diff --git a/docs/AnatomicalEntity.md b/docs/AnatomicalEntity.md
index 10b597c..2c287e2 100644
--- a/docs/AnatomicalEntity.md
+++ b/docs/AnatomicalEntity.md
@@ -1,17 +1,27 @@
+
+
# Class: AnatomicalEntity
+
+
_A subcellular location, cell type or gross anatomical part_
+
URI: [https://w3id.org/bridge2ai/standards-schema-all/:AnatomicalEntity](https://w3id.org/bridge2ai/standards-schema-all/:AnatomicalEntity)
+
+
+
```mermaid
classDiagram
class AnatomicalEntity
+ click AnatomicalEntity href "../AnatomicalEntity"
NamedThing <|-- AnatomicalEntity
+ click NamedThing href "../NamedThing"
AnatomicalEntity : category
@@ -31,11 +41,21 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:AnatomicalEntity](https:/
AnatomicalEntity : related_to
- AnatomicalEntity ..> NamedThing : related_to
+
+
+
+ AnatomicalEntity --> "*" NamedThing : related_to
+ click NamedThing href "../NamedThing"
+
AnatomicalEntity : subclass_of
- AnatomicalEntity ..> NamedThing : subclass_of
+
+
+
+ AnatomicalEntity --> "*" NamedThing : subclass_of
+ click NamedThing href "../NamedThing"
+
```
@@ -54,12 +74,12 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:AnatomicalEntity](https:/
| Name | Cardinality and Range | Description | Inheritance |
| --- | --- | --- | --- |
-| [id](id.md) | 1..1
[Uriorcurie](Uriorcurie.md) | A unique identifier for a thing | [NamedThing](NamedThing.md) |
+| [id](id.md) | 1
[Uriorcurie](Uriorcurie.md) | A unique identifier for a thing | [NamedThing](NamedThing.md) |
| [category](category.md) | 0..1
[CategoryType](CategoryType.md) | Name of the high level ontology class in which this entity is categorized | [NamedThing](NamedThing.md) |
| [name](name.md) | 0..1
[String](String.md) | A human-readable name for a thing | [NamedThing](NamedThing.md) |
| [description](description.md) | 0..1
[String](String.md) | A human-readable description for a thing | [NamedThing](NamedThing.md) |
-| [subclass_of](subclass_of.md) | 0..*
[NamedThing](NamedThing.md) | Holds between two classes where the domain class is a specialization of the r... | [NamedThing](NamedThing.md) |
-| [related_to](related_to.md) | 0..*
[NamedThing](NamedThing.md) | A relationship that is asserted between two named things | [NamedThing](NamedThing.md) |
+| [subclass_of](subclass_of.md) | *
[NamedThing](NamedThing.md) | Holds between two classes where the domain class is a specialization of the r... | [NamedThing](NamedThing.md) |
+| [related_to](related_to.md) | *
[NamedThing](NamedThing.md) | A relationship that is asserted between two named things | [NamedThing](NamedThing.md) |
| [contributor_name](contributor_name.md) | 0..1
[String](String.md) | The name of the person who added this node | [NamedThing](NamedThing.md) |
| [contributor_github_name](contributor_github_name.md) | 0..1
[String](String.md) | The name of the github user who added this node | [NamedThing](NamedThing.md) |
| [contributor_orcid](contributor_orcid.md) | 0..1
[Uriorcurie](Uriorcurie.md) | The ORCiD of the person who added this node | [NamedThing](NamedThing.md) |
@@ -104,7 +124,6 @@ Instances of this class *should* have identifiers with one of the following pref
-
## Mappings
| Mapping Type | Mapped Value |
@@ -118,6 +137,8 @@ Instances of this class *should* have identifiers with one of the following pref
+
+
## LinkML Source
@@ -136,7 +157,6 @@ exact_mappings:
- wikidata:Q4936952
narrow_mappings:
- ncit:C12219
-rank: 1000
is_a: NamedThing
```
@@ -156,7 +176,6 @@ exact_mappings:
- wikidata:Q4936952
narrow_mappings:
- ncit:C12219
-rank: 1000
is_a: NamedThing
attributes:
id:
@@ -221,20 +240,19 @@ attributes:
rank: 1000
is_a: related_to
domain: NamedThing
- multivalued: true
inherited: true
alias: subclass_of
owner: AnatomicalEntity
domain_of:
- NamedThing
range: NamedThing
+ multivalued: true
related_to:
name: related_to
description: A relationship that is asserted between two named things.
from_schema: https://w3id.org/bridge2ai/standards-schema-all
rank: 1000
domain: NamedThing
- multivalued: true
inherited: true
alias: related_to
owner: AnatomicalEntity
@@ -243,6 +261,7 @@ attributes:
- Organization
symmetric: true
range: NamedThing
+ multivalued: true
contributor_name:
name: contributor_name
description: The name of the person who added this node.
diff --git a/docs/BiomedicalStandard.md b/docs/BiomedicalStandard.md
index d8393d5..a8f873e 100644
--- a/docs/BiomedicalStandard.md
+++ b/docs/BiomedicalStandard.md
@@ -1,27 +1,47 @@
+
+
# Class: BiomedicalStandard
+
+
_Represents a standard in the Bridge2AI Standards Registry with particular applications or relevance to clinical or biomedical research purposes._
+
URI: [https://w3id.org/bridge2ai/standards-schema-all/:BiomedicalStandard](https://w3id.org/bridge2ai/standards-schema-all/:BiomedicalStandard)
+
+
+
```mermaid
classDiagram
class BiomedicalStandard
+ click BiomedicalStandard href "../BiomedicalStandard"
DataStandard <|-- BiomedicalStandard
+ click DataStandard href "../DataStandard"
BiomedicalStandard : category
BiomedicalStandard : collection
- BiomedicalStandard ..> StandardsCollectionTag : collection
+
+
+
+ BiomedicalStandard --> "*" StandardsCollectionTag : collection
+ click StandardsCollectionTag href "../StandardsCollectionTag"
+
BiomedicalStandard : concerns_data_topic
- BiomedicalStandard ..> DataTopic : concerns_data_topic
+
+
+
+ BiomedicalStandard --> "*" DataTopic : concerns_data_topic
+ click DataTopic href "../DataTopic"
+
BiomedicalStandard : contribution_date
@@ -37,7 +57,21 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:BiomedicalStandard](https
BiomedicalStandard : has_relevant_organization
- BiomedicalStandard ..> Organization : has_relevant_organization
+
+
+
+ BiomedicalStandard --> "*" Organization : has_relevant_organization
+ click Organization href "../Organization"
+
+
+ BiomedicalStandard : has_training_resource
+
+
+
+
+ BiomedicalStandard --> "*" DataStandardOrTool : has_training_resource
+ click DataStandardOrTool href "../DataStandardOrTool"
+
BiomedicalStandard : id
@@ -53,13 +87,23 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:BiomedicalStandard](https
BiomedicalStandard : related_to
- BiomedicalStandard ..> NamedThing : related_to
+
+
+
+ BiomedicalStandard --> "*" NamedThing : related_to
+ click NamedThing href "../NamedThing"
+
BiomedicalStandard : requires_registration
BiomedicalStandard : subclass_of
- BiomedicalStandard ..> NamedThing : subclass_of
+
+
+
+ BiomedicalStandard --> "*" NamedThing : subclass_of
+ click NamedThing href "../NamedThing"
+
BiomedicalStandard : url
@@ -82,22 +126,23 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:BiomedicalStandard](https
| Name | Cardinality and Range | Description | Inheritance |
| --- | --- | --- | --- |
-| [collection](collection.md) | 0..*
[StandardsCollectionTag](StandardsCollectionTag.md) | Tags for specific sets of standards | [DataStandardOrTool](DataStandardOrTool.md) |
-| [concerns_data_topic](concerns_data_topic.md) | 0..*
[DataTopic](DataTopic.md) | Subject standard is generally applied in the context of object data topic | [DataStandardOrTool](DataStandardOrTool.md) |
-| [has_relevant_organization](has_relevant_organization.md) | 0..*
[Organization](Organization.md) | Subject standard is managed or otherwise guided buy the object organization(s... | [DataStandardOrTool](DataStandardOrTool.md) |
+| [collection](collection.md) | *
[StandardsCollectionTag](StandardsCollectionTag.md) | Tags for specific sets of standards | [DataStandardOrTool](DataStandardOrTool.md) |
+| [concerns_data_topic](concerns_data_topic.md) | *
[DataTopic](DataTopic.md) | Subject standard is generally applied in the context of object data topic | [DataStandardOrTool](DataStandardOrTool.md) |
+| [has_relevant_organization](has_relevant_organization.md) | *
[Organization](Organization.md) | Subject standard is managed or otherwise guided buy the object organization(s... | [DataStandardOrTool](DataStandardOrTool.md) |
+| [has_training_resource](has_training_resource.md) | *
[DataStandardOrTool](DataStandardOrTool.md) | Relevant training resources, standard usage manuals, or other documentation f... | [DataStandardOrTool](DataStandardOrTool.md) |
| [purpose_detail](purpose_detail.md) | 0..1
[String](String.md) | Text description of the standard or tool | [DataStandardOrTool](DataStandardOrTool.md) |
| [is_open](is_open.md) | 0..1
[Boolean](Boolean.md) | Is the standard or tool FAIR and available free of cost? | [DataStandardOrTool](DataStandardOrTool.md) |
-| [requires_registration](requires_registration.md) | 0..1
[Boolean](Boolean.md) | Does usage of the standard or tool require registrion of a user or group with... | [DataStandardOrTool](DataStandardOrTool.md) |
+| [requires_registration](requires_registration.md) | 0..1
[Boolean](Boolean.md) | Does usage of the standard or tool require registration of a user or group wi... | [DataStandardOrTool](DataStandardOrTool.md) |
| [url](url.md) | 0..1
[Uriorcurie](Uriorcurie.md) | URL for basic documentation of the standard or tool | [DataStandardOrTool](DataStandardOrTool.md) |
| [publication](publication.md) | 0..1
[Uriorcurie](Uriorcurie.md) | Relevant publication for the standard or tool | [DataStandardOrTool](DataStandardOrTool.md) |
| [formal_specification](formal_specification.md) | 0..1
[Uriorcurie](Uriorcurie.md) | Relevant code repository or other location for a formal specification of the ... | [DataStandardOrTool](DataStandardOrTool.md) |
| [not_relevant_to_dgps](not_relevant_to_dgps.md) | 0..1
[Boolean](Boolean.md) | Is the standard or tool currently relevant to DGPs? | [DataStandardOrTool](DataStandardOrTool.md) |
-| [id](id.md) | 1..1
[Uriorcurie](Uriorcurie.md) | A unique identifier for a thing | [NamedThing](NamedThing.md) |
+| [id](id.md) | 1
[Uriorcurie](Uriorcurie.md) | A unique identifier for a thing | [NamedThing](NamedThing.md) |
| [category](category.md) | 0..1
[CategoryType](CategoryType.md) | Name of the high level ontology class in which this entity is categorized | [NamedThing](NamedThing.md) |
| [name](name.md) | 0..1
[String](String.md) | A human-readable name for a thing | [NamedThing](NamedThing.md) |
| [description](description.md) | 0..1
[String](String.md) | A human-readable description for a thing | [NamedThing](NamedThing.md) |
-| [subclass_of](subclass_of.md) | 0..*
[NamedThing](NamedThing.md) | Holds between two classes where the domain class is a specialization of the r... | [NamedThing](NamedThing.md) |
-| [related_to](related_to.md) | 0..*
[NamedThing](NamedThing.md) | A relationship that is asserted between two named things | [NamedThing](NamedThing.md) |
+| [subclass_of](subclass_of.md) | *
[NamedThing](NamedThing.md) | Holds between two classes where the domain class is a specialization of the r... | [NamedThing](NamedThing.md) |
+| [related_to](related_to.md) | *
[NamedThing](NamedThing.md) | A relationship that is asserted between two named things | [NamedThing](NamedThing.md) |
| [contributor_name](contributor_name.md) | 0..1
[String](String.md) | The name of the person who added this node | [NamedThing](NamedThing.md) |
| [contributor_github_name](contributor_github_name.md) | 0..1
[String](String.md) | The name of the github user who added this node | [NamedThing](NamedThing.md) |
| [contributor_orcid](contributor_orcid.md) | 0..1
[Uriorcurie](Uriorcurie.md) | The ORCiD of the person who added this node | [NamedThing](NamedThing.md) |
@@ -127,7 +172,6 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:BiomedicalStandard](https
-
## Mappings
| Mapping Type | Mapped Value |
@@ -139,6 +183,8 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:BiomedicalStandard](https
+
+
## LinkML Source
@@ -151,7 +197,6 @@ name: BiomedicalStandard
description: Represents a standard in the Bridge2AI Standards Registry with particular
applications or relevance to clinical or biomedical research purposes.
from_schema: https://w3id.org/bridge2ai/standards-schema-all
-rank: 1000
is_a: DataStandard
```
@@ -165,7 +210,6 @@ name: BiomedicalStandard
description: Represents a standard in the Bridge2AI Standards Registry with particular
applications or relevance to clinical or biomedical research purposes.
from_schema: https://w3id.org/bridge2ai/standards-schema-all
-rank: 1000
is_a: DataStandard
attributes:
collection:
@@ -175,12 +219,12 @@ attributes:
rank: 1000
is_a: node_property
domain: NamedThing
- multivalued: true
alias: collection
owner: BiomedicalStandard
domain_of:
- DataStandardOrTool
range: StandardsCollectionTag
+ multivalued: true
concerns_data_topic:
name: concerns_data_topic
description: Subject standard is generally applied in the context of object data
@@ -189,13 +233,13 @@ attributes:
rank: 1000
is_a: related_to
domain: DataStandardOrTool
- multivalued: true
inherited: true
alias: concerns_data_topic
owner: BiomedicalStandard
domain_of:
- DataStandardOrTool
range: DataTopic
+ multivalued: true
has_relevant_organization:
name: has_relevant_organization
description: Subject standard is managed or otherwise guided buy the object organization(s).
@@ -203,13 +247,27 @@ attributes:
rank: 1000
is_a: related_to
domain: DataStandardOrTool
- multivalued: true
inherited: true
alias: has_relevant_organization
owner: BiomedicalStandard
domain_of:
- DataStandardOrTool
range: Organization
+ multivalued: true
+ has_training_resource:
+ name: has_training_resource
+ description: Relevant training resources, standard usage manuals, or other documentation
+ for the standard or tool.
+ from_schema: https://w3id.org/bridge2ai/standards-schema-all
+ rank: 1000
+ is_a: node_property
+ domain: NamedThing
+ alias: has_training_resource
+ owner: BiomedicalStandard
+ domain_of:
+ - DataStandardOrTool
+ range: DataStandardOrTool
+ multivalued: true
purpose_detail:
name: purpose_detail
description: Text description of the standard or tool.
@@ -236,8 +294,8 @@ attributes:
range: boolean
requires_registration:
name: requires_registration
- description: Does usage of the standard or tool require registrion of a user or
- group with some organization or managerial body?
+ description: Does usage of the standard or tool require registration of a user
+ or group with some organization or managerial body?
from_schema: https://w3id.org/bridge2ai/standards-schema-all
rank: 1000
is_a: node_property
@@ -359,20 +417,19 @@ attributes:
rank: 1000
is_a: related_to
domain: NamedThing
- multivalued: true
inherited: true
alias: subclass_of
owner: BiomedicalStandard
domain_of:
- NamedThing
range: NamedThing
+ multivalued: true
related_to:
name: related_to
description: A relationship that is asserted between two named things.
from_schema: https://w3id.org/bridge2ai/standards-schema-all
rank: 1000
domain: NamedThing
- multivalued: true
inherited: true
alias: related_to
owner: BiomedicalStandard
@@ -381,6 +438,7 @@ attributes:
- Organization
symmetric: true
range: NamedThing
+ multivalued: true
contributor_name:
name: contributor_name
description: The name of the person who added this node.
diff --git a/docs/Boolean.md b/docs/Boolean.md
index e3b27cc..719dbfb 100644
--- a/docs/Boolean.md
+++ b/docs/Boolean.md
@@ -1,9 +1,12 @@
# Type: Boolean
+
+
_A binary (true or false) value_
+
URI: [xsd:boolean](http://www.w3.org/2001/XMLSchema#boolean)
* [base](https://w3id.org/linkml/base): Bool
@@ -34,3 +37,14 @@ URI: [xsd:boolean](http://www.w3.org/2001/XMLSchema#boolean)
+
+## Mappings
+
+| Mapping Type | Mapped Value |
+| --- | --- |
+| self | xsd:boolean |
+| native | https://w3id.org/bridge2ai/standards-schema-all/:boolean |
+| exact | schema:Boolean |
+
+
+
diff --git a/docs/CategoryType.md b/docs/CategoryType.md
index 5dcc0d6..5e018ac 100644
--- a/docs/CategoryType.md
+++ b/docs/CategoryType.md
@@ -1,9 +1,12 @@
# Type: CategoryType
+
+
_A primitive type in which the value denotes a class within the model._
+
URI: [xsd:anyURI](http://www.w3.org/2001/XMLSchema#anyURI)
* [base](https://w3id.org/linkml/base): URIorCURIE
@@ -35,3 +38,13 @@ URI: [xsd:anyURI](http://www.w3.org/2001/XMLSchema#anyURI)
+
+## Mappings
+
+| Mapping Type | Mapped Value |
+| --- | --- |
+| self | https://w3id.org/bridge2ai/standards-schema-all/:category_type |
+| native | https://w3id.org/bridge2ai/standards-schema-all/:category_type |
+
+
+
diff --git a/docs/Curie.md b/docs/Curie.md
index c5cb6b4..ae5f583 100644
--- a/docs/Curie.md
+++ b/docs/Curie.md
@@ -1,9 +1,12 @@
# Type: Curie
+
+
_a compact URI_
+
URI: [xsd:string](http://www.w3.org/2001/XMLSchema#string)
* [base](https://w3id.org/linkml/base): Curie
@@ -39,3 +42,13 @@ URI: [xsd:string](http://www.w3.org/2001/XMLSchema#string)
+
+## Mappings
+
+| Mapping Type | Mapped Value |
+| --- | --- |
+| self | xsd:string |
+| native | https://w3id.org/bridge2ai/standards-schema-all/:curie |
+
+
+
diff --git a/docs/DataGeneratingProject.md b/docs/DataGeneratingProject.md
index 9c2643a..042628b 100644
--- a/docs/DataGeneratingProject.md
+++ b/docs/DataGeneratingProject.md
@@ -1,10 +1,13 @@
# Enum: DataGeneratingProject
+
+
_One of the Bridge2AI Data Generating Projects._
-URI: [DataGeneratingProject](DataGeneratingProject)
+
+URI: [DataGeneratingProject](DataGeneratingProject.md)
## Permissible Values
@@ -45,6 +48,8 @@ URI: [DataGeneratingProject](DataGeneratingProject)
+
+
## LinkML Source
diff --git a/docs/DataStandard.md b/docs/DataStandard.md
index dc12e73..bee574d 100644
--- a/docs/DataStandard.md
+++ b/docs/DataStandard.md
@@ -1,31 +1,52 @@
+
+
# Class: DataStandard
+
+
_Represents a general purpose standard in the Bridge2AI Standards Registry._
+
URI: [https://w3id.org/bridge2ai/standards-schema-all/:DataStandard](https://w3id.org/bridge2ai/standards-schema-all/:DataStandard)
+
+
+
```mermaid
classDiagram
class DataStandard
+ click DataStandard href "../DataStandard"
DataStandardOrTool <|-- DataStandard
+ click DataStandardOrTool href "../DataStandardOrTool"
DataStandard <|-- BiomedicalStandard
+ click BiomedicalStandard href "../BiomedicalStandard"
DataStandard : category
DataStandard : collection
- DataStandard ..> StandardsCollectionTag : collection
+
+
+
+ DataStandard --> "*" StandardsCollectionTag : collection
+ click StandardsCollectionTag href "../StandardsCollectionTag"
+
DataStandard : concerns_data_topic
- DataStandard ..> DataTopic : concerns_data_topic
+
+
+
+ DataStandard --> "*" DataTopic : concerns_data_topic
+ click DataTopic href "../DataTopic"
+
DataStandard : contribution_date
@@ -41,7 +62,21 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:DataStandard](https://w3i
DataStandard : has_relevant_organization
- DataStandard ..> Organization : has_relevant_organization
+
+
+
+ DataStandard --> "*" Organization : has_relevant_organization
+ click Organization href "../Organization"
+
+
+ DataStandard : has_training_resource
+
+
+
+
+ DataStandard --> "*" DataStandardOrTool : has_training_resource
+ click DataStandardOrTool href "../DataStandardOrTool"
+
DataStandard : id
@@ -57,13 +92,23 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:DataStandard](https://w3i
DataStandard : related_to
- DataStandard ..> NamedThing : related_to
+
+
+
+ DataStandard --> "*" NamedThing : related_to
+ click NamedThing href "../NamedThing"
+
DataStandard : requires_registration
DataStandard : subclass_of
- DataStandard ..> NamedThing : subclass_of
+
+
+
+ DataStandard --> "*" NamedThing : subclass_of
+ click NamedThing href "../NamedThing"
+
DataStandard : url
@@ -86,22 +131,23 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:DataStandard](https://w3i
| Name | Cardinality and Range | Description | Inheritance |
| --- | --- | --- | --- |
-| [collection](collection.md) | 0..*
[StandardsCollectionTag](StandardsCollectionTag.md) | Tags for specific sets of standards | [DataStandardOrTool](DataStandardOrTool.md) |
-| [concerns_data_topic](concerns_data_topic.md) | 0..*
[DataTopic](DataTopic.md) | Subject standard is generally applied in the context of object data topic | [DataStandardOrTool](DataStandardOrTool.md) |
-| [has_relevant_organization](has_relevant_organization.md) | 0..*
[Organization](Organization.md) | Subject standard is managed or otherwise guided buy the object organization(s... | [DataStandardOrTool](DataStandardOrTool.md) |
+| [collection](collection.md) | *
[StandardsCollectionTag](StandardsCollectionTag.md) | Tags for specific sets of standards | [DataStandardOrTool](DataStandardOrTool.md) |
+| [concerns_data_topic](concerns_data_topic.md) | *
[DataTopic](DataTopic.md) | Subject standard is generally applied in the context of object data topic | [DataStandardOrTool](DataStandardOrTool.md) |
+| [has_relevant_organization](has_relevant_organization.md) | *
[Organization](Organization.md) | Subject standard is managed or otherwise guided buy the object organization(s... | [DataStandardOrTool](DataStandardOrTool.md) |
+| [has_training_resource](has_training_resource.md) | *
[DataStandardOrTool](DataStandardOrTool.md) | Relevant training resources, standard usage manuals, or other documentation f... | [DataStandardOrTool](DataStandardOrTool.md) |
| [purpose_detail](purpose_detail.md) | 0..1
[String](String.md) | Text description of the standard or tool | [DataStandardOrTool](DataStandardOrTool.md) |
| [is_open](is_open.md) | 0..1
[Boolean](Boolean.md) | Is the standard or tool FAIR and available free of cost? | [DataStandardOrTool](DataStandardOrTool.md) |
-| [requires_registration](requires_registration.md) | 0..1
[Boolean](Boolean.md) | Does usage of the standard or tool require registrion of a user or group with... | [DataStandardOrTool](DataStandardOrTool.md) |
+| [requires_registration](requires_registration.md) | 0..1
[Boolean](Boolean.md) | Does usage of the standard or tool require registration of a user or group wi... | [DataStandardOrTool](DataStandardOrTool.md) |
| [url](url.md) | 0..1
[Uriorcurie](Uriorcurie.md) | URL for basic documentation of the standard or tool | [DataStandardOrTool](DataStandardOrTool.md) |
| [publication](publication.md) | 0..1
[Uriorcurie](Uriorcurie.md) | Relevant publication for the standard or tool | [DataStandardOrTool](DataStandardOrTool.md) |
| [formal_specification](formal_specification.md) | 0..1
[Uriorcurie](Uriorcurie.md) | Relevant code repository or other location for a formal specification of the ... | [DataStandardOrTool](DataStandardOrTool.md) |
| [not_relevant_to_dgps](not_relevant_to_dgps.md) | 0..1
[Boolean](Boolean.md) | Is the standard or tool currently relevant to DGPs? | [DataStandardOrTool](DataStandardOrTool.md) |
-| [id](id.md) | 1..1
[Uriorcurie](Uriorcurie.md) | A unique identifier for a thing | [NamedThing](NamedThing.md) |
+| [id](id.md) | 1
[Uriorcurie](Uriorcurie.md) | A unique identifier for a thing | [NamedThing](NamedThing.md) |
| [category](category.md) | 0..1
[CategoryType](CategoryType.md) | Name of the high level ontology class in which this entity is categorized | [NamedThing](NamedThing.md) |
| [name](name.md) | 0..1
[String](String.md) | A human-readable name for a thing | [NamedThing](NamedThing.md) |
| [description](description.md) | 0..1
[String](String.md) | A human-readable description for a thing | [NamedThing](NamedThing.md) |
-| [subclass_of](subclass_of.md) | 0..*
[NamedThing](NamedThing.md) | Holds between two classes where the domain class is a specialization of the r... | [NamedThing](NamedThing.md) |
-| [related_to](related_to.md) | 0..*
[NamedThing](NamedThing.md) | A relationship that is asserted between two named things | [NamedThing](NamedThing.md) |
+| [subclass_of](subclass_of.md) | *
[NamedThing](NamedThing.md) | Holds between two classes where the domain class is a specialization of the r... | [NamedThing](NamedThing.md) |
+| [related_to](related_to.md) | *
[NamedThing](NamedThing.md) | A relationship that is asserted between two named things | [NamedThing](NamedThing.md) |
| [contributor_name](contributor_name.md) | 0..1
[String](String.md) | The name of the person who added this node | [NamedThing](NamedThing.md) |
| [contributor_github_name](contributor_github_name.md) | 0..1
[String](String.md) | The name of the github user who added this node | [NamedThing](NamedThing.md) |
| [contributor_orcid](contributor_orcid.md) | 0..1
[Uriorcurie](Uriorcurie.md) | The ORCiD of the person who added this node | [NamedThing](NamedThing.md) |
@@ -131,7 +177,6 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:DataStandard](https://w3i
-
## Mappings
| Mapping Type | Mapped Value |
@@ -143,6 +188,8 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:DataStandard](https://w3i
+
+
## LinkML Source
@@ -154,7 +201,6 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:DataStandard](https://w3i
name: DataStandard
description: Represents a general purpose standard in the Bridge2AI Standards Registry.
from_schema: https://w3id.org/bridge2ai/standards-schema-all
-rank: 1000
is_a: DataStandardOrTool
```
@@ -167,7 +213,6 @@ is_a: DataStandardOrTool
name: DataStandard
description: Represents a general purpose standard in the Bridge2AI Standards Registry.
from_schema: https://w3id.org/bridge2ai/standards-schema-all
-rank: 1000
is_a: DataStandardOrTool
attributes:
collection:
@@ -177,12 +222,12 @@ attributes:
rank: 1000
is_a: node_property
domain: NamedThing
- multivalued: true
alias: collection
owner: DataStandard
domain_of:
- DataStandardOrTool
range: StandardsCollectionTag
+ multivalued: true
concerns_data_topic:
name: concerns_data_topic
description: Subject standard is generally applied in the context of object data
@@ -191,13 +236,13 @@ attributes:
rank: 1000
is_a: related_to
domain: DataStandardOrTool
- multivalued: true
inherited: true
alias: concerns_data_topic
owner: DataStandard
domain_of:
- DataStandardOrTool
range: DataTopic
+ multivalued: true
has_relevant_organization:
name: has_relevant_organization
description: Subject standard is managed or otherwise guided buy the object organization(s).
@@ -205,13 +250,27 @@ attributes:
rank: 1000
is_a: related_to
domain: DataStandardOrTool
- multivalued: true
inherited: true
alias: has_relevant_organization
owner: DataStandard
domain_of:
- DataStandardOrTool
range: Organization
+ multivalued: true
+ has_training_resource:
+ name: has_training_resource
+ description: Relevant training resources, standard usage manuals, or other documentation
+ for the standard or tool.
+ from_schema: https://w3id.org/bridge2ai/standards-schema-all
+ rank: 1000
+ is_a: node_property
+ domain: NamedThing
+ alias: has_training_resource
+ owner: DataStandard
+ domain_of:
+ - DataStandardOrTool
+ range: DataStandardOrTool
+ multivalued: true
purpose_detail:
name: purpose_detail
description: Text description of the standard or tool.
@@ -238,8 +297,8 @@ attributes:
range: boolean
requires_registration:
name: requires_registration
- description: Does usage of the standard or tool require registrion of a user or
- group with some organization or managerial body?
+ description: Does usage of the standard or tool require registration of a user
+ or group with some organization or managerial body?
from_schema: https://w3id.org/bridge2ai/standards-schema-all
rank: 1000
is_a: node_property
@@ -361,20 +420,19 @@ attributes:
rank: 1000
is_a: related_to
domain: NamedThing
- multivalued: true
inherited: true
alias: subclass_of
owner: DataStandard
domain_of:
- NamedThing
range: NamedThing
+ multivalued: true
related_to:
name: related_to
description: A relationship that is asserted between two named things.
from_schema: https://w3id.org/bridge2ai/standards-schema-all
rank: 1000
domain: NamedThing
- multivalued: true
inherited: true
alias: related_to
owner: DataStandard
@@ -383,6 +441,7 @@ attributes:
- Organization
symmetric: true
range: NamedThing
+ multivalued: true
contributor_name:
name: contributor_name
description: The name of the person who added this node.
diff --git a/docs/DataStandardOrTool.md b/docs/DataStandardOrTool.md
index 8ee225c..1a1f852 100644
--- a/docs/DataStandardOrTool.md
+++ b/docs/DataStandardOrTool.md
@@ -1,38 +1,66 @@
+
+
# Class: DataStandardOrTool
+
+
_Represents a standard or tool in the Bridge2AI Standards Registry._
+
URI: [https://w3id.org/bridge2ai/standards-schema-all/:DataStandardOrTool](https://w3id.org/bridge2ai/standards-schema-all/:DataStandardOrTool)
+
+
+
```mermaid
classDiagram
class DataStandardOrTool
+ click DataStandardOrTool href "../DataStandardOrTool"
NamedThing <|-- DataStandardOrTool
+ click NamedThing href "../NamedThing"
DataStandardOrTool <|-- DataStandard
+ click DataStandard href "../DataStandard"
DataStandardOrTool <|-- Registry
+ click Registry href "../Registry"
DataStandardOrTool <|-- OntologyOrVocabulary
+ click OntologyOrVocabulary href "../OntologyOrVocabulary"
DataStandardOrTool <|-- ModelRepository
+ click ModelRepository href "../ModelRepository"
DataStandardOrTool <|-- ReferenceDataOrDataset
+ click ReferenceDataOrDataset href "../ReferenceDataOrDataset"
DataStandardOrTool <|-- SoftwareOrTool
+ click SoftwareOrTool href "../SoftwareOrTool"
DataStandardOrTool <|-- ReferenceImplementation
+ click ReferenceImplementation href "../ReferenceImplementation"
DataStandardOrTool <|-- TrainingProgram
+ click TrainingProgram href "../TrainingProgram"
DataStandardOrTool : category
DataStandardOrTool : collection
- DataStandardOrTool ..> StandardsCollectionTag : collection
+
+
+
+ DataStandardOrTool --> "*" StandardsCollectionTag : collection
+ click StandardsCollectionTag href "../StandardsCollectionTag"
+
DataStandardOrTool : concerns_data_topic
- DataStandardOrTool ..> DataTopic : concerns_data_topic
+
+
+
+ DataStandardOrTool --> "*" DataTopic : concerns_data_topic
+ click DataTopic href "../DataTopic"
+
DataStandardOrTool : contribution_date
@@ -48,7 +76,21 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:DataStandardOrTool](https
DataStandardOrTool : has_relevant_organization
- DataStandardOrTool ..> Organization : has_relevant_organization
+
+
+
+ DataStandardOrTool --> "*" Organization : has_relevant_organization
+ click Organization href "../Organization"
+
+
+ DataStandardOrTool : has_training_resource
+
+
+
+
+ DataStandardOrTool --> "*" DataStandardOrTool : has_training_resource
+ click DataStandardOrTool href "../DataStandardOrTool"
+
DataStandardOrTool : id
@@ -64,13 +106,23 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:DataStandardOrTool](https
DataStandardOrTool : related_to
- DataStandardOrTool ..> NamedThing : related_to
+
+
+
+ DataStandardOrTool --> "*" NamedThing : related_to
+ click NamedThing href "../NamedThing"
+
DataStandardOrTool : requires_registration
DataStandardOrTool : subclass_of
- DataStandardOrTool ..> NamedThing : subclass_of
+
+
+
+ DataStandardOrTool --> "*" NamedThing : subclass_of
+ click NamedThing href "../NamedThing"
+
DataStandardOrTool : url
@@ -99,22 +151,23 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:DataStandardOrTool](https
| Name | Cardinality and Range | Description | Inheritance |
| --- | --- | --- | --- |
-| [collection](collection.md) | 0..*
[StandardsCollectionTag](StandardsCollectionTag.md) | Tags for specific sets of standards | direct |
-| [concerns_data_topic](concerns_data_topic.md) | 0..*
[DataTopic](DataTopic.md) | Subject standard is generally applied in the context of object data topic | direct |
-| [has_relevant_organization](has_relevant_organization.md) | 0..*
[Organization](Organization.md) | Subject standard is managed or otherwise guided buy the object organization(s... | direct |
+| [collection](collection.md) | *
[StandardsCollectionTag](StandardsCollectionTag.md) | Tags for specific sets of standards | direct |
+| [concerns_data_topic](concerns_data_topic.md) | *
[DataTopic](DataTopic.md) | Subject standard is generally applied in the context of object data topic | direct |
+| [has_relevant_organization](has_relevant_organization.md) | *
[Organization](Organization.md) | Subject standard is managed or otherwise guided buy the object organization(s... | direct |
+| [has_training_resource](has_training_resource.md) | *
[DataStandardOrTool](DataStandardOrTool.md) | Relevant training resources, standard usage manuals, or other documentation f... | direct |
| [purpose_detail](purpose_detail.md) | 0..1
[String](String.md) | Text description of the standard or tool | direct |
| [is_open](is_open.md) | 0..1
[Boolean](Boolean.md) | Is the standard or tool FAIR and available free of cost? | direct |
-| [requires_registration](requires_registration.md) | 0..1
[Boolean](Boolean.md) | Does usage of the standard or tool require registrion of a user or group with... | direct |
+| [requires_registration](requires_registration.md) | 0..1
[Boolean](Boolean.md) | Does usage of the standard or tool require registration of a user or group wi... | direct |
| [url](url.md) | 0..1
[Uriorcurie](Uriorcurie.md) | URL for basic documentation of the standard or tool | direct |
| [publication](publication.md) | 0..1
[Uriorcurie](Uriorcurie.md) | Relevant publication for the standard or tool | direct |
| [formal_specification](formal_specification.md) | 0..1
[Uriorcurie](Uriorcurie.md) | Relevant code repository or other location for a formal specification of the ... | direct |
| [not_relevant_to_dgps](not_relevant_to_dgps.md) | 0..1
[Boolean](Boolean.md) | Is the standard or tool currently relevant to DGPs? | direct |
-| [id](id.md) | 1..1
[Uriorcurie](Uriorcurie.md) | A unique identifier for a thing | [NamedThing](NamedThing.md) |
+| [id](id.md) | 1
[Uriorcurie](Uriorcurie.md) | A unique identifier for a thing | [NamedThing](NamedThing.md) |
| [category](category.md) | 0..1
[CategoryType](CategoryType.md) | Name of the high level ontology class in which this entity is categorized | [NamedThing](NamedThing.md) |
| [name](name.md) | 0..1
[String](String.md) | A human-readable name for a thing | [NamedThing](NamedThing.md) |
| [description](description.md) | 0..1
[String](String.md) | A human-readable description for a thing | [NamedThing](NamedThing.md) |
-| [subclass_of](subclass_of.md) | 0..*
[NamedThing](NamedThing.md) | Holds between two classes where the domain class is a specialization of the r... | [NamedThing](NamedThing.md) |
-| [related_to](related_to.md) | 0..*
[NamedThing](NamedThing.md) | A relationship that is asserted between two named things | [NamedThing](NamedThing.md) |
+| [subclass_of](subclass_of.md) | *
[NamedThing](NamedThing.md) | Holds between two classes where the domain class is a specialization of the r... | [NamedThing](NamedThing.md) |
+| [related_to](related_to.md) | *
[NamedThing](NamedThing.md) | A relationship that is asserted between two named things | [NamedThing](NamedThing.md) |
| [contributor_name](contributor_name.md) | 0..1
[String](String.md) | The name of the person who added this node | [NamedThing](NamedThing.md) |
| [contributor_github_name](contributor_github_name.md) | 0..1
[String](String.md) | The name of the github user who added this node | [NamedThing](NamedThing.md) |
| [contributor_orcid](contributor_orcid.md) | 0..1
[Uriorcurie](Uriorcurie.md) | The ORCiD of the person who added this node | [NamedThing](NamedThing.md) |
@@ -128,29 +181,39 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:DataStandardOrTool](https
| used by | used in | type | used |
| --- | --- | --- | --- |
-| [UseCase](UseCase.md) | [standards_and_tools_for_dgp_use](standards_and_tools_for_dgp_use.md) | range | [DataStandardOrTool](DataStandardOrTool.md) |
-| [UseCase](UseCase.md) | [alternative_standards_and_tools](alternative_standards_and_tools.md) | range | [DataStandardOrTool](DataStandardOrTool.md) |
| [DataStandardOrTool](DataStandardOrTool.md) | [concerns_data_topic](concerns_data_topic.md) | domain | [DataStandardOrTool](DataStandardOrTool.md) |
| [DataStandardOrTool](DataStandardOrTool.md) | [has_relevant_organization](has_relevant_organization.md) | domain | [DataStandardOrTool](DataStandardOrTool.md) |
+| [DataStandardOrTool](DataStandardOrTool.md) | [has_training_resource](has_training_resource.md) | range | [DataStandardOrTool](DataStandardOrTool.md) |
| [DataStandard](DataStandard.md) | [concerns_data_topic](concerns_data_topic.md) | domain | [DataStandardOrTool](DataStandardOrTool.md) |
| [DataStandard](DataStandard.md) | [has_relevant_organization](has_relevant_organization.md) | domain | [DataStandardOrTool](DataStandardOrTool.md) |
+| [DataStandard](DataStandard.md) | [has_training_resource](has_training_resource.md) | range | [DataStandardOrTool](DataStandardOrTool.md) |
| [BiomedicalStandard](BiomedicalStandard.md) | [concerns_data_topic](concerns_data_topic.md) | domain | [DataStandardOrTool](DataStandardOrTool.md) |
| [BiomedicalStandard](BiomedicalStandard.md) | [has_relevant_organization](has_relevant_organization.md) | domain | [DataStandardOrTool](DataStandardOrTool.md) |
+| [BiomedicalStandard](BiomedicalStandard.md) | [has_training_resource](has_training_resource.md) | range | [DataStandardOrTool](DataStandardOrTool.md) |
| [Registry](Registry.md) | [concerns_data_topic](concerns_data_topic.md) | domain | [DataStandardOrTool](DataStandardOrTool.md) |
| [Registry](Registry.md) | [has_relevant_organization](has_relevant_organization.md) | domain | [DataStandardOrTool](DataStandardOrTool.md) |
+| [Registry](Registry.md) | [has_training_resource](has_training_resource.md) | range | [DataStandardOrTool](DataStandardOrTool.md) |
| [OntologyOrVocabulary](OntologyOrVocabulary.md) | [concerns_data_topic](concerns_data_topic.md) | domain | [DataStandardOrTool](DataStandardOrTool.md) |
| [OntologyOrVocabulary](OntologyOrVocabulary.md) | [has_relevant_organization](has_relevant_organization.md) | domain | [DataStandardOrTool](DataStandardOrTool.md) |
+| [OntologyOrVocabulary](OntologyOrVocabulary.md) | [has_training_resource](has_training_resource.md) | range | [DataStandardOrTool](DataStandardOrTool.md) |
| [ModelRepository](ModelRepository.md) | [concerns_data_topic](concerns_data_topic.md) | domain | [DataStandardOrTool](DataStandardOrTool.md) |
| [ModelRepository](ModelRepository.md) | [has_relevant_organization](has_relevant_organization.md) | domain | [DataStandardOrTool](DataStandardOrTool.md) |
+| [ModelRepository](ModelRepository.md) | [has_training_resource](has_training_resource.md) | range | [DataStandardOrTool](DataStandardOrTool.md) |
| [ReferenceDataOrDataset](ReferenceDataOrDataset.md) | [concerns_data_topic](concerns_data_topic.md) | domain | [DataStandardOrTool](DataStandardOrTool.md) |
| [ReferenceDataOrDataset](ReferenceDataOrDataset.md) | [has_relevant_organization](has_relevant_organization.md) | domain | [DataStandardOrTool](DataStandardOrTool.md) |
+| [ReferenceDataOrDataset](ReferenceDataOrDataset.md) | [has_training_resource](has_training_resource.md) | range | [DataStandardOrTool](DataStandardOrTool.md) |
| [SoftwareOrTool](SoftwareOrTool.md) | [concerns_data_topic](concerns_data_topic.md) | domain | [DataStandardOrTool](DataStandardOrTool.md) |
| [SoftwareOrTool](SoftwareOrTool.md) | [has_relevant_organization](has_relevant_organization.md) | domain | [DataStandardOrTool](DataStandardOrTool.md) |
+| [SoftwareOrTool](SoftwareOrTool.md) | [has_training_resource](has_training_resource.md) | range | [DataStandardOrTool](DataStandardOrTool.md) |
| [ReferenceImplementation](ReferenceImplementation.md) | [concerns_data_topic](concerns_data_topic.md) | domain | [DataStandardOrTool](DataStandardOrTool.md) |
| [ReferenceImplementation](ReferenceImplementation.md) | [has_relevant_organization](has_relevant_organization.md) | domain | [DataStandardOrTool](DataStandardOrTool.md) |
+| [ReferenceImplementation](ReferenceImplementation.md) | [has_training_resource](has_training_resource.md) | range | [DataStandardOrTool](DataStandardOrTool.md) |
| [TrainingProgram](TrainingProgram.md) | [concerns_data_topic](concerns_data_topic.md) | domain | [DataStandardOrTool](DataStandardOrTool.md) |
| [TrainingProgram](TrainingProgram.md) | [has_relevant_organization](has_relevant_organization.md) | domain | [DataStandardOrTool](DataStandardOrTool.md) |
+| [TrainingProgram](TrainingProgram.md) | [has_training_resource](has_training_resource.md) | range | [DataStandardOrTool](DataStandardOrTool.md) |
| [DataStandardOrToolContainer](DataStandardOrToolContainer.md) | [data_standardortools_collection](data_standardortools_collection.md) | range | [DataStandardOrTool](DataStandardOrTool.md) |
+| [UseCase](UseCase.md) | [standards_and_tools_for_dgp_use](standards_and_tools_for_dgp_use.md) | range | [DataStandardOrTool](DataStandardOrTool.md) |
+| [UseCase](UseCase.md) | [alternative_standards_and_tools](alternative_standards_and_tools.md) | range | [DataStandardOrTool](DataStandardOrTool.md) |
@@ -173,7 +236,6 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:DataStandardOrTool](https
-
## Mappings
| Mapping Type | Mapped Value |
@@ -185,6 +247,8 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:DataStandardOrTool](https
+
+
## LinkML Source
@@ -196,12 +260,12 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:DataStandardOrTool](https
name: DataStandardOrTool
description: Represents a standard or tool in the Bridge2AI Standards Registry.
