization: text: standardization description: Standardization modeling: text: modeling description: Modeling application: text: application description: Application assessment: text: assessment description: Assessment","title":"Enum: UseCaseCategory"},{"location":"UseCaseCategory/#enum-usecasecategory","text":"Category of use case. URI: UseCaseCategory","title":"Enum: UseCaseCategory"},{"location":"UseCaseCategory/#permissible-values","text":"Value Meaning Description acquisition None Acquisition integration None Integration standardization None Standardization modeling None Modeling application None Application assessment None Assessment","title":"Permissible Values"},{"location":"UseCaseCategory/#slots","text":"Name Description use_case_category Category of the UseCase","title":"Slots"},{"location":"UseCaseCategory/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"UseCaseCategory/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"UseCaseCategory/#linkml-source","text":"name: UseCaseCategory description: Category of use case. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 permissible_values: acquisition: text: acquisition description: Acquisition integration: text: integration description: Integration standardization: text: standardization description: Standardization modeling: text: modeling description: Modeling application: text: application description: Application assessment: text: assessment description: Assessment","title":"LinkML Source"},{"location":"UseCaseContainer/","text":"Class: UseCaseContainer A container for UseCase. URI: https://w3id.org/bridge2ai/standards-schema-all/:UseCaseContainer classDiagram class UseCaseContainer UseCaseContainer : use_cases UseCaseContainer ..> UseCase : use_cases Slots Name Cardinality and Range Description Inheritance use_cases 0..* UseCase Collection of associated use cases direct Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all Mappings Mapping Type Mapped Value self https://w3id.org/bridge2ai/standards-schema-all/:UseCaseContainer native https://w3id.org/bridge2ai/standards-schema-all/:UseCaseContainer LinkML Source Direct name: UseCaseContainer description: A container for UseCase. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slots: - use_cases Induced name: UseCaseContainer description: A container for UseCase. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 attributes: use_cases: name: use_cases description: Collection of associated use cases from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 multivalued: true alias: use_cases owner: UseCaseContainer domain_of: - UseCaseContainer range: UseCase inlined: true inlined_as_list: true","title":"Class: UseCaseContainer"},{"location":"UseCaseContainer/#class-usecasecontainer","text":"A container for UseCase. URI: https://w3id.org/bridge2ai/standards-schema-all/:UseCaseContainer classDiagram class UseCaseContainer UseCaseContainer : use_cases UseCaseContainer ..> UseCase : use_cases","title":"Class: UseCaseContainer"},{"location":"UseCaseContainer/#slots","text":"Name Cardinality and Range Description Inheritance use_cases 0..* UseCase Collection of associated use cases direct","title":"Slots"},{"location":"UseCaseContainer/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"UseCaseContainer/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"UseCaseContainer/#mappings","text":"Mapping Type Mapped Value self https://w3id.org/bridge2ai/standards-schema-all/:UseCaseContainer native https://w3id.org/bridge2ai/standards-schema-all/:UseCaseContainer","title":"Mappings"},{"location":"UseCaseContainer/#linkml-source","text":"","title":"LinkML Source"},{"location":"UseCaseContainer/#direct","text":"name: UseCaseContainer description: A container for UseCase. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 slots: - use_cases","title":"Direct"},{"location":"UseCaseContainer/#induced","text":"name: UseCaseContainer description: A container for UseCase. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 attributes: use_cases: name: use_cases description: Collection of associated use cases from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 multivalued: true alias: use_cases owner: UseCaseContainer domain_of: - UseCaseContainer range: UseCase inlined: true inlined_as_list: true","title":"Induced"},{"location":"WikidataIdentifier/","text":"Type: WikidataIdentifier Identifier from Wikidata open knowledge base. URI: xsd:anyURI base : URIorCURIE uri : xsd:anyURI repr : str typeof : uriorcurie Identifier and Mapping Information Valid ID Prefixes Instances of this class should have identifiers with one of the following prefixes: wikidata Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Type: WikidataIdentifier"},{"location":"WikidataIdentifier/#type-wikidataidentifier","text":"Identifier from Wikidata open knowledge base. URI: xsd:anyURI base : URIorCURIE uri : xsd:anyURI repr : str typeof : uriorcurie","title":"Type: WikidataIdentifier"},{"location":"WikidataIdentifier/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"WikidataIdentifier/#valid-id-prefixes","text":"Instances of this class should have identifiers with one of the following prefixes: wikidata","title":"Valid ID Prefixes"},{"location":"WikidataIdentifier/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"about/","text":"standards-schemas Data schemas for Bridge2AI Standards and Use Cases.","title":"About"},{"location":"about/#standards-schemas","text":"Data schemas for Bridge2AI Standards and Use Cases.","title":"standards-schemas"},{"location":"alternative_standards_and_tools/","text":"Slot: alternative_standards_and_tools List of identifiers of standards and tools; those not explicitly planned to be used, by one or more Bridge2AI DGPs in addressing this use case but serving as viable alternatives, from those in the Standards Registry. URI: https://w3id.org/bridge2ai/standards-schema-all/:alternative_standards_and_tools Inheritance node_property alternative_standards_and_tools Applicable Classes Name Description UseCase Represents a use case for Bridge2AI standards Properties Range: DataStandardOrTool Multivalued: True Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all LinkML Source name: alternative_standards_and_tools description: List of identifiers of standards and tools; those not explicitly planned to be used, by one or more Bridge2AI DGPs in addressing this use case but serving as viable alternatives, from those in the Standards Registry. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing multivalued: true alias: alternative_standards_and_tools domain_of: - UseCase range: DataStandardOrTool","title":"Slot: alternative_standards_and_tools"},{"location":"alternative_standards_and_tools/#slot-alternative_standards_and_tools","text":"List of identifiers of standards and tools; those not explicitly planned to be used, by one or more Bridge2AI DGPs in addressing this use case but serving as viable alternatives, from those in the Standards Registry. URI: https://w3id.org/bridge2ai/standards-schema-all/:alternative_standards_and_tools","title":"Slot: alternative_standards_and_tools"},{"location":"alternative_standards_and_tools/#inheritance","text":"node_property alternative_standards_and_tools","title":"Inheritance"},{"location":"alternative_standards_and_tools/#applicable-classes","text":"Name Description UseCase Represents a use case for Bridge2AI standards","title":"Applicable Classes"},{"location":"alternative_standards_and_tools/#properties","text":"Range: DataStandardOrTool Multivalued: True","title":"Properties"},{"location":"alternative_standards_and_tools/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"alternative_standards_and_tools/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"alternative_standards_and_tools/#linkml-source","text":"name: alternative_standards_and_tools description: List of identifiers of standards and tools; those not explicitly planned to be used, by one or more Bridge2AI DGPs in addressing this use case but serving as viable alternatives, from those in the Standards Registry. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing multivalued: true alias: alternative_standards_and_tools domain_of: - UseCase range: DataStandardOrTool","title":"LinkML Source"},{"location":"category/","text":"Slot: category Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\". URI: https://w3id.org/bridge2ai/standards-schema-all/:category Inheritance type category Applicable Classes Name Description NamedThing A generic grouping for any identifiable entity UseCase Represents a use case for Bridge2AI standards DataStandardOrTool Represents a standard or tool in the Bridge2AI Standards Registry DataStandard Represents a general purpose standard in the Bridge2AI Standards Registry BiomedicalStandard Represents a standard in the Bridge2AI Standards Registry with particular app... Registry Represents a resource in the Bridge2AI Standards Registry serving to curate a... OntologyOrVocabulary A set of concepts and categories, potentially defined or accompanied by their... ModelRepository Represents a resource in the Bridge2AI Standards Registry serving to curate a... ReferenceDataOrDataset Represents a resource in the Bridge2AI Standards Registry serving as a standa... SoftwareOrTool Represents a piece of software or computational tool in the Bridge2AI Standar... ReferenceImplementation Represents an implementation of one or more standards or tools in the Bridge2... TrainingProgram Represents a training program for skills and experience related to standards ... DataTopic Represents a general data topic for Bridge2AI data or the tools/standards app... AnatomicalEntity A subcellular location, cell type or gross anatomical part Organization Represents a group or organization related to or responsible for one or more ... DataSubstrate Represents a data substrate for Bridge2AI data Properties Range: CategoryType Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all LinkML Source name: category description: Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\". from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: type domain: NamedThing designates_type: true alias: category domain_of: - NamedThing range: category_type","title":"Slot: category"},{"location":"category/#slot-category","text":"Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\". 