from_schema: https://w3id.org/bridge2ai/standards-schema-all
-rank: 1000
is_a: NamedThing
slots:
- collection
- concerns_data_topic
- has_relevant_organization
+- has_training_resource
- purpose_detail
- is_open
- requires_registration
@@ -220,7 +284,6 @@ slots:
name: DataStandardOrTool
description: Represents a standard or tool in the Bridge2AI Standards Registry.
from_schema: https://w3id.org/bridge2ai/standards-schema-all
-rank: 1000
is_a: NamedThing
attributes:
collection:
@@ -230,12 +293,12 @@ attributes:
rank: 1000
is_a: node_property
domain: NamedThing
- multivalued: true
alias: collection
owner: DataStandardOrTool
domain_of:
- DataStandardOrTool
range: StandardsCollectionTag
+ multivalued: true
concerns_data_topic:
name: concerns_data_topic
description: Subject standard is generally applied in the context of object data
@@ -244,13 +307,13 @@ attributes:
rank: 1000
is_a: related_to
domain: DataStandardOrTool
- multivalued: true
inherited: true
alias: concerns_data_topic
owner: DataStandardOrTool
domain_of:
- DataStandardOrTool
range: DataTopic
+ multivalued: true
has_relevant_organization:
name: has_relevant_organization
description: Subject standard is managed or otherwise guided buy the object organization(s).
@@ -258,13 +321,27 @@ attributes:
rank: 1000
is_a: related_to
domain: DataStandardOrTool
- multivalued: true
inherited: true
alias: has_relevant_organization
owner: DataStandardOrTool
domain_of:
- DataStandardOrTool
range: Organization
+ multivalued: true
+ has_training_resource:
+ name: has_training_resource
+ description: Relevant training resources, standard usage manuals, or other documentation
+ for the standard or tool.
+ from_schema: https://w3id.org/bridge2ai/standards-schema-all
+ rank: 1000
+ is_a: node_property
+ domain: NamedThing
+ alias: has_training_resource
+ owner: DataStandardOrTool
+ domain_of:
+ - DataStandardOrTool
+ range: DataStandardOrTool
+ multivalued: true
purpose_detail:
name: purpose_detail
description: Text description of the standard or tool.
@@ -291,8 +368,8 @@ attributes:
range: boolean
requires_registration:
name: requires_registration
- description: Does usage of the standard or tool require registrion of a user or
- group with some organization or managerial body?
+ description: Does usage of the standard or tool require registration of a user
+ or group with some organization or managerial body?
from_schema: https://w3id.org/bridge2ai/standards-schema-all
rank: 1000
is_a: node_property
@@ -414,20 +491,19 @@ attributes:
rank: 1000
is_a: related_to
domain: NamedThing
- multivalued: true
inherited: true
alias: subclass_of
owner: DataStandardOrTool
domain_of:
- NamedThing
range: NamedThing
+ multivalued: true
related_to:
name: related_to
description: A relationship that is asserted between two named things.
from_schema: https://w3id.org/bridge2ai/standards-schema-all
rank: 1000
domain: NamedThing
- multivalued: true
inherited: true
alias: related_to
owner: DataStandardOrTool
@@ -436,6 +512,7 @@ attributes:
- Organization
symmetric: true
range: NamedThing
+ multivalued: true
contributor_name:
name: contributor_name
description: The name of the person who added this node.
diff --git a/docs/DataStandardOrToolContainer.md b/docs/DataStandardOrToolContainer.md
index fdd8bdc..52b453d 100644
--- a/docs/DataStandardOrToolContainer.md
+++ b/docs/DataStandardOrToolContainer.md
@@ -1,19 +1,33 @@
+
+
# Class: DataStandardOrToolContainer
+
+
_A container for DataStandardOrTool(s)._
+
URI: [https://w3id.org/bridge2ai/standards-schema-all/:DataStandardOrToolContainer](https://w3id.org/bridge2ai/standards-schema-all/:DataStandardOrToolContainer)
+
+
+
```mermaid
classDiagram
class DataStandardOrToolContainer
+ click DataStandardOrToolContainer href "../DataStandardOrToolContainer"
DataStandardOrToolContainer : data_standardortools_collection
- DataStandardOrToolContainer ..> DataStandardOrTool : data_standardortools_collection
+
+
+
+ DataStandardOrToolContainer --> "*" DataStandardOrTool : data_standardortools_collection
+ click DataStandardOrTool href "../DataStandardOrTool"
+
```
@@ -28,7 +42,7 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:DataStandardOrToolContain
| Name | Cardinality and Range | Description | Inheritance |
| --- | --- | --- | --- |
-| [data_standardortools_collection](data_standardortools_collection.md) | 0..*
[DataStandardOrTool](DataStandardOrTool.md) | Collection of associated data standards or tools | direct |
+| [data_standardortools_collection](data_standardortools_collection.md) | *
[DataStandardOrTool](DataStandardOrTool.md) | Collection of associated data standards or tools | direct |
@@ -54,7 +68,6 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:DataStandardOrToolContain
-
## Mappings
| Mapping Type | Mapped Value |
@@ -66,6 +79,8 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:DataStandardOrToolContain
+
+
## LinkML Source
@@ -77,7 +92,6 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:DataStandardOrToolContain
name: DataStandardOrToolContainer
description: A container for DataStandardOrTool(s).
from_schema: https://w3id.org/bridge2ai/standards-schema-all
-rank: 1000
slots:
- data_standardortools_collection
@@ -91,19 +105,18 @@ slots:
name: DataStandardOrToolContainer
description: A container for DataStandardOrTool(s).
from_schema: https://w3id.org/bridge2ai/standards-schema-all
-rank: 1000
attributes:
data_standardortools_collection:
name: data_standardortools_collection
description: Collection of associated data standards or tools
from_schema: https://w3id.org/bridge2ai/standards-schema-all
rank: 1000
- multivalued: true
alias: data_standardortools_collection
owner: DataStandardOrToolContainer
domain_of:
- DataStandardOrToolContainer
range: DataStandardOrTool
+ multivalued: true
inlined: true
inlined_as_list: true
diff --git a/docs/DataSubstrate.md b/docs/DataSubstrate.md
index 1e03bdc..04d68b8 100644
--- a/docs/DataSubstrate.md
+++ b/docs/DataSubstrate.md
@@ -1,17 +1,27 @@
+
+
# Class: DataSubstrate
+
+
_Represents a data substrate for Bridge2AI data. This may be a high-level data structure or a specific implementation of that structure. Interpret as "data, in this form or format", as compared to DataStandard, which refers to the set of rules defining a standard. For example, data in TSV format is represented as a DataSubstrate but the concept of TSV format is a DataStandard._
+
URI: [https://w3id.org/bridge2ai/standards-schema-all/:DataSubstrate](https://w3id.org/bridge2ai/standards-schema-all/:DataSubstrate)
+
+
+
```mermaid
classDiagram
class DataSubstrate
+ click DataSubstrate href "../DataSubstrate"
NamedThing <|-- DataSubstrate
+ click NamedThing href "../NamedThing"
DataSubstrate : category
@@ -43,11 +53,21 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:DataSubstrate](https://w3
DataSubstrate : related_to
- DataSubstrate ..> NamedThing : related_to
+
+
+
+ DataSubstrate --> "*" NamedThing : related_to
+ click NamedThing href "../NamedThing"
+
DataSubstrate : subclass_of
- DataSubstrate ..> NamedThing : subclass_of
+
+
+
+ DataSubstrate --> "*" NamedThing : subclass_of
+ click NamedThing href "../NamedThing"
+
```
@@ -69,15 +89,15 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:DataSubstrate](https://w3
| [edam_id](edam_id.md) | 0..1
[EdamIdentifier](EdamIdentifier.md) | Unique EDAM identifier | direct |
| [mesh_id](mesh_id.md) | 0..1
[MeshIdentifier](MeshIdentifier.md) | Unique MeSH identifier | direct |
| [ncit_id](ncit_id.md) | 0..1
[NcitIdentifier](NcitIdentifier.md) | Unique NCIt Identifier | direct |
-| [metadata_storage](metadata_storage.md) | 0..*
[String](String.md) | Data Substrate in which metadata is stored | direct |
-| [file_extensions](file_extensions.md) | 0..*
[String](String.md) | Commonly used file extensions for this substrate | direct |
-| [limitations](limitations.md) | 0..*
[String](String.md) | Potential obstacles particular to this substrate or implementation | direct |
-| [id](id.md) | 1..1
[Uriorcurie](Uriorcurie.md) | A unique identifier for a thing | [NamedThing](NamedThing.md) |
+| [metadata_storage](metadata_storage.md) | *
[String](String.md) or
[DataSubstrate](DataSubstrate.md) | Data Substrate in which metadata is stored | direct |
+| [file_extensions](file_extensions.md) | *
[String](String.md) | Commonly used file extensions for this substrate | direct |
+| [limitations](limitations.md) | *
[String](String.md) | Potential obstacles particular to this substrate or implementation | direct |
+| [id](id.md) | 1
[Uriorcurie](Uriorcurie.md) | A unique identifier for a thing | [NamedThing](NamedThing.md) |
| [category](category.md) | 0..1
[CategoryType](CategoryType.md) | Name of the high level ontology class in which this entity is categorized | [NamedThing](NamedThing.md) |
| [name](name.md) | 0..1
[String](String.md) | A human-readable name for a thing | [NamedThing](NamedThing.md) |
| [description](description.md) | 0..1
[String](String.md) | A human-readable description for a thing | [NamedThing](NamedThing.md) |
-| [subclass_of](subclass_of.md) | 0..*
[NamedThing](NamedThing.md) | Holds between two classes where the domain class is a specialization of the r... | [NamedThing](NamedThing.md) |
-| [related_to](related_to.md) | 0..*
[NamedThing](NamedThing.md) | A relationship that is asserted between two named things | [NamedThing](NamedThing.md) |
+| [subclass_of](subclass_of.md) | *
[NamedThing](NamedThing.md) | Holds between two classes where the domain class is a specialization of the r... | [NamedThing](NamedThing.md) |
+| [related_to](related_to.md) | *
[NamedThing](NamedThing.md) | A relationship that is asserted between two named things | [NamedThing](NamedThing.md) |
| [contributor_name](contributor_name.md) | 0..1
[String](String.md) | The name of the person who added this node | [NamedThing](NamedThing.md) |
| [contributor_github_name](contributor_github_name.md) | 0..1
[String](String.md) | The name of the github user who added this node | [NamedThing](NamedThing.md) |
| [contributor_orcid](contributor_orcid.md) | 0..1
[Uriorcurie](Uriorcurie.md) | The ORCiD of the person who added this node | [NamedThing](NamedThing.md) |
@@ -91,8 +111,9 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:DataSubstrate](https://w3
| used by | used in | type | used |
| --- | --- | --- | --- |
-| [UseCase](UseCase.md) | [data_substrates](data_substrates.md) | range | [DataSubstrate](DataSubstrate.md) |
+| [DataSubstrate](DataSubstrate.md) | [metadata_storage](metadata_storage.md) | any_of[range] | [DataSubstrate](DataSubstrate.md) |
| [DataSubstrateContainer](DataSubstrateContainer.md) | [data_substrates_collection](data_substrates_collection.md) | range | [DataSubstrate](DataSubstrate.md) |
+| [UseCase](UseCase.md) | [data_substrates](data_substrates.md) | range | [DataSubstrate](DataSubstrate.md) |
@@ -115,7 +136,6 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:DataSubstrate](https://w3
-
## Mappings
| Mapping Type | Mapped Value |
@@ -127,6 +147,8 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:DataSubstrate](https://w3
+
+
## LinkML Source
@@ -142,7 +164,6 @@ description: Represents a data substrate for Bridge2AI data. This may be a high-
rules defining a standard. For example, data in TSV format is represented as a DataSubstrate
but the concept of TSV format is a DataStandard.
from_schema: https://w3id.org/bridge2ai/standards-schema-all
-rank: 1000
is_a: NamedThing
slots:
- edam_id
@@ -166,7 +187,6 @@ description: Represents a data substrate for Bridge2AI data. This may be a high-
rules defining a standard. For example, data in TSV format is represented as a DataSubstrate
but the concept of TSV format is a DataStandard.
from_schema: https://w3id.org/bridge2ai/standards-schema-all
-rank: 1000
is_a: NamedThing
attributes:
edam_id:
@@ -184,8 +204,8 @@ attributes:
alias: edam_id
owner: DataSubstrate
domain_of:
- - DataTopic
- DataSubstrate
+ - DataTopic
range: edam_identifier
mesh_id:
name: mesh_id
@@ -199,8 +219,8 @@ attributes:
alias: mesh_id
owner: DataSubstrate
domain_of:
- - DataTopic
- DataSubstrate
+ - DataTopic
range: mesh_identifier
ncit_id:
name: ncit_id
@@ -214,8 +234,8 @@ attributes:
alias: ncit_id
owner: DataSubstrate
domain_of:
- - DataTopic
- DataSubstrate
+ - DataTopic
range: ncit_identifier
metadata_storage:
name: metadata_storage
@@ -224,12 +244,12 @@ attributes:
rank: 1000
is_a: node_property
domain: NamedThing
- multivalued: true
alias: metadata_storage
owner: DataSubstrate
domain_of:
- DataSubstrate
range: string
+ multivalued: true
any_of:
- range: DataSubstrate
- equals_string: file headers
@@ -240,12 +260,12 @@ attributes:
rank: 1000
is_a: node_property
domain: NamedThing
- multivalued: true
alias: file_extensions
owner: DataSubstrate
domain_of:
- DataSubstrate
range: string
+ multivalued: true
limitations:
name: limitations
description: 'Potential obstacles particular to this substrate or implementation. '
@@ -253,12 +273,12 @@ attributes:
rank: 1000
is_a: node_property
domain: NamedThing
- multivalued: true
alias: limitations
owner: DataSubstrate
domain_of:
- DataSubstrate
range: string
+ multivalued: true
id:
name: id
description: A unique identifier for a thing.
@@ -321,20 +341,19 @@ attributes:
rank: 1000
is_a: related_to
domain: NamedThing
- multivalued: true
inherited: true
alias: subclass_of
owner: DataSubstrate
domain_of:
- NamedThing
range: NamedThing
+ multivalued: true
related_to:
name: related_to
description: A relationship that is asserted between two named things.
from_schema: https://w3id.org/bridge2ai/standards-schema-all
rank: 1000
domain: NamedThing
- multivalued: true
inherited: true
alias: related_to
owner: DataSubstrate
@@ -343,6 +362,7 @@ attributes:
- Organization
symmetric: true
range: NamedThing
+ multivalued: true
contributor_name:
name: contributor_name
description: The name of the person who added this node.
diff --git a/docs/DataSubstrateContainer.md b/docs/DataSubstrateContainer.md
index 8289714..bcec386 100644
--- a/docs/DataSubstrateContainer.md
+++ b/docs/DataSubstrateContainer.md
@@ -1,19 +1,33 @@
+
+
# Class: DataSubstrateContainer
+
+
_A container for DataSubstrates._
+
URI: [https://w3id.org/bridge2ai/standards-schema-all/:DataSubstrateContainer](https://w3id.org/bridge2ai/standards-schema-all/:DataSubstrateContainer)
+
+
+
```mermaid
classDiagram
class DataSubstrateContainer
+ click DataSubstrateContainer href "../DataSubstrateContainer"
DataSubstrateContainer : data_substrates_collection
- DataSubstrateContainer ..> DataSubstrate : data_substrates_collection
+
+
+
+ DataSubstrateContainer --> "*" DataSubstrate : data_substrates_collection
+ click DataSubstrate href "../DataSubstrate"
+
```
@@ -28,7 +42,7 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:DataSubstrateContainer](h
| Name | Cardinality and Range | Description | Inheritance |
| --- | --- | --- | --- |
-| [data_substrates_collection](data_substrates_collection.md) | 0..*
[DataSubstrate](DataSubstrate.md) | Collection of associated data substrates | direct |
+| [data_substrates_collection](data_substrates_collection.md) | *
[DataSubstrate](DataSubstrate.md) | Collection of associated data substrates | direct |
@@ -54,7 +68,6 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:DataSubstrateContainer](h
-
## Mappings
| Mapping Type | Mapped Value |
@@ -66,6 +79,8 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:DataSubstrateContainer](h
+
+
## LinkML Source
@@ -77,7 +92,6 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:DataSubstrateContainer](h
name: DataSubstrateContainer
description: A container for DataSubstrates.
from_schema: https://w3id.org/bridge2ai/standards-schema-all
-rank: 1000
slots:
- data_substrates_collection
@@ -91,19 +105,18 @@ slots:
name: DataSubstrateContainer
description: A container for DataSubstrates.
from_schema: https://w3id.org/bridge2ai/standards-schema-all
-rank: 1000
attributes:
data_substrates_collection:
name: data_substrates_collection
description: Collection of associated data substrates
from_schema: https://w3id.org/bridge2ai/standards-schema-all
rank: 1000
- multivalued: true
alias: data_substrates_collection
owner: DataSubstrateContainer
domain_of:
- DataSubstrateContainer
range: DataSubstrate
+ multivalued: true
inlined: true
inlined_as_list: true
diff --git a/docs/DataTopic.md b/docs/DataTopic.md
index a6bdb12..e3abbdb 100644
--- a/docs/DataTopic.md
+++ b/docs/DataTopic.md
@@ -1,17 +1,27 @@
+
+
# Class: DataTopic
+
+
_Represents a general data topic for Bridge2AI data or the tools/standards applied to the data._
+
URI: [https://w3id.org/bridge2ai/standards-schema-all/:DataTopic](https://w3id.org/bridge2ai/standards-schema-all/:DataTopic)
+
+
+
```mermaid
classDiagram
class DataTopic
+ click DataTopic href "../DataTopic"
NamedThing <|-- DataTopic
+ click NamedThing href "../NamedThing"
DataTopic : category
@@ -37,15 +47,30 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:DataTopic](https://w3id.o
DataTopic : related_to
- DataTopic ..> NamedThing : related_to
+
+
+
+ DataTopic --> "*" NamedThing : related_to
+ click NamedThing href "../NamedThing"
+
DataTopic : subclass_of
- DataTopic ..> NamedThing : subclass_of
+
+
+
+ DataTopic --> "*" NamedThing : subclass_of
+ click NamedThing href "../NamedThing"
+
DataTopic : topic_involves_anatomy
- DataTopic ..> AnatomicalEntity : topic_involves_anatomy
+
+
+
+ DataTopic --> "*" AnatomicalEntity : topic_involves_anatomy
+ click AnatomicalEntity href "../AnatomicalEntity"
+
```
@@ -67,13 +92,13 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:DataTopic](https://w3id.o
| [edam_id](edam_id.md) | 0..1
[EdamIdentifier](EdamIdentifier.md) | Unique EDAM identifier | direct |
| [mesh_id](mesh_id.md) | 0..1
[MeshIdentifier](MeshIdentifier.md) | Unique MeSH identifier | direct |
| [ncit_id](ncit_id.md) | 0..1
[NcitIdentifier](NcitIdentifier.md) | Unique NCIt Identifier | direct |
-| [topic_involves_anatomy](topic_involves_anatomy.md) | 0..*
[AnatomicalEntity](AnatomicalEntity.md) | A relationship between a DataTopic and an anatomical entity | direct |
-| [id](id.md) | 1..1
[Uriorcurie](Uriorcurie.md) | A unique identifier for a thing | [NamedThing](NamedThing.md) |
+| [topic_involves_anatomy](topic_involves_anatomy.md) | *
[AnatomicalEntity](AnatomicalEntity.md) | A relationship between a DataTopic and an anatomical entity | direct |
+| [id](id.md) | 1
[Uriorcurie](Uriorcurie.md) | A unique identifier for a thing | [NamedThing](NamedThing.md) |
| [category](category.md) | 0..1
[CategoryType](CategoryType.md) | Name of the high level ontology class in which this entity is categorized | [NamedThing](NamedThing.md) |
| [name](name.md) | 0..1
[String](String.md) | A human-readable name for a thing | [NamedThing](NamedThing.md) |
| [description](description.md) | 0..1
[String](String.md) | A human-readable description for a thing | [NamedThing](NamedThing.md) |
-| [subclass_of](subclass_of.md) | 0..*
[NamedThing](NamedThing.md) | Holds between two classes where the domain class is a specialization of the r... | [NamedThing](NamedThing.md) |
-| [related_to](related_to.md) | 0..*
[NamedThing](NamedThing.md) | A relationship that is asserted between two named things | [NamedThing](NamedThing.md) |
+| [subclass_of](subclass_of.md) | *
[NamedThing](NamedThing.md) | Holds between two classes where the domain class is a specialization of the r... | [NamedThing](NamedThing.md) |
+| [related_to](related_to.md) | *
[NamedThing](NamedThing.md) | A relationship that is asserted between two named things | [NamedThing](NamedThing.md) |
| [contributor_name](contributor_name.md) | 0..1
[String](String.md) | The name of the person who added this node | [NamedThing](NamedThing.md) |
| [contributor_github_name](contributor_github_name.md) | 0..1
[String](String.md) | The name of the github user who added this node | [NamedThing](NamedThing.md) |
| [contributor_orcid](contributor_orcid.md) | 0..1
[Uriorcurie](Uriorcurie.md) | The ORCiD of the person who added this node | [NamedThing](NamedThing.md) |
@@ -87,7 +112,6 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:DataTopic](https://w3id.o
| used by | used in | type | used |
| --- | --- | --- | --- |
-| [UseCase](UseCase.md) | [data_topics](data_topics.md) | range | [DataTopic](DataTopic.md) |
| [DataStandardOrTool](DataStandardOrTool.md) | [concerns_data_topic](concerns_data_topic.md) | range | [DataTopic](DataTopic.md) |
| [DataStandard](DataStandard.md) | [concerns_data_topic](concerns_data_topic.md) | range | [DataTopic](DataTopic.md) |
| [BiomedicalStandard](BiomedicalStandard.md) | [concerns_data_topic](concerns_data_topic.md) | range | [DataTopic](DataTopic.md) |
@@ -100,6 +124,7 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:DataTopic](https://w3id.o
| [TrainingProgram](TrainingProgram.md) | [concerns_data_topic](concerns_data_topic.md) | range | [DataTopic](DataTopic.md) |
| [DataTopic](DataTopic.md) | [topic_involves_anatomy](topic_involves_anatomy.md) | domain | [DataTopic](DataTopic.md) |
| [DataTopicContainer](DataTopicContainer.md) | [data_topics_collection](data_topics_collection.md) | range | [DataTopic](DataTopic.md) |
+| [UseCase](UseCase.md) | [data_topics](data_topics.md) | range | [DataTopic](DataTopic.md) |
@@ -122,7 +147,6 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:DataTopic](https://w3id.o
-
## Mappings
| Mapping Type | Mapped Value |
@@ -134,6 +158,8 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:DataTopic](https://w3id.o
+
+
## LinkML Source
@@ -146,7 +172,6 @@ name: DataTopic
description: Represents a general data topic for Bridge2AI data or the tools/standards
applied to the data.
from_schema: https://w3id.org/bridge2ai/standards-schema-all
-rank: 1000
is_a: NamedThing
slots:
- edam_id
@@ -165,7 +190,6 @@ name: DataTopic
description: Represents a general data topic for Bridge2AI data or the tools/standards
applied to the data.
from_schema: https://w3id.org/bridge2ai/standards-schema-all
-rank: 1000
is_a: NamedThing
attributes:
edam_id:
@@ -183,8 +207,8 @@ attributes:
alias: edam_id
owner: DataTopic
domain_of:
- - DataTopic
- DataSubstrate
+ - DataTopic
range: edam_identifier
mesh_id:
name: mesh_id
@@ -198,8 +222,8 @@ attributes:
alias: mesh_id
owner: DataTopic
domain_of:
- - DataTopic
- DataSubstrate
+ - DataTopic
range: mesh_identifier
ncit_id:
name: ncit_id
@@ -213,8 +237,8 @@ attributes:
alias: ncit_id
owner: DataTopic
domain_of:
- - DataTopic
- DataSubstrate
+ - DataTopic
range: ncit_identifier
topic_involves_anatomy:
name: topic_involves_anatomy
@@ -225,13 +249,13 @@ attributes:
rank: 1000
is_a: related_to
domain: DataTopic
- multivalued: true
inherited: true
alias: topic_involves_anatomy
owner: DataTopic
domain_of:
- DataTopic
range: AnatomicalEntity
+ multivalued: true
id:
name: id
description: A unique identifier for a thing.
@@ -294,20 +318,19 @@ attributes:
rank: 1000
is_a: related_to
domain: NamedThing
- multivalued: true
inherited: true
alias: subclass_of
owner: DataTopic
domain_of:
- NamedThing
range: NamedThing
+ multivalued: true
related_to:
name: related_to
description: A relationship that is asserted between two named things.
from_schema: https://w3id.org/bridge2ai/standards-schema-all
rank: 1000
domain: NamedThing
- multivalued: true
inherited: true
alias: related_to
owner: DataTopic
@@ -316,6 +339,7 @@ attributes:
- Organization
symmetric: true
range: NamedThing
+ multivalued: true
contributor_name:
name: contributor_name
description: The name of the person who added this node.
diff --git a/docs/DataTopicContainer.md b/docs/DataTopicContainer.md
index c674ec6..f555720 100644
--- a/docs/DataTopicContainer.md
+++ b/docs/DataTopicContainer.md
@@ -1,19 +1,33 @@
+
+
# Class: DataTopicContainer
+
+
_A container for DataTopics._
+
URI: [https://w3id.org/bridge2ai/standards-schema-all/:DataTopicContainer](https://w3id.org/bridge2ai/standards-schema-all/:DataTopicContainer)
+
+
+
```mermaid
classDiagram
class DataTopicContainer
+ click DataTopicContainer href "../DataTopicContainer"
DataTopicContainer : data_topics_collection
- DataTopicContainer ..> DataTopic : data_topics_collection
+
+
+
+ DataTopicContainer --> "*" DataTopic : data_topics_collection
+ click DataTopic href "../DataTopic"
+
```
@@ -28,7 +42,7 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:DataTopicContainer](https
| Name | Cardinality and Range | Description | Inheritance |
| --- | --- | --- | --- |
-| [data_topics_collection](data_topics_collection.md) | 0..*
[DataTopic](DataTopic.md) | Collection of associated data topics | direct |
+| [data_topics_collection](data_topics_collection.md) | *
[DataTopic](DataTopic.md) | Collection of associated data topics | direct |
@@ -54,7 +68,6 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:DataTopicContainer](https
-
## Mappings
| Mapping Type | Mapped Value |
@@ -66,6 +79,8 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:DataTopicContainer](https
+
+
## LinkML Source
@@ -77,7 +92,6 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:DataTopicContainer](https
name: DataTopicContainer
description: A container for DataTopics.
from_schema: https://w3id.org/bridge2ai/standards-schema-all
-rank: 1000
slots:
- data_topics_collection
@@ -91,19 +105,18 @@ slots:
name: DataTopicContainer
description: A container for DataTopics.
from_schema: https://w3id.org/bridge2ai/standards-schema-all
-rank: 1000
attributes:
data_topics_collection:
name: data_topics_collection
description: Collection of associated data topics.
from_schema: https://w3id.org/bridge2ai/standards-schema-all
rank: 1000
- multivalued: true
alias: data_topics_collection
owner: DataTopicContainer
domain_of:
- DataTopicContainer
range: DataTopic
+ multivalued: true
inlined: true
inlined_as_list: true
diff --git a/docs/Date.md b/docs/Date.md
index 6b973ee..6750e27 100644
--- a/docs/Date.md
+++ b/docs/Date.md
@@ -1,9 +1,12 @@
# Type: Date
+
+
_a date (year, month and day) in an idealized calendar_
+
URI: [xsd:date](http://www.w3.org/2001/XMLSchema#date)
* [base](https://w3id.org/linkml/base): XSDDate
@@ -34,3 +37,14 @@ URI: [xsd:date](http://www.w3.org/2001/XMLSchema#date)
+
+## Mappings
+
+| Mapping Type | Mapped Value |
+| --- | --- |
+| self | xsd:date |
+| native | https://w3id.org/bridge2ai/standards-schema-all/:date |
+| exact | schema:Date |
+
+
+
diff --git a/docs/DateOrDatetime.md b/docs/DateOrDatetime.md
index 32eee19..eddb6f2 100644
--- a/docs/DateOrDatetime.md
+++ b/docs/DateOrDatetime.md
@@ -1,9 +1,12 @@
# Type: DateOrDatetime
+
+
_Either a date or a datetime_
+
URI: [linkml:DateOrDatetime](https://w3id.org/linkml/DateOrDatetime)
* [base](https://w3id.org/linkml/base): str
@@ -34,3 +37,13 @@ URI: [linkml:DateOrDatetime](https://w3id.org/linkml/DateOrDatetime)
+
+## Mappings
+
+| Mapping Type | Mapped Value |
+| --- | --- |
+| self | linkml:DateOrDatetime |
+| native | https://w3id.org/bridge2ai/standards-schema-all/:date_or_datetime |
+
+
+
diff --git a/docs/Datetime.md b/docs/Datetime.md
index b7c0f92..ade5ef6 100644
--- a/docs/Datetime.md
+++ b/docs/Datetime.md
@@ -1,9 +1,12 @@
# Type: Datetime
+
+
_The combination of a date and time_
+
URI: [xsd:dateTime](http://www.w3.org/2001/XMLSchema#dateTime)
* [base](https://w3id.org/linkml/base): XSDDateTime
@@ -34,3 +37,14 @@ URI: [xsd:dateTime](http://www.w3.org/2001/XMLSchema#dateTime)
+
+## Mappings
+
+| Mapping Type | Mapped Value |
+| --- | --- |
+| self | xsd:dateTime |
+| native | https://w3id.org/bridge2ai/standards-schema-all/:datetime |
+| exact | schema:DateTime |
+
+
+
diff --git a/docs/Decimal.md b/docs/Decimal.md
index f401042..404ce61 100644
--- a/docs/Decimal.md
+++ b/docs/Decimal.md
@@ -1,9 +1,12 @@
# Type: Decimal
+
+
_A real number with arbitrary precision that conforms to the xsd:decimal specification_
+
URI: [xsd:decimal](http://www.w3.org/2001/XMLSchema#decimal)
* [base](https://w3id.org/linkml/base): Decimal
@@ -33,3 +36,14 @@ URI: [xsd:decimal](http://www.w3.org/2001/XMLSchema#decimal)
+
+## Mappings
+
+| Mapping Type | Mapped Value |
+| --- | --- |
+| self | xsd:decimal |
+| native | https://w3id.org/bridge2ai/standards-schema-all/:decimal |
+| broad | schema:Number |
+
+
+
diff --git a/docs/Double.md b/docs/Double.md
index 45bf788..93aa524 100644
--- a/docs/Double.md
+++ b/docs/Double.md
@@ -1,9 +1,12 @@
# Type: Double
+
+
_A real number that conforms to the xsd:double specification_
+
URI: [xsd:double](http://www.w3.org/2001/XMLSchema#double)
* [base](https://w3id.org/linkml/base): float
@@ -33,3 +36,14 @@ URI: [xsd:double](http://www.w3.org/2001/XMLSchema#double)
+
+## Mappings
+
+| Mapping Type | Mapped Value |
+| --- | --- |
+| self | xsd:double |
+| native | https://w3id.org/bridge2ai/standards-schema-all/:double |
+| close | schema:Float |
+
+
+
diff --git a/docs/EdamIdentifier.md b/docs/EdamIdentifier.md
index fef536e..2167324 100644
--- a/docs/EdamIdentifier.md
+++ b/docs/EdamIdentifier.md
@@ -1,9 +1,12 @@
# Type: EdamIdentifier
+
+
_Identifier from EDAM ontology_
+
URI: [xsd:anyURI](http://www.w3.org/2001/XMLSchema#anyURI)
* [base](https://w3id.org/linkml/base): URIorCURIE
@@ -49,3 +52,13 @@ Instances of this class *should* have identifiers with one of the following pref
+
+## Mappings
+
+| Mapping Type | Mapped Value |
+| --- | --- |
+| self | https://w3id.org/bridge2ai/standards-schema-all/:edam_identifier |
+| native | https://w3id.org/bridge2ai/standards-schema-all/:edam_identifier |
+
+
+
diff --git a/docs/Float.md b/docs/Float.md
index 55f0935..51ac694 100644
--- a/docs/Float.md
+++ b/docs/Float.md
@@ -1,9 +1,12 @@
# Type: Float
+
+
_A real number that conforms to the xsd:float specification_
+
URI: [xsd:float](http://www.w3.org/2001/XMLSchema#float)
* [base](https://w3id.org/linkml/base): float
@@ -33,3 +36,14 @@ URI: [xsd:float](http://www.w3.org/2001/XMLSchema#float)
+
+## Mappings
+
+| Mapping Type | Mapped Value |
+| --- | --- |
+| self | xsd:float |
+| native | https://w3id.org/bridge2ai/standards-schema-all/:float |
+| exact | schema:Float |
+
+
+
diff --git a/docs/Integer.md b/docs/Integer.md
index 8b09a80..76d055b 100644
--- a/docs/Integer.md
+++ b/docs/Integer.md
@@ -1,9 +1,12 @@
# Type: Integer
+
+
_An integer_
+
URI: [xsd:integer](http://www.w3.org/2001/XMLSchema#integer)
* [base](https://w3id.org/linkml/base): int
@@ -33,3 +36,14 @@ URI: [xsd:integer](http://www.w3.org/2001/XMLSchema#integer)
+
+## Mappings
+
+| Mapping Type | Mapped Value |
+| --- | --- |
+| self | xsd:integer |
+| native | https://w3id.org/bridge2ai/standards-schema-all/:integer |
+| exact | schema:Integer |
+
+
+
diff --git a/docs/Jsonpath.md b/docs/Jsonpath.md
new file mode 100644
index 0000000..bebfdab
--- /dev/null
+++ b/docs/Jsonpath.md
@@ -0,0 +1,49 @@
+# Type: Jsonpath
+
+
+
+
+_A string encoding a JSON Path. The value of the string MUST conform to JSON Point syntax and SHOULD dereference to zero or more valid objects within the current instance document when encoded in tree form._
+
+
+
+URI: [xsd:string](http://www.w3.org/2001/XMLSchema#string)
+
+* [base](https://w3id.org/linkml/base): str
+
+* [uri](https://w3id.org/linkml/uri): xsd:string
+
+* [repr](https://w3id.org/linkml/repr): str
+
+
+
+
+
+
+
+
+## Identifier and Mapping Information
+
+
+
+
+
+
+
+### Schema Source
+
+
+* from schema: https://w3id.org/bridge2ai/standards-schema-all
+
+
+
+
+## Mappings
+
+| Mapping Type | Mapped Value |
+| --- | --- |
+| self | xsd:string |
+| native | https://w3id.org/bridge2ai/standards-schema-all/:jsonpath |
+
+
+
diff --git a/docs/Jsonpointer.md b/docs/Jsonpointer.md
new file mode 100644
index 0000000..8b127f6
--- /dev/null
+++ b/docs/Jsonpointer.md
@@ -0,0 +1,49 @@
+# Type: Jsonpointer
+
+
+
+
+_A string encoding a JSON Pointer. The value of the string MUST conform to JSON Point syntax and SHOULD dereference to a valid object within the current instance document when encoded in tree form._
+
+
+
+URI: [xsd:string](http://www.w3.org/2001/XMLSchema#string)
+
+* [base](https://w3id.org/linkml/base): str
+
+* [uri](https://w3id.org/linkml/uri): xsd:string
+
+* [repr](https://w3id.org/linkml/repr): str
+
+
+
+
+
+
+
+
+## Identifier and Mapping Information
+
+
+
+
+
+
+
+### Schema Source
+
+
+* from schema: https://w3id.org/bridge2ai/standards-schema-all
+
+
+
+
+## Mappings
+
+| Mapping Type | Mapped Value |
+| --- | --- |
+| self | xsd:string |
+| native | https://w3id.org/bridge2ai/standards-schema-all/:jsonpointer |
+
+
+
diff --git a/docs/MeshIdentifier.md b/docs/MeshIdentifier.md
index 9329bf3..ee9107f 100644
--- a/docs/MeshIdentifier.md
+++ b/docs/MeshIdentifier.md
@@ -1,9 +1,12 @@
# Type: MeshIdentifier
+
+
_Identifier from Medical Subject Headings (MeSH) biomedical vocabulary._
+
URI: [xsd:anyURI](http://www.w3.org/2001/XMLSchema#anyURI)
* [base](https://w3id.org/linkml/base): URIorCURIE
@@ -43,3 +46,13 @@ Instances of this class *should* have identifiers with one of the following pref
+
+## Mappings
+
+| Mapping Type | Mapped Value |
+| --- | --- |
+| self | https://w3id.org/bridge2ai/standards-schema-all/:mesh_identifier |
+| native | https://w3id.org/bridge2ai/standards-schema-all/:mesh_identifier |
+
+
+
diff --git a/docs/ModelRepository.md b/docs/ModelRepository.md
index 84579ec..ebea24e 100644
--- a/docs/ModelRepository.md
+++ b/docs/ModelRepository.md
@@ -1,5 +1,10 @@
+
+
# Class: ModelRepository
-_Represents a resource in the Bridge2AI Standards Registry serving to curate and store computational models. To be a respository, the resource must not index models alone._
+
+
+_Represents a resource in the Bridge2AI Standards Registry serving to curate and store computational models. To be a repository, the resource must not index models alone._
+
@@ -8,20 +13,35 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:ModelRepository](https://
+
+
+
```mermaid
classDiagram
class ModelRepository
+ click ModelRepository href "../ModelRepository"
DataStandardOrTool <|-- ModelRepository
+ click DataStandardOrTool href "../DataStandardOrTool"
ModelRepository : category
ModelRepository : collection
- ModelRepository ..> StandardsCollectionTag : collection
+
+
+
+ ModelRepository --> "*" StandardsCollectionTag : collection
+ click StandardsCollectionTag href "../StandardsCollectionTag"
+
ModelRepository : concerns_data_topic
- ModelRepository ..> DataTopic : concerns_data_topic
+
+
+
+ ModelRepository --> "*" DataTopic : concerns_data_topic
+ click DataTopic href "../DataTopic"
+
ModelRepository : contribution_date
@@ -37,7 +57,21 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:ModelRepository](https://
ModelRepository : has_relevant_organization
- ModelRepository ..> Organization : has_relevant_organization
+
+
+
+ ModelRepository --> "*" Organization : has_relevant_organization
+ click Organization href "../Organization"
+
+
+ ModelRepository : has_training_resource
+
+
+
+
+ ModelRepository --> "*" DataStandardOrTool : has_training_resource
+ click DataStandardOrTool href "../DataStandardOrTool"
+
ModelRepository : id
@@ -53,13 +87,23 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:ModelRepository](https://
ModelRepository : related_to
- ModelRepository ..> NamedThing : related_to
+
+
+
+ ModelRepository --> "*" NamedThing : related_to
+ click NamedThing href "../NamedThing"
+
ModelRepository : requires_registration
ModelRepository : subclass_of
- ModelRepository ..> NamedThing : subclass_of
+
+
+
+ ModelRepository --> "*" NamedThing : subclass_of
+ click NamedThing href "../NamedThing"
+
ModelRepository : url
@@ -81,22 +125,23 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:ModelRepository](https://
| Name | Cardinality and Range | Description | Inheritance |
| --- | --- | --- | --- |
-| [collection](collection.md) | 0..*
[StandardsCollectionTag](StandardsCollectionTag.md) | Tags for specific sets of standards | [DataStandardOrTool](DataStandardOrTool.md) |
-| [concerns_data_topic](concerns_data_topic.md) | 0..*
[DataTopic](DataTopic.md) | Subject standard is generally applied in the context of object data topic | [DataStandardOrTool](DataStandardOrTool.md) |
-| [has_relevant_organization](has_relevant_organization.md) | 0..*
[Organization](Organization.md) | Subject standard is managed or otherwise guided buy the object organization(s... | [DataStandardOrTool](DataStandardOrTool.md) |
+| [collection](collection.md) | *
[StandardsCollectionTag](StandardsCollectionTag.md) | Tags for specific sets of standards | [DataStandardOrTool](DataStandardOrTool.md) |
+| [concerns_data_topic](concerns_data_topic.md) | *
[DataTopic](DataTopic.md) | Subject standard is generally applied in the context of object data topic | [DataStandardOrTool](DataStandardOrTool.md) |
+| [has_relevant_organization](has_relevant_organization.md) | *
[Organization](Organization.md) | Subject standard is managed or otherwise guided buy the object organization(s... | [DataStandardOrTool](DataStandardOrTool.md) |
+| [has_training_resource](has_training_resource.md) | *
[DataStandardOrTool](DataStandardOrTool.md) | Relevant training resources, standard usage manuals, or other documentation f... | [DataStandardOrTool](DataStandardOrTool.md) |
| [purpose_detail](purpose_detail.md) | 0..1
[String](String.md) | Text description of the standard or tool | [DataStandardOrTool](DataStandardOrTool.md) |
| [is_open](is_open.md) | 0..1
[Boolean](Boolean.md) | Is the standard or tool FAIR and available free of cost? | [DataStandardOrTool](DataStandardOrTool.md) |
-| [requires_registration](requires_registration.md) | 0..1
[Boolean](Boolean.md) | Does usage of the standard or tool require registrion of a user or group with... | [DataStandardOrTool](DataStandardOrTool.md) |
+| [requires_registration](requires_registration.md) | 0..1
[Boolean](Boolean.md) | Does usage of the standard or tool require registration of a user or group wi... | [DataStandardOrTool](DataStandardOrTool.md) |
| [url](url.md) | 0..1
[Uriorcurie](Uriorcurie.md) | URL for basic documentation of the standard or tool | [DataStandardOrTool](DataStandardOrTool.md) |
| [publication](publication.md) | 0..1
[Uriorcurie](Uriorcurie.md) | Relevant publication for the standard or tool | [DataStandardOrTool](DataStandardOrTool.md) |
| [formal_specification](formal_specification.md) | 0..1
[Uriorcurie](Uriorcurie.md) | Relevant code repository or other location for a formal specification of the ... | [DataStandardOrTool](DataStandardOrTool.md) |
| [not_relevant_to_dgps](not_relevant_to_dgps.md) | 0..1
[Boolean](Boolean.md) | Is the standard or tool currently relevant to DGPs? | [DataStandardOrTool](DataStandardOrTool.md) |
-| [id](id.md) | 1..1
[Uriorcurie](Uriorcurie.md) | A unique identifier for a thing | [NamedThing](NamedThing.md) |
+| [id](id.md) | 1
[Uriorcurie](Uriorcurie.md) | A unique identifier for a thing | [NamedThing](NamedThing.md) |
| [category](category.md) | 0..1
[CategoryType](CategoryType.md) | Name of the high level ontology class in which this entity is categorized | [NamedThing](NamedThing.md) |
| [name](name.md) | 0..1
[String](String.md) | A human-readable name for a thing | [NamedThing](NamedThing.md) |
| [description](description.md) | 0..1
[String](String.md) | A human-readable description for a thing | [NamedThing](NamedThing.md) |
-| [subclass_of](subclass_of.md) | 0..*
[NamedThing](NamedThing.md) | Holds between two classes where the domain class is a specialization of the r... | [NamedThing](NamedThing.md) |
-| [related_to](related_to.md) | 0..*
[NamedThing](NamedThing.md) | A relationship that is asserted between two named things | [NamedThing](NamedThing.md) |
+| [subclass_of](subclass_of.md) | *
[NamedThing](NamedThing.md) | Holds between two classes where the domain class is a specialization of the r... | [NamedThing](NamedThing.md) |
+| [related_to](related_to.md) | *
[NamedThing](NamedThing.md) | A relationship that is asserted between two named things | [NamedThing](NamedThing.md) |
| [contributor_name](contributor_name.md) | 0..1
[String](String.md) | The name of the person who added this node | [NamedThing](NamedThing.md) |
| [contributor_github_name](contributor_github_name.md) | 0..1
[String](String.md) | The name of the github user who added this node | [NamedThing](NamedThing.md) |
| [contributor_orcid](contributor_orcid.md) | 0..1
[Uriorcurie](Uriorcurie.md) | The ORCiD of the person who added this node | [NamedThing](NamedThing.md) |
@@ -126,7 +171,6 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:ModelRepository](https://
-
## Mappings
| Mapping Type | Mapped Value |
@@ -138,6 +182,8 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:ModelRepository](https://
+
+
## LinkML Source
@@ -148,10 +194,9 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:ModelRepository](https://
```yaml
name: ModelRepository
description: Represents a resource in the Bridge2AI Standards Registry serving to
- curate and store computational models. To be a respository, the resource must not
+ curate and store computational models. To be a repository, the resource must not
index models alone.
from_schema: https://w3id.org/bridge2ai/standards-schema-all
-rank: 1000
is_a: DataStandardOrTool
```
@@ -163,10 +208,9 @@ is_a: DataStandardOrTool
```yaml
name: ModelRepository
description: Represents a resource in the Bridge2AI Standards Registry serving to
- curate and store computational models. To be a respository, the resource must not
+ curate and store computational models. To be a repository, the resource must not
index models alone.
from_schema: https://w3id.org/bridge2ai/standards-schema-all
-rank: 1000
is_a: DataStandardOrTool
attributes:
collection:
@@ -176,12 +220,12 @@ attributes:
rank: 1000
is_a: node_property
domain: NamedThing
- multivalued: true
alias: collection
owner: ModelRepository
domain_of:
- DataStandardOrTool
range: StandardsCollectionTag
+ multivalued: true
concerns_data_topic:
name: concerns_data_topic
description: Subject standard is generally applied in the context of object data
@@ -190,13 +234,13 @@ attributes:
rank: 1000
is_a: related_to
domain: DataStandardOrTool
- multivalued: true
inherited: true
alias: concerns_data_topic
owner: ModelRepository
domain_of:
- DataStandardOrTool
range: DataTopic
+ multivalued: true
has_relevant_organization:
name: has_relevant_organization
description: Subject standard is managed or otherwise guided buy the object organization(s).
@@ -204,13 +248,27 @@ attributes:
rank: 1000
is_a: related_to
domain: DataStandardOrTool
- multivalued: true
inherited: true
alias: has_relevant_organization
owner: ModelRepository
domain_of:
- DataStandardOrTool
range: Organization
+ multivalued: true
+ has_training_resource:
+ name: has_training_resource
+ description: Relevant training resources, standard usage manuals, or other documentation
+ for the standard or tool.
+ from_schema: https://w3id.org/bridge2ai/standards-schema-all
+ rank: 1000
+ is_a: node_property
+ domain: NamedThing
+ alias: has_training_resource
+ owner: ModelRepository
+ domain_of:
+ - DataStandardOrTool
+ range: DataStandardOrTool
+ multivalued: true
purpose_detail:
name: purpose_detail
description: Text description of the standard or tool.
@@ -237,8 +295,8 @@ attributes:
range: boolean
requires_registration:
name: requires_registration
- description: Does usage of the standard or tool require registrion of a user or
- group with some organization or managerial body?
+ description: Does usage of the standard or tool require registration of a user
+ or group with some organization or managerial body?
from_schema: https://w3id.org/bridge2ai/standards-schema-all
rank: 1000
is_a: node_property
@@ -360,20 +418,19 @@ attributes:
rank: 1000
is_a: related_to
domain: NamedThing
- multivalued: true
inherited: true
alias: subclass_of
owner: ModelRepository
domain_of:
- NamedThing
range: NamedThing
+ multivalued: true
related_to:
name: related_to
description: A relationship that is asserted between two named things.
from_schema: https://w3id.org/bridge2ai/standards-schema-all
rank: 1000
domain: NamedThing
- multivalued: true
inherited: true
alias: related_to
owner: ModelRepository
@@ -382,6 +439,7 @@ attributes:
- Organization
symmetric: true
range: NamedThing
+ multivalued: true
contributor_name:
name: contributor_name
description: The name of the person who added this node.
diff --git a/docs/NamedThing.md b/docs/NamedThing.md
index efabe57..8c13b8e 100644
--- a/docs/NamedThing.md
+++ b/docs/NamedThing.md
@@ -1,22 +1,37 @@
+
+
# Class: NamedThing
+
+
_A generic grouping for any identifiable entity_
+
URI: [schema:Thing](http://schema.org/Thing)
+
+
+
```mermaid
classDiagram
class NamedThing
- NamedThing <|-- UseCase
+ click NamedThing href "../NamedThing"
+ NamedThing <|-- AnatomicalEntity
+ click AnatomicalEntity href "../AnatomicalEntity"
NamedThing <|-- DataStandardOrTool
+ click DataStandardOrTool href "../DataStandardOrTool"
+ NamedThing <|-- DataSubstrate
+ click DataSubstrate href "../DataSubstrate"
NamedThing <|-- DataTopic
- NamedThing <|-- AnatomicalEntity
+ click DataTopic href "../DataTopic"
NamedThing <|-- Organization
- NamedThing <|-- DataSubstrate
+ click Organization href "../Organization"
+ NamedThing <|-- UseCase
+ click UseCase href "../UseCase"
NamedThing : category
@@ -36,11 +51,21 @@ URI: [schema:Thing](http://schema.org/Thing)
NamedThing : related_to
- NamedThing ..> NamedThing : related_to
+
+
+
+ NamedThing --> "*" NamedThing : related_to
+ click NamedThing href "../NamedThing"
+
NamedThing : subclass_of
- NamedThing ..> NamedThing : subclass_of
+
+
+
+ NamedThing --> "*" NamedThing : subclass_of
+ click NamedThing href "../NamedThing"
+
```
@@ -51,12 +76,12 @@ URI: [schema:Thing](http://schema.org/Thing)
## Inheritance
* **NamedThing**
- * [UseCase](UseCase.md)
+ * [AnatomicalEntity](AnatomicalEntity.md)
* [DataStandardOrTool](DataStandardOrTool.md)
+ * [DataSubstrate](DataSubstrate.md)
* [DataTopic](DataTopic.md)
- * [AnatomicalEntity](AnatomicalEntity.md)
* [Organization](Organization.md)
- * [DataSubstrate](DataSubstrate.md)
+ * [UseCase](UseCase.md)
@@ -64,12 +89,12 @@ URI: [schema:Thing](http://schema.org/Thing)
| Name | Cardinality and Range | Description | Inheritance |
| --- | --- | --- | --- |
-| [id](id.md) | 1..1
[Uriorcurie](Uriorcurie.md) | A unique identifier for a thing | direct |
+| [id](id.md) | 1
[Uriorcurie](Uriorcurie.md) | A unique identifier for a thing | direct |
| [category](category.md) | 0..1
[CategoryType](CategoryType.md) | Name of the high level ontology class in which this entity is categorized | direct |
| [name](name.md) | 0..1
[String](String.md) | A human-readable name for a thing | direct |
| [description](description.md) | 0..1
[String](String.md) | A human-readable description for a thing | direct |
-| [subclass_of](subclass_of.md) | 0..*
[NamedThing](NamedThing.md) | Holds between two classes where the domain class is a specialization of the r... | direct |
-| [related_to](related_to.md) | 0..*
[NamedThing](NamedThing.md) | A relationship that is asserted between two named things | direct |
+| [subclass_of](subclass_of.md) | *
[NamedThing](NamedThing.md) | Holds between two classes where the domain class is a specialization of the r... | direct |
+| [related_to](related_to.md) | *
[NamedThing](NamedThing.md) | A relationship that is asserted between two named things | direct |
| [contributor_name](contributor_name.md) | 0..1
[String](String.md) | The name of the person who added this node | direct |
| [contributor_github_name](contributor_github_name.md) | 0..1
[String](String.md) | The name of the github user who added this node | direct |
| [contributor_orcid](contributor_orcid.md) | 0..1
[Uriorcurie](Uriorcurie.md) | The ORCiD of the person who added this node | direct |
@@ -83,27 +108,26 @@ URI: [schema:Thing](http://schema.org/Thing)
| used by | used in | type | used |
| --- | --- | --- | --- |
-| [UseCase](UseCase.md) | [use_case_category](use_case_category.md) | domain | [NamedThing](NamedThing.md) |
-| [UseCase](UseCase.md) | [known_limitations](known_limitations.md) | domain | [NamedThing](NamedThing.md) |
-| [UseCase](UseCase.md) | [data_topics](data_topics.md) | domain | [NamedThing](NamedThing.md) |
-| [UseCase](UseCase.md) | [data_substrates](data_substrates.md) | domain | [NamedThing](NamedThing.md) |
-| [UseCase](UseCase.md) | [standards_and_tools_for_dgp_use](standards_and_tools_for_dgp_use.md) | domain | [NamedThing](NamedThing.md) |
-| [UseCase](UseCase.md) | [alternative_standards_and_tools](alternative_standards_and_tools.md) | domain | [NamedThing](NamedThing.md) |
-| [UseCase](UseCase.md) | [enables](enables.md) | domain | [NamedThing](NamedThing.md) |
-| [UseCase](UseCase.md) | [involved_in_experimental_design](involved_in_experimental_design.md) | domain | [NamedThing](NamedThing.md) |
-| [UseCase](UseCase.md) | [involved_in_metadata_management](involved_in_metadata_management.md) | domain | [NamedThing](NamedThing.md) |
-| [UseCase](UseCase.md) | [involved_in_quality_control](involved_in_quality_control.md) | domain | [NamedThing](NamedThing.md) |
-| [UseCase](UseCase.md) | [xref](xref.md) | domain | [NamedThing](NamedThing.md) |
-| [UseCase](UseCase.md) | [category](category.md) | domain | [NamedThing](NamedThing.md) |
-| [UseCase](UseCase.md) | [subclass_of](subclass_of.md) | domain | [NamedThing](NamedThing.md) |
-| [UseCase](UseCase.md) | [subclass_of](subclass_of.md) | range | [NamedThing](NamedThing.md) |
-| [UseCase](UseCase.md) | [related_to](related_to.md) | domain | [NamedThing](NamedThing.md) |
-| [UseCase](UseCase.md) | [related_to](related_to.md) | range | [NamedThing](NamedThing.md) |
-| [UseCase](UseCase.md) | [contributor_name](contributor_name.md) | domain | [NamedThing](NamedThing.md) |
-| [UseCase](UseCase.md) | [contributor_github_name](contributor_github_name.md) | domain | [NamedThing](NamedThing.md) |
-| [UseCase](UseCase.md) | [contributor_orcid](contributor_orcid.md) | domain | [NamedThing](NamedThing.md) |
-| [UseCase](UseCase.md) | [contribution_date](contribution_date.md) | domain | [NamedThing](NamedThing.md) |
+| [NamedThing](NamedThing.md) | [category](category.md) | domain | [NamedThing](NamedThing.md) |
+| [NamedThing](NamedThing.md) | [subclass_of](subclass_of.md) | domain | [NamedThing](NamedThing.md) |
+| [NamedThing](NamedThing.md) | [subclass_of](subclass_of.md) | range | [NamedThing](NamedThing.md) |
+| [NamedThing](NamedThing.md) | [related_to](related_to.md) | domain | [NamedThing](NamedThing.md) |
+| [NamedThing](NamedThing.md) | [related_to](related_to.md) | range | [NamedThing](NamedThing.md) |
+| [NamedThing](NamedThing.md) | [contributor_name](contributor_name.md) | domain | [NamedThing](NamedThing.md) |
+| [NamedThing](NamedThing.md) | [contributor_github_name](contributor_github_name.md) | domain | [NamedThing](NamedThing.md) |
+| [NamedThing](NamedThing.md) | [contributor_orcid](contributor_orcid.md) | domain | [NamedThing](NamedThing.md) |
+| [NamedThing](NamedThing.md) | [contribution_date](contribution_date.md) | domain | [NamedThing](NamedThing.md) |
+| [AnatomicalEntity](AnatomicalEntity.md) | [category](category.md) | domain | [NamedThing](NamedThing.md) |
+| [AnatomicalEntity](AnatomicalEntity.md) | [subclass_of](subclass_of.md) | domain | [NamedThing](NamedThing.md) |
+| [AnatomicalEntity](AnatomicalEntity.md) | [subclass_of](subclass_of.md) | range | [NamedThing](NamedThing.md) |
+| [AnatomicalEntity](AnatomicalEntity.md) | [related_to](related_to.md) | domain | [NamedThing](NamedThing.md) |
+| [AnatomicalEntity](AnatomicalEntity.md) | [related_to](related_to.md) | range | [NamedThing](NamedThing.md) |
+| [AnatomicalEntity](AnatomicalEntity.md) | [contributor_name](contributor_name.md) | domain | [NamedThing](NamedThing.md) |
+| [AnatomicalEntity](AnatomicalEntity.md) | [contributor_github_name](contributor_github_name.md) | domain | [NamedThing](NamedThing.md) |
+| [AnatomicalEntity](AnatomicalEntity.md) | [contributor_orcid](contributor_orcid.md) | domain | [NamedThing](NamedThing.md) |
+| [AnatomicalEntity](AnatomicalEntity.md) | [contribution_date](contribution_date.md) | domain | [NamedThing](NamedThing.md) |
| [DataStandardOrTool](DataStandardOrTool.md) | [collection](collection.md) | domain | [NamedThing](NamedThing.md) |
+| [DataStandardOrTool](DataStandardOrTool.md) | [has_training_resource](has_training_resource.md) | domain | [NamedThing](NamedThing.md) |
| [DataStandardOrTool](DataStandardOrTool.md) | [purpose_detail](purpose_detail.md) | domain | [NamedThing](NamedThing.md) |
| [DataStandardOrTool](DataStandardOrTool.md) | [is_open](is_open.md) | domain | [NamedThing](NamedThing.md) |
| [DataStandardOrTool](DataStandardOrTool.md) | [requires_registration](requires_registration.md) | domain | [NamedThing](NamedThing.md) |
@@ -121,6 +145,7 @@ URI: [schema:Thing](http://schema.org/Thing)
| [DataStandardOrTool](DataStandardOrTool.md) | [contributor_orcid](contributor_orcid.md) | domain | [NamedThing](NamedThing.md) |
| [DataStandardOrTool](DataStandardOrTool.md) | [contribution_date](contribution_date.md) | domain | [NamedThing](NamedThing.md) |
| [DataStandard](DataStandard.md) | [collection](collection.md) | domain | [NamedThing](NamedThing.md) |
+| [DataStandard](DataStandard.md) | [has_training_resource](has_training_resource.md) | domain | [NamedThing](NamedThing.md) |
| [DataStandard](DataStandard.md) | [purpose_detail](purpose_detail.md) | domain | [NamedThing](NamedThing.md) |
| [DataStandard](DataStandard.md) | [is_open](is_open.md) | domain | [NamedThing](NamedThing.md) |
| [DataStandard](DataStandard.md) | [requires_registration](requires_registration.md) | domain | [NamedThing](NamedThing.md) |
@@ -138,6 +163,7 @@ URI: [schema:Thing](http://schema.org/Thing)
| [DataStandard](DataStandard.md) | [contributor_orcid](contributor_orcid.md) | domain | [NamedThing](NamedThing.md) |
| [DataStandard](DataStandard.md) | [contribution_date](contribution_date.md) | domain | [NamedThing](NamedThing.md) |
| [BiomedicalStandard](BiomedicalStandard.md) | [collection](collection.md) | domain | [NamedThing](NamedThing.md) |
+| [BiomedicalStandard](BiomedicalStandard.md) | [has_training_resource](has_training_resource.md) | domain | [NamedThing](NamedThing.md) |
| [BiomedicalStandard](BiomedicalStandard.md) | [purpose_detail](purpose_detail.md) | domain | [NamedThing](NamedThing.md) |
| [BiomedicalStandard](BiomedicalStandard.md) | [is_open](is_open.md) | domain | [NamedThing](NamedThing.md) |
| [BiomedicalStandard](BiomedicalStandard.md) | [requires_registration](requires_registration.md) | domain | [NamedThing](NamedThing.md) |
@@ -155,6 +181,7 @@ URI: [schema:Thing](http://schema.org/Thing)
| [BiomedicalStandard](BiomedicalStandard.md) | [contributor_orcid](contributor_orcid.md) | domain | [NamedThing](NamedThing.md) |
| [BiomedicalStandard](BiomedicalStandard.md) | [contribution_date](contribution_date.md) | domain | [NamedThing](NamedThing.md) |
| [Registry](Registry.md) | [collection](collection.md) | domain | [NamedThing](NamedThing.md) |
+| [Registry](Registry.md) | [has_training_resource](has_training_resource.md) | domain | [NamedThing](NamedThing.md) |
| [Registry](Registry.md) | [purpose_detail](purpose_detail.md) | domain | [NamedThing](NamedThing.md) |
| [Registry](Registry.md) | [is_open](is_open.md) | domain | [NamedThing](NamedThing.md) |
| [Registry](Registry.md) | [requires_registration](requires_registration.md) | domain | [NamedThing](NamedThing.md) |
@@ -172,6 +199,7 @@ URI: [schema:Thing](http://schema.org/Thing)
| [Registry](Registry.md) | [contributor_orcid](contributor_orcid.md) | domain | [NamedThing](NamedThing.md) |
| [Registry](Registry.md) | [contribution_date](contribution_date.md) | domain | [NamedThing](NamedThing.md) |
| [OntologyOrVocabulary](OntologyOrVocabulary.md) | [collection](collection.md) | domain | [NamedThing](NamedThing.md) |
+| [OntologyOrVocabulary](OntologyOrVocabulary.md) | [has_training_resource](has_training_resource.md) | domain | [NamedThing](NamedThing.md) |
| [OntologyOrVocabulary](OntologyOrVocabulary.md) | [purpose_detail](purpose_detail.md) | domain | [NamedThing](NamedThing.md) |
| [OntologyOrVocabulary](OntologyOrVocabulary.md) | [is_open](is_open.md) | domain | [NamedThing](NamedThing.md) |
| [OntologyOrVocabulary](OntologyOrVocabulary.md) | [requires_registration](requires_registration.md) | domain | [NamedThing](NamedThing.md) |
@@ -189,6 +217,7 @@ URI: [schema:Thing](http://schema.org/Thing)
| [OntologyOrVocabulary](OntologyOrVocabulary.md) | [contributor_orcid](contributor_orcid.md) | domain | [NamedThing](NamedThing.md) |
| [OntologyOrVocabulary](OntologyOrVocabulary.md) | [contribution_date](contribution_date.md) | domain | [NamedThing](NamedThing.md) |
| [ModelRepository](ModelRepository.md) | [collection](collection.md) | domain | [NamedThing](NamedThing.md) |
+| [ModelRepository](ModelRepository.md) | [has_training_resource](has_training_resource.md) | domain | [NamedThing](NamedThing.md) |
| [ModelRepository](ModelRepository.md) | [purpose_detail](purpose_detail.md) | domain | [NamedThing](NamedThing.md) |
| [ModelRepository](ModelRepository.md) | [is_open](is_open.md) | domain | [NamedThing](NamedThing.md) |
| [ModelRepository](ModelRepository.md) | [requires_registration](requires_registration.md) | domain | [NamedThing](NamedThing.md) |
@@ -206,6 +235,7 @@ URI: [schema:Thing](http://schema.org/Thing)
| [ModelRepository](ModelRepository.md) | [contributor_orcid](contributor_orcid.md) | domain | [NamedThing](NamedThing.md) |
| [ModelRepository](ModelRepository.md) | [contribution_date](contribution_date.md) | domain | [NamedThing](NamedThing.md) |
| [ReferenceDataOrDataset](ReferenceDataOrDataset.md) | [collection](collection.md) | domain | [NamedThing](NamedThing.md) |
+| [ReferenceDataOrDataset](ReferenceDataOrDataset.md) | [has_training_resource](has_training_resource.md) | domain | [NamedThing](NamedThing.md) |
| [ReferenceDataOrDataset](ReferenceDataOrDataset.md) | [purpose_detail](purpose_detail.md) | domain | [NamedThing](NamedThing.md) |
| [ReferenceDataOrDataset](ReferenceDataOrDataset.md) | [is_open](is_open.md) | domain | [NamedThing](NamedThing.md) |
| [ReferenceDataOrDataset](ReferenceDataOrDataset.md) | [requires_registration](requires_registration.md) | domain | [NamedThing](NamedThing.md) |
@@ -223,6 +253,7 @@ URI: [schema:Thing](http://schema.org/Thing)
| [ReferenceDataOrDataset](ReferenceDataOrDataset.md) | [contributor_orcid](contributor_orcid.md) | domain | [NamedThing](NamedThing.md) |
| [ReferenceDataOrDataset](ReferenceDataOrDataset.md) | [contribution_date](contribution_date.md) | domain | [NamedThing](NamedThing.md) |
| [SoftwareOrTool](SoftwareOrTool.md) | [collection](collection.md) | domain | [NamedThing](NamedThing.md) |
+| [SoftwareOrTool](SoftwareOrTool.md) | [has_training_resource](has_training_resource.md) | domain | [NamedThing](NamedThing.md) |
| [SoftwareOrTool](SoftwareOrTool.md) | [purpose_detail](purpose_detail.md) | domain | [NamedThing](NamedThing.md) |
| [SoftwareOrTool](SoftwareOrTool.md) | [is_open](is_open.md) | domain | [NamedThing](NamedThing.md) |
| [SoftwareOrTool](SoftwareOrTool.md) | [requires_registration](requires_registration.md) | domain | [NamedThing](NamedThing.md) |
@@ -240,6 +271,7 @@ URI: [schema:Thing](http://schema.org/Thing)
| [SoftwareOrTool](SoftwareOrTool.md) | [contributor_orcid](contributor_orcid.md) | domain | [NamedThing](NamedThing.md) |
| [SoftwareOrTool](SoftwareOrTool.md) | [contribution_date](contribution_date.md) | domain | [NamedThing](NamedThing.md) |
| [ReferenceImplementation](ReferenceImplementation.md) | [collection](collection.md) | domain | [NamedThing](NamedThing.md) |
+| [ReferenceImplementation](ReferenceImplementation.md) | [has_training_resource](has_training_resource.md) | domain | [NamedThing](NamedThing.md) |
| [ReferenceImplementation](ReferenceImplementation.md) | [purpose_detail](purpose_detail.md) | domain | [NamedThing](NamedThing.md) |
| [ReferenceImplementation](ReferenceImplementation.md) | [is_open](is_open.md) | domain | [NamedThing](NamedThing.md) |
| [ReferenceImplementation](ReferenceImplementation.md) | [requires_registration](requires_registration.md) | domain | [NamedThing](NamedThing.md) |
@@ -257,6 +289,7 @@ URI: [schema:Thing](http://schema.org/Thing)
| [ReferenceImplementation](ReferenceImplementation.md) | [contributor_orcid](contributor_orcid.md) | domain | [NamedThing](NamedThing.md) |
| [ReferenceImplementation](ReferenceImplementation.md) | [contribution_date](contribution_date.md) | domain | [NamedThing](NamedThing.md) |
| [TrainingProgram](TrainingProgram.md) | [collection](collection.md) | domain | [NamedThing](NamedThing.md) |
+| [TrainingProgram](TrainingProgram.md) | [has_training_resource](has_training_resource.md) | domain | [NamedThing](NamedThing.md) |
| [TrainingProgram](TrainingProgram.md) | [purpose_detail](purpose_detail.md) | domain | [NamedThing](NamedThing.md) |
| [TrainingProgram](TrainingProgram.md) | [is_open](is_open.md) | domain | [NamedThing](NamedThing.md) |
| [TrainingProgram](TrainingProgram.md) | [requires_registration](requires_registration.md) | domain | [NamedThing](NamedThing.md) |
@@ -273,6 +306,18 @@ URI: [schema:Thing](http://schema.org/Thing)
| [TrainingProgram](TrainingProgram.md) | [contributor_github_name](contributor_github_name.md) | domain | [NamedThing](NamedThing.md) |
| [TrainingProgram](TrainingProgram.md) | [contributor_orcid](contributor_orcid.md) | domain | [NamedThing](NamedThing.md) |
| [TrainingProgram](TrainingProgram.md) | [contribution_date](contribution_date.md) | domain | [NamedThing](NamedThing.md) |
+| [DataSubstrate](DataSubstrate.md) | [metadata_storage](metadata_storage.md) | domain | [NamedThing](NamedThing.md) |
+| [DataSubstrate](DataSubstrate.md) | [file_extensions](file_extensions.md) | domain | [NamedThing](NamedThing.md) |
+| [DataSubstrate](DataSubstrate.md) | [limitations](limitations.md) | domain | [NamedThing](NamedThing.md) |
+| [DataSubstrate](DataSubstrate.md) | [category](category.md) | domain | [NamedThing](NamedThing.md) |
+| [DataSubstrate](DataSubstrate.md) | [subclass_of](subclass_of.md) | domain | [NamedThing](NamedThing.md) |
+| [DataSubstrate](DataSubstrate.md) | [subclass_of](subclass_of.md) | range | [NamedThing](NamedThing.md) |
+| [DataSubstrate](DataSubstrate.md) | [related_to](related_to.md) | domain | [NamedThing](NamedThing.md) |
+| [DataSubstrate](DataSubstrate.md) | [related_to](related_to.md) | range | [NamedThing](NamedThing.md) |
+| [DataSubstrate](DataSubstrate.md) | [contributor_name](contributor_name.md) | domain | [NamedThing](NamedThing.md) |
+| [DataSubstrate](DataSubstrate.md) | [contributor_github_name](contributor_github_name.md) | domain | [NamedThing](NamedThing.md) |
+| [DataSubstrate](DataSubstrate.md) | [contributor_orcid](contributor_orcid.md) | domain | [NamedThing](NamedThing.md) |
+| [DataSubstrate](DataSubstrate.md) | [contribution_date](contribution_date.md) | domain | [NamedThing](NamedThing.md) |
| [DataTopic](DataTopic.md) | [category](category.md) | domain | [NamedThing](NamedThing.md) |
| [DataTopic](DataTopic.md) | [subclass_of](subclass_of.md) | domain | [NamedThing](NamedThing.md) |
| [DataTopic](DataTopic.md) | [subclass_of](subclass_of.md) | range | [NamedThing](NamedThing.md) |
@@ -282,24 +327,6 @@ URI: [schema:Thing](http://schema.org/Thing)
| [DataTopic](DataTopic.md) | [contributor_github_name](contributor_github_name.md) | domain | [NamedThing](NamedThing.md) |
| [DataTopic](DataTopic.md) | [contributor_orcid](contributor_orcid.md) | domain | [NamedThing](NamedThing.md) |
| [DataTopic](DataTopic.md) | [contribution_date](contribution_date.md) | domain | [NamedThing](NamedThing.md) |
-| [NamedThing](NamedThing.md) | [category](category.md) | domain | [NamedThing](NamedThing.md) |
-| [NamedThing](NamedThing.md) | [subclass_of](subclass_of.md) | domain | [NamedThing](NamedThing.md) |
-| [NamedThing](NamedThing.md) | [subclass_of](subclass_of.md) | range | [NamedThing](NamedThing.md) |
-| [NamedThing](NamedThing.md) | [related_to](related_to.md) | domain | [NamedThing](NamedThing.md) |
-| [NamedThing](NamedThing.md) | [related_to](related_to.md) | range | [NamedThing](NamedThing.md) |
-| [NamedThing](NamedThing.md) | [contributor_name](contributor_name.md) | domain | [NamedThing](NamedThing.md) |
-| [NamedThing](NamedThing.md) | [contributor_github_name](contributor_github_name.md) | domain | [NamedThing](NamedThing.md) |
-| [NamedThing](NamedThing.md) | [contributor_orcid](contributor_orcid.md) | domain | [NamedThing](NamedThing.md) |
-| [NamedThing](NamedThing.md) | [contribution_date](contribution_date.md) | domain | [NamedThing](NamedThing.md) |
-| [AnatomicalEntity](AnatomicalEntity.md) | [category](category.md) | domain | [NamedThing](NamedThing.md) |
-| [AnatomicalEntity](AnatomicalEntity.md) | [subclass_of](subclass_of.md) | domain | [NamedThing](NamedThing.md) |
-| [AnatomicalEntity](AnatomicalEntity.md) | [subclass_of](subclass_of.md) | range | [NamedThing](NamedThing.md) |
-| [AnatomicalEntity](AnatomicalEntity.md) | [related_to](related_to.md) | domain | [NamedThing](NamedThing.md) |
-| [AnatomicalEntity](AnatomicalEntity.md) | [related_to](related_to.md) | range | [NamedThing](NamedThing.md) |
-| [AnatomicalEntity](AnatomicalEntity.md) | [contributor_name](contributor_name.md) | domain | [NamedThing](NamedThing.md) |
-| [AnatomicalEntity](AnatomicalEntity.md) | [contributor_github_name](contributor_github_name.md) | domain | [NamedThing](NamedThing.md) |
-| [AnatomicalEntity](AnatomicalEntity.md) | [contributor_orcid](contributor_orcid.md) | domain | [NamedThing](NamedThing.md) |
-| [AnatomicalEntity](AnatomicalEntity.md) | [contribution_date](contribution_date.md) | domain | [NamedThing](NamedThing.md) |
| [Organization](Organization.md) | [url](url.md) | domain | [NamedThing](NamedThing.md) |
| [Organization](Organization.md) | [related_to](related_to.md) | domain | [NamedThing](NamedThing.md) |
| [Organization](Organization.md) | [related_to](related_to.md) | range | [NamedThing](NamedThing.md) |
@@ -310,18 +337,26 @@ URI: [schema:Thing](http://schema.org/Thing)
| [Organization](Organization.md) | [contributor_github_name](contributor_github_name.md) | domain | [NamedThing](NamedThing.md) |
| [Organization](Organization.md) | [contributor_orcid](contributor_orcid.md) | domain | [NamedThing](NamedThing.md) |
| [Organization](Organization.md) | [contribution_date](contribution_date.md) | domain | [NamedThing](NamedThing.md) |
-| [DataSubstrate](DataSubstrate.md) | [metadata_storage](metadata_storage.md) | domain | [NamedThing](NamedThing.md) |
-| [DataSubstrate](DataSubstrate.md) | [file_extensions](file_extensions.md) | domain | [NamedThing](NamedThing.md) |
-| [DataSubstrate](DataSubstrate.md) | [limitations](limitations.md) | domain | [NamedThing](NamedThing.md) |
-| [DataSubstrate](DataSubstrate.md) | [category](category.md) | domain | [NamedThing](NamedThing.md) |
-| [DataSubstrate](DataSubstrate.md) | [subclass_of](subclass_of.md) | domain | [NamedThing](NamedThing.md) |
-| [DataSubstrate](DataSubstrate.md) | [subclass_of](subclass_of.md) | range | [NamedThing](NamedThing.md) |
-| [DataSubstrate](DataSubstrate.md) | [related_to](related_to.md) | domain | [NamedThing](NamedThing.md) |
-| [DataSubstrate](DataSubstrate.md) | [related_to](related_to.md) | range | [NamedThing](NamedThing.md) |
-| [DataSubstrate](DataSubstrate.md) | [contributor_name](contributor_name.md) | domain | [NamedThing](NamedThing.md) |
-| [DataSubstrate](DataSubstrate.md) | [contributor_github_name](contributor_github_name.md) | domain | [NamedThing](NamedThing.md) |
-| [DataSubstrate](DataSubstrate.md) | [contributor_orcid](contributor_orcid.md) | domain | [NamedThing](NamedThing.md) |
-| [DataSubstrate](DataSubstrate.md) | [contribution_date](contribution_date.md) | domain | [NamedThing](NamedThing.md) |
+| [UseCase](UseCase.md) | [use_case_category](use_case_category.md) | domain | [NamedThing](NamedThing.md) |
+| [UseCase](UseCase.md) | [known_limitations](known_limitations.md) | domain | [NamedThing](NamedThing.md) |
+| [UseCase](UseCase.md) | [data_topics](data_topics.md) | domain | [NamedThing](NamedThing.md) |
+| [UseCase](UseCase.md) | [data_substrates](data_substrates.md) | domain | [NamedThing](NamedThing.md) |
+| [UseCase](UseCase.md) | [standards_and_tools_for_dgp_use](standards_and_tools_for_dgp_use.md) | domain | [NamedThing](NamedThing.md) |
+| [UseCase](UseCase.md) | [alternative_standards_and_tools](alternative_standards_and_tools.md) | domain | [NamedThing](NamedThing.md) |
+| [UseCase](UseCase.md) | [enables](enables.md) | domain | [NamedThing](NamedThing.md) |
+| [UseCase](UseCase.md) | [involved_in_experimental_design](involved_in_experimental_design.md) | domain | [NamedThing](NamedThing.md) |
+| [UseCase](UseCase.md) | [involved_in_metadata_management](involved_in_metadata_management.md) | domain | [NamedThing](NamedThing.md) |
+| [UseCase](UseCase.md) | [involved_in_quality_control](involved_in_quality_control.md) | domain | [NamedThing](NamedThing.md) |
+| [UseCase](UseCase.md) | [xref](xref.md) | domain | [NamedThing](NamedThing.md) |
+| [UseCase](UseCase.md) | [category](category.md) | domain | [NamedThing](NamedThing.md) |
+| [UseCase](UseCase.md) | [subclass_of](subclass_of.md) | domain | [NamedThing](NamedThing.md) |
+| [UseCase](UseCase.md) | [subclass_of](subclass_of.md) | range | [NamedThing](NamedThing.md) |
+| [UseCase](UseCase.md) | [related_to](related_to.md) | domain | [NamedThing](NamedThing.md) |
+| [UseCase](UseCase.md) | [related_to](related_to.md) | range | [NamedThing](NamedThing.md) |
+| [UseCase](UseCase.md) | [contributor_name](contributor_name.md) | domain | [NamedThing](NamedThing.md) |
+| [UseCase](UseCase.md) | [contributor_github_name](contributor_github_name.md) | domain | [NamedThing](NamedThing.md) |
+| [UseCase](UseCase.md) | [contributor_orcid](contributor_orcid.md) | domain | [NamedThing](NamedThing.md) |
+| [UseCase](UseCase.md) | [contribution_date](contribution_date.md) | domain | [NamedThing](NamedThing.md) |
@@ -344,7 +379,6 @@ URI: [schema:Thing](http://schema.org/Thing)
-
## Mappings
| Mapping Type | Mapped Value |
@@ -356,6 +390,8 @@ URI: [schema:Thing](http://schema.org/Thing)
+
+
## LinkML Source
@@ -367,7 +403,6 @@ URI: [schema:Thing](http://schema.org/Thing)
name: NamedThing
description: A generic grouping for any identifiable entity
from_schema: https://w3id.org/bridge2ai/standards-schema-all
-rank: 1000
slots:
- id
- category
@@ -391,7 +426,6 @@ class_uri: schema:Thing
name: NamedThing
description: A generic grouping for any identifiable entity
from_schema: https://w3id.org/bridge2ai/standards-schema-all
-rank: 1000
attributes:
id:
name: id
@@ -455,20 +489,19 @@ attributes:
rank: 1000
is_a: related_to
domain: NamedThing
- multivalued: true
inherited: true
alias: subclass_of
owner: NamedThing
domain_of:
- NamedThing
range: NamedThing
+ multivalued: true
related_to:
name: related_to
description: A relationship that is asserted between two named things.