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ReferenceDataOrDataset Represents a resource in the Bridge2AI Standards Registry serving as a standa... SoftwareOrTool Represents a piece of software or computational tool in the Bridge2AI Standar... ReferenceImplementation Represents an implementation of one or more standards or tools in the Bridge2... TrainingProgram Represents a training program for skills and experience related to standards ... DataTopic Represents a general data topic for Bridge2AI data or the tools/standards app... AnatomicalEntity A subcellular location, cell type or gross anatomical part Organization Represents a group or organization related to or responsible for one or more ... DataSubstrate Represents a data substrate for Bridge2AI data","title":"Applicable Classes"},{"location":"category/#properties","text":"Range: CategoryType","title":"Properties"},{"location":"category/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"category/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"category/#linkml-source","text":"name: category description: Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\". from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: type domain: NamedThing designates_type: true alias: category domain_of: - NamedThing range: category_type","title":"LinkML Source"},{"location":"collection/","text":"Slot: collection Tags for specific sets of standards. URI: https://w3id.org/bridge2ai/standards-schema-all/:collection Inheritance node_property collection Applicable Classes Name Description DataStandardOrTool Represents a standard or tool in the Bridge2AI Standards Registry DataStandard Represents a general purpose standard in the Bridge2AI Standards Registry BiomedicalStandard Represents a standard in the Bridge2AI Standards Registry with particular app... Registry Represents a resource in the Bridge2AI Standards Registry serving to curate a... OntologyOrVocabulary A set of concepts and categories, potentially defined or accompanied by their... ModelRepository Represents a resource in the Bridge2AI Standards Registry serving to curate a... ReferenceDataOrDataset Represents a resource in the Bridge2AI Standards Registry serving as a standa... SoftwareOrTool Represents a piece of software or computational tool in the Bridge2AI Standar... ReferenceImplementation Represents an implementation of one or more standards or tools in the Bridge2... TrainingProgram Represents a training program for skills and experience related to standards ... Properties Range: StandardsCollectionTag Multivalued: True Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all LinkML Source name: collection description: Tags for specific sets of standards. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing multivalued: true alias: collection domain_of: - DataStandardOrTool range: StandardsCollectionTag","title":"Slot: collection"},{"location":"collection/#slot-collection","text":"Tags for specific sets of standards. URI: https://w3id.org/bridge2ai/standards-schema-all/:collection","title":"Slot: collection"},{"location":"collection/#inheritance","text":"node_property collection","title":"Inheritance"},{"location":"collection/#applicable-classes","text":"Name Description DataStandardOrTool Represents a standard or tool in the Bridge2AI Standards Registry DataStandard Represents a general purpose standard in the Bridge2AI Standards Registry BiomedicalStandard Represents a standard in the Bridge2AI Standards Registry with particular app... Registry Represents a resource in the Bridge2AI Standards Registry serving to curate a... OntologyOrVocabulary A set of concepts and categories, potentially defined or accompanied by their... ModelRepository Represents a resource in the Bridge2AI Standards Registry serving to curate a... ReferenceDataOrDataset Represents a resource in the Bridge2AI Standards Registry serving as a standa... 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TrainingProgram Represents a training program for skills and experience related to standards ...","title":"Applicable Classes"},{"location":"collection/#properties","text":"Range: StandardsCollectionTag Multivalued: True","title":"Properties"},{"location":"collection/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"collection/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"collection/#linkml-source","text":"name: collection description: Tags for specific sets of standards. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: node_property domain: NamedThing multivalued: true alias: collection domain_of: - DataStandardOrTool range: StandardsCollectionTag","title":"LinkML Source"},{"location":"concerns_data_topic/","text":"Slot: concerns_data_topic Subject standard is generally applied in the context of object data topic. URI: https://w3id.org/bridge2ai/standards-schema-all/:concerns_data_topic Inheritance related_to concerns_data_topic Applicable Classes Name Description DataStandardOrTool Represents a standard or tool in the Bridge2AI Standards Registry DataStandard Represents a general purpose standard in the Bridge2AI Standards Registry BiomedicalStandard Represents a standard in the Bridge2AI Standards Registry with particular app... Registry Represents a resource in the Bridge2AI Standards Registry serving to curate a... OntologyOrVocabulary A set of concepts and categories, potentially defined or accompanied by their... ModelRepository Represents a resource in the Bridge2AI Standards Registry serving to curate a... ReferenceDataOrDataset Represents a resource in the Bridge2AI Standards Registry serving as a standa... SoftwareOrTool Represents a piece of software or computational tool in the Bridge2AI Standar... ReferenceImplementation Represents an implementation of one or more standards or tools in the Bridge2... TrainingProgram Represents a training program for skills and experience related to standards ... Properties Range: DataTopic Multivalued: True Identifier and Mapping Information Schema Source from schema: https://w3id.org/bridge2ai/standards-schema-all LinkML Source name: concerns_data_topic description: Subject standard is generally applied in the context of object data topic. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: related_to domain: DataStandardOrTool multivalued: true inherited: true alias: concerns_data_topic domain_of: - DataStandardOrTool range: DataTopic","title":"Slot: concerns_data_topic"},{"location":"concerns_data_topic/#slot-concerns_data_topic","text":"Subject standard is generally applied in the context of object data topic. URI: https://w3id.org/bridge2ai/standards-schema-all/:concerns_data_topic","title":"Slot: concerns_data_topic"},{"location":"concerns_data_topic/#inheritance","text":"related_to concerns_data_topic","title":"Inheritance"},{"location":"concerns_data_topic/#applicable-classes","text":"Name Description DataStandardOrTool Represents a standard or tool in the Bridge2AI Standards Registry DataStandard Represents a general purpose standard in the Bridge2AI Standards Registry BiomedicalStandard Represents a standard in the Bridge2AI Standards Registry with particular app... Registry Represents a resource in the Bridge2AI Standards Registry serving to curate a... OntologyOrVocabulary A set of concepts and categories, potentially defined or accompanied by their... ModelRepository Represents a resource in the Bridge2AI Standards Registry serving to curate a... ReferenceDataOrDataset Represents a resource in the Bridge2AI Standards Registry serving as a standa... 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TrainingProgram Represents a training program for skills and experience related to standards ...","title":"Applicable Classes"},{"location":"concerns_data_topic/#properties","text":"Range: DataTopic Multivalued: True","title":"Properties"},{"location":"concerns_data_topic/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"concerns_data_topic/#schema-source","text":"from schema: https://w3id.org/bridge2ai/standards-schema-all","title":"Schema Source"},{"location":"concerns_data_topic/#linkml-source","text":"name: concerns_data_topic description: Subject standard is generally applied in the context of object data topic. from_schema: https://w3id.org/bridge2ai/standards-schema-all rank: 1000 is_a: related_to domain: DataStandardOrTool multivalued: true inherited: true alias: concerns_data_topic domain_of: - DataStandardOrTool range: DataTopic","title":"LinkML Source"},{"location":"contribution_date/","text":"Slot: contribution_date The date on which the node was added. URI: https://w3id.org/bridge2ai/standards-schema-all/:contribution_date Inheritance node_property contribution_date Applicable Classes Name Description NamedThing A generic grouping for any identifiable entity UseCase Represents a use case for Bridge2AI standards DataStandardOrTool Represents a standard or tool in the Bridge2AI Standards Registry DataStandard Represents a general purpose standard in the Bridge2AI Standards Registry BiomedicalStandard Represents a standard in the Bridge2AI Standards Registry with particular app... Registry Represents a resource in the Bridge2AI Standards Registry serving to curate a... OntologyOrVocabulary A set of concepts and categories, potentially defined or accompanied by their... ModelRepository Represents a resource in the Bridge2AI Standards Registry serving to curate a... ReferenceDataOrDataset Represents a resource in the Bridge2AI Standards Registry serving as a standa... 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