from_schema: https://w3id.org/bridge2ai/standards-schema-all
rank: 1000
domain: NamedThing
- multivalued: true
inherited: true
alias: related_to
owner: NamedThing
@@ -477,6 +510,7 @@ attributes:
- Organization
symmetric: true
range: NamedThing
+ multivalued: true
contributor_name:
name: contributor_name
description: The name of the person who added this node.
diff --git a/docs/NcitIdentifier.md b/docs/NcitIdentifier.md
index a66e2ec..fffc9bc 100644
--- a/docs/NcitIdentifier.md
+++ b/docs/NcitIdentifier.md
@@ -1,9 +1,12 @@
# Type: NcitIdentifier
+
+
_Identifier from NCIT reference terminology with broad coverage of the cancer domain._
+
URI: [xsd:anyURI](http://www.w3.org/2001/XMLSchema#anyURI)
* [base](https://w3id.org/linkml/base): URIorCURIE
@@ -43,3 +46,13 @@ Instances of this class *should* have identifiers with one of the following pref
+
+## Mappings
+
+| Mapping Type | Mapped Value |
+| --- | --- |
+| self | https://w3id.org/bridge2ai/standards-schema-all/:ncit_identifier |
+| native | https://w3id.org/bridge2ai/standards-schema-all/:ncit_identifier |
+
+
+
diff --git a/docs/Ncname.md b/docs/Ncname.md
index 9a0105c..bc9d4ff 100644
--- a/docs/Ncname.md
+++ b/docs/Ncname.md
@@ -1,9 +1,12 @@
# Type: Ncname
+
+
_Prefix part of CURIE_
+
URI: [xsd:string](http://www.w3.org/2001/XMLSchema#string)
* [base](https://w3id.org/linkml/base): NCName
@@ -34,3 +37,13 @@ URI: [xsd:string](http://www.w3.org/2001/XMLSchema#string)
+
+## Mappings
+
+| Mapping Type | Mapped Value |
+| --- | --- |
+| self | xsd:string |
+| native | https://w3id.org/bridge2ai/standards-schema-all/:ncname |
+
+
+
diff --git a/docs/Nodeidentifier.md b/docs/Nodeidentifier.md
index d443b4d..9af1a33 100644
--- a/docs/Nodeidentifier.md
+++ b/docs/Nodeidentifier.md
@@ -1,9 +1,12 @@
# Type: Nodeidentifier
+
+
_A URI, CURIE or BNODE that represents a node in a model._
+
URI: [shex:nonLiteral](http://www.w3.org/ns/shex#nonLiteral)
* [base](https://w3id.org/linkml/base): NodeIdentifier
@@ -34,3 +37,13 @@ URI: [shex:nonLiteral](http://www.w3.org/ns/shex#nonLiteral)
+
+## Mappings
+
+| Mapping Type | Mapped Value |
+| --- | --- |
+| self | shex:nonLiteral |
+| native | https://w3id.org/bridge2ai/standards-schema-all/:nodeidentifier |
+
+
+
diff --git a/docs/Objectidentifier.md b/docs/Objectidentifier.md
index 9c752bd..4ec4591 100644
--- a/docs/Objectidentifier.md
+++ b/docs/Objectidentifier.md
@@ -1,9 +1,12 @@
# Type: Objectidentifier
+
+
_A URI or CURIE that represents an object in the model._
+
URI: [shex:iri](http://www.w3.org/ns/shex#iri)
* [base](https://w3id.org/linkml/base): ElementIdentifier
@@ -21,7 +24,7 @@ URI: [shex:iri](http://www.w3.org/ns/shex#iri)
## Comments
-* Used for inheritence and type checking
+* Used for inheritance and type checking
## Identifier and Mapping Information
@@ -38,3 +41,13 @@ URI: [shex:iri](http://www.w3.org/ns/shex#iri)
+
+## Mappings
+
+| Mapping Type | Mapped Value |
+| --- | --- |
+| self | shex:iri |
+| native | https://w3id.org/bridge2ai/standards-schema-all/:objectidentifier |
+
+
+
diff --git a/docs/OntologyOrVocabulary.md b/docs/OntologyOrVocabulary.md
index cd02248..ca35bbd 100644
--- a/docs/OntologyOrVocabulary.md
+++ b/docs/OntologyOrVocabulary.md
@@ -1,27 +1,47 @@
+
+
# Class: OntologyOrVocabulary
+
+
_A set of concepts and categories, potentially defined or accompanied by their hierarchical relationships._
+
URI: [https://w3id.org/bridge2ai/standards-schema-all/:OntologyOrVocabulary](https://w3id.org/bridge2ai/standards-schema-all/:OntologyOrVocabulary)
+
+
+
```mermaid
classDiagram
class OntologyOrVocabulary
+ click OntologyOrVocabulary href "../OntologyOrVocabulary"
DataStandardOrTool <|-- OntologyOrVocabulary
+ click DataStandardOrTool href "../DataStandardOrTool"
OntologyOrVocabulary : category
OntologyOrVocabulary : collection
- OntologyOrVocabulary ..> StandardsCollectionTag : collection
+
+
+
+ OntologyOrVocabulary --> "*" StandardsCollectionTag : collection
+ click StandardsCollectionTag href "../StandardsCollectionTag"
+
OntologyOrVocabulary : concerns_data_topic
- OntologyOrVocabulary ..> DataTopic : concerns_data_topic
+
+
+
+ OntologyOrVocabulary --> "*" DataTopic : concerns_data_topic
+ click DataTopic href "../DataTopic"
+
OntologyOrVocabulary : contribution_date
@@ -37,7 +57,21 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:OntologyOrVocabulary](htt
OntologyOrVocabulary : has_relevant_organization
- OntologyOrVocabulary ..> Organization : has_relevant_organization
+
+
+
+ OntologyOrVocabulary --> "*" Organization : has_relevant_organization
+ click Organization href "../Organization"
+
+
+ OntologyOrVocabulary : has_training_resource
+
+
+
+
+ OntologyOrVocabulary --> "*" DataStandardOrTool : has_training_resource
+ click DataStandardOrTool href "../DataStandardOrTool"
+
OntologyOrVocabulary : id
@@ -53,13 +87,23 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:OntologyOrVocabulary](htt
OntologyOrVocabulary : related_to
- OntologyOrVocabulary ..> NamedThing : related_to
+
+
+
+ OntologyOrVocabulary --> "*" NamedThing : related_to
+ click NamedThing href "../NamedThing"
+
OntologyOrVocabulary : requires_registration
OntologyOrVocabulary : subclass_of
- OntologyOrVocabulary ..> NamedThing : subclass_of
+
+
+
+ OntologyOrVocabulary --> "*" NamedThing : subclass_of
+ click NamedThing href "../NamedThing"
+
OntologyOrVocabulary : url
@@ -81,22 +125,23 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:OntologyOrVocabulary](htt
| Name | Cardinality and Range | Description | Inheritance |
| --- | --- | --- | --- |
-| [collection](collection.md) | 0..*
[StandardsCollectionTag](StandardsCollectionTag.md) | Tags for specific sets of standards | [DataStandardOrTool](DataStandardOrTool.md) |
-| [concerns_data_topic](concerns_data_topic.md) | 0..*
[DataTopic](DataTopic.md) | Subject standard is generally applied in the context of object data topic | [DataStandardOrTool](DataStandardOrTool.md) |
-| [has_relevant_organization](has_relevant_organization.md) | 0..*
[Organization](Organization.md) | Subject standard is managed or otherwise guided buy the object organization(s... | [DataStandardOrTool](DataStandardOrTool.md) |
+| [collection](collection.md) | *
[StandardsCollectionTag](StandardsCollectionTag.md) | Tags for specific sets of standards | [DataStandardOrTool](DataStandardOrTool.md) |
+| [concerns_data_topic](concerns_data_topic.md) | *
[DataTopic](DataTopic.md) | Subject standard is generally applied in the context of object data topic | [DataStandardOrTool](DataStandardOrTool.md) |
+| [has_relevant_organization](has_relevant_organization.md) | *
[Organization](Organization.md) | Subject standard is managed or otherwise guided buy the object organization(s... | [DataStandardOrTool](DataStandardOrTool.md) |
+| [has_training_resource](has_training_resource.md) | *
[DataStandardOrTool](DataStandardOrTool.md) | Relevant training resources, standard usage manuals, or other documentation f... | [DataStandardOrTool](DataStandardOrTool.md) |
| [purpose_detail](purpose_detail.md) | 0..1
[String](String.md) | Text description of the standard or tool | [DataStandardOrTool](DataStandardOrTool.md) |
| [is_open](is_open.md) | 0..1
[Boolean](Boolean.md) | Is the standard or tool FAIR and available free of cost? | [DataStandardOrTool](DataStandardOrTool.md) |
-| [requires_registration](requires_registration.md) | 0..1
[Boolean](Boolean.md) | Does usage of the standard or tool require registrion of a user or group with... | [DataStandardOrTool](DataStandardOrTool.md) |
+| [requires_registration](requires_registration.md) | 0..1
[Boolean](Boolean.md) | Does usage of the standard or tool require registration of a user or group wi... | [DataStandardOrTool](DataStandardOrTool.md) |
| [url](url.md) | 0..1
[Uriorcurie](Uriorcurie.md) | URL for basic documentation of the standard or tool | [DataStandardOrTool](DataStandardOrTool.md) |
| [publication](publication.md) | 0..1
[Uriorcurie](Uriorcurie.md) | Relevant publication for the standard or tool | [DataStandardOrTool](DataStandardOrTool.md) |
| [formal_specification](formal_specification.md) | 0..1
[Uriorcurie](Uriorcurie.md) | Relevant code repository or other location for a formal specification of the ... | [DataStandardOrTool](DataStandardOrTool.md) |
| [not_relevant_to_dgps](not_relevant_to_dgps.md) | 0..1
[Boolean](Boolean.md) | Is the standard or tool currently relevant to DGPs? | [DataStandardOrTool](DataStandardOrTool.md) |
-| [id](id.md) | 1..1
[Uriorcurie](Uriorcurie.md) | A unique identifier for a thing | [NamedThing](NamedThing.md) |
+| [id](id.md) | 1
[Uriorcurie](Uriorcurie.md) | A unique identifier for a thing | [NamedThing](NamedThing.md) |
| [category](category.md) | 0..1
[CategoryType](CategoryType.md) | Name of the high level ontology class in which this entity is categorized | [NamedThing](NamedThing.md) |
| [name](name.md) | 0..1
[String](String.md) | A human-readable name for a thing | [NamedThing](NamedThing.md) |
| [description](description.md) | 0..1
[String](String.md) | A human-readable description for a thing | [NamedThing](NamedThing.md) |
-| [subclass_of](subclass_of.md) | 0..*
[NamedThing](NamedThing.md) | Holds between two classes where the domain class is a specialization of the r... | [NamedThing](NamedThing.md) |
-| [related_to](related_to.md) | 0..*
[NamedThing](NamedThing.md) | A relationship that is asserted between two named things | [NamedThing](NamedThing.md) |
+| [subclass_of](subclass_of.md) | *
[NamedThing](NamedThing.md) | Holds between two classes where the domain class is a specialization of the r... | [NamedThing](NamedThing.md) |
+| [related_to](related_to.md) | *
[NamedThing](NamedThing.md) | A relationship that is asserted between two named things | [NamedThing](NamedThing.md) |
| [contributor_name](contributor_name.md) | 0..1
[String](String.md) | The name of the person who added this node | [NamedThing](NamedThing.md) |
| [contributor_github_name](contributor_github_name.md) | 0..1
[String](String.md) | The name of the github user who added this node | [NamedThing](NamedThing.md) |
| [contributor_orcid](contributor_orcid.md) | 0..1
[Uriorcurie](Uriorcurie.md) | The ORCiD of the person who added this node | [NamedThing](NamedThing.md) |
@@ -126,7 +171,6 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:OntologyOrVocabulary](htt
-
## Mappings
| Mapping Type | Mapped Value |
@@ -138,6 +182,8 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:OntologyOrVocabulary](htt
+
+
## LinkML Source
@@ -150,7 +196,6 @@ name: OntologyOrVocabulary
description: A set of concepts and categories, potentially defined or accompanied
by their hierarchical relationships.
from_schema: https://w3id.org/bridge2ai/standards-schema-all
-rank: 1000
is_a: DataStandardOrTool
```
@@ -164,7 +209,6 @@ name: OntologyOrVocabulary
description: A set of concepts and categories, potentially defined or accompanied
by their hierarchical relationships.
from_schema: https://w3id.org/bridge2ai/standards-schema-all
-rank: 1000
is_a: DataStandardOrTool
attributes:
collection:
@@ -174,12 +218,12 @@ attributes:
rank: 1000
is_a: node_property
domain: NamedThing
- multivalued: true
alias: collection
owner: OntologyOrVocabulary
domain_of:
- DataStandardOrTool
range: StandardsCollectionTag
+ multivalued: true
concerns_data_topic:
name: concerns_data_topic
description: Subject standard is generally applied in the context of object data
@@ -188,13 +232,13 @@ attributes:
rank: 1000
is_a: related_to
domain: DataStandardOrTool
- multivalued: true
inherited: true
alias: concerns_data_topic
owner: OntologyOrVocabulary
domain_of:
- DataStandardOrTool
range: DataTopic
+ multivalued: true
has_relevant_organization:
name: has_relevant_organization
description: Subject standard is managed or otherwise guided buy the object organization(s).
@@ -202,13 +246,27 @@ attributes:
rank: 1000
is_a: related_to
domain: DataStandardOrTool
- multivalued: true
inherited: true
alias: has_relevant_organization
owner: OntologyOrVocabulary
domain_of:
- DataStandardOrTool
range: Organization
+ multivalued: true
+ has_training_resource:
+ name: has_training_resource
+ description: Relevant training resources, standard usage manuals, or other documentation
+ for the standard or tool.
+ from_schema: https://w3id.org/bridge2ai/standards-schema-all
+ rank: 1000
+ is_a: node_property
+ domain: NamedThing
+ alias: has_training_resource
+ owner: OntologyOrVocabulary
+ domain_of:
+ - DataStandardOrTool
+ range: DataStandardOrTool
+ multivalued: true
purpose_detail:
name: purpose_detail
description: Text description of the standard or tool.
@@ -235,8 +293,8 @@ attributes:
range: boolean
requires_registration:
name: requires_registration
- description: Does usage of the standard or tool require registrion of a user or
- group with some organization or managerial body?
+ description: Does usage of the standard or tool require registration of a user
+ or group with some organization or managerial body?
from_schema: https://w3id.org/bridge2ai/standards-schema-all
rank: 1000
is_a: node_property
@@ -358,20 +416,19 @@ attributes:
rank: 1000
is_a: related_to
domain: NamedThing
- multivalued: true
inherited: true
alias: subclass_of
owner: OntologyOrVocabulary
domain_of:
- NamedThing
range: NamedThing
+ multivalued: true
related_to:
name: related_to
description: A relationship that is asserted between two named things.
from_schema: https://w3id.org/bridge2ai/standards-schema-all
rank: 1000
domain: NamedThing
- multivalued: true
inherited: true
alias: related_to
owner: OntologyOrVocabulary
@@ -380,6 +437,7 @@ attributes:
- Organization
symmetric: true
range: NamedThing
+ multivalued: true
contributor_name:
name: contributor_name
description: The name of the person who added this node.
diff --git a/docs/Organization.md b/docs/Organization.md
index 6ac23ee..69af1a0 100644
--- a/docs/Organization.md
+++ b/docs/Organization.md
@@ -1,17 +1,27 @@
+
+
# Class: Organization
+
+
_Represents a group or organization related to or responsible for one or more Bridge2AI standards._
+
URI: [https://w3id.org/bridge2ai/standards-schema-all/:Organization](https://w3id.org/bridge2ai/standards-schema-all/:Organization)
+
+
+
```mermaid
classDiagram
class Organization
+ click Organization href "../Organization"
NamedThing <|-- Organization
+ click NamedThing href "../NamedThing"
Organization : category
@@ -31,13 +41,23 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:Organization](https://w3i
Organization : related_to
- Organization ..> NamedThing : related_to
+
+
+
+ Organization --> "*" NamedThing : related_to
+ click NamedThing href "../NamedThing"
+
Organization : ror_id
Organization : subclass_of
- Organization ..> NamedThing : subclass_of
+
+
+
+ Organization --> "*" NamedThing : subclass_of
+ click NamedThing href "../NamedThing"
+
Organization : url
@@ -63,12 +83,12 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:Organization](https://w3i
| [ror_id](ror_id.md) | 0..1
[RorIdentifier](RorIdentifier.md) | Unique ROR identifier | direct |
| [wikidata_id](wikidata_id.md) | 0..1
[WikidataIdentifier](WikidataIdentifier.md) | Unique Wikidata identifier | direct |
| [url](url.md) | 0..1
[Uriorcurie](Uriorcurie.md) | URL for basic documentation of the standard or tool | direct |
-| [related_to](related_to.md) | 0..*
[NamedThing](NamedThing.md) | A relationship that is asserted between two named things | direct |
-| [id](id.md) | 1..1
[Uriorcurie](Uriorcurie.md) | A unique identifier for a thing | [NamedThing](NamedThing.md) |
+| [related_to](related_to.md) | *
[NamedThing](NamedThing.md) | A relationship that is asserted between two named things | direct |
+| [id](id.md) | 1
[Uriorcurie](Uriorcurie.md) | A unique identifier for a thing | [NamedThing](NamedThing.md) |
| [category](category.md) | 0..1
[CategoryType](CategoryType.md) | Name of the high level ontology class in which this entity is categorized | [NamedThing](NamedThing.md) |
| [name](name.md) | 0..1
[String](String.md) | A human-readable name for a thing | [NamedThing](NamedThing.md) |
| [description](description.md) | 0..1
[String](String.md) | A human-readable description for a thing | [NamedThing](NamedThing.md) |
-| [subclass_of](subclass_of.md) | 0..*
[NamedThing](NamedThing.md) | Holds between two classes where the domain class is a specialization of the r... | [NamedThing](NamedThing.md) |
+| [subclass_of](subclass_of.md) | *
[NamedThing](NamedThing.md) | Holds between two classes where the domain class is a specialization of the r... | [NamedThing](NamedThing.md) |
| [contributor_name](contributor_name.md) | 0..1
[String](String.md) | The name of the person who added this node | [NamedThing](NamedThing.md) |
| [contributor_github_name](contributor_github_name.md) | 0..1
[String](String.md) | The name of the github user who added this node | [NamedThing](NamedThing.md) |
| [contributor_orcid](contributor_orcid.md) | 0..1
[Uriorcurie](Uriorcurie.md) | The ORCiD of the person who added this node | [NamedThing](NamedThing.md) |
@@ -115,7 +135,6 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:Organization](https://w3i
-
## Mappings
| Mapping Type | Mapped Value |
@@ -127,6 +146,8 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:Organization](https://w3i
+
+
## LinkML Source
@@ -139,7 +160,6 @@ name: Organization
description: Represents a group or organization related to or responsible for one
or more Bridge2AI standards.
from_schema: https://w3id.org/bridge2ai/standards-schema-all
-rank: 1000
is_a: NamedThing
slots:
- ror_id
@@ -158,7 +178,6 @@ name: Organization
description: Represents a group or organization related to or responsible for one
or more Bridge2AI standards.
from_schema: https://w3id.org/bridge2ai/standards-schema-all
-rank: 1000
is_a: NamedThing
attributes:
ror_id:
@@ -208,7 +227,6 @@ attributes:
from_schema: https://w3id.org/bridge2ai/standards-schema-all
rank: 1000
domain: NamedThing
- multivalued: true
inherited: true
alias: related_to
owner: Organization
@@ -217,6 +235,7 @@ attributes:
- Organization
symmetric: true
range: NamedThing
+ multivalued: true
id:
name: id
description: A unique identifier for a thing.
@@ -279,13 +298,13 @@ attributes:
rank: 1000
is_a: related_to
domain: NamedThing
- multivalued: true
inherited: true
alias: subclass_of
owner: Organization
domain_of:
- NamedThing
range: NamedThing
+ multivalued: true
contributor_name:
name: contributor_name
description: The name of the person who added this node.
diff --git a/docs/OrganizationContainer.md b/docs/OrganizationContainer.md
index 6c7c7a6..a736d5e 100644
--- a/docs/OrganizationContainer.md
+++ b/docs/OrganizationContainer.md
@@ -1,19 +1,33 @@
+
+
# Class: OrganizationContainer
+
+
_A container for Organizations._
+
URI: [https://w3id.org/bridge2ai/standards-schema-all/:OrganizationContainer](https://w3id.org/bridge2ai/standards-schema-all/:OrganizationContainer)
+
+
+
```mermaid
classDiagram
class OrganizationContainer
+ click OrganizationContainer href "../OrganizationContainer"
OrganizationContainer : organizations
- OrganizationContainer ..> Organization : organizations
+
+
+
+ OrganizationContainer --> "*" Organization : organizations
+ click Organization href "../Organization"
+
```
@@ -28,7 +42,7 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:OrganizationContainer](ht
| Name | Cardinality and Range | Description | Inheritance |
| --- | --- | --- | --- |
-| [organizations](organizations.md) | 0..*
[Organization](Organization.md) | Collection of associated organizations | direct |
+| [organizations](organizations.md) | *
[Organization](Organization.md) | Collection of associated organizations | direct |
@@ -54,7 +68,6 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:OrganizationContainer](ht
-
## Mappings
| Mapping Type | Mapped Value |
@@ -66,6 +79,8 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:OrganizationContainer](ht
+
+
## LinkML Source
@@ -77,7 +92,6 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:OrganizationContainer](ht
name: OrganizationContainer
description: A container for Organizations.
from_schema: https://w3id.org/bridge2ai/standards-schema-all
-rank: 1000
slots:
- organizations
@@ -91,19 +105,18 @@ slots:
name: OrganizationContainer
description: A container for Organizations.
from_schema: https://w3id.org/bridge2ai/standards-schema-all
-rank: 1000
attributes:
organizations:
name: organizations
description: Collection of associated organizations.
from_schema: https://w3id.org/bridge2ai/standards-schema-all
rank: 1000
- multivalued: true
alias: organizations
owner: OrganizationContainer
domain_of:
- OrganizationContainer
range: Organization
+ multivalued: true
inlined: true
inlined_as_list: true
diff --git a/docs/ReferenceDataOrDataset.md b/docs/ReferenceDataOrDataset.md
index 7db7d64..38723c6 100644
--- a/docs/ReferenceDataOrDataset.md
+++ b/docs/ReferenceDataOrDataset.md
@@ -1,27 +1,47 @@
+
+
# Class: ReferenceDataOrDataset
+
+
_Represents a resource in the Bridge2AI Standards Registry serving as a standardized, reusable data source._
+
URI: [https://w3id.org/bridge2ai/standards-schema-all/:ReferenceDataOrDataset](https://w3id.org/bridge2ai/standards-schema-all/:ReferenceDataOrDataset)
+
+
+
```mermaid
classDiagram
class ReferenceDataOrDataset
+ click ReferenceDataOrDataset href "../ReferenceDataOrDataset"
DataStandardOrTool <|-- ReferenceDataOrDataset
+ click DataStandardOrTool href "../DataStandardOrTool"
ReferenceDataOrDataset : category
ReferenceDataOrDataset : collection
- ReferenceDataOrDataset ..> StandardsCollectionTag : collection
+
+
+
+ ReferenceDataOrDataset --> "*" StandardsCollectionTag : collection
+ click StandardsCollectionTag href "../StandardsCollectionTag"
+
ReferenceDataOrDataset : concerns_data_topic
- ReferenceDataOrDataset ..> DataTopic : concerns_data_topic
+
+
+
+ ReferenceDataOrDataset --> "*" DataTopic : concerns_data_topic
+ click DataTopic href "../DataTopic"
+
ReferenceDataOrDataset : contribution_date
@@ -37,7 +57,21 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:ReferenceDataOrDataset](h
ReferenceDataOrDataset : has_relevant_organization
- ReferenceDataOrDataset ..> Organization : has_relevant_organization
+
+
+
+ ReferenceDataOrDataset --> "*" Organization : has_relevant_organization
+ click Organization href "../Organization"
+
+
+ ReferenceDataOrDataset : has_training_resource
+
+
+
+
+ ReferenceDataOrDataset --> "*" DataStandardOrTool : has_training_resource
+ click DataStandardOrTool href "../DataStandardOrTool"
+
ReferenceDataOrDataset : id
@@ -53,13 +87,23 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:ReferenceDataOrDataset](h
ReferenceDataOrDataset : related_to
- ReferenceDataOrDataset ..> NamedThing : related_to
+
+
+
+ ReferenceDataOrDataset --> "*" NamedThing : related_to
+ click NamedThing href "../NamedThing"
+
ReferenceDataOrDataset : requires_registration
ReferenceDataOrDataset : subclass_of
- ReferenceDataOrDataset ..> NamedThing : subclass_of
+
+
+
+ ReferenceDataOrDataset --> "*" NamedThing : subclass_of
+ click NamedThing href "../NamedThing"
+
ReferenceDataOrDataset : url
@@ -81,22 +125,23 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:ReferenceDataOrDataset](h
| Name | Cardinality and Range | Description | Inheritance |
| --- | --- | --- | --- |
-| [collection](collection.md) | 0..*
[StandardsCollectionTag](StandardsCollectionTag.md) | Tags for specific sets of standards | [DataStandardOrTool](DataStandardOrTool.md) |
-| [concerns_data_topic](concerns_data_topic.md) | 0..*
[DataTopic](DataTopic.md) | Subject standard is generally applied in the context of object data topic | [DataStandardOrTool](DataStandardOrTool.md) |
-| [has_relevant_organization](has_relevant_organization.md) | 0..*
[Organization](Organization.md) | Subject standard is managed or otherwise guided buy the object organization(s... | [DataStandardOrTool](DataStandardOrTool.md) |
+| [collection](collection.md) | *
[StandardsCollectionTag](StandardsCollectionTag.md) | Tags for specific sets of standards | [DataStandardOrTool](DataStandardOrTool.md) |
+| [concerns_data_topic](concerns_data_topic.md) | *
[DataTopic](DataTopic.md) | Subject standard is generally applied in the context of object data topic | [DataStandardOrTool](DataStandardOrTool.md) |
+| [has_relevant_organization](has_relevant_organization.md) | *
[Organization](Organization.md) | Subject standard is managed or otherwise guided buy the object organization(s... | [DataStandardOrTool](DataStandardOrTool.md) |
+| [has_training_resource](has_training_resource.md) | *
[DataStandardOrTool](DataStandardOrTool.md) | Relevant training resources, standard usage manuals, or other documentation f... | [DataStandardOrTool](DataStandardOrTool.md) |
| [purpose_detail](purpose_detail.md) | 0..1
[String](String.md) | Text description of the standard or tool | [DataStandardOrTool](DataStandardOrTool.md) |
| [is_open](is_open.md) | 0..1
[Boolean](Boolean.md) | Is the standard or tool FAIR and available free of cost? | [DataStandardOrTool](DataStandardOrTool.md) |
-| [requires_registration](requires_registration.md) | 0..1
[Boolean](Boolean.md) | Does usage of the standard or tool require registrion of a user or group with... | [DataStandardOrTool](DataStandardOrTool.md) |
+| [requires_registration](requires_registration.md) | 0..1
[Boolean](Boolean.md) | Does usage of the standard or tool require registration of a user or group wi... | [DataStandardOrTool](DataStandardOrTool.md) |
| [url](url.md) | 0..1
[Uriorcurie](Uriorcurie.md) | URL for basic documentation of the standard or tool | [DataStandardOrTool](DataStandardOrTool.md) |
| [publication](publication.md) | 0..1
[Uriorcurie](Uriorcurie.md) | Relevant publication for the standard or tool | [DataStandardOrTool](DataStandardOrTool.md) |
| [formal_specification](formal_specification.md) | 0..1
[Uriorcurie](Uriorcurie.md) | Relevant code repository or other location for a formal specification of the ... | [DataStandardOrTool](DataStandardOrTool.md) |
| [not_relevant_to_dgps](not_relevant_to_dgps.md) | 0..1
[Boolean](Boolean.md) | Is the standard or tool currently relevant to DGPs? | [DataStandardOrTool](DataStandardOrTool.md) |
-| [id](id.md) | 1..1
[Uriorcurie](Uriorcurie.md) | A unique identifier for a thing | [NamedThing](NamedThing.md) |
+| [id](id.md) | 1
[Uriorcurie](Uriorcurie.md) | A unique identifier for a thing | [NamedThing](NamedThing.md) |
| [category](category.md) | 0..1
[CategoryType](CategoryType.md) | Name of the high level ontology class in which this entity is categorized | [NamedThing](NamedThing.md) |
| [name](name.md) | 0..1
[String](String.md) | A human-readable name for a thing | [NamedThing](NamedThing.md) |
| [description](description.md) | 0..1
[String](String.md) | A human-readable description for a thing | [NamedThing](NamedThing.md) |
-| [subclass_of](subclass_of.md) | 0..*
[NamedThing](NamedThing.md) | Holds between two classes where the domain class is a specialization of the r... | [NamedThing](NamedThing.md) |
-| [related_to](related_to.md) | 0..*
[NamedThing](NamedThing.md) | A relationship that is asserted between two named things | [NamedThing](NamedThing.md) |
+| [subclass_of](subclass_of.md) | *
[NamedThing](NamedThing.md) | Holds between two classes where the domain class is a specialization of the r... | [NamedThing](NamedThing.md) |
+| [related_to](related_to.md) | *
[NamedThing](NamedThing.md) | A relationship that is asserted between two named things | [NamedThing](NamedThing.md) |
| [contributor_name](contributor_name.md) | 0..1
[String](String.md) | The name of the person who added this node | [NamedThing](NamedThing.md) |
| [contributor_github_name](contributor_github_name.md) | 0..1
[String](String.md) | The name of the github user who added this node | [NamedThing](NamedThing.md) |
| [contributor_orcid](contributor_orcid.md) | 0..1
[Uriorcurie](Uriorcurie.md) | The ORCiD of the person who added this node | [NamedThing](NamedThing.md) |
@@ -126,7 +171,6 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:ReferenceDataOrDataset](h
-
## Mappings
| Mapping Type | Mapped Value |
@@ -138,6 +182,8 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:ReferenceDataOrDataset](h
+
+
## LinkML Source
@@ -150,7 +196,6 @@ name: ReferenceDataOrDataset
description: Represents a resource in the Bridge2AI Standards Registry serving as
a standardized, reusable data source.
from_schema: https://w3id.org/bridge2ai/standards-schema-all
-rank: 1000
is_a: DataStandardOrTool
```
@@ -164,7 +209,6 @@ name: ReferenceDataOrDataset
description: Represents a resource in the Bridge2AI Standards Registry serving as
a standardized, reusable data source.
from_schema: https://w3id.org/bridge2ai/standards-schema-all
-rank: 1000
is_a: DataStandardOrTool
attributes:
collection:
@@ -174,12 +218,12 @@ attributes:
rank: 1000
is_a: node_property
domain: NamedThing
- multivalued: true
alias: collection
owner: ReferenceDataOrDataset
domain_of:
- DataStandardOrTool
range: StandardsCollectionTag
+ multivalued: true
concerns_data_topic:
name: concerns_data_topic
description: Subject standard is generally applied in the context of object data
@@ -188,13 +232,13 @@ attributes:
rank: 1000
is_a: related_to
domain: DataStandardOrTool
- multivalued: true
inherited: true
alias: concerns_data_topic
owner: ReferenceDataOrDataset
domain_of:
- DataStandardOrTool
range: DataTopic
+ multivalued: true
has_relevant_organization:
name: has_relevant_organization
description: Subject standard is managed or otherwise guided buy the object organization(s).
@@ -202,13 +246,27 @@ attributes:
rank: 1000
is_a: related_to
domain: DataStandardOrTool
- multivalued: true
inherited: true
alias: has_relevant_organization
owner: ReferenceDataOrDataset
domain_of:
- DataStandardOrTool
range: Organization
+ multivalued: true
+ has_training_resource:
+ name: has_training_resource
+ description: Relevant training resources, standard usage manuals, or other documentation
+ for the standard or tool.
+ from_schema: https://w3id.org/bridge2ai/standards-schema-all
+ rank: 1000
+ is_a: node_property
+ domain: NamedThing
+ alias: has_training_resource
+ owner: ReferenceDataOrDataset
+ domain_of:
+ - DataStandardOrTool
+ range: DataStandardOrTool
+ multivalued: true
purpose_detail:
name: purpose_detail
description: Text description of the standard or tool.
@@ -235,8 +293,8 @@ attributes:
range: boolean
requires_registration:
name: requires_registration
- description: Does usage of the standard or tool require registrion of a user or
- group with some organization or managerial body?
+ description: Does usage of the standard or tool require registration of a user
+ or group with some organization or managerial body?
from_schema: https://w3id.org/bridge2ai/standards-schema-all
rank: 1000
is_a: node_property
@@ -358,20 +416,19 @@ attributes:
rank: 1000
is_a: related_to
domain: NamedThing
- multivalued: true
inherited: true
alias: subclass_of
owner: ReferenceDataOrDataset
domain_of:
- NamedThing
range: NamedThing
+ multivalued: true
related_to:
name: related_to
description: A relationship that is asserted between two named things.
from_schema: https://w3id.org/bridge2ai/standards-schema-all
rank: 1000
domain: NamedThing
- multivalued: true
inherited: true
alias: related_to
owner: ReferenceDataOrDataset
@@ -380,6 +437,7 @@ attributes:
- Organization
symmetric: true
range: NamedThing
+ multivalued: true
contributor_name:
name: contributor_name
description: The name of the person who added this node.
diff --git a/docs/ReferenceImplementation.md b/docs/ReferenceImplementation.md
index 7962e88..9ffd4bc 100644
--- a/docs/ReferenceImplementation.md
+++ b/docs/ReferenceImplementation.md
@@ -1,27 +1,47 @@
+
+
# Class: ReferenceImplementation
+
+
_Represents an implementation of one or more standards or tools in the Bridge2AI Standards Registry, whether as a full specification in a particular language or as an application to a specific use case._
+
URI: [https://w3id.org/bridge2ai/standards-schema-all/:ReferenceImplementation](https://w3id.org/bridge2ai/standards-schema-all/:ReferenceImplementation)
+
+
+
```mermaid
classDiagram
class ReferenceImplementation
+ click ReferenceImplementation href "../ReferenceImplementation"
DataStandardOrTool <|-- ReferenceImplementation
+ click DataStandardOrTool href "../DataStandardOrTool"
ReferenceImplementation : category
ReferenceImplementation : collection
- ReferenceImplementation ..> StandardsCollectionTag : collection
+
+
+
+ ReferenceImplementation --> "*" StandardsCollectionTag : collection
+ click StandardsCollectionTag href "../StandardsCollectionTag"
+
ReferenceImplementation : concerns_data_topic
- ReferenceImplementation ..> DataTopic : concerns_data_topic
+
+
+
+ ReferenceImplementation --> "*" DataTopic : concerns_data_topic
+ click DataTopic href "../DataTopic"
+
ReferenceImplementation : contribution_date
@@ -37,7 +57,21 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:ReferenceImplementation](
ReferenceImplementation : has_relevant_organization
- ReferenceImplementation ..> Organization : has_relevant_organization
+
+
+
+ ReferenceImplementation --> "*" Organization : has_relevant_organization
+ click Organization href "../Organization"
+
+
+ ReferenceImplementation : has_training_resource
+
+
+
+
+ ReferenceImplementation --> "*" DataStandardOrTool : has_training_resource
+ click DataStandardOrTool href "../DataStandardOrTool"
+
ReferenceImplementation : id
@@ -53,13 +87,23 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:ReferenceImplementation](
ReferenceImplementation : related_to
- ReferenceImplementation ..> NamedThing : related_to
+
+
+
+ ReferenceImplementation --> "*" NamedThing : related_to
+ click NamedThing href "../NamedThing"
+
ReferenceImplementation : requires_registration
ReferenceImplementation : subclass_of
- ReferenceImplementation ..> NamedThing : subclass_of
+
+
+
+ ReferenceImplementation --> "*" NamedThing : subclass_of
+ click NamedThing href "../NamedThing"
+
ReferenceImplementation : url
@@ -81,22 +125,23 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:ReferenceImplementation](
| Name | Cardinality and Range | Description | Inheritance |
| --- | --- | --- | --- |
-| [collection](collection.md) | 0..*
[StandardsCollectionTag](StandardsCollectionTag.md) | Tags for specific sets of standards | [DataStandardOrTool](DataStandardOrTool.md) |
-| [concerns_data_topic](concerns_data_topic.md) | 0..*
[DataTopic](DataTopic.md) | Subject standard is generally applied in the context of object data topic | [DataStandardOrTool](DataStandardOrTool.md) |
-| [has_relevant_organization](has_relevant_organization.md) | 0..*
[Organization](Organization.md) | Subject standard is managed or otherwise guided buy the object organization(s... | [DataStandardOrTool](DataStandardOrTool.md) |
+| [collection](collection.md) | *
[StandardsCollectionTag](StandardsCollectionTag.md) | Tags for specific sets of standards | [DataStandardOrTool](DataStandardOrTool.md) |
+| [concerns_data_topic](concerns_data_topic.md) | *
[DataTopic](DataTopic.md) | Subject standard is generally applied in the context of object data topic | [DataStandardOrTool](DataStandardOrTool.md) |
+| [has_relevant_organization](has_relevant_organization.md) | *
[Organization](Organization.md) | Subject standard is managed or otherwise guided buy the object organization(s... | [DataStandardOrTool](DataStandardOrTool.md) |
+| [has_training_resource](has_training_resource.md) | *
[DataStandardOrTool](DataStandardOrTool.md) | Relevant training resources, standard usage manuals, or other documentation f... | [DataStandardOrTool](DataStandardOrTool.md) |
| [purpose_detail](purpose_detail.md) | 0..1
[String](String.md) | Text description of the standard or tool | [DataStandardOrTool](DataStandardOrTool.md) |
| [is_open](is_open.md) | 0..1
[Boolean](Boolean.md) | Is the standard or tool FAIR and available free of cost? | [DataStandardOrTool](DataStandardOrTool.md) |
-| [requires_registration](requires_registration.md) | 0..1
[Boolean](Boolean.md) | Does usage of the standard or tool require registrion of a user or group with... | [DataStandardOrTool](DataStandardOrTool.md) |
+| [requires_registration](requires_registration.md) | 0..1
[Boolean](Boolean.md) | Does usage of the standard or tool require registration of a user or group wi... | [DataStandardOrTool](DataStandardOrTool.md) |
| [url](url.md) | 0..1
[Uriorcurie](Uriorcurie.md) | URL for basic documentation of the standard or tool | [DataStandardOrTool](DataStandardOrTool.md) |
| [publication](publication.md) | 0..1
[Uriorcurie](Uriorcurie.md) | Relevant publication for the standard or tool | [DataStandardOrTool](DataStandardOrTool.md) |
| [formal_specification](formal_specification.md) | 0..1
[Uriorcurie](Uriorcurie.md) | Relevant code repository or other location for a formal specification of the ... | [DataStandardOrTool](DataStandardOrTool.md) |
| [not_relevant_to_dgps](not_relevant_to_dgps.md) | 0..1
[Boolean](Boolean.md) | Is the standard or tool currently relevant to DGPs? | [DataStandardOrTool](DataStandardOrTool.md) |
-| [id](id.md) | 1..1
[Uriorcurie](Uriorcurie.md) | A unique identifier for a thing | [NamedThing](NamedThing.md) |
+| [id](id.md) | 1
[Uriorcurie](Uriorcurie.md) | A unique identifier for a thing | [NamedThing](NamedThing.md) |
| [category](category.md) | 0..1
[CategoryType](CategoryType.md) | Name of the high level ontology class in which this entity is categorized | [NamedThing](NamedThing.md) |
| [name](name.md) | 0..1
[String](String.md) | A human-readable name for a thing | [NamedThing](NamedThing.md) |
| [description](description.md) | 0..1
[String](String.md) | A human-readable description for a thing | [NamedThing](NamedThing.md) |
-| [subclass_of](subclass_of.md) | 0..*
[NamedThing](NamedThing.md) | Holds between two classes where the domain class is a specialization of the r... | [NamedThing](NamedThing.md) |
-| [related_to](related_to.md) | 0..*
[NamedThing](NamedThing.md) | A relationship that is asserted between two named things | [NamedThing](NamedThing.md) |
+| [subclass_of](subclass_of.md) | *
[NamedThing](NamedThing.md) | Holds between two classes where the domain class is a specialization of the r... | [NamedThing](NamedThing.md) |
+| [related_to](related_to.md) | *
[NamedThing](NamedThing.md) | A relationship that is asserted between two named things | [NamedThing](NamedThing.md) |
| [contributor_name](contributor_name.md) | 0..1
[String](String.md) | The name of the person who added this node | [NamedThing](NamedThing.md) |
| [contributor_github_name](contributor_github_name.md) | 0..1
[String](String.md) | The name of the github user who added this node | [NamedThing](NamedThing.md) |
| [contributor_orcid](contributor_orcid.md) | 0..1
[Uriorcurie](Uriorcurie.md) | The ORCiD of the person who added this node | [NamedThing](NamedThing.md) |
@@ -126,7 +171,6 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:ReferenceImplementation](
-
## Mappings
| Mapping Type | Mapped Value |
@@ -138,6 +182,8 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:ReferenceImplementation](
+
+
## LinkML Source
@@ -151,7 +197,6 @@ description: Represents an implementation of one or more standards or tools in t
Bridge2AI Standards Registry, whether as a full specification in a particular language
or as an application to a specific use case.
from_schema: https://w3id.org/bridge2ai/standards-schema-all
-rank: 1000
is_a: DataStandardOrTool
```
@@ -166,7 +211,6 @@ description: Represents an implementation of one or more standards or tools in t
Bridge2AI Standards Registry, whether as a full specification in a particular language
or as an application to a specific use case.
from_schema: https://w3id.org/bridge2ai/standards-schema-all
-rank: 1000
is_a: DataStandardOrTool
attributes:
collection:
@@ -176,12 +220,12 @@ attributes:
rank: 1000
is_a: node_property
domain: NamedThing
- multivalued: true
alias: collection
owner: ReferenceImplementation
domain_of:
- DataStandardOrTool
range: StandardsCollectionTag
+ multivalued: true
concerns_data_topic:
name: concerns_data_topic
description: Subject standard is generally applied in the context of object data
@@ -190,13 +234,13 @@ attributes:
rank: 1000
is_a: related_to
domain: DataStandardOrTool
- multivalued: true
inherited: true
alias: concerns_data_topic
owner: ReferenceImplementation
domain_of:
- DataStandardOrTool
range: DataTopic
+ multivalued: true
has_relevant_organization:
name: has_relevant_organization
description: Subject standard is managed or otherwise guided buy the object organization(s).
@@ -204,13 +248,27 @@ attributes:
rank: 1000
is_a: related_to
domain: DataStandardOrTool
- multivalued: true
inherited: true
alias: has_relevant_organization
owner: ReferenceImplementation
domain_of:
- DataStandardOrTool
range: Organization
+ multivalued: true
+ has_training_resource:
+ name: has_training_resource
+ description: Relevant training resources, standard usage manuals, or other documentation
+ for the standard or tool.
+ from_schema: https://w3id.org/bridge2ai/standards-schema-all
+ rank: 1000
+ is_a: node_property
+ domain: NamedThing
+ alias: has_training_resource
+ owner: ReferenceImplementation
+ domain_of:
+ - DataStandardOrTool
+ range: DataStandardOrTool
+ multivalued: true
purpose_detail:
name: purpose_detail
description: Text description of the standard or tool.
@@ -237,8 +295,8 @@ attributes:
range: boolean
requires_registration:
name: requires_registration
- description: Does usage of the standard or tool require registrion of a user or
- group with some organization or managerial body?
+ description: Does usage of the standard or tool require registration of a user
+ or group with some organization or managerial body?
from_schema: https://w3id.org/bridge2ai/standards-schema-all
rank: 1000
is_a: node_property
@@ -360,20 +418,19 @@ attributes:
rank: 1000
is_a: related_to
domain: NamedThing
- multivalued: true
inherited: true
alias: subclass_of
owner: ReferenceImplementation
domain_of:
- NamedThing
range: NamedThing
+ multivalued: true
related_to:
name: related_to
description: A relationship that is asserted between two named things.
from_schema: https://w3id.org/bridge2ai/standards-schema-all
rank: 1000
domain: NamedThing
- multivalued: true
inherited: true
alias: related_to
owner: ReferenceImplementation
@@ -382,6 +439,7 @@ attributes:
- Organization
symmetric: true
range: NamedThing
+ multivalued: true
contributor_name:
name: contributor_name
description: The name of the person who added this node.
diff --git a/docs/Registry.md b/docs/Registry.md
index 0997682..62d1964 100644
--- a/docs/Registry.md
+++ b/docs/Registry.md
@@ -1,27 +1,47 @@
+
+
# Class: Registry
+
+
_Represents a resource in the Bridge2AI Standards Registry serving to curate and/or index other resources._
+
URI: [https://w3id.org/bridge2ai/standards-schema-all/:Registry](https://w3id.org/bridge2ai/standards-schema-all/:Registry)
+
+
+
```mermaid
classDiagram
class Registry
+ click Registry href "../Registry"
DataStandardOrTool <|-- Registry
+ click DataStandardOrTool href "../DataStandardOrTool"
Registry : category
Registry : collection
- Registry ..> StandardsCollectionTag : collection
+
+
+
+ Registry --> "*" StandardsCollectionTag : collection
+ click StandardsCollectionTag href "../StandardsCollectionTag"
+
Registry : concerns_data_topic
- Registry ..> DataTopic : concerns_data_topic
+
+
+
+ Registry --> "*" DataTopic : concerns_data_topic
+ click DataTopic href "../DataTopic"
+
Registry : contribution_date
@@ -37,7 +57,21 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:Registry](https://w3id.or
Registry : has_relevant_organization
- Registry ..> Organization : has_relevant_organization
+
+
+
+ Registry --> "*" Organization : has_relevant_organization
+ click Organization href "../Organization"
+
+
+ Registry : has_training_resource
+
+
+
+
+ Registry --> "*" DataStandardOrTool : has_training_resource
+ click DataStandardOrTool href "../DataStandardOrTool"
+
Registry : id
@@ -53,13 +87,23 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:Registry](https://w3id.or
Registry : related_to
- Registry ..> NamedThing : related_to
+
+
+
+ Registry --> "*" NamedThing : related_to
+ click NamedThing href "../NamedThing"
+
Registry : requires_registration
Registry : subclass_of
- Registry ..> NamedThing : subclass_of
+
+
+
+ Registry --> "*" NamedThing : subclass_of
+ click NamedThing href "../NamedThing"
+
Registry : url
@@ -81,22 +125,23 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:Registry](https://w3id.or
| Name | Cardinality and Range | Description | Inheritance |
| --- | --- | --- | --- |
-| [collection](collection.md) | 0..*
[StandardsCollectionTag](StandardsCollectionTag.md) | Tags for specific sets of standards | [DataStandardOrTool](DataStandardOrTool.md) |
-| [concerns_data_topic](concerns_data_topic.md) | 0..*
[DataTopic](DataTopic.md) | Subject standard is generally applied in the context of object data topic | [DataStandardOrTool](DataStandardOrTool.md) |
-| [has_relevant_organization](has_relevant_organization.md) | 0..*
[Organization](Organization.md) | Subject standard is managed or otherwise guided buy the object organization(s... | [DataStandardOrTool](DataStandardOrTool.md) |
+| [collection](collection.md) | *
[StandardsCollectionTag](StandardsCollectionTag.md) | Tags for specific sets of standards | [DataStandardOrTool](DataStandardOrTool.md) |
+| [concerns_data_topic](concerns_data_topic.md) | *
[DataTopic](DataTopic.md) | Subject standard is generally applied in the context of object data topic | [DataStandardOrTool](DataStandardOrTool.md) |
+| [has_relevant_organization](has_relevant_organization.md) | *
[Organization](Organization.md) | Subject standard is managed or otherwise guided buy the object organization(s... | [DataStandardOrTool](DataStandardOrTool.md) |
+| [has_training_resource](has_training_resource.md) | *
[DataStandardOrTool](DataStandardOrTool.md) | Relevant training resources, standard usage manuals, or other documentation f... | [DataStandardOrTool](DataStandardOrTool.md) |
| [purpose_detail](purpose_detail.md) | 0..1
[String](String.md) | Text description of the standard or tool | [DataStandardOrTool](DataStandardOrTool.md) |
| [is_open](is_open.md) | 0..1
[Boolean](Boolean.md) | Is the standard or tool FAIR and available free of cost? | [DataStandardOrTool](DataStandardOrTool.md) |
-| [requires_registration](requires_registration.md) | 0..1
[Boolean](Boolean.md) | Does usage of the standard or tool require registrion of a user or group with... | [DataStandardOrTool](DataStandardOrTool.md) |
+| [requires_registration](requires_registration.md) | 0..1
[Boolean](Boolean.md) | Does usage of the standard or tool require registration of a user or group wi... | [DataStandardOrTool](DataStandardOrTool.md) |
| [url](url.md) | 0..1
[Uriorcurie](Uriorcurie.md) | URL for basic documentation of the standard or tool | [DataStandardOrTool](DataStandardOrTool.md) |
| [publication](publication.md) | 0..1
[Uriorcurie](Uriorcurie.md) | Relevant publication for the standard or tool | [DataStandardOrTool](DataStandardOrTool.md) |
| [formal_specification](formal_specification.md) | 0..1
[Uriorcurie](Uriorcurie.md) | Relevant code repository or other location for a formal specification of the ... | [DataStandardOrTool](DataStandardOrTool.md) |
| [not_relevant_to_dgps](not_relevant_to_dgps.md) | 0..1
[Boolean](Boolean.md) | Is the standard or tool currently relevant to DGPs? | [DataStandardOrTool](DataStandardOrTool.md) |
-| [id](id.md) | 1..1
[Uriorcurie](Uriorcurie.md) | A unique identifier for a thing | [NamedThing](NamedThing.md) |
+| [id](id.md) | 1
[Uriorcurie](Uriorcurie.md) | A unique identifier for a thing | [NamedThing](NamedThing.md) |
| [category](category.md) | 0..1
[CategoryType](CategoryType.md) | Name of the high level ontology class in which this entity is categorized | [NamedThing](NamedThing.md) |
| [name](name.md) | 0..1
[String](String.md) | A human-readable name for a thing | [NamedThing](NamedThing.md) |
| [description](description.md) | 0..1
[String](String.md) | A human-readable description for a thing | [NamedThing](NamedThing.md) |
-| [subclass_of](subclass_of.md) | 0..*
[NamedThing](NamedThing.md) | Holds between two classes where the domain class is a specialization of the r... | [NamedThing](NamedThing.md) |
-| [related_to](related_to.md) | 0..*
[NamedThing](NamedThing.md) | A relationship that is asserted between two named things | [NamedThing](NamedThing.md) |
+| [subclass_of](subclass_of.md) | *
[NamedThing](NamedThing.md) | Holds between two classes where the domain class is a specialization of the r... | [NamedThing](NamedThing.md) |
+| [related_to](related_to.md) | *
[NamedThing](NamedThing.md) | A relationship that is asserted between two named things | [NamedThing](NamedThing.md) |
| [contributor_name](contributor_name.md) | 0..1
[String](String.md) | The name of the person who added this node | [NamedThing](NamedThing.md) |
| [contributor_github_name](contributor_github_name.md) | 0..1
[String](String.md) | The name of the github user who added this node | [NamedThing](NamedThing.md) |
| [contributor_orcid](contributor_orcid.md) | 0..1
[Uriorcurie](Uriorcurie.md) | The ORCiD of the person who added this node | [NamedThing](NamedThing.md) |
@@ -126,7 +171,6 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:Registry](https://w3id.or
-
## Mappings
| Mapping Type | Mapped Value |
@@ -138,6 +182,8 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:Registry](https://w3id.or
+
+
## LinkML Source
@@ -150,7 +196,6 @@ name: Registry
description: Represents a resource in the Bridge2AI Standards Registry serving to
curate and/or index other resources.
from_schema: https://w3id.org/bridge2ai/standards-schema-all
-rank: 1000
is_a: DataStandardOrTool
```
@@ -164,7 +209,6 @@ name: Registry
description: Represents a resource in the Bridge2AI Standards Registry serving to
curate and/or index other resources.
from_schema: https://w3id.org/bridge2ai/standards-schema-all
-rank: 1000
is_a: DataStandardOrTool
attributes:
collection:
@@ -174,12 +218,12 @@ attributes:
rank: 1000
is_a: node_property
domain: NamedThing
- multivalued: true
alias: collection
owner: Registry
domain_of:
- DataStandardOrTool
range: StandardsCollectionTag
+ multivalued: true
concerns_data_topic:
name: concerns_data_topic
description: Subject standard is generally applied in the context of object data
@@ -188,13 +232,13 @@ attributes:
rank: 1000
is_a: related_to
domain: DataStandardOrTool
- multivalued: true
inherited: true
alias: concerns_data_topic
owner: Registry
domain_of:
- DataStandardOrTool
range: DataTopic
+ multivalued: true
has_relevant_organization:
name: has_relevant_organization
description: Subject standard is managed or otherwise guided buy the object organization(s).
@@ -202,13 +246,27 @@ attributes:
rank: 1000
is_a: related_to
domain: DataStandardOrTool
- multivalued: true
inherited: true
alias: has_relevant_organization
owner: Registry
domain_of:
- DataStandardOrTool
range: Organization
+ multivalued: true
+ has_training_resource:
+ name: has_training_resource
+ description: Relevant training resources, standard usage manuals, or other documentation
+ for the standard or tool.
+ from_schema: https://w3id.org/bridge2ai/standards-schema-all
+ rank: 1000
+ is_a: node_property
+ domain: NamedThing
+ alias: has_training_resource
+ owner: Registry
+ domain_of:
+ - DataStandardOrTool
+ range: DataStandardOrTool
+ multivalued: true
purpose_detail:
name: purpose_detail
description: Text description of the standard or tool.
@@ -235,8 +293,8 @@ attributes:
range: boolean
requires_registration:
name: requires_registration
- description: Does usage of the standard or tool require registrion of a user or
- group with some organization or managerial body?
+ description: Does usage of the standard or tool require registration of a user
+ or group with some organization or managerial body?
from_schema: https://w3id.org/bridge2ai/standards-schema-all
rank: 1000
is_a: node_property
@@ -358,20 +416,19 @@ attributes:
rank: 1000
is_a: related_to
domain: NamedThing
- multivalued: true
inherited: true
alias: subclass_of
owner: Registry
domain_of:
- NamedThing
range: NamedThing
+ multivalued: true
related_to:
name: related_to
description: A relationship that is asserted between two named things.
from_schema: https://w3id.org/bridge2ai/standards-schema-all
rank: 1000
domain: NamedThing
- multivalued: true
inherited: true
alias: related_to
owner: Registry
@@ -380,6 +437,7 @@ attributes:
- Organization
symmetric: true
range: NamedThing
+ multivalued: true
contributor_name:
name: contributor_name
description: The name of the person who added this node.
diff --git a/docs/RorIdentifier.md b/docs/RorIdentifier.md
index 1283108..689ed03 100644
--- a/docs/RorIdentifier.md
+++ b/docs/RorIdentifier.md
@@ -1,9 +1,12 @@
# Type: RorIdentifier
+
+
_Identifier from Research Organization Registry._
+
URI: [xsd:anyURI](http://www.w3.org/2001/XMLSchema#anyURI)
* [base](https://w3id.org/linkml/base): URIorCURIE
@@ -43,3 +46,13 @@ Instances of this class *should* have identifiers with one of the following pref
+
+## Mappings
+
+| Mapping Type | Mapped Value |
+| --- | --- |
+| self | https://w3id.org/bridge2ai/standards-schema-all/:ror_identifier |
+| native | https://w3id.org/bridge2ai/standards-schema-all/:ror_identifier |
+
+
+
diff --git a/docs/SoftwareOrTool.md b/docs/SoftwareOrTool.md
index 74fc3a8..43d76f7 100644
--- a/docs/SoftwareOrTool.md
+++ b/docs/SoftwareOrTool.md
@@ -1,27 +1,47 @@
+
+
# Class: SoftwareOrTool
+
+
_Represents a piece of software or computational tool in the Bridge2AI Standards Registry._
+
URI: [https://w3id.org/bridge2ai/standards-schema-all/:SoftwareOrTool](https://w3id.org/bridge2ai/standards-schema-all/:SoftwareOrTool)
+
+
+
```mermaid
classDiagram
class SoftwareOrTool
+ click SoftwareOrTool href "../SoftwareOrTool"
DataStandardOrTool <|-- SoftwareOrTool
+ click DataStandardOrTool href "../DataStandardOrTool"
SoftwareOrTool : category
SoftwareOrTool : collection
- SoftwareOrTool ..> StandardsCollectionTag : collection
+
+
+
+ SoftwareOrTool --> "*" StandardsCollectionTag : collection
+ click StandardsCollectionTag href "../StandardsCollectionTag"
+
SoftwareOrTool : concerns_data_topic
- SoftwareOrTool ..> DataTopic : concerns_data_topic
+
+
+
+ SoftwareOrTool --> "*" DataTopic : concerns_data_topic
+ click DataTopic href "../DataTopic"
+
SoftwareOrTool : contribution_date
@@ -37,7 +57,21 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:SoftwareOrTool](https://w
SoftwareOrTool : has_relevant_organization
- SoftwareOrTool ..> Organization : has_relevant_organization
+
+
+
+ SoftwareOrTool --> "*" Organization : has_relevant_organization
+ click Organization href "../Organization"
+
+
+ SoftwareOrTool : has_training_resource
+
+
+
+
+ SoftwareOrTool --> "*" DataStandardOrTool : has_training_resource
+ click DataStandardOrTool href "../DataStandardOrTool"
+
SoftwareOrTool : id
@@ -53,13 +87,23 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:SoftwareOrTool](https://w
SoftwareOrTool : related_to
- SoftwareOrTool ..> NamedThing : related_to
+
+
+
+ SoftwareOrTool --> "*" NamedThing : related_to
+ click NamedThing href "../NamedThing"
+
SoftwareOrTool : requires_registration
SoftwareOrTool : subclass_of
- SoftwareOrTool ..> NamedThing : subclass_of
+
+
+
+ SoftwareOrTool --> "*" NamedThing : subclass_of
+ click NamedThing href "../NamedThing"
+
SoftwareOrTool : url
@@ -81,22 +125,23 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:SoftwareOrTool](https://w
| Name | Cardinality and Range | Description | Inheritance |
| --- | --- | --- | --- |
-| [collection](collection.md) | 0..*
[StandardsCollectionTag](StandardsCollectionTag.md) | Tags for specific sets of standards | [DataStandardOrTool](DataStandardOrTool.md) |
-| [concerns_data_topic](concerns_data_topic.md) | 0..*
[DataTopic](DataTopic.md) | Subject standard is generally applied in the context of object data topic | [DataStandardOrTool](DataStandardOrTool.md) |
-| [has_relevant_organization](has_relevant_organization.md) | 0..*
[Organization](Organization.md) | Subject standard is managed or otherwise guided buy the object organization(s... | [DataStandardOrTool](DataStandardOrTool.md) |
+| [collection](collection.md) | *
[StandardsCollectionTag](StandardsCollectionTag.md) | Tags for specific sets of standards | [DataStandardOrTool](DataStandardOrTool.md) |
+| [concerns_data_topic](concerns_data_topic.md) | *
[DataTopic](DataTopic.md) | Subject standard is generally applied in the context of object data topic | [DataStandardOrTool](DataStandardOrTool.md) |
+| [has_relevant_organization](has_relevant_organization.md) | *
[Organization](Organization.md) | Subject standard is managed or otherwise guided buy the object organization(s... | [DataStandardOrTool](DataStandardOrTool.md) |
+| [has_training_resource](has_training_resource.md) | *
[DataStandardOrTool](DataStandardOrTool.md) | Relevant training resources, standard usage manuals, or other documentation f... | [DataStandardOrTool](DataStandardOrTool.md) |
| [purpose_detail](purpose_detail.md) | 0..1
[String](String.md) | Text description of the standard or tool | [DataStandardOrTool](DataStandardOrTool.md) |
| [is_open](is_open.md) | 0..1
[Boolean](Boolean.md) | Is the standard or tool FAIR and available free of cost? | [DataStandardOrTool](DataStandardOrTool.md) |
-| [requires_registration](requires_registration.md) | 0..1
[Boolean](Boolean.md) | Does usage of the standard or tool require registrion of a user or group with... | [DataStandardOrTool](DataStandardOrTool.md) |
+| [requires_registration](requires_registration.md) | 0..1
[Boolean](Boolean.md) | Does usage of the standard or tool require registration of a user or group wi... | [DataStandardOrTool](DataStandardOrTool.md) |
| [url](url.md) | 0..1
[Uriorcurie](Uriorcurie.md) | URL for basic documentation of the standard or tool | [DataStandardOrTool](DataStandardOrTool.md) |
| [publication](publication.md) | 0..1
[Uriorcurie](Uriorcurie.md) | Relevant publication for the standard or tool | [DataStandardOrTool](DataStandardOrTool.md) |
| [formal_specification](formal_specification.md) | 0..1
[Uriorcurie](Uriorcurie.md) | Relevant code repository or other location for a formal specification of the ... | [DataStandardOrTool](DataStandardOrTool.md) |
| [not_relevant_to_dgps](not_relevant_to_dgps.md) | 0..1
[Boolean](Boolean.md) | Is the standard or tool currently relevant to DGPs? | [DataStandardOrTool](DataStandardOrTool.md) |
-| [id](id.md) | 1..1
[Uriorcurie](Uriorcurie.md) | A unique identifier for a thing | [NamedThing](NamedThing.md) |
+| [id](id.md) | 1
[Uriorcurie](Uriorcurie.md) | A unique identifier for a thing | [NamedThing](NamedThing.md) |
| [category](category.md) | 0..1
[CategoryType](CategoryType.md) | Name of the high level ontology class in which this entity is categorized | [NamedThing](NamedThing.md) |
| [name](name.md) | 0..1
[String](String.md) | A human-readable name for a thing | [NamedThing](NamedThing.md) |
| [description](description.md) | 0..1
[String](String.md) | A human-readable description for a thing | [NamedThing](NamedThing.md) |
-| [subclass_of](subclass_of.md) | 0..*
[NamedThing](NamedThing.md) | Holds between two classes where the domain class is a specialization of the r... | [NamedThing](NamedThing.md) |
-| [related_to](related_to.md) | 0..*
[NamedThing](NamedThing.md) | A relationship that is asserted between two named things | [NamedThing](NamedThing.md) |
+| [subclass_of](subclass_of.md) | *
[NamedThing](NamedThing.md) | Holds between two classes where the domain class is a specialization of the r... | [NamedThing](NamedThing.md) |
+| [related_to](related_to.md) | *
[NamedThing](NamedThing.md) | A relationship that is asserted between two named things | [NamedThing](NamedThing.md) |
| [contributor_name](contributor_name.md) | 0..1
[String](String.md) | The name of the person who added this node | [NamedThing](NamedThing.md) |
| [contributor_github_name](contributor_github_name.md) | 0..1
[String](String.md) | The name of the github user who added this node | [NamedThing](NamedThing.md) |
| [contributor_orcid](contributor_orcid.md) | 0..1
[Uriorcurie](Uriorcurie.md) | The ORCiD of the person who added this node | [NamedThing](NamedThing.md) |
@@ -126,7 +171,6 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:SoftwareOrTool](https://w
-
## Mappings
| Mapping Type | Mapped Value |
@@ -138,6 +182,8 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:SoftwareOrTool](https://w
+
+
## LinkML Source
@@ -150,7 +196,6 @@ name: SoftwareOrTool
description: Represents a piece of software or computational tool in the Bridge2AI
Standards Registry.
from_schema: https://w3id.org/bridge2ai/standards-schema-all
-rank: 1000
is_a: DataStandardOrTool
```
@@ -164,7 +209,6 @@ name: SoftwareOrTool
description: Represents a piece of software or computational tool in the Bridge2AI
Standards Registry.
from_schema: https://w3id.org/bridge2ai/standards-schema-all
-rank: 1000
is_a: DataStandardOrTool
attributes:
collection:
@@ -174,12 +218,12 @@ attributes:
rank: 1000
is_a: node_property
domain: NamedThing
- multivalued: true
alias: collection
owner: SoftwareOrTool
domain_of:
- DataStandardOrTool
range: StandardsCollectionTag
+ multivalued: true
concerns_data_topic:
name: concerns_data_topic
description: Subject standard is generally applied in the context of object data
@@ -188,13 +232,13 @@ attributes:
rank: 1000
is_a: related_to
domain: DataStandardOrTool
- multivalued: true
inherited: true
alias: concerns_data_topic
owner: SoftwareOrTool
domain_of:
- DataStandardOrTool
range: DataTopic
+ multivalued: true
has_relevant_organization:
name: has_relevant_organization
description: Subject standard is managed or otherwise guided buy the object organization(s).
@@ -202,13 +246,27 @@ attributes:
rank: 1000
is_a: related_to
domain: DataStandardOrTool
- multivalued: true
inherited: true
alias: has_relevant_organization
owner: SoftwareOrTool
domain_of:
- DataStandardOrTool
range: Organization
+ multivalued: true
+ has_training_resource:
+ name: has_training_resource
+ description: Relevant training resources, standard usage manuals, or other documentation
+ for the standard or tool.
+ from_schema: https://w3id.org/bridge2ai/standards-schema-all
+ rank: 1000
+ is_a: node_property
+ domain: NamedThing
+ alias: has_training_resource
+ owner: SoftwareOrTool
+ domain_of:
+ - DataStandardOrTool
+ range: DataStandardOrTool
+ multivalued: true
purpose_detail:
name: purpose_detail
description: Text description of the standard or tool.
@@ -235,8 +293,8 @@ attributes:
range: boolean
requires_registration:
name: requires_registration
- description: Does usage of the standard or tool require registrion of a user or
- group with some organization or managerial body?
+ description: Does usage of the standard or tool require registration of a user
+ or group with some organization or managerial body?
from_schema: https://w3id.org/bridge2ai/standards-schema-all
rank: 1000
is_a: node_property
@@ -358,20 +416,19 @@ attributes:
rank: 1000
is_a: related_to
domain: NamedThing
- multivalued: true
inherited: true
alias: subclass_of
owner: SoftwareOrTool
domain_of:
- NamedThing
range: NamedThing
+ multivalued: true
related_to:
name: related_to
description: A relationship that is asserted between two named things.
from_schema: https://w3id.org/bridge2ai/standards-schema-all
rank: 1000
domain: NamedThing
- multivalued: true
inherited: true
alias: related_to
owner: SoftwareOrTool
@@ -380,6 +437,7 @@ attributes:
- Organization
symmetric: true
range: NamedThing
+ multivalued: true
contributor_name:
name: contributor_name
description: The name of the person who added this node.
diff --git a/docs/Sparqlpath.md b/docs/Sparqlpath.md
new file mode 100644
index 0000000..914293d
--- /dev/null
+++ b/docs/Sparqlpath.md
@@ -0,0 +1,49 @@
+# Type: Sparqlpath
+
+
+
+
+_A string encoding a SPARQL Property Path. The value of the string MUST conform to SPARQL syntax and SHOULD dereference to zero or more valid objects within the current instance document when encoded as RDF._
+
+
+
+URI: [xsd:string](http://www.w3.org/2001/XMLSchema#string)
+
+* [base](https://w3id.org/linkml/base): str
+
+* [uri](https://w3id.org/linkml/uri): xsd:string
+
+* [repr](https://w3id.org/linkml/repr): str
+
+
+
+
+
+
+
+
+## Identifier and Mapping Information
+
+
+
+
+
+
+
+### Schema Source
+
+
+* from schema: https://w3id.org/bridge2ai/standards-schema-all
+
+
+
+
+## Mappings
+
+| Mapping Type | Mapped Value |
+| --- | --- |
+| self | xsd:string |
+| native | https://w3id.org/bridge2ai/standards-schema-all/:sparqlpath |
+
+
+
diff --git a/docs/StandardsCollectionTag.md b/docs/StandardsCollectionTag.md
index 7b2be91..fbc63dc 100644
--- a/docs/StandardsCollectionTag.md
+++ b/docs/StandardsCollectionTag.md
@@ -1,10 +1,13 @@
# Enum: StandardsCollectionTag
+
+
_Tags for specific sets of standards._
-URI: [StandardsCollectionTag](StandardsCollectionTag)
+
+URI: [StandardsCollectionTag](StandardsCollectionTag.md)
## Permissible Values
@@ -76,6 +79,8 @@ URI: [StandardsCollectionTag](StandardsCollectionTag)
+
+
## LinkML Source
diff --git a/docs/String.md b/docs/String.md
index d01dfcf..48fea39 100644
--- a/docs/String.md
+++ b/docs/String.md
@@ -1,9 +1,12 @@
# Type: String
+
+
_A character string_
+
URI: [xsd:string](http://www.w3.org/2001/XMLSchema#string)
* [base](https://w3id.org/linkml/base): str
@@ -33,3 +36,14 @@ URI: [xsd:string](http://www.w3.org/2001/XMLSchema#string)
+
+## Mappings
+
+| Mapping Type | Mapped Value |
+| --- | --- |
+| self | xsd:string |
+| native | https://w3id.org/bridge2ai/standards-schema-all/:string |
+| exact | schema:Text |
+
+
+
diff --git a/docs/Time.md b/docs/Time.md
index 597e771..1f03378 100644
--- a/docs/Time.md
+++ b/docs/Time.md
@@ -1,14 +1,17 @@
# Type: Time
+
+
_A time object represents a (local) time of day, independent of any particular day_
-URI: [xsd:dateTime](http://www.w3.org/2001/XMLSchema#dateTime)
+
+URI: [xsd:time](http://www.w3.org/2001/XMLSchema#time)
* [base](https://w3id.org/linkml/base): XSDTime
-* [uri](https://w3id.org/linkml/uri): xsd:dateTime
+* [uri](https://w3id.org/linkml/uri): xsd:time
* [repr](https://w3id.org/linkml/repr): str
@@ -34,3 +37,14 @@ URI: [xsd:dateTime](http://www.w3.org/2001/XMLSchema#dateTime)
+
+## Mappings
+
+| Mapping Type | Mapped Value |
+| --- | --- |
+| self | xsd:time |
+| native | https://w3id.org/bridge2ai/standards-schema-all/:time |
+| exact | schema:Time |
+
+
+
diff --git a/docs/TrainingProgram.md b/docs/TrainingProgram.md
index 01db45b..88d912e 100644
--- a/docs/TrainingProgram.md
+++ b/docs/TrainingProgram.md
@@ -1,27 +1,47 @@
+
+
# Class: TrainingProgram
+
+
_Represents a training program for skills and experience related to standards or tools in the Bridge2AI Standards Registry._
+
URI: [https://w3id.org/bridge2ai/standards-schema-all/:TrainingProgram](https://w3id.org/bridge2ai/standards-schema-all/:TrainingProgram)
+
+
+
```mermaid
classDiagram
class TrainingProgram
+ click TrainingProgram href "../TrainingProgram"
DataStandardOrTool <|-- TrainingProgram
+ click DataStandardOrTool href "../DataStandardOrTool"
TrainingProgram : category
TrainingProgram : collection
- TrainingProgram ..> StandardsCollectionTag : collection
+
+
+
+ TrainingProgram --> "*" StandardsCollectionTag : collection
+ click StandardsCollectionTag href "../StandardsCollectionTag"
+
TrainingProgram : concerns_data_topic
- TrainingProgram ..> DataTopic : concerns_data_topic
+
+
+
+ TrainingProgram --> "*" DataTopic : concerns_data_topic
+ click DataTopic href "../DataTopic"
+
TrainingProgram : contribution_date
@@ -37,7 +57,21 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:TrainingProgram](https://
TrainingProgram : has_relevant_organization
- TrainingProgram ..> Organization : has_relevant_organization
+
+
+
+ TrainingProgram --> "*" Organization : has_relevant_organization
+ click Organization href "../Organization"
+
+
+ TrainingProgram : has_training_resource
+
+
+
+
+ TrainingProgram --> "*" DataStandardOrTool : has_training_resource
+ click DataStandardOrTool href "../DataStandardOrTool"
+
TrainingProgram : id
@@ -53,13 +87,23 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:TrainingProgram](https://
TrainingProgram : related_to
- TrainingProgram ..> NamedThing : related_to
+
+
+
+ TrainingProgram --> "*" NamedThing : related_to
+ click NamedThing href "../NamedThing"
+
TrainingProgram : requires_registration
TrainingProgram : subclass_of
- TrainingProgram ..> NamedThing : subclass_of
+
+
+
+ TrainingProgram --> "*" NamedThing : subclass_of
+ click NamedThing href "../NamedThing"
+
TrainingProgram : url
@@ -81,22 +125,23 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:TrainingProgram](https://
| Name | Cardinality and Range | Description | Inheritance |
| --- | --- | --- | --- |
-| [collection](collection.md) | 0..*
[StandardsCollectionTag](StandardsCollectionTag.md) | Tags for specific sets of standards | [DataStandardOrTool](DataStandardOrTool.md) |
-| [concerns_data_topic](concerns_data_topic.md) | 0..*
[DataTopic](DataTopic.md) | Subject standard is generally applied in the context of object data topic | [DataStandardOrTool](DataStandardOrTool.md) |
-| [has_relevant_organization](has_relevant_organization.md) | 0..*
[Organization](Organization.md) | Subject standard is managed or otherwise guided buy the object organization(s... | [DataStandardOrTool](DataStandardOrTool.md) |
+| [collection](collection.md) | *
[StandardsCollectionTag](StandardsCollectionTag.md) | Tags for specific sets of standards | [DataStandardOrTool](DataStandardOrTool.md) |
+| [concerns_data_topic](concerns_data_topic.md) | *
[DataTopic](DataTopic.md) | Subject standard is generally applied in the context of object data topic | [DataStandardOrTool](DataStandardOrTool.md) |
+| [has_relevant_organization](has_relevant_organization.md) | *
[Organization](Organization.md) | Subject standard is managed or otherwise guided buy the object organization(s... | [DataStandardOrTool](DataStandardOrTool.md) |
+| [has_training_resource](has_training_resource.md) | *
[DataStandardOrTool](DataStandardOrTool.md) | Relevant training resources, standard usage manuals, or other documentation f... | [DataStandardOrTool](DataStandardOrTool.md) |
| [purpose_detail](purpose_detail.md) | 0..1
[String](String.md) | Text description of the standard or tool | [DataStandardOrTool](DataStandardOrTool.md) |
| [is_open](is_open.md) | 0..1
[Boolean](Boolean.md) | Is the standard or tool FAIR and available free of cost? | [DataStandardOrTool](DataStandardOrTool.md) |
-| [requires_registration](requires_registration.md) | 0..1
[Boolean](Boolean.md) | Does usage of the standard or tool require registrion of a user or group with... | [DataStandardOrTool](DataStandardOrTool.md) |
+| [requires_registration](requires_registration.md) | 0..1
[Boolean](Boolean.md) | Does usage of the standard or tool require registration of a user or group wi... | [DataStandardOrTool](DataStandardOrTool.md) |
| [url](url.md) | 0..1
[Uriorcurie](Uriorcurie.md) | URL for basic documentation of the standard or tool | [DataStandardOrTool](DataStandardOrTool.md) |
| [publication](publication.md) | 0..1
[Uriorcurie](Uriorcurie.md) | Relevant publication for the standard or tool | [DataStandardOrTool](DataStandardOrTool.md) |
| [formal_specification](formal_specification.md) | 0..1
[Uriorcurie](Uriorcurie.md) | Relevant code repository or other location for a formal specification of the ... | [DataStandardOrTool](DataStandardOrTool.md) |
| [not_relevant_to_dgps](not_relevant_to_dgps.md) | 0..1
[Boolean](Boolean.md) | Is the standard or tool currently relevant to DGPs? | [DataStandardOrTool](DataStandardOrTool.md) |
-| [id](id.md) | 1..1
[Uriorcurie](Uriorcurie.md) | A unique identifier for a thing | [NamedThing](NamedThing.md) |
+| [id](id.md) | 1
[Uriorcurie](Uriorcurie.md) | A unique identifier for a thing | [NamedThing](NamedThing.md) |
| [category](category.md) | 0..1
[CategoryType](CategoryType.md) | Name of the high level ontology class in which this entity is categorized | [NamedThing](NamedThing.md) |
| [name](name.md) | 0..1
[String](String.md) | A human-readable name for a thing | [NamedThing](NamedThing.md) |
| [description](description.md) | 0..1
[String](String.md) | A human-readable description for a thing | [NamedThing](NamedThing.md) |
-| [subclass_of](subclass_of.md) | 0..*
[NamedThing](NamedThing.md) | Holds between two classes where the domain class is a specialization of the r... | [NamedThing](NamedThing.md) |
-| [related_to](related_to.md) | 0..*
[NamedThing](NamedThing.md) | A relationship that is asserted between two named things | [NamedThing](NamedThing.md) |
+| [subclass_of](subclass_of.md) | *
[NamedThing](NamedThing.md) | Holds between two classes where the domain class is a specialization of the r... | [NamedThing](NamedThing.md) |
+| [related_to](related_to.md) | *
[NamedThing](NamedThing.md) | A relationship that is asserted between two named things | [NamedThing](NamedThing.md) |
| [contributor_name](contributor_name.md) | 0..1
[String](String.md) | The name of the person who added this node | [NamedThing](NamedThing.md) |
| [contributor_github_name](contributor_github_name.md) | 0..1
[String](String.md) | The name of the github user who added this node | [NamedThing](NamedThing.md) |
| [contributor_orcid](contributor_orcid.md) | 0..1
[Uriorcurie](Uriorcurie.md) | The ORCiD of the person who added this node | [NamedThing](NamedThing.md) |
@@ -126,7 +171,6 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:TrainingProgram](https://
-
## Mappings
| Mapping Type | Mapped Value |
@@ -138,6 +182,8 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:TrainingProgram](https://
+
+
## LinkML Source
@@ -150,7 +196,6 @@ name: TrainingProgram
description: Represents a training program for skills and experience related to standards
or tools in the Bridge2AI Standards Registry.
from_schema: https://w3id.org/bridge2ai/standards-schema-all
-rank: 1000
is_a: DataStandardOrTool
```
@@ -164,7 +209,6 @@ name: TrainingProgram
description: Represents a training program for skills and experience related to standards
or tools in the Bridge2AI Standards Registry.
from_schema: https://w3id.org/bridge2ai/standards-schema-all
-rank: 1000
is_a: DataStandardOrTool
attributes:
collection:
@@ -174,12 +218,12 @@ attributes:
rank: 1000
is_a: node_property
domain: NamedThing
- multivalued: true
alias: collection
owner: TrainingProgram
domain_of:
- DataStandardOrTool
range: StandardsCollectionTag
+ multivalued: true
concerns_data_topic:
name: concerns_data_topic
description: Subject standard is generally applied in the context of object data
@@ -188,13 +232,13 @@ attributes:
rank: 1000
is_a: related_to
domain: DataStandardOrTool
- multivalued: true
inherited: true
alias: concerns_data_topic
owner: TrainingProgram
domain_of:
- DataStandardOrTool
range: DataTopic
+ multivalued: true
has_relevant_organization:
name: has_relevant_organization
description: Subject standard is managed or otherwise guided buy the object organization(s).
@@ -202,13 +246,27 @@ attributes:
rank: 1000
is_a: related_to
domain: DataStandardOrTool
- multivalued: true
inherited: true
alias: has_relevant_organization
owner: TrainingProgram
domain_of:
- DataStandardOrTool
range: Organization
+ multivalued: true
+ has_training_resource:
+ name: has_training_resource
+ description: Relevant training resources, standard usage manuals, or other documentation
+ for the standard or tool.
+ from_schema: https://w3id.org/bridge2ai/standards-schema-all
+ rank: 1000
+ is_a: node_property
+ domain: NamedThing
+ alias: has_training_resource
+ owner: TrainingProgram
+ domain_of:
+ - DataStandardOrTool
+ range: DataStandardOrTool
+ multivalued: true
purpose_detail:
name: purpose_detail
description: Text description of the standard or tool.
@@ -235,8 +293,8 @@ attributes:
range: boolean
requires_registration:
name: requires_registration
- description: Does usage of the standard or tool require registrion of a user or
- group with some organization or managerial body?
+ description: Does usage of the standard or tool require registration of a user
+ or group with some organization or managerial body?
from_schema: https://w3id.org/bridge2ai/standards-schema-all
rank: 1000
is_a: node_property
@@ -358,20 +416,19 @@ attributes:
rank: 1000
is_a: related_to
domain: NamedThing
- multivalued: true
inherited: true
alias: subclass_of
owner: TrainingProgram
domain_of:
- NamedThing
range: NamedThing
+ multivalued: true
related_to:
name: related_to
description: A relationship that is asserted between two named things.
from_schema: https://w3id.org/bridge2ai/standards-schema-all
rank: 1000
domain: NamedThing
- multivalued: true
inherited: true
alias: related_to
owner: TrainingProgram
@@ -380,6 +437,7 @@ attributes:
- Organization
symmetric: true
range: NamedThing
+ multivalued: true
contributor_name:
name: contributor_name
description: The name of the person who added this node.
diff --git a/docs/Uri.md b/docs/Uri.md
index 7853307..81593ca 100644
--- a/docs/Uri.md
+++ b/docs/Uri.md
@@ -1,9 +1,12 @@
# Type: Uri
+
+
_a complete URI_
+
URI: [xsd:anyURI](http://www.w3.org/2001/XMLSchema#anyURI)
* [base](https://w3id.org/linkml/base): URI
@@ -38,3 +41,14 @@ URI: [xsd:anyURI](http://www.w3.org/2001/XMLSchema#anyURI)
+
+## Mappings
+
+| Mapping Type | Mapped Value |
+| --- | --- |
+| self | xsd:anyURI |
+| native | https://w3id.org/bridge2ai/standards-schema-all/:uri |
+| close | schema:URL |
+
+
+
diff --git a/docs/Uriorcurie.md b/docs/Uriorcurie.md
index cad4d78..bf14f0c 100644
--- a/docs/Uriorcurie.md
+++ b/docs/Uriorcurie.md
@@ -1,9 +1,12 @@
# Type: Uriorcurie
+
+
_a URI or a CURIE_
+
URI: [xsd:anyURI](http://www.w3.org/2001/XMLSchema#anyURI)
* [base](https://w3id.org/linkml/base): URIorCURIE
@@ -34,3 +37,13 @@ URI: [xsd:anyURI](http://www.w3.org/2001/XMLSchema#anyURI)
+
+## Mappings
+
+| Mapping Type | Mapped Value |
+| --- | --- |
+| self | xsd:anyURI |
+| native | https://w3id.org/bridge2ai/standards-schema-all/:uriorcurie |
+
+
+
diff --git a/docs/UseCase.md b/docs/UseCase.md
index 9bae4e8..5140f80 100644
--- a/docs/UseCase.md
+++ b/docs/UseCase.md
@@ -1,21 +1,36 @@
+
+
# Class: UseCase
+
+
_Represents a use case for Bridge2AI standards._
+
URI: [https://w3id.org/bridge2ai/standards-schema-all/:UseCase](https://w3id.org/bridge2ai/standards-schema-all/:UseCase)
+
+
+
```mermaid
classDiagram
class UseCase
+ click UseCase href "../UseCase"
NamedThing <|-- UseCase
+ click NamedThing href "../NamedThing"
UseCase : alternative_standards_and_tools
- UseCase ..> DataStandardOrTool : alternative_standards_and_tools
+
+
+
+ UseCase --> "*" DataStandardOrTool : alternative_standards_and_tools
+ click DataStandardOrTool href "../DataStandardOrTool"
+
UseCase : category
@@ -29,17 +44,32 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:UseCase](https://w3id.org
UseCase : data_substrates
- UseCase ..> DataSubstrate : data_substrates
+
+
+
+ UseCase --> "*" DataSubstrate : data_substrates
+ click DataSubstrate href "../DataSubstrate"
+
UseCase : data_topics
- UseCase ..> DataTopic : data_topics
+
+
+
+ UseCase --> "*" DataTopic : data_topics
+ click DataTopic href "../DataTopic"
+
UseCase : description
UseCase : enables
- UseCase ..> UseCase : enables
+
+
+
+ UseCase --> "*" UseCase : enables
+ click UseCase href "../UseCase"
+
UseCase : id
@@ -55,23 +85,48 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:UseCase](https://w3id.org
UseCase : related_to
- UseCase ..> NamedThing : related_to
+
+
+
+ UseCase --> "*" NamedThing : related_to
+ click NamedThing href "../NamedThing"
+
UseCase : relevance_to_dgps
- UseCase ..> DataGeneratingProject : relevance_to_dgps
+
+
+
+ UseCase --> "*" DataGeneratingProject : relevance_to_dgps
+ click DataGeneratingProject href "../DataGeneratingProject"
+
UseCase : standards_and_tools_for_dgp_use
- UseCase ..> DataStandardOrTool : standards_and_tools_for_dgp_use
+
+
+
+ UseCase --> "*" DataStandardOrTool : standards_and_tools_for_dgp_use
+ click DataStandardOrTool href "../DataStandardOrTool"
+
UseCase : subclass_of
- UseCase ..> NamedThing : subclass_of
+
+
+
+ UseCase --> "*" NamedThing : subclass_of
+ click NamedThing href "../NamedThing"
+
UseCase : use_case_category
- UseCase ..> UseCaseCategory : use_case_category
+
+
+
+ UseCase --> "1" UseCaseCategory : use_case_category
+ click UseCaseCategory href "../UseCaseCategory"
+
UseCase : xref
@@ -92,24 +147,24 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:UseCase](https://w3id.org
| Name | Cardinality and Range | Description | Inheritance |
| --- | --- | --- | --- |
-| [use_case_category](use_case_category.md) | 0..1
[UseCaseCategory](UseCaseCategory.md) | Category of the UseCase | direct |
+| [use_case_category](use_case_category.md) | 1
[UseCaseCategory](UseCaseCategory.md) | Category of the UseCase | direct |
| [known_limitations](known_limitations.md) | 0..1
[String](String.md) | Any current obstacles to implementing this use case | direct |
-| [relevance_to_dgps](relevance_to_dgps.md) | 0..*
[DataGeneratingProject](DataGeneratingProject.md) | Relevance of the use case to one or more DGPs | direct |
-| [data_topics](data_topics.md) | 0..*
[DataTopic](DataTopic.md) | Relevance of the use case to one or more data topics | direct |
-| [data_substrates](data_substrates.md) | 0..*
[DataSubstrate](DataSubstrate.md) | Relevance of the use case to one or more data substrates | direct |
-| [standards_and_tools_for_dgp_use](standards_and_tools_for_dgp_use.md) | 0..*
[DataStandardOrTool](DataStandardOrTool.md) | List of identifiers of standards and tools; those planned to be used, or alre... | direct |
-| [alternative_standards_and_tools](alternative_standards_and_tools.md) | 0..*
[DataStandardOrTool](DataStandardOrTool.md) | List of identifiers of standards and tools; those not explicitly planned to b... | direct |
-| [enables](enables.md) | 0..*
[UseCase](UseCase.md) | Other use case(s) this use case supports or makes possible | direct |
+| [relevance_to_dgps](relevance_to_dgps.md) | *
[DataGeneratingProject](DataGeneratingProject.md) | Relevance of the use case to one or more DGPs | direct |
+| [data_topics](data_topics.md) | *
[DataTopic](DataTopic.md) | Relevance of the use case to one or more data topics | direct |
+| [data_substrates](data_substrates.md) | *
[DataSubstrate](DataSubstrate.md) | Relevance of the use case to one or more data substrates | direct |
+| [standards_and_tools_for_dgp_use](standards_and_tools_for_dgp_use.md) | *
[DataStandardOrTool](DataStandardOrTool.md) | List of identifiers of standards and tools; those planned to be used, or alre... | direct |
+| [alternative_standards_and_tools](alternative_standards_and_tools.md) | *
[DataStandardOrTool](DataStandardOrTool.md) | List of identifiers of standards and tools; those not explicitly planned to b... | direct |
+| [enables](enables.md) | *
[UseCase](UseCase.md) | Other use case(s) this use case supports or makes possible | direct |
| [involved_in_experimental_design](involved_in_experimental_design.md) | 0..1
[Boolean](Boolean.md) | True if use case is likely to be implemented as part of an experimental proce... | direct |
| [involved_in_metadata_management](involved_in_metadata_management.md) | 0..1
[Boolean](Boolean.md) | True if use case is likely to be implemented as part of metadata indexing, sa... | direct |
| [involved_in_quality_control](involved_in_quality_control.md) | 0..1
[Boolean](Boolean.md) | True is use case is likely to be implemented as part of data validation opera... | direct |
-| [xref](xref.md) | 0..*
[Uriorcurie](Uriorcurie.md) | URI of corresponding class in an ontology of experimental procedures, in CURI... | direct |
-| [id](id.md) | 1..1
[Uriorcurie](Uriorcurie.md) | A unique identifier for a thing | [NamedThing](NamedThing.md) |
+| [xref](xref.md) | *
[Uriorcurie](Uriorcurie.md) | URI of corresponding class in an ontology of experimental procedures, in CURI... | direct |
+| [id](id.md) | 1
[Uriorcurie](Uriorcurie.md) | A unique identifier for a thing | [NamedThing](NamedThing.md) |
| [category](category.md) | 0..1
[CategoryType](CategoryType.md) | Name of the high level ontology class in which this entity is categorized | [NamedThing](NamedThing.md) |
| [name](name.md) | 0..1
[String](String.md) | A human-readable name for a thing | [NamedThing](NamedThing.md) |
| [description](description.md) | 0..1
[String](String.md) | A human-readable description for a thing | [NamedThing](NamedThing.md) |
-| [subclass_of](subclass_of.md) | 0..*
[NamedThing](NamedThing.md) | Holds between two classes where the domain class is a specialization of the r... | [NamedThing](NamedThing.md) |
-| [related_to](related_to.md) | 0..*
[NamedThing](NamedThing.md) | A relationship that is asserted between two named things | [NamedThing](NamedThing.md) |
+| [subclass_of](subclass_of.md) | *
[NamedThing](NamedThing.md) | Holds between two classes where the domain class is a specialization of the r... | [NamedThing](NamedThing.md) |
+| [related_to](related_to.md) | *
[NamedThing](NamedThing.md) | A relationship that is asserted between two named things | [NamedThing](NamedThing.md) |
| [contributor_name](contributor_name.md) | 0..1
[String](String.md) | The name of the person who added this node | [NamedThing](NamedThing.md) |
| [contributor_github_name](contributor_github_name.md) | 0..1
[String](String.md) | The name of the github user who added this node | [NamedThing](NamedThing.md) |
| [contributor_orcid](contributor_orcid.md) | 0..1
[Uriorcurie](Uriorcurie.md) | The ORCiD of the person who added this node | [NamedThing](NamedThing.md) |
@@ -147,7 +202,6 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:UseCase](https://w3id.org
-
## Mappings
| Mapping Type | Mapped Value |
@@ -159,6 +213,8 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:UseCase](https://w3id.org
+
+
## LinkML Source
@@ -170,7 +226,6 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:UseCase](https://w3id.org
name: UseCase
description: Represents a use case for Bridge2AI standards.
from_schema: https://w3id.org/bridge2ai/standards-schema-all
-rank: 1000
is_a: NamedThing
slots:
- use_case_category
@@ -188,8 +243,6 @@ slots:
slot_usage:
use_case_category:
name: use_case_category
- domain_of:
- - UseCase
required: true
```
@@ -202,13 +255,10 @@ slot_usage:
name: UseCase
description: Represents a use case for Bridge2AI standards.
from_schema: https://w3id.org/bridge2ai/standards-schema-all
-rank: 1000
is_a: NamedThing
slot_usage:
use_case_category:
name: use_case_category
- domain_of:
- - UseCase
required: true
attributes:
use_case_category:
@@ -244,12 +294,12 @@ attributes:
description: Relevance of the use case to one or more DGPs.
from_schema: https://w3id.org/bridge2ai/standards-schema-all
rank: 1000
- multivalued: true
alias: relevance_to_dgps
owner: UseCase
domain_of:
- UseCase
range: DataGeneratingProject
+ multivalued: true
data_topics:
name: data_topics
description: Relevance of the use case to one or more data topics.
@@ -257,12 +307,12 @@ attributes:
rank: 1000
is_a: node_property
domain: NamedThing
- multivalued: true
alias: data_topics
owner: UseCase
domain_of:
- UseCase
range: DataTopic
+ multivalued: true
data_substrates:
name: data_substrates
description: Relevance of the use case to one or more data substrates.
@@ -270,12 +320,12 @@ attributes:
rank: 1000
is_a: node_property
domain: NamedThing
- multivalued: true
alias: data_substrates
owner: UseCase
domain_of:
- UseCase
range: DataSubstrate
+ multivalued: true
standards_and_tools_for_dgp_use:
name: standards_and_tools_for_dgp_use
description: List of identifiers of standards and tools; those planned to be used,
@@ -286,12 +336,12 @@ attributes:
rank: 1000
is_a: node_property
domain: NamedThing
- multivalued: true
alias: standards_and_tools_for_dgp_use
owner: UseCase
domain_of:
- UseCase
range: DataStandardOrTool
+ multivalued: true
alternative_standards_and_tools:
name: alternative_standards_and_tools
description: List of identifiers of standards and tools; those not explicitly
@@ -301,12 +351,12 @@ attributes:
rank: 1000
is_a: node_property
domain: NamedThing
- multivalued: true
alias: alternative_standards_and_tools
owner: UseCase
domain_of:
- UseCase
range: DataStandardOrTool
+ multivalued: true
enables:
name: enables
description: Other use case(s) this use case supports or makes possible.
@@ -314,12 +364,12 @@ attributes:
rank: 1000
is_a: node_property
domain: NamedThing
- multivalued: true
alias: enables
owner: UseCase
domain_of:
- UseCase
range: UseCase
+ multivalued: true
involved_in_experimental_design:
name: involved_in_experimental_design
description: True if use case is likely to be implemented as part of an experimental
@@ -372,12 +422,12 @@ attributes:
rank: 1000
is_a: node_property
domain: NamedThing
- multivalued: true
alias: xref
owner: UseCase
domain_of:
- UseCase
range: uriorcurie
+ multivalued: true
id:
name: id
description: A unique identifier for a thing.
@@ -440,20 +490,19 @@ attributes:
rank: 1000
is_a: related_to
domain: NamedThing
- multivalued: true
inherited: true
alias: subclass_of
owner: UseCase
domain_of:
- NamedThing
range: NamedThing
+ multivalued: true
related_to:
name: related_to
description: A relationship that is asserted between two named things.
from_schema: https://w3id.org/bridge2ai/standards-schema-all
rank: 1000
domain: NamedThing
- multivalued: true
inherited: true
alias: related_to
owner: UseCase
@@ -462,6 +511,7 @@ attributes:
- Organization
symmetric: true
range: NamedThing
+ multivalued: true
contributor_name:
name: contributor_name
description: The name of the person who added this node.
diff --git a/docs/UseCaseCategory.md b/docs/UseCaseCategory.md
index 2a9fbea..3046049 100644
--- a/docs/UseCaseCategory.md
+++ b/docs/UseCaseCategory.md
@@ -1,10 +1,13 @@
# Enum: UseCaseCategory
+
+
_Category of use case._
-URI: [UseCaseCategory](UseCaseCategory)
+
+URI: [UseCaseCategory](UseCaseCategory.md)
## Permissible Values
@@ -47,6 +50,8 @@ URI: [UseCaseCategory](UseCaseCategory)
+
+
## LinkML Source
diff --git a/docs/UseCaseContainer.md b/docs/UseCaseContainer.md
index c311412..1f4a8e4 100644
--- a/docs/UseCaseContainer.md
+++ b/docs/UseCaseContainer.md
@@ -1,19 +1,33 @@
+
+
# Class: UseCaseContainer
+
+
_A container for UseCase._
+
URI: [https://w3id.org/bridge2ai/standards-schema-all/:UseCaseContainer](https://w3id.org/bridge2ai/standards-schema-all/:UseCaseContainer)
+
+
+
```mermaid
classDiagram
class UseCaseContainer
+ click UseCaseContainer href "../UseCaseContainer"
UseCaseContainer : use_cases
- UseCaseContainer ..> UseCase : use_cases
+
+
+
+ UseCaseContainer --> "*" UseCase : use_cases
+ click UseCase href "../UseCase"
+
```
@@ -28,7 +42,7 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:UseCaseContainer](https:/
| Name | Cardinality and Range | Description | Inheritance |
| --- | --- | --- | --- |
-| [use_cases](use_cases.md) | 0..*
[UseCase](UseCase.md) | Collection of associated use cases | direct |
+| [use_cases](use_cases.md) | *
[UseCase](UseCase.md) | Collection of associated use cases | direct |
@@ -54,7 +68,6 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:UseCaseContainer](https:/
-
## Mappings
| Mapping Type | Mapped Value |
@@ -66,6 +79,8 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:UseCaseContainer](https:/
+
+
## LinkML Source
@@ -77,7 +92,6 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:UseCaseContainer](https:/
name: UseCaseContainer
description: A container for UseCase.
from_schema: https://w3id.org/bridge2ai/standards-schema-all
-rank: 1000
slots:
- use_cases
@@ -91,19 +105,18 @@ slots:
name: UseCaseContainer
description: A container for UseCase.
from_schema: https://w3id.org/bridge2ai/standards-schema-all
-rank: 1000
attributes:
use_cases:
name: use_cases
description: Collection of associated use cases
from_schema: https://w3id.org/bridge2ai/standards-schema-all
rank: 1000
- multivalued: true
alias: use_cases
owner: UseCaseContainer
domain_of:
- UseCaseContainer
range: UseCase
+ multivalued: true
inlined: true
inlined_as_list: true
diff --git a/docs/WikidataIdentifier.md b/docs/WikidataIdentifier.md
index 8f4f548..c87349d 100644
--- a/docs/WikidataIdentifier.md
+++ b/docs/WikidataIdentifier.md
@@ -1,9 +1,12 @@
# Type: WikidataIdentifier
+
+
_Identifier from Wikidata open knowledge base._
+
URI: [xsd:anyURI](http://www.w3.org/2001/XMLSchema#anyURI)
* [base](https://w3id.org/linkml/base): URIorCURIE
@@ -43,3 +46,13 @@ Instances of this class *should* have identifiers with one of the following pref
+
+## Mappings
+
+| Mapping Type | Mapped Value |
+| --- | --- |
+| self | https://w3id.org/bridge2ai/standards-schema-all/:wikidata_identifier |
+| native | https://w3id.org/bridge2ai/standards-schema-all/:wikidata_identifier |
+
+
+
diff --git a/docs/alternative_standards_and_tools.md b/docs/alternative_standards_and_tools.md
index 38f2c9c..425894a 100644
--- a/docs/alternative_standards_and_tools.md
+++ b/docs/alternative_standards_and_tools.md
@@ -1,7 +1,14 @@
+
+
# Slot: alternative_standards_and_tools
+
+
_List of identifiers of standards and tools; those not explicitly planned to be used, by one or more Bridge2AI DGPs in addressing this use case but serving as viable alternatives, from those in the Standards Registry._
+
+
+
URI: [https://w3id.org/bridge2ai/standards-schema-all/:alternative_standards_and_tools](https://w3id.org/bridge2ai/standards-schema-all/:alternative_standards_and_tools)
@@ -16,11 +23,13 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:alternative_standards_and
+
## Applicable Classes
-| Name | Description |
-| --- | --- |
-[UseCase](UseCase.md) | Represents a use case for Bridge2AI standards
+| Name | Description | Modifies Slot |
+| --- | --- | --- |
+| [UseCase](UseCase.md) | Represents a use case for Bridge2AI standards | no |
+
@@ -30,10 +39,8 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:alternative_standards_and
## Properties
* Range: [DataStandardOrTool](DataStandardOrTool.md)
-* Multivalued: True
-
-
+* Multivalued: True
@@ -55,6 +62,16 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:alternative_standards_and
+## Mappings
+
+| Mapping Type | Mapped Value |
+| --- | --- |
+| self | https://w3id.org/bridge2ai/standards-schema-all/:alternative_standards_and_tools |
+| native | https://w3id.org/bridge2ai/standards-schema-all/:alternative_standards_and_tools |
+
+
+
+
## LinkML Source
@@ -67,11 +84,11 @@ from_schema: https://w3id.org/bridge2ai/standards-schema-all
rank: 1000
is_a: node_property
domain: NamedThing
-multivalued: true
alias: alternative_standards_and_tools
domain_of:
- UseCase
range: DataStandardOrTool
+multivalued: true
```
\ No newline at end of file
diff --git a/docs/category.md b/docs/category.md
index c3f2298..5cfb113 100644
--- a/docs/category.md
+++ b/docs/category.md
@@ -1,7 +1,14 @@
+
+
# Slot: category
+
+
_Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., "BiomedicalStandard"._
+
+
+
URI: [https://w3id.org/bridge2ai/standards-schema-all/:category](https://w3id.org/bridge2ai/standards-schema-all/:category)
@@ -16,26 +23,28 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:category](https://w3id.or
+
## Applicable Classes
-| Name | Description |
-| --- | --- |
-[NamedThing](NamedThing.md) | A generic grouping for any identifiable entity
-[UseCase](UseCase.md) | Represents a use case for Bridge2AI standards
-[DataStandardOrTool](DataStandardOrTool.md) | Represents a standard or tool in the Bridge2AI Standards Registry
-[DataStandard](DataStandard.md) | Represents a general purpose standard in the Bridge2AI Standards Registry
-[BiomedicalStandard](BiomedicalStandard.md) | Represents a standard in the Bridge2AI Standards Registry with particular app...
-[Registry](Registry.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a...
-[OntologyOrVocabulary](OntologyOrVocabulary.md) | A set of concepts and categories, potentially defined or accompanied by their...
-[ModelRepository](ModelRepository.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a...
-[ReferenceDataOrDataset](ReferenceDataOrDataset.md) | Represents a resource in the Bridge2AI Standards Registry serving as a standa...
-[SoftwareOrTool](SoftwareOrTool.md) | Represents a piece of software or computational tool in the Bridge2AI Standar...
-[ReferenceImplementation](ReferenceImplementation.md) | Represents an implementation of one or more standards or tools in the Bridge2...
-[TrainingProgram](TrainingProgram.md) | Represents a training program for skills and experience related to standards ...
-[DataTopic](DataTopic.md) | Represents a general data topic for Bridge2AI data or the tools/standards app...
-[AnatomicalEntity](AnatomicalEntity.md) | A subcellular location, cell type or gross anatomical part
-[Organization](Organization.md) | Represents a group or organization related to or responsible for one or more ...
-[DataSubstrate](DataSubstrate.md) | Represents a data substrate for Bridge2AI data
+| Name | Description | Modifies Slot |
+| --- | --- | --- |
+| [AnatomicalEntity](AnatomicalEntity.md) | A subcellular location, cell type or gross anatomical part | no |
+| [DataStandard](DataStandard.md) | Represents a general purpose standard in the Bridge2AI Standards Registry | no |
+| [ReferenceDataOrDataset](ReferenceDataOrDataset.md) | Represents a resource in the Bridge2AI Standards Registry serving as a standa... | no |
+| [Registry](Registry.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a... | no |
+| [OntologyOrVocabulary](OntologyOrVocabulary.md) | A set of concepts and categories, potentially defined or accompanied by their... | no |
+| [BiomedicalStandard](BiomedicalStandard.md) | Represents a standard in the Bridge2AI Standards Registry with particular app... | no |
+| [ModelRepository](ModelRepository.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a... | no |
+| [UseCase](UseCase.md) | Represents a use case for Bridge2AI standards | no |
+| [DataStandardOrTool](DataStandardOrTool.md) | Represents a standard or tool in the Bridge2AI Standards Registry | no |
+| [DataTopic](DataTopic.md) | Represents a general data topic for Bridge2AI data or the tools/standards app... | no |
+| [NamedThing](NamedThing.md) | A generic grouping for any identifiable entity | no |
+| [TrainingProgram](TrainingProgram.md) | Represents a training program for skills and experience related to standards ... | no |
+| [DataSubstrate](DataSubstrate.md) | Represents a data substrate for Bridge2AI data | no |
+| [SoftwareOrTool](SoftwareOrTool.md) | Represents a piece of software or computational tool in the Bridge2AI Standar... | no |
+| [Organization](Organization.md) | Represents a group or organization related to or responsible for one or more ... | no |
+| [ReferenceImplementation](ReferenceImplementation.md) | Represents an implementation of one or more standards or tools in the Bridge2... | no |
+
@@ -50,8 +59,6 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:category](https://w3id.or
-
-
## Identifier and Mapping Information
@@ -68,6 +75,16 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:category](https://w3id.or
+## Mappings
+
+| Mapping Type | Mapped Value |
+| --- | --- |
+| self | https://w3id.org/bridge2ai/standards-schema-all/:category |
+| native | https://w3id.org/bridge2ai/standards-schema-all/:category |
+
+
+
+
## LinkML Source
diff --git a/docs/collection.md b/docs/collection.md
index 98b3c64..91f0a1c 100644
--- a/docs/collection.md
+++ b/docs/collection.md
@@ -1,7 +1,14 @@
+
+
# Slot: collection
+
+
_Tags for specific sets of standards._
+
+
+
URI: [https://w3id.org/bridge2ai/standards-schema-all/:collection](https://w3id.org/bridge2ai/standards-schema-all/:collection)
@@ -16,20 +23,22 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:collection](https://w3id.
+
## Applicable Classes
-| Name | Description |
-| --- | --- |
-[DataStandardOrTool](DataStandardOrTool.md) | Represents a standard or tool in the Bridge2AI Standards Registry
-[DataStandard](DataStandard.md) | Represents a general purpose standard in the Bridge2AI Standards Registry
-[BiomedicalStandard](BiomedicalStandard.md) | Represents a standard in the Bridge2AI Standards Registry with particular app...
-[Registry](Registry.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a...
-[OntologyOrVocabulary](OntologyOrVocabulary.md) | A set of concepts and categories, potentially defined or accompanied by their...
-[ModelRepository](ModelRepository.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a...
-[ReferenceDataOrDataset](ReferenceDataOrDataset.md) | Represents a resource in the Bridge2AI Standards Registry serving as a standa...
-[SoftwareOrTool](SoftwareOrTool.md) | Represents a piece of software or computational tool in the Bridge2AI Standar...
-[ReferenceImplementation](ReferenceImplementation.md) | Represents an implementation of one or more standards or tools in the Bridge2...
-[TrainingProgram](TrainingProgram.md) | Represents a training program for skills and experience related to standards ...
+| Name | Description | Modifies Slot |
+| --- | --- | --- |
+| [DataStandard](DataStandard.md) | Represents a general purpose standard in the Bridge2AI Standards Registry | no |
+| [ReferenceDataOrDataset](ReferenceDataOrDataset.md) | Represents a resource in the Bridge2AI Standards Registry serving as a standa... | no |
+| [Registry](Registry.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a... | no |
+| [OntologyOrVocabulary](OntologyOrVocabulary.md) | A set of concepts and categories, potentially defined or accompanied by their... | no |
+| [BiomedicalStandard](BiomedicalStandard.md) | Represents a standard in the Bridge2AI Standards Registry with particular app... | no |
+| [ModelRepository](ModelRepository.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a... | no |
+| [DataStandardOrTool](DataStandardOrTool.md) | Represents a standard or tool in the Bridge2AI Standards Registry | no |
+| [TrainingProgram](TrainingProgram.md) | Represents a training program for skills and experience related to standards ... | no |
+| [SoftwareOrTool](SoftwareOrTool.md) | Represents a piece of software or computational tool in the Bridge2AI Standar... | no |
+| [ReferenceImplementation](ReferenceImplementation.md) | Represents an implementation of one or more standards or tools in the Bridge2... | no |
+
@@ -39,10 +48,8 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:collection](https://w3id.
## Properties
* Range: [StandardsCollectionTag](StandardsCollectionTag.md)
-* Multivalued: True
-
-
+* Multivalued: True
@@ -64,6 +71,16 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:collection](https://w3id.
+## Mappings
+
+| Mapping Type | Mapped Value |
+| --- | --- |
+| self | https://w3id.org/bridge2ai/standards-schema-all/:collection |
+| native | https://w3id.org/bridge2ai/standards-schema-all/:collection |
+
+
+
+
## LinkML Source
@@ -74,11 +91,11 @@ from_schema: https://w3id.org/bridge2ai/standards-schema-all
rank: 1000
is_a: node_property
domain: NamedThing
-multivalued: true
alias: collection
domain_of:
- DataStandardOrTool
range: StandardsCollectionTag
+multivalued: true
```
\ No newline at end of file
diff --git a/docs/concerns_data_topic.md b/docs/concerns_data_topic.md
index 4b1a6fc..342967a 100644
--- a/docs/concerns_data_topic.md
+++ b/docs/concerns_data_topic.md
@@ -1,7 +1,14 @@
+
+
# Slot: concerns_data_topic
+
+
_Subject standard is generally applied in the context of object data topic._
+
+
+
URI: [https://w3id.org/bridge2ai/standards-schema-all/:concerns_data_topic](https://w3id.org/bridge2ai/standards-schema-all/:concerns_data_topic)
@@ -16,20 +23,22 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:concerns_data_topic](http
+
## Applicable Classes
-| Name | Description |
-| --- | --- |
-[DataStandardOrTool](DataStandardOrTool.md) | Represents a standard or tool in the Bridge2AI Standards Registry
-[DataStandard](DataStandard.md) | Represents a general purpose standard in the Bridge2AI Standards Registry
-[BiomedicalStandard](BiomedicalStandard.md) | Represents a standard in the Bridge2AI Standards Registry with particular app...
-[Registry](Registry.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a...
-[OntologyOrVocabulary](OntologyOrVocabulary.md) | A set of concepts and categories, potentially defined or accompanied by their...
-[ModelRepository](ModelRepository.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a...
-[ReferenceDataOrDataset](ReferenceDataOrDataset.md) | Represents a resource in the Bridge2AI Standards Registry serving as a standa...
-[SoftwareOrTool](SoftwareOrTool.md) | Represents a piece of software or computational tool in the Bridge2AI Standar...
-[ReferenceImplementation](ReferenceImplementation.md) | Represents an implementation of one or more standards or tools in the Bridge2...
-[TrainingProgram](TrainingProgram.md) | Represents a training program for skills and experience related to standards ...
+| Name | Description | Modifies Slot |
+| --- | --- | --- |
+| [DataStandard](DataStandard.md) | Represents a general purpose standard in the Bridge2AI Standards Registry | no |
+| [ReferenceDataOrDataset](ReferenceDataOrDataset.md) | Represents a resource in the Bridge2AI Standards Registry serving as a standa... | no |
+| [Registry](Registry.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a... | no |
+| [OntologyOrVocabulary](OntologyOrVocabulary.md) | A set of concepts and categories, potentially defined or accompanied by their... | no |
+| [BiomedicalStandard](BiomedicalStandard.md) | Represents a standard in the Bridge2AI Standards Registry with particular app... | no |
+| [ModelRepository](ModelRepository.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a... | no |
+| [DataStandardOrTool](DataStandardOrTool.md) | Represents a standard or tool in the Bridge2AI Standards Registry | no |
+| [TrainingProgram](TrainingProgram.md) | Represents a training program for skills and experience related to standards ... | no |
+| [SoftwareOrTool](SoftwareOrTool.md) | Represents a piece of software or computational tool in the Bridge2AI Standar... | no |
+| [ReferenceImplementation](ReferenceImplementation.md) | Represents an implementation of one or more standards or tools in the Bridge2... | no |
+
@@ -39,10 +48,8 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:concerns_data_topic](http
## Properties
* Range: [DataTopic](DataTopic.md)
-* Multivalued: True
-
-
+* Multivalued: True
@@ -64,6 +71,16 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:concerns_data_topic](http
+## Mappings
+
+| Mapping Type | Mapped Value |
+| --- | --- |
+| self | https://w3id.org/bridge2ai/standards-schema-all/:concerns_data_topic |
+| native | https://w3id.org/bridge2ai/standards-schema-all/:concerns_data_topic |
+
+
+
+
## LinkML Source
@@ -74,12 +91,12 @@ from_schema: https://w3id.org/bridge2ai/standards-schema-all
rank: 1000
is_a: related_to
domain: DataStandardOrTool
-multivalued: true
inherited: true
alias: concerns_data_topic
domain_of:
- DataStandardOrTool
range: DataTopic
+multivalued: true
```
\ No newline at end of file
diff --git a/docs/contribution_date.md b/docs/contribution_date.md
index 7de2662..bd47326 100644
--- a/docs/contribution_date.md
+++ b/docs/contribution_date.md
@@ -1,7 +1,14 @@
+
+
# Slot: contribution_date
+
+
_The date on which the node was added._
+
+
+
URI: [https://w3id.org/bridge2ai/standards-schema-all/:contribution_date](https://w3id.org/bridge2ai/standards-schema-all/:contribution_date)
@@ -16,26 +23,28 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:contribution_date](https:
+
## Applicable Classes
-| Name | Description |
-| --- | --- |
-[NamedThing](NamedThing.md) | A generic grouping for any identifiable entity
-[UseCase](UseCase.md) | Represents a use case for Bridge2AI standards
-[DataStandardOrTool](DataStandardOrTool.md) | Represents a standard or tool in the Bridge2AI Standards Registry
-[DataStandard](DataStandard.md) | Represents a general purpose standard in the Bridge2AI Standards Registry
-[BiomedicalStandard](BiomedicalStandard.md) | Represents a standard in the Bridge2AI Standards Registry with particular app...
-[Registry](Registry.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a...
-[OntologyOrVocabulary](OntologyOrVocabulary.md) | A set of concepts and categories, potentially defined or accompanied by their...
-[ModelRepository](ModelRepository.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a...
-[ReferenceDataOrDataset](ReferenceDataOrDataset.md) | Represents a resource in the Bridge2AI Standards Registry serving as a standa...
-[SoftwareOrTool](SoftwareOrTool.md) | Represents a piece of software or computational tool in the Bridge2AI Standar...
-[ReferenceImplementation](ReferenceImplementation.md) | Represents an implementation of one or more standards or tools in the Bridge2...
-[TrainingProgram](TrainingProgram.md) | Represents a training program for skills and experience related to standards ...
-[DataTopic](DataTopic.md) | Represents a general data topic for Bridge2AI data or the tools/standards app...
-[AnatomicalEntity](AnatomicalEntity.md) | A subcellular location, cell type or gross anatomical part
-[Organization](Organization.md) | Represents a group or organization related to or responsible for one or more ...
-[DataSubstrate](DataSubstrate.md) | Represents a data substrate for Bridge2AI data
+| Name | Description | Modifies Slot |
+| --- | --- | --- |
+| [AnatomicalEntity](AnatomicalEntity.md) | A subcellular location, cell type or gross anatomical part | no |
+| [DataStandard](DataStandard.md) | Represents a general purpose standard in the Bridge2AI Standards Registry | no |
+| [ReferenceDataOrDataset](ReferenceDataOrDataset.md) | Represents a resource in the Bridge2AI Standards Registry serving as a standa... | no |
+| [Registry](Registry.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a... | no |
+| [OntologyOrVocabulary](OntologyOrVocabulary.md) | A set of concepts and categories, potentially defined or accompanied by their... | no |
+| [BiomedicalStandard](BiomedicalStandard.md) | Represents a standard in the Bridge2AI Standards Registry with particular app... | no |
+| [ModelRepository](ModelRepository.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a... | no |
+| [UseCase](UseCase.md) | Represents a use case for Bridge2AI standards | no |
+| [DataStandardOrTool](DataStandardOrTool.md) | Represents a standard or tool in the Bridge2AI Standards Registry | no |
+| [DataTopic](DataTopic.md) | Represents a general data topic for Bridge2AI data or the tools/standards app... | no |
+| [NamedThing](NamedThing.md) | A generic grouping for any identifiable entity | no |
+| [TrainingProgram](TrainingProgram.md) | Represents a training program for skills and experience related to standards ... | no |
+| [DataSubstrate](DataSubstrate.md) | Represents a data substrate for Bridge2AI data | no |
+| [SoftwareOrTool](SoftwareOrTool.md) | Represents a piece of software or computational tool in the Bridge2AI Standar... | no |
+| [Organization](Organization.md) | Represents a group or organization related to or responsible for one or more ... | no |
+| [ReferenceImplementation](ReferenceImplementation.md) | Represents an implementation of one or more standards or tools in the Bridge2... | no |
+
@@ -51,8 +60,6 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:contribution_date](https:
-
-
## Examples
| Value |
@@ -75,6 +82,16 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:contribution_date](https:
+## Mappings
+
+| Mapping Type | Mapped Value |
+| --- | --- |
+| self | https://w3id.org/bridge2ai/standards-schema-all/:contribution_date |
+| native | https://w3id.org/bridge2ai/standards-schema-all/:contribution_date |
+
+
+
+
## LinkML Source
diff --git a/docs/contributor_github_name.md b/docs/contributor_github_name.md
index f7c3dea..39a1b87 100644
--- a/docs/contributor_github_name.md
+++ b/docs/contributor_github_name.md
@@ -1,7 +1,14 @@
+
+
# Slot: contributor_github_name
+
+
_The name of the github user who added this node._
+
+
+
URI: [https://w3id.org/bridge2ai/standards-schema-all/:contributor_github_name](https://w3id.org/bridge2ai/standards-schema-all/:contributor_github_name)
@@ -16,26 +23,28 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:contributor_github_name](
+
## Applicable Classes
-| Name | Description |
-| --- | --- |
-[NamedThing](NamedThing.md) | A generic grouping for any identifiable entity
-[UseCase](UseCase.md) | Represents a use case for Bridge2AI standards
-[DataStandardOrTool](DataStandardOrTool.md) | Represents a standard or tool in the Bridge2AI Standards Registry
-[DataStandard](DataStandard.md) | Represents a general purpose standard in the Bridge2AI Standards Registry
-[BiomedicalStandard](BiomedicalStandard.md) | Represents a standard in the Bridge2AI Standards Registry with particular app...
-[Registry](Registry.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a...
-[OntologyOrVocabulary](OntologyOrVocabulary.md) | A set of concepts and categories, potentially defined or accompanied by their...
-[ModelRepository](ModelRepository.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a...
-[ReferenceDataOrDataset](ReferenceDataOrDataset.md) | Represents a resource in the Bridge2AI Standards Registry serving as a standa...
-[SoftwareOrTool](SoftwareOrTool.md) | Represents a piece of software or computational tool in the Bridge2AI Standar...
-[ReferenceImplementation](ReferenceImplementation.md) | Represents an implementation of one or more standards or tools in the Bridge2...
-[TrainingProgram](TrainingProgram.md) | Represents a training program for skills and experience related to standards ...
-[DataTopic](DataTopic.md) | Represents a general data topic for Bridge2AI data or the tools/standards app...
-[AnatomicalEntity](AnatomicalEntity.md) | A subcellular location, cell type or gross anatomical part
-[Organization](Organization.md) | Represents a group or organization related to or responsible for one or more ...
-[DataSubstrate](DataSubstrate.md) | Represents a data substrate for Bridge2AI data
+| Name | Description | Modifies Slot |
+| --- | --- | --- |
+| [AnatomicalEntity](AnatomicalEntity.md) | A subcellular location, cell type or gross anatomical part | no |
+| [DataStandard](DataStandard.md) | Represents a general purpose standard in the Bridge2AI Standards Registry | no |
+| [ReferenceDataOrDataset](ReferenceDataOrDataset.md) | Represents a resource in the Bridge2AI Standards Registry serving as a standa... | no |
+| [Registry](Registry.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a... | no |
+| [OntologyOrVocabulary](OntologyOrVocabulary.md) | A set of concepts and categories, potentially defined or accompanied by their... | no |
+| [BiomedicalStandard](BiomedicalStandard.md) | Represents a standard in the Bridge2AI Standards Registry with particular app... | no |
+| [ModelRepository](ModelRepository.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a... | no |
+| [UseCase](UseCase.md) | Represents a use case for Bridge2AI standards | no |
+| [DataStandardOrTool](DataStandardOrTool.md) | Represents a standard or tool in the Bridge2AI Standards Registry | no |
+| [DataTopic](DataTopic.md) | Represents a general data topic for Bridge2AI data or the tools/standards app... | no |
+| [NamedThing](NamedThing.md) | A generic grouping for any identifiable entity | no |
+| [TrainingProgram](TrainingProgram.md) | Represents a training program for skills and experience related to standards ... | no |
+| [DataSubstrate](DataSubstrate.md) | Represents a data substrate for Bridge2AI data | no |
+| [SoftwareOrTool](SoftwareOrTool.md) | Represents a piece of software or computational tool in the Bridge2AI Standar... | no |
+| [Organization](Organization.md) | Represents a group or organization related to or responsible for one or more ... | no |
+| [ReferenceImplementation](ReferenceImplementation.md) | Represents an implementation of one or more standards or tools in the Bridge2... | no |
+
@@ -50,8 +59,6 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:contributor_github_name](
-
-
## Identifier and Mapping Information
@@ -68,6 +75,16 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:contributor_github_name](
+## Mappings
+
+| Mapping Type | Mapped Value |
+| --- | --- |
+| self | https://w3id.org/bridge2ai/standards-schema-all/:contributor_github_name |
+| native | https://w3id.org/bridge2ai/standards-schema-all/:contributor_github_name |
+
+
+
+
## LinkML Source
diff --git a/docs/contributor_name.md b/docs/contributor_name.md
index 43bf1fd..5872e5b 100644
--- a/docs/contributor_name.md
+++ b/docs/contributor_name.md
@@ -1,7 +1,14 @@
+
+
# Slot: contributor_name
+
+
_The name of the person who added this node._
+
+
+
URI: [https://w3id.org/bridge2ai/standards-schema-all/:contributor_name](https://w3id.org/bridge2ai/standards-schema-all/:contributor_name)
@@ -16,26 +23,28 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:contributor_name](https:/
+
## Applicable Classes
-| Name | Description |
-| --- | --- |
-[NamedThing](NamedThing.md) | A generic grouping for any identifiable entity
-[UseCase](UseCase.md) | Represents a use case for Bridge2AI standards
-[DataStandardOrTool](DataStandardOrTool.md) | Represents a standard or tool in the Bridge2AI Standards Registry
-[DataStandard](DataStandard.md) | Represents a general purpose standard in the Bridge2AI Standards Registry
-[BiomedicalStandard](BiomedicalStandard.md) | Represents a standard in the Bridge2AI Standards Registry with particular app...
-[Registry](Registry.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a...
-[OntologyOrVocabulary](OntologyOrVocabulary.md) | A set of concepts and categories, potentially defined or accompanied by their...
-[ModelRepository](ModelRepository.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a...
-[ReferenceDataOrDataset](ReferenceDataOrDataset.md) | Represents a resource in the Bridge2AI Standards Registry serving as a standa...
-[SoftwareOrTool](SoftwareOrTool.md) | Represents a piece of software or computational tool in the Bridge2AI Standar...
-[ReferenceImplementation](ReferenceImplementation.md) | Represents an implementation of one or more standards or tools in the Bridge2...
-[TrainingProgram](TrainingProgram.md) | Represents a training program for skills and experience related to standards ...
-[DataTopic](DataTopic.md) | Represents a general data topic for Bridge2AI data or the tools/standards app...
-[AnatomicalEntity](AnatomicalEntity.md) | A subcellular location, cell type or gross anatomical part
-[Organization](Organization.md) | Represents a group or organization related to or responsible for one or more ...
-[DataSubstrate](DataSubstrate.md) | Represents a data substrate for Bridge2AI data
+| Name | Description | Modifies Slot |
+| --- | --- | --- |
+| [AnatomicalEntity](AnatomicalEntity.md) | A subcellular location, cell type or gross anatomical part | no |
+| [DataStandard](DataStandard.md) | Represents a general purpose standard in the Bridge2AI Standards Registry | no |
+| [ReferenceDataOrDataset](ReferenceDataOrDataset.md) | Represents a resource in the Bridge2AI Standards Registry serving as a standa... | no |
+| [Registry](Registry.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a... | no |
+| [OntologyOrVocabulary](OntologyOrVocabulary.md) | A set of concepts and categories, potentially defined or accompanied by their... | no |
+| [BiomedicalStandard](BiomedicalStandard.md) | Represents a standard in the Bridge2AI Standards Registry with particular app... | no |
+| [ModelRepository](ModelRepository.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a... | no |
+| [UseCase](UseCase.md) | Represents a use case for Bridge2AI standards | no |
+| [DataStandardOrTool](DataStandardOrTool.md) | Represents a standard or tool in the Bridge2AI Standards Registry | no |
+| [DataTopic](DataTopic.md) | Represents a general data topic for Bridge2AI data or the tools/standards app... | no |
+| [NamedThing](NamedThing.md) | A generic grouping for any identifiable entity | no |
+| [TrainingProgram](TrainingProgram.md) | Represents a training program for skills and experience related to standards ... | no |
+| [DataSubstrate](DataSubstrate.md) | Represents a data substrate for Bridge2AI data | no |
+| [SoftwareOrTool](SoftwareOrTool.md) | Represents a piece of software or computational tool in the Bridge2AI Standar... | no |
+| [Organization](Organization.md) | Represents a group or organization related to or responsible for one or more ... | no |
+| [ReferenceImplementation](ReferenceImplementation.md) | Represents an implementation of one or more standards or tools in the Bridge2... | no |
+
@@ -50,8 +59,6 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:contributor_name](https:/
-
-
## Identifier and Mapping Information
@@ -68,6 +75,16 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:contributor_name](https:/
+## Mappings
+
+| Mapping Type | Mapped Value |
+| --- | --- |
+| self | https://w3id.org/bridge2ai/standards-schema-all/:contributor_name |
+| native | https://w3id.org/bridge2ai/standards-schema-all/:contributor_name |
+
+
+
+
## LinkML Source
diff --git a/docs/contributor_orcid.md b/docs/contributor_orcid.md
index 18d0ac4..26f967f 100644
--- a/docs/contributor_orcid.md
+++ b/docs/contributor_orcid.md
@@ -1,7 +1,14 @@
+
+
# Slot: contributor_orcid
+
+
_The ORCiD of the person who added this node._
+
+
+
URI: [https://w3id.org/bridge2ai/standards-schema-all/:contributor_orcid](https://w3id.org/bridge2ai/standards-schema-all/:contributor_orcid)
@@ -16,26 +23,28 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:contributor_orcid](https:
+
## Applicable Classes
-| Name | Description |
-| --- | --- |
-[NamedThing](NamedThing.md) | A generic grouping for any identifiable entity
-[UseCase](UseCase.md) | Represents a use case for Bridge2AI standards
-[DataStandardOrTool](DataStandardOrTool.md) | Represents a standard or tool in the Bridge2AI Standards Registry
-[DataStandard](DataStandard.md) | Represents a general purpose standard in the Bridge2AI Standards Registry
-[BiomedicalStandard](BiomedicalStandard.md) | Represents a standard in the Bridge2AI Standards Registry with particular app...
-[Registry](Registry.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a...
-[OntologyOrVocabulary](OntologyOrVocabulary.md) | A set of concepts and categories, potentially defined or accompanied by their...
-[ModelRepository](ModelRepository.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a...
-[ReferenceDataOrDataset](ReferenceDataOrDataset.md) | Represents a resource in the Bridge2AI Standards Registry serving as a standa...
-[SoftwareOrTool](SoftwareOrTool.md) | Represents a piece of software or computational tool in the Bridge2AI Standar...
-[ReferenceImplementation](ReferenceImplementation.md) | Represents an implementation of one or more standards or tools in the Bridge2...
-[TrainingProgram](TrainingProgram.md) | Represents a training program for skills and experience related to standards ...
-[DataTopic](DataTopic.md) | Represents a general data topic for Bridge2AI data or the tools/standards app...
-[AnatomicalEntity](AnatomicalEntity.md) | A subcellular location, cell type or gross anatomical part
-[Organization](Organization.md) | Represents a group or organization related to or responsible for one or more ...
-[DataSubstrate](DataSubstrate.md) | Represents a data substrate for Bridge2AI data
+| Name | Description | Modifies Slot |
+| --- | --- | --- |
+| [AnatomicalEntity](AnatomicalEntity.md) | A subcellular location, cell type or gross anatomical part | no |
+| [DataStandard](DataStandard.md) | Represents a general purpose standard in the Bridge2AI Standards Registry | no |
+| [ReferenceDataOrDataset](ReferenceDataOrDataset.md) | Represents a resource in the Bridge2AI Standards Registry serving as a standa... | no |
+| [Registry](Registry.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a... | no |
+| [OntologyOrVocabulary](OntologyOrVocabulary.md) | A set of concepts and categories, potentially defined or accompanied by their... | no |
+| [BiomedicalStandard](BiomedicalStandard.md) | Represents a standard in the Bridge2AI Standards Registry with particular app... | no |
+| [ModelRepository](ModelRepository.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a... | no |
+| [UseCase](UseCase.md) | Represents a use case for Bridge2AI standards | no |
+| [DataStandardOrTool](DataStandardOrTool.md) | Represents a standard or tool in the Bridge2AI Standards Registry | no |
+| [DataTopic](DataTopic.md) | Represents a general data topic for Bridge2AI data or the tools/standards app... | no |
+| [NamedThing](NamedThing.md) | A generic grouping for any identifiable entity | no |
+| [TrainingProgram](TrainingProgram.md) | Represents a training program for skills and experience related to standards ... | no |
+| [DataSubstrate](DataSubstrate.md) | Represents a data substrate for Bridge2AI data | no |
+| [SoftwareOrTool](SoftwareOrTool.md) | Represents a piece of software or computational tool in the Bridge2AI Standar... | no |
+| [Organization](Organization.md) | Represents a group or organization related to or responsible for one or more ... | no |
+| [ReferenceImplementation](ReferenceImplementation.md) | Represents an implementation of one or more standards or tools in the Bridge2... | no |
+
@@ -51,8 +60,6 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:contributor_orcid](https:
-
-
## Examples
| Value |
@@ -75,6 +82,16 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:contributor_orcid](https:
+## Mappings
+
+| Mapping Type | Mapped Value |
+| --- | --- |
+| self | https://w3id.org/bridge2ai/standards-schema-all/:contributor_orcid |
+| native | https://w3id.org/bridge2ai/standards-schema-all/:contributor_orcid |
+
+
+
+
## LinkML Source
diff --git a/docs/data_standardortools_collection.md b/docs/data_standardortools_collection.md
index 0066504..b68c9a9 100644
--- a/docs/data_standardortools_collection.md
+++ b/docs/data_standardortools_collection.md
@@ -1,7 +1,14 @@
+
+
# Slot: data_standardortools_collection
+
+
_Collection of associated data standards or tools_
+
+
+
URI: [https://w3id.org/bridge2ai/standards-schema-all/:data_standardortools_collection](https://w3id.org/bridge2ai/standards-schema-all/:data_standardortools_collection)
@@ -11,11 +18,13 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:data_standardortools_coll
+
## Applicable Classes
-| Name | Description |
-| --- | --- |
-[DataStandardOrToolContainer](DataStandardOrToolContainer.md) | A container for DataStandardOrTool(s)
+| Name | Description | Modifies Slot |
+| --- | --- | --- |
+| [DataStandardOrToolContainer](DataStandardOrToolContainer.md) | A container for DataStandardOrTool(s) | no |
+
@@ -25,10 +34,8 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:data_standardortools_coll
## Properties
* Range: [DataStandardOrTool](DataStandardOrTool.md)
-* Multivalued: True
-
-
+* Multivalued: True
@@ -50,6 +57,16 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:data_standardortools_coll
+## Mappings
+
+| Mapping Type | Mapped Value |
+| --- | --- |
+| self | https://w3id.org/bridge2ai/standards-schema-all/:data_standardortools_collection |
+| native | https://w3id.org/bridge2ai/standards-schema-all/:data_standardortools_collection |
+
+
+
+
## LinkML Source
@@ -58,11 +75,11 @@ name: data_standardortools_collection
description: Collection of associated data standards or tools
from_schema: https://w3id.org/bridge2ai/standards-schema-all
rank: 1000
-multivalued: true
alias: data_standardortools_collection
domain_of:
- DataStandardOrToolContainer
range: DataStandardOrTool
+multivalued: true
inlined: true
inlined_as_list: true
diff --git a/docs/data_substrates.md b/docs/data_substrates.md
index a988a3c..10c7c3c 100644
--- a/docs/data_substrates.md
+++ b/docs/data_substrates.md
@@ -1,7 +1,14 @@
+
+
# Slot: data_substrates
+
+
_Relevance of the use case to one or more data substrates._
+
+
+
URI: [https://w3id.org/bridge2ai/standards-schema-all/:data_substrates](https://w3id.org/bridge2ai/standards-schema-all/:data_substrates)
@@ -16,11 +23,13 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:data_substrates](https://
+
## Applicable Classes
-| Name | Description |
-| --- | --- |
-[UseCase](UseCase.md) | Represents a use case for Bridge2AI standards
+| Name | Description | Modifies Slot |
+| --- | --- | --- |
+| [UseCase](UseCase.md) | Represents a use case for Bridge2AI standards | no |
+
@@ -30,10 +39,8 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:data_substrates](https://
## Properties
* Range: [DataSubstrate](DataSubstrate.md)
-* Multivalued: True
-
-
+* Multivalued: True
@@ -55,6 +62,16 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:data_substrates](https://
+## Mappings
+
+| Mapping Type | Mapped Value |
+| --- | --- |
+| self | https://w3id.org/bridge2ai/standards-schema-all/:data_substrates |
+| native | https://w3id.org/bridge2ai/standards-schema-all/:data_substrates |
+
+
+
+
## LinkML Source
@@ -65,11 +82,11 @@ from_schema: https://w3id.org/bridge2ai/standards-schema-all
rank: 1000
is_a: node_property
domain: NamedThing
-multivalued: true
alias: data_substrates
domain_of:
- UseCase
range: DataSubstrate
+multivalued: true
```
\ No newline at end of file
diff --git a/docs/data_substrates_collection.md b/docs/data_substrates_collection.md
index 9cd67af..d3f0f98 100644
--- a/docs/data_substrates_collection.md
+++ b/docs/data_substrates_collection.md
@@ -1,7 +1,14 @@
+
+
# Slot: data_substrates_collection
+
+
_Collection of associated data substrates_
+
+
+
URI: [https://w3id.org/bridge2ai/standards-schema-all/:data_substrates_collection](https://w3id.org/bridge2ai/standards-schema-all/:data_substrates_collection)
@@ -11,11 +18,13 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:data_substrates_collectio
+
## Applicable Classes
-| Name | Description |
-| --- | --- |
-[DataSubstrateContainer](DataSubstrateContainer.md) | A container for DataSubstrates
+| Name | Description | Modifies Slot |
+| --- | --- | --- |
+| [DataSubstrateContainer](DataSubstrateContainer.md) | A container for DataSubstrates | no |
+
@@ -25,10 +34,8 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:data_substrates_collectio
## Properties
* Range: [DataSubstrate](DataSubstrate.md)
-* Multivalued: True
-
-
+* Multivalued: True
@@ -50,6 +57,16 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:data_substrates_collectio
+## Mappings
+
+| Mapping Type | Mapped Value |
+| --- | --- |
+| self | https://w3id.org/bridge2ai/standards-schema-all/:data_substrates_collection |
+| native | https://w3id.org/bridge2ai/standards-schema-all/:data_substrates_collection |
+
+
+
+
## LinkML Source
@@ -58,11 +75,11 @@ name: data_substrates_collection
description: Collection of associated data substrates
from_schema: https://w3id.org/bridge2ai/standards-schema-all
rank: 1000
-multivalued: true
alias: data_substrates_collection
domain_of:
- DataSubstrateContainer
range: DataSubstrate
+multivalued: true
inlined: true
inlined_as_list: true
diff --git a/docs/data_topics.md b/docs/data_topics.md
index dd34d8d..8998ca0 100644
--- a/docs/data_topics.md
+++ b/docs/data_topics.md
@@ -1,7 +1,14 @@
+
+
# Slot: data_topics
+
+
_Relevance of the use case to one or more data topics._
+
+
+
URI: [https://w3id.org/bridge2ai/standards-schema-all/:data_topics](https://w3id.org/bridge2ai/standards-schema-all/:data_topics)
@@ -16,11 +23,13 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:data_topics](https://w3id
+
## Applicable Classes
-| Name | Description |
-| --- | --- |
-[UseCase](UseCase.md) | Represents a use case for Bridge2AI standards
+| Name | Description | Modifies Slot |
+| --- | --- | --- |
+| [UseCase](UseCase.md) | Represents a use case for Bridge2AI standards | no |
+
@@ -30,10 +39,8 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:data_topics](https://w3id
## Properties
* Range: [DataTopic](DataTopic.md)
-* Multivalued: True
-
-
+* Multivalued: True
@@ -55,6 +62,16 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:data_topics](https://w3id
+## Mappings
+
+| Mapping Type | Mapped Value |
+| --- | --- |
+| self | https://w3id.org/bridge2ai/standards-schema-all/:data_topics |
+| native | https://w3id.org/bridge2ai/standards-schema-all/:data_topics |
+
+
+
+
## LinkML Source
@@ -65,11 +82,11 @@ from_schema: https://w3id.org/bridge2ai/standards-schema-all
rank: 1000
is_a: node_property
domain: NamedThing
-multivalued: true
alias: data_topics
domain_of:
- UseCase
range: DataTopic
+multivalued: true
```
\ No newline at end of file
diff --git a/docs/data_topics_collection.md b/docs/data_topics_collection.md
index 89bc750..9d68215 100644
--- a/docs/data_topics_collection.md
+++ b/docs/data_topics_collection.md
@@ -1,7 +1,14 @@
+
+
# Slot: data_topics_collection
+
+
_Collection of associated data topics._
+
+
+
URI: [https://w3id.org/bridge2ai/standards-schema-all/:data_topics_collection](https://w3id.org/bridge2ai/standards-schema-all/:data_topics_collection)
@@ -11,11 +18,13 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:data_topics_collection](h
+
## Applicable Classes
-| Name | Description |
-| --- | --- |
-[DataTopicContainer](DataTopicContainer.md) | A container for DataTopics
+| Name | Description | Modifies Slot |
+| --- | --- | --- |
+| [DataTopicContainer](DataTopicContainer.md) | A container for DataTopics | no |
+
@@ -25,10 +34,8 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:data_topics_collection](h
## Properties
* Range: [DataTopic](DataTopic.md)
-* Multivalued: True
-
-
+* Multivalued: True
@@ -50,6 +57,16 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:data_topics_collection](h
+## Mappings
+
+| Mapping Type | Mapped Value |
+| --- | --- |
+| self | https://w3id.org/bridge2ai/standards-schema-all/:data_topics_collection |
+| native | https://w3id.org/bridge2ai/standards-schema-all/:data_topics_collection |
+
+
+
+
## LinkML Source
@@ -58,11 +75,11 @@ name: data_topics_collection
description: Collection of associated data topics.
from_schema: https://w3id.org/bridge2ai/standards-schema-all
rank: 1000
-multivalued: true
alias: data_topics_collection
domain_of:
- DataTopicContainer
range: DataTopic
+multivalued: true
inlined: true
inlined_as_list: true
diff --git a/docs/description.md b/docs/description.md
index 4a8ee14..504c248 100644
--- a/docs/description.md
+++ b/docs/description.md
@@ -1,7 +1,14 @@
+
+
# Slot: description
+
+
_A human-readable description for a thing._
+
+
+
URI: [schema:description](http://schema.org/description)
@@ -11,26 +18,28 @@ URI: [schema:description](http://schema.org/description)
+
## Applicable Classes
-| Name | Description |
-| --- | --- |
-[NamedThing](NamedThing.md) | A generic grouping for any identifiable entity
-[UseCase](UseCase.md) | Represents a use case for Bridge2AI standards
-[DataStandardOrTool](DataStandardOrTool.md) | Represents a standard or tool in the Bridge2AI Standards Registry
-[DataStandard](DataStandard.md) | Represents a general purpose standard in the Bridge2AI Standards Registry
-[BiomedicalStandard](BiomedicalStandard.md) | Represents a standard in the Bridge2AI Standards Registry with particular app...
-[Registry](Registry.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a...
-[OntologyOrVocabulary](OntologyOrVocabulary.md) | A set of concepts and categories, potentially defined or accompanied by their...
-[ModelRepository](ModelRepository.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a...
-[ReferenceDataOrDataset](ReferenceDataOrDataset.md) | Represents a resource in the Bridge2AI Standards Registry serving as a standa...
-[SoftwareOrTool](SoftwareOrTool.md) | Represents a piece of software or computational tool in the Bridge2AI Standar...
-[ReferenceImplementation](ReferenceImplementation.md) | Represents an implementation of one or more standards or tools in the Bridge2...
-[TrainingProgram](TrainingProgram.md) | Represents a training program for skills and experience related to standards ...
-[DataTopic](DataTopic.md) | Represents a general data topic for Bridge2AI data or the tools/standards app...
-[AnatomicalEntity](AnatomicalEntity.md) | A subcellular location, cell type or gross anatomical part
-[Organization](Organization.md) | Represents a group or organization related to or responsible for one or more ...
-[DataSubstrate](DataSubstrate.md) | Represents a data substrate for Bridge2AI data
+| Name | Description | Modifies Slot |
+| --- | --- | --- |
+| [AnatomicalEntity](AnatomicalEntity.md) | A subcellular location, cell type or gross anatomical part | no |
+| [DataStandard](DataStandard.md) | Represents a general purpose standard in the Bridge2AI Standards Registry | no |
+| [ReferenceDataOrDataset](ReferenceDataOrDataset.md) | Represents a resource in the Bridge2AI Standards Registry serving as a standa... | no |
+| [Registry](Registry.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a... | no |
+| [OntologyOrVocabulary](OntologyOrVocabulary.md) | A set of concepts and categories, potentially defined or accompanied by their... | no |
+| [BiomedicalStandard](BiomedicalStandard.md) | Represents a standard in the Bridge2AI Standards Registry with particular app... | no |
+| [ModelRepository](ModelRepository.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a... | no |
+| [UseCase](UseCase.md) | Represents a use case for Bridge2AI standards | no |
+| [DataStandardOrTool](DataStandardOrTool.md) | Represents a standard or tool in the Bridge2AI Standards Registry | no |
+| [DataTopic](DataTopic.md) | Represents a general data topic for Bridge2AI data or the tools/standards app... | no |
+| [NamedThing](NamedThing.md) | A generic grouping for any identifiable entity | no |
+| [TrainingProgram](TrainingProgram.md) | Represents a training program for skills and experience related to standards ... | no |
+| [DataSubstrate](DataSubstrate.md) | Represents a data substrate for Bridge2AI data | no |
+| [SoftwareOrTool](SoftwareOrTool.md) | Represents a piece of software or computational tool in the Bridge2AI Standar... | no |
+| [Organization](Organization.md) | Represents a group or organization related to or responsible for one or more ... | no |
+| [ReferenceImplementation](ReferenceImplementation.md) | Represents an implementation of one or more standards or tools in the Bridge2... | no |
+
@@ -45,8 +54,6 @@ URI: [schema:description](http://schema.org/description)
-
-
## Identifier and Mapping Information
@@ -63,6 +70,16 @@ URI: [schema:description](http://schema.org/description)
+## Mappings
+
+| Mapping Type | Mapped Value |
+| --- | --- |
+| self | schema:description |
+| native | https://w3id.org/bridge2ai/standards-schema-all/:description |
+
+
+
+
## LinkML Source
diff --git a/docs/edam_id.md b/docs/edam_id.md
index 02efe58..ebdb267 100644
--- a/docs/edam_id.md
+++ b/docs/edam_id.md
@@ -1,7 +1,14 @@
+
+
# Slot: edam_id
+
+
_Unique EDAM identifier_
+
+
+
URI: [https://w3id.org/bridge2ai/standards-schema-all/:edam_id](https://w3id.org/bridge2ai/standards-schema-all/:edam_id)
@@ -11,12 +18,14 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:edam_id](https://w3id.org
+
## Applicable Classes
-| Name | Description |
-| --- | --- |
-[DataTopic](DataTopic.md) | Represents a general data topic for Bridge2AI data or the tools/standards app...
-[DataSubstrate](DataSubstrate.md) | Represents a data substrate for Bridge2AI data
+| Name | Description | Modifies Slot |
+| --- | --- | --- |
+| [DataTopic](DataTopic.md) | Represents a general data topic for Bridge2AI data or the tools/standards app... | no |
+| [DataSubstrate](DataSubstrate.md) | Represents a data substrate for Bridge2AI data | no |
+
@@ -32,8 +41,6 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:edam_id](https://w3id.org
-
-
## Examples
| Value |
@@ -56,6 +63,16 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:edam_id](https://w3id.org
+## Mappings
+
+| Mapping Type | Mapped Value |
+| --- | --- |
+| self | https://w3id.org/bridge2ai/standards-schema-all/:edam_id |
+| native | https://w3id.org/bridge2ai/standards-schema-all/:edam_id |
+
+
+
+
## LinkML Source
@@ -73,8 +90,8 @@ values_from:
- edam.topic
alias: edam_id
domain_of:
-- DataTopic
- DataSubstrate
+- DataTopic
range: edam_identifier
```
diff --git a/docs/enables.md b/docs/enables.md
index de228ee..b801cfd 100644
--- a/docs/enables.md
+++ b/docs/enables.md
@@ -1,7 +1,14 @@
+
+
# Slot: enables
+
+
_Other use case(s) this use case supports or makes possible._
+
+
+
URI: [https://w3id.org/bridge2ai/standards-schema-all/:enables](https://w3id.org/bridge2ai/standards-schema-all/:enables)
@@ -16,11 +23,13 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:enables](https://w3id.org
+
## Applicable Classes
-| Name | Description |
-| --- | --- |
-[UseCase](UseCase.md) | Represents a use case for Bridge2AI standards
+| Name | Description | Modifies Slot |
+| --- | --- | --- |
+| [UseCase](UseCase.md) | Represents a use case for Bridge2AI standards | no |
+
@@ -30,10 +39,8 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:enables](https://w3id.org
## Properties
* Range: [UseCase](UseCase.md)
-* Multivalued: True
-
-
+* Multivalued: True
@@ -55,6 +62,16 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:enables](https://w3id.org
+## Mappings
+
+| Mapping Type | Mapped Value |
+| --- | --- |
+| self | https://w3id.org/bridge2ai/standards-schema-all/:enables |
+| native | https://w3id.org/bridge2ai/standards-schema-all/:enables |
+
+
+
+
## LinkML Source
@@ -65,11 +82,11 @@ from_schema: https://w3id.org/bridge2ai/standards-schema-all
rank: 1000
is_a: node_property
domain: NamedThing
-multivalued: true
alias: enables
domain_of:
- UseCase
range: UseCase
+multivalued: true
```
\ No newline at end of file
diff --git a/docs/file_extensions.md b/docs/file_extensions.md
index 1af40dc..8967e22 100644
--- a/docs/file_extensions.md
+++ b/docs/file_extensions.md
@@ -1,7 +1,14 @@
+
+
# Slot: file_extensions
+
+
_Commonly used file extensions for this substrate._
+
+
+
URI: [https://w3id.org/bridge2ai/standards-schema-all/:file_extensions](https://w3id.org/bridge2ai/standards-schema-all/:file_extensions)
@@ -16,11 +23,13 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:file_extensions](https://
+
## Applicable Classes
-| Name | Description |
-| --- | --- |
-[DataSubstrate](DataSubstrate.md) | Represents a data substrate for Bridge2AI data
+| Name | Description | Modifies Slot |
+| --- | --- | --- |
+| [DataSubstrate](DataSubstrate.md) | Represents a data substrate for Bridge2AI data | no |
+
@@ -30,10 +39,8 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:file_extensions](https://
## Properties
* Range: [String](String.md)
-* Multivalued: True
-
-
+* Multivalued: True
@@ -55,6 +62,16 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:file_extensions](https://
+## Mappings
+
+| Mapping Type | Mapped Value |
+| --- | --- |
+| self | https://w3id.org/bridge2ai/standards-schema-all/:file_extensions |
+| native | https://w3id.org/bridge2ai/standards-schema-all/:file_extensions |
+
+
+
+
## LinkML Source
@@ -65,11 +82,11 @@ from_schema: https://w3id.org/bridge2ai/standards-schema-all
rank: 1000
is_a: node_property
domain: NamedThing
-multivalued: true
alias: file_extensions
domain_of:
- DataSubstrate
range: string
+multivalued: true
```
\ No newline at end of file
diff --git a/docs/formal_specification.md b/docs/formal_specification.md
index 8a4fd6d..1f420bb 100644
--- a/docs/formal_specification.md
+++ b/docs/formal_specification.md
@@ -1,7 +1,14 @@
+
+
# Slot: formal_specification
+
+
_Relevant code repository or other location for a formal specification of the standard or tool. Often a URL, particularly to a Git repository._
+
+
+
URI: [https://w3id.org/bridge2ai/standards-schema-all/:formal_specification](https://w3id.org/bridge2ai/standards-schema-all/:formal_specification)
@@ -16,20 +23,22 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:formal_specification](htt
+
## Applicable Classes
-| Name | Description |
-| --- | --- |
-[DataStandardOrTool](DataStandardOrTool.md) | Represents a standard or tool in the Bridge2AI Standards Registry
-[DataStandard](DataStandard.md) | Represents a general purpose standard in the Bridge2AI Standards Registry
-[BiomedicalStandard](BiomedicalStandard.md) | Represents a standard in the Bridge2AI Standards Registry with particular app...
-[Registry](Registry.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a...
-[OntologyOrVocabulary](OntologyOrVocabulary.md) | A set of concepts and categories, potentially defined or accompanied by their...
-[ModelRepository](ModelRepository.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a...
-[ReferenceDataOrDataset](ReferenceDataOrDataset.md) | Represents a resource in the Bridge2AI Standards Registry serving as a standa...
-[SoftwareOrTool](SoftwareOrTool.md) | Represents a piece of software or computational tool in the Bridge2AI Standar...
-[ReferenceImplementation](ReferenceImplementation.md) | Represents an implementation of one or more standards or tools in the Bridge2...
-[TrainingProgram](TrainingProgram.md) | Represents a training program for skills and experience related to standards ...
+| Name | Description | Modifies Slot |
+| --- | --- | --- |
+| [DataStandard](DataStandard.md) | Represents a general purpose standard in the Bridge2AI Standards Registry | no |
+| [ReferenceDataOrDataset](ReferenceDataOrDataset.md) | Represents a resource in the Bridge2AI Standards Registry serving as a standa... | no |
+| [Registry](Registry.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a... | no |
+| [OntologyOrVocabulary](OntologyOrVocabulary.md) | A set of concepts and categories, potentially defined or accompanied by their... | no |
+| [BiomedicalStandard](BiomedicalStandard.md) | Represents a standard in the Bridge2AI Standards Registry with particular app... | no |
+| [ModelRepository](ModelRepository.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a... | no |
+| [DataStandardOrTool](DataStandardOrTool.md) | Represents a standard or tool in the Bridge2AI Standards Registry | no |
+| [TrainingProgram](TrainingProgram.md) | Represents a training program for skills and experience related to standards ... | no |
+| [SoftwareOrTool](SoftwareOrTool.md) | Represents a piece of software or computational tool in the Bridge2AI Standar... | no |
+| [ReferenceImplementation](ReferenceImplementation.md) | Represents an implementation of one or more standards or tools in the Bridge2... | no |
+
@@ -44,8 +53,6 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:formal_specification](htt
-
-
## Identifier and Mapping Information
@@ -62,6 +69,16 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:formal_specification](htt
+## Mappings
+
+| Mapping Type | Mapped Value |
+| --- | --- |
+| self | https://w3id.org/bridge2ai/standards-schema-all/:formal_specification |
+| native | https://w3id.org/bridge2ai/standards-schema-all/:formal_specification |
+
+
+
+
## LinkML Source
diff --git a/docs/has_relevant_organization.md b/docs/has_relevant_organization.md
index 6e9fdb4..76cbb77 100644
--- a/docs/has_relevant_organization.md
+++ b/docs/has_relevant_organization.md
@@ -1,7 +1,14 @@
+
+
# Slot: has_relevant_organization
+
+
_Subject standard is managed or otherwise guided buy the object organization(s)._
+
+
+
URI: [https://w3id.org/bridge2ai/standards-schema-all/:has_relevant_organization](https://w3id.org/bridge2ai/standards-schema-all/:has_relevant_organization)
@@ -16,20 +23,22 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:has_relevant_organization
+
## Applicable Classes
-| Name | Description |
-| --- | --- |
-[DataStandardOrTool](DataStandardOrTool.md) | Represents a standard or tool in the Bridge2AI Standards Registry
-[DataStandard](DataStandard.md) | Represents a general purpose standard in the Bridge2AI Standards Registry
-[BiomedicalStandard](BiomedicalStandard.md) | Represents a standard in the Bridge2AI Standards Registry with particular app...
-[Registry](Registry.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a...
-[OntologyOrVocabulary](OntologyOrVocabulary.md) | A set of concepts and categories, potentially defined or accompanied by their...
-[ModelRepository](ModelRepository.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a...
-[ReferenceDataOrDataset](ReferenceDataOrDataset.md) | Represents a resource in the Bridge2AI Standards Registry serving as a standa...
-[SoftwareOrTool](SoftwareOrTool.md) | Represents a piece of software or computational tool in the Bridge2AI Standar...
-[ReferenceImplementation](ReferenceImplementation.md) | Represents an implementation of one or more standards or tools in the Bridge2...
-[TrainingProgram](TrainingProgram.md) | Represents a training program for skills and experience related to standards ...
+| Name | Description | Modifies Slot |
+| --- | --- | --- |
+| [DataStandard](DataStandard.md) | Represents a general purpose standard in the Bridge2AI Standards Registry | no |
+| [ReferenceDataOrDataset](ReferenceDataOrDataset.md) | Represents a resource in the Bridge2AI Standards Registry serving as a standa... | no |
+| [Registry](Registry.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a... | no |
+| [OntologyOrVocabulary](OntologyOrVocabulary.md) | A set of concepts and categories, potentially defined or accompanied by their... | no |
+| [BiomedicalStandard](BiomedicalStandard.md) | Represents a standard in the Bridge2AI Standards Registry with particular app... | no |
+| [ModelRepository](ModelRepository.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a... | no |
+| [DataStandardOrTool](DataStandardOrTool.md) | Represents a standard or tool in the Bridge2AI Standards Registry | no |
+| [TrainingProgram](TrainingProgram.md) | Represents a training program for skills and experience related to standards ... | no |
+| [SoftwareOrTool](SoftwareOrTool.md) | Represents a piece of software or computational tool in the Bridge2AI Standar... | no |
+| [ReferenceImplementation](ReferenceImplementation.md) | Represents an implementation of one or more standards or tools in the Bridge2... | no |
+
@@ -39,10 +48,8 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:has_relevant_organization
## Properties
* Range: [Organization](Organization.md)
-* Multivalued: True
-
-
+* Multivalued: True
@@ -64,6 +71,16 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:has_relevant_organization
+## Mappings
+
+| Mapping Type | Mapped Value |
+| --- | --- |
+| self | https://w3id.org/bridge2ai/standards-schema-all/:has_relevant_organization |
+| native | https://w3id.org/bridge2ai/standards-schema-all/:has_relevant_organization |
+
+
+
+
## LinkML Source
@@ -74,12 +91,12 @@ from_schema: https://w3id.org/bridge2ai/standards-schema-all
rank: 1000
is_a: related_to
domain: DataStandardOrTool
-multivalued: true
inherited: true
alias: has_relevant_organization
domain_of:
- DataStandardOrTool
range: Organization
+multivalued: true
```
\ No newline at end of file
diff --git a/docs/has_training_resource.md b/docs/has_training_resource.md
new file mode 100644
index 0000000..99c6c77
--- /dev/null
+++ b/docs/has_training_resource.md
@@ -0,0 +1,102 @@
+
+
+# Slot: has_training_resource
+
+
+_Relevant training resources, standard usage manuals, or other documentation for the standard or tool._
+
+
+
+
+
+URI: [https://w3id.org/bridge2ai/standards-schema-all/:has_training_resource](https://w3id.org/bridge2ai/standards-schema-all/:has_training_resource)
+
+
+
+
+## Inheritance
+
+* [node_property](node_property.md)
+ * **has_training_resource**
+
+
+
+
+
+
+## Applicable Classes
+
+| Name | Description | Modifies Slot |
+| --- | --- | --- |
+| [DataStandard](DataStandard.md) | Represents a general purpose standard in the Bridge2AI Standards Registry | no |
+| [ReferenceDataOrDataset](ReferenceDataOrDataset.md) | Represents a resource in the Bridge2AI Standards Registry serving as a standa... | no |
+| [Registry](Registry.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a... | no |
+| [OntologyOrVocabulary](OntologyOrVocabulary.md) | A set of concepts and categories, potentially defined or accompanied by their... | no |
+| [BiomedicalStandard](BiomedicalStandard.md) | Represents a standard in the Bridge2AI Standards Registry with particular app... | no |
+| [ModelRepository](ModelRepository.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a... | no |
+| [DataStandardOrTool](DataStandardOrTool.md) | Represents a standard or tool in the Bridge2AI Standards Registry | no |
+| [TrainingProgram](TrainingProgram.md) | Represents a training program for skills and experience related to standards ... | no |
+| [SoftwareOrTool](SoftwareOrTool.md) | Represents a piece of software or computational tool in the Bridge2AI Standar... | no |
+| [ReferenceImplementation](ReferenceImplementation.md) | Represents an implementation of one or more standards or tools in the Bridge2... | no |
+
+
+
+
+
+
+
+## Properties
+
+* Range: [DataStandardOrTool](DataStandardOrTool.md)
+
+* Multivalued: True
+
+
+
+
+
+## Identifier and Mapping Information
+
+
+
+
+
+
+
+### Schema Source
+
+
+* from schema: https://w3id.org/bridge2ai/standards-schema-all
+
+
+
+
+## Mappings
+
+| Mapping Type | Mapped Value |
+| --- | --- |
+| self | https://w3id.org/bridge2ai/standards-schema-all/:has_training_resource |
+| native | https://w3id.org/bridge2ai/standards-schema-all/:has_training_resource |
+
+
+
+
+## LinkML Source
+
+
+```yaml
+name: has_training_resource
+description: Relevant training resources, standard usage manuals, or other documentation
+ for the standard or tool.
+from_schema: https://w3id.org/bridge2ai/standards-schema-all
+rank: 1000
+is_a: node_property
+domain: NamedThing
+alias: has_training_resource
+domain_of:
+- DataStandardOrTool
+range: DataStandardOrTool
+multivalued: true
+
+```
+
\ No newline at end of file
diff --git a/docs/id.md b/docs/id.md
index 6494ce0..a4e265a 100644
--- a/docs/id.md
+++ b/docs/id.md
@@ -1,7 +1,14 @@
+
+
# Slot: id
+
+
_A unique identifier for a thing._
+
+
+
URI: [schema:identifier](http://schema.org/identifier)
@@ -11,26 +18,28 @@ URI: [schema:identifier](http://schema.org/identifier)
+
## Applicable Classes
-| Name | Description |
-| --- | --- |
-[NamedThing](NamedThing.md) | A generic grouping for any identifiable entity
-[UseCase](UseCase.md) | Represents a use case for Bridge2AI standards
-[DataStandardOrTool](DataStandardOrTool.md) | Represents a standard or tool in the Bridge2AI Standards Registry
-[DataStandard](DataStandard.md) | Represents a general purpose standard in the Bridge2AI Standards Registry
-[BiomedicalStandard](BiomedicalStandard.md) | Represents a standard in the Bridge2AI Standards Registry with particular app...
-[Registry](Registry.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a...
-[OntologyOrVocabulary](OntologyOrVocabulary.md) | A set of concepts and categories, potentially defined or accompanied by their...
-[ModelRepository](ModelRepository.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a...
-[ReferenceDataOrDataset](ReferenceDataOrDataset.md) | Represents a resource in the Bridge2AI Standards Registry serving as a standa...
-[SoftwareOrTool](SoftwareOrTool.md) | Represents a piece of software or computational tool in the Bridge2AI Standar...
-[ReferenceImplementation](ReferenceImplementation.md) | Represents an implementation of one or more standards or tools in the Bridge2...
-[TrainingProgram](TrainingProgram.md) | Represents a training program for skills and experience related to standards ...
-[DataTopic](DataTopic.md) | Represents a general data topic for Bridge2AI data or the tools/standards app...
-[AnatomicalEntity](AnatomicalEntity.md) | A subcellular location, cell type or gross anatomical part
-[Organization](Organization.md) | Represents a group or organization related to or responsible for one or more ...
-[DataSubstrate](DataSubstrate.md) | Represents a data substrate for Bridge2AI data
+| Name | Description | Modifies Slot |
+| --- | --- | --- |
+| [AnatomicalEntity](AnatomicalEntity.md) | A subcellular location, cell type or gross anatomical part | no |
+| [DataStandard](DataStandard.md) | Represents a general purpose standard in the Bridge2AI Standards Registry | no |
+| [ReferenceDataOrDataset](ReferenceDataOrDataset.md) | Represents a resource in the Bridge2AI Standards Registry serving as a standa... | no |
+| [Registry](Registry.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a... | no |
+| [OntologyOrVocabulary](OntologyOrVocabulary.md) | A set of concepts and categories, potentially defined or accompanied by their... | no |
+| [BiomedicalStandard](BiomedicalStandard.md) | Represents a standard in the Bridge2AI Standards Registry with particular app... | no |
+| [ModelRepository](ModelRepository.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a... | no |
+| [UseCase](UseCase.md) | Represents a use case for Bridge2AI standards | no |
+| [DataStandardOrTool](DataStandardOrTool.md) | Represents a standard or tool in the Bridge2AI Standards Registry | no |
+| [DataTopic](DataTopic.md) | Represents a general data topic for Bridge2AI data or the tools/standards app... | no |
+| [NamedThing](NamedThing.md) | A generic grouping for any identifiable entity | no |
+| [TrainingProgram](TrainingProgram.md) | Represents a training program for skills and experience related to standards ... | no |
+| [DataSubstrate](DataSubstrate.md) | Represents a data substrate for Bridge2AI data | no |
+| [SoftwareOrTool](SoftwareOrTool.md) | Represents a piece of software or computational tool in the Bridge2AI Standar... | no |
+| [Organization](Organization.md) | Represents a group or organization related to or responsible for one or more ... | no |
+| [ReferenceImplementation](ReferenceImplementation.md) | Represents an implementation of one or more standards or tools in the Bridge2... | no |
+
@@ -40,10 +49,8 @@ URI: [schema:identifier](http://schema.org/identifier)
## Properties
* Range: [Uriorcurie](Uriorcurie.md)
-* Required: True
-
-
+* Required: True
@@ -65,6 +72,16 @@ URI: [schema:identifier](http://schema.org/identifier)
+## Mappings
+
+| Mapping Type | Mapped Value |
+| --- | --- |
+| self | schema:identifier |
+| native | https://w3id.org/bridge2ai/standards-schema-all/:id |
+
+
+
+
## LinkML Source
diff --git a/docs/index.md b/docs/index.md
index 848afe8..82ade6e 100644
--- a/docs/index.md
+++ b/docs/index.md
@@ -3,6 +3,7 @@
High-level classes for Bridge2AI Standards schemas.
URI: https://w3id.org/bridge2ai/standards-schema-all
+
Name: standards-schema-all
@@ -11,27 +12,28 @@ Name: standards-schema-all
| Class | Description |
| --- | --- |
-| [AnatomicalEntity](AnatomicalEntity.md) | A subcellular location, cell type or gross anatomical part |
-| [BiomedicalStandard](BiomedicalStandard.md) | Represents a standard in the Bridge2AI Standards Registry with particular app... |
-| [DataStandard](DataStandard.md) | Represents a general purpose standard in the Bridge2AI Standards Registry |
-| [DataStandardOrTool](DataStandardOrTool.md) | Represents a standard or tool in the Bridge2AI Standards Registry |
-| [DataStandardOrToolContainer](DataStandardOrToolContainer.md) | A container for DataStandardOrTool(s) |
-| [DataSubstrate](DataSubstrate.md) | Represents a data substrate for Bridge2AI data |
-| [DataSubstrateContainer](DataSubstrateContainer.md) | A container for DataSubstrates |
-| [DataTopic](DataTopic.md) | Represents a general data topic for Bridge2AI data or the tools/standards app... |
-| [DataTopicContainer](DataTopicContainer.md) | A container for DataTopics |
-| [ModelRepository](ModelRepository.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a... |
+| [DataStandardOrToolContainer](DataStandardOrToolContainer.md) | A container for DataStandardOrTool(s). |
+| [DataSubstrateContainer](DataSubstrateContainer.md) | A container for DataSubstrates. |
+| [DataTopicContainer](DataTopicContainer.md) | A container for DataTopics. |
| [NamedThing](NamedThing.md) | A generic grouping for any identifiable entity |
-| [OntologyOrVocabulary](OntologyOrVocabulary.md) | A set of concepts and categories, potentially defined or accompanied by their... |
-| [Organization](Organization.md) | Represents a group or organization related to or responsible for one or more ... |
-| [OrganizationContainer](OrganizationContainer.md) | A container for Organizations |
-| [ReferenceDataOrDataset](ReferenceDataOrDataset.md) | Represents a resource in the Bridge2AI Standards Registry serving as a standa... |
-| [ReferenceImplementation](ReferenceImplementation.md) | Represents an implementation of one or more standards or tools in the Bridge2... |
-| [Registry](Registry.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a... |
-| [SoftwareOrTool](SoftwareOrTool.md) | Represents a piece of software or computational tool in the Bridge2AI Standar... |
-| [TrainingProgram](TrainingProgram.md) | Represents a training program for skills and experience related to standards ... |
-| [UseCase](UseCase.md) | Represents a use case for Bridge2AI standards |
-| [UseCaseContainer](UseCaseContainer.md) | A container for UseCase |
+| [AnatomicalEntity](AnatomicalEntity.md) | A subcellular location, cell type or gross anatomical part |
+| [DataStandardOrTool](DataStandardOrTool.md) | Represents a standard or tool in the Bridge2AI Standards Registry. |
+| [DataStandard](DataStandard.md) | Represents a general purpose standard in the Bridge2AI Standards Registry. |
+| [BiomedicalStandard](BiomedicalStandard.md) | Represents a standard in the Bridge2AI Standards Registry with particular applications or relevance to clinical or biomedical research purposes. |
+| [ModelRepository](ModelRepository.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate and store computational models. To be a repository, the resource must not index models alone. |
+| [OntologyOrVocabulary](OntologyOrVocabulary.md) | A set of concepts and categories, potentially defined or accompanied by their hierarchical relationships. |
+| [ReferenceDataOrDataset](ReferenceDataOrDataset.md) | Represents a resource in the Bridge2AI Standards Registry serving as a standardized, reusable data source. |
+| [ReferenceImplementation](ReferenceImplementation.md) | Represents an implementation of one or more standards or tools in the Bridge2AI Standards Registry, whether as a full specification in a particular language or as an application to a specific use case. |
+| [Registry](Registry.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate and/or index other resources. |
+| [SoftwareOrTool](SoftwareOrTool.md) | Represents a piece of software or computational tool in the Bridge2AI Standards Registry. |
+| [TrainingProgram](TrainingProgram.md) | Represents a training program for skills and experience related to standards or tools in the Bridge2AI Standards Registry. |
+| [DataSubstrate](DataSubstrate.md) | Represents a data substrate for Bridge2AI data. This may be a high-level data structure or a specific implementation of that structure. Interpret as "data, in this form or format", as compared to DataStandard, which refers to the set of rules defining a standard. For example, data in TSV format is represented as a DataSubstrate but the concept of TSV format is a DataStandard. |
+| [DataTopic](DataTopic.md) | Represents a general data topic for Bridge2AI data or the tools/standards applied to the data. |
+| [Organization](Organization.md) | Represents a group or organization related to or responsible for one or more Bridge2AI standards. |
+| [UseCase](UseCase.md) | Represents a use case for Bridge2AI standards. |
+| [OrganizationContainer](OrganizationContainer.md) | A container for Organizations. |
+| [UseCaseContainer](UseCaseContainer.md) | A container for UseCase. |
+
## Slots
@@ -57,6 +59,7 @@ Name: standards-schema-all
| [file_extensions](file_extensions.md) | Commonly used file extensions for this substrate |
| [formal_specification](formal_specification.md) | Relevant code repository or other location for a formal specification of the ... |
| [has_relevant_organization](has_relevant_organization.md) | Subject standard is managed or otherwise guided buy the object organization(s... |
+| [has_training_resource](has_training_resource.md) | Relevant training resources, standard usage manuals, or other documentation f... |
| [id](id.md) | A unique identifier for a thing |
| [involved_in_experimental_design](involved_in_experimental_design.md) | True if use case is likely to be implemented as part of an experimental proce... |
| [involved_in_metadata_management](involved_in_metadata_management.md) | True if use case is likely to be implemented as part of metadata indexing, sa... |
@@ -75,7 +78,7 @@ Name: standards-schema-all
| [purpose_detail](purpose_detail.md) | Text description of the standard or tool |
| [related_to](related_to.md) | A relationship that is asserted between two named things |
| [relevance_to_dgps](relevance_to_dgps.md) | Relevance of the use case to one or more DGPs |
-| [requires_registration](requires_registration.md) | Does usage of the standard or tool require registrion of a user or group with... |
+| [requires_registration](requires_registration.md) | Does usage of the standard or tool require registration of a user or group wi... |
| [ror_id](ror_id.md) | Unique ROR identifier |
| [standards_and_tools_for_dgp_use](standards_and_tools_for_dgp_use.md) | List of identifiers of standards and tools; those planned to be used, or alre... |
| [subclass_of](subclass_of.md) | Holds between two classes where the domain class is a specialization of the r... |
@@ -113,12 +116,15 @@ Name: standards-schema-all
| [EdamIdentifier](EdamIdentifier.md) | Identifier from EDAM ontology |
| [Float](Float.md) | A real number that conforms to the xsd:float specification |
| [Integer](Integer.md) | An integer |
+| [Jsonpath](Jsonpath.md) | A string encoding a JSON Path |
+| [Jsonpointer](Jsonpointer.md) | A string encoding a JSON Pointer |
| [MeshIdentifier](MeshIdentifier.md) | Identifier from Medical Subject Headings (MeSH) biomedical vocabulary |
| [NcitIdentifier](NcitIdentifier.md) | Identifier from NCIT reference terminology with broad coverage of the cancer ... |
| [Ncname](Ncname.md) | Prefix part of CURIE |
| [Nodeidentifier](Nodeidentifier.md) | A URI, CURIE or BNODE that represents a node in a model |
| [Objectidentifier](Objectidentifier.md) | A URI or CURIE that represents an object in the model |
| [RorIdentifier](RorIdentifier.md) | Identifier from Research Organization Registry |
+| [Sparqlpath](Sparqlpath.md) | A string encoding a SPARQL Property Path |
| [String](String.md) | A character string |
| [Time](Time.md) | A time object represents a (local) time of day, independent of any particular... |
| [Uri](Uri.md) | a complete URI |
diff --git a/docs/involved_in_experimental_design.md b/docs/involved_in_experimental_design.md
index 924d424..6252034 100644
--- a/docs/involved_in_experimental_design.md
+++ b/docs/involved_in_experimental_design.md
@@ -1,7 +1,14 @@
+
+
# Slot: involved_in_experimental_design
+
+
_True if use case is likely to be implemented as part of an experimental procedure or collection of data to be used as part of an experiment._
+
+
+
URI: [https://w3id.org/bridge2ai/standards-schema-all/:involved_in_experimental_design](https://w3id.org/bridge2ai/standards-schema-all/:involved_in_experimental_design)
@@ -16,11 +23,13 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:involved_in_experimental_
+
## Applicable Classes
-| Name | Description |
-| --- | --- |
-[UseCase](UseCase.md) | Represents a use case for Bridge2AI standards
+| Name | Description | Modifies Slot |
+| --- | --- | --- |
+| [UseCase](UseCase.md) | Represents a use case for Bridge2AI standards | no |
+
@@ -35,8 +44,6 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:involved_in_experimental_
-
-
## Identifier and Mapping Information
@@ -53,6 +60,16 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:involved_in_experimental_
+## Mappings
+
+| Mapping Type | Mapped Value |
+| --- | --- |
+| self | https://w3id.org/bridge2ai/standards-schema-all/:involved_in_experimental_design |
+| native | https://w3id.org/bridge2ai/standards-schema-all/:involved_in_experimental_design |
+
+
+
+
## LinkML Source
diff --git a/docs/involved_in_metadata_management.md b/docs/involved_in_metadata_management.md
index a6af597..0050885 100644
--- a/docs/involved_in_metadata_management.md
+++ b/docs/involved_in_metadata_management.md
@@ -1,7 +1,14 @@
+
+
# Slot: involved_in_metadata_management
+
+
_True if use case is likely to be implemented as part of metadata indexing, sample tracking, or any other storage of high-level data properties. Includes use cases in which metadata will be collected along with data._
+
+
+
URI: [https://w3id.org/bridge2ai/standards-schema-all/:involved_in_metadata_management](https://w3id.org/bridge2ai/standards-schema-all/:involved_in_metadata_management)
@@ -16,11 +23,13 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:involved_in_metadata_mana
+
## Applicable Classes
-| Name | Description |
-| --- | --- |
-[UseCase](UseCase.md) | Represents a use case for Bridge2AI standards
+| Name | Description | Modifies Slot |
+| --- | --- | --- |
+| [UseCase](UseCase.md) | Represents a use case for Bridge2AI standards | no |
+
@@ -35,8 +44,6 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:involved_in_metadata_mana
-
-
## Identifier and Mapping Information
@@ -53,6 +60,16 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:involved_in_metadata_mana
+## Mappings
+
+| Mapping Type | Mapped Value |
+| --- | --- |
+| self | https://w3id.org/bridge2ai/standards-schema-all/:involved_in_metadata_management |
+| native | https://w3id.org/bridge2ai/standards-schema-all/:involved_in_metadata_management |
+
+
+
+
## LinkML Source
diff --git a/docs/involved_in_quality_control.md b/docs/involved_in_quality_control.md
index 2e0cf0c..497634c 100644
--- a/docs/involved_in_quality_control.md
+++ b/docs/involved_in_quality_control.md
@@ -1,7 +1,14 @@
+
+
# Slot: involved_in_quality_control
+
+
_True is use case is likely to be implemented as part of data validation operations._
+
+
+
URI: [https://w3id.org/bridge2ai/standards-schema-all/:involved_in_quality_control](https://w3id.org/bridge2ai/standards-schema-all/:involved_in_quality_control)
@@ -16,11 +23,13 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:involved_in_quality_contr
+
## Applicable Classes
-| Name | Description |
-| --- | --- |
-[UseCase](UseCase.md) | Represents a use case for Bridge2AI standards
+| Name | Description | Modifies Slot |
+| --- | --- | --- |
+| [UseCase](UseCase.md) | Represents a use case for Bridge2AI standards | no |
+
@@ -35,8 +44,6 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:involved_in_quality_contr
-
-
## Identifier and Mapping Information
@@ -53,6 +60,16 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:involved_in_quality_contr
+## Mappings
+
+| Mapping Type | Mapped Value |
+| --- | --- |
+| self | https://w3id.org/bridge2ai/standards-schema-all/:involved_in_quality_control |
+| native | https://w3id.org/bridge2ai/standards-schema-all/:involved_in_quality_control |
+
+
+
+
## LinkML Source
diff --git a/docs/is_open.md b/docs/is_open.md
index 8c6f79c..ad876e0 100644
--- a/docs/is_open.md
+++ b/docs/is_open.md
@@ -1,7 +1,14 @@
+
+
# Slot: is_open
+
+
_Is the standard or tool FAIR and available free of cost?_
+
+
+
URI: [https://w3id.org/bridge2ai/standards-schema-all/:is_open](https://w3id.org/bridge2ai/standards-schema-all/:is_open)
@@ -16,20 +23,22 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:is_open](https://w3id.org
+
## Applicable Classes
-| Name | Description |
-| --- | --- |
-[DataStandardOrTool](DataStandardOrTool.md) | Represents a standard or tool in the Bridge2AI Standards Registry
-[DataStandard](DataStandard.md) | Represents a general purpose standard in the Bridge2AI Standards Registry
-[BiomedicalStandard](BiomedicalStandard.md) | Represents a standard in the Bridge2AI Standards Registry with particular app...
-[Registry](Registry.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a...
-[OntologyOrVocabulary](OntologyOrVocabulary.md) | A set of concepts and categories, potentially defined or accompanied by their...
-[ModelRepository](ModelRepository.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a...
-[ReferenceDataOrDataset](ReferenceDataOrDataset.md) | Represents a resource in the Bridge2AI Standards Registry serving as a standa...
-[SoftwareOrTool](SoftwareOrTool.md) | Represents a piece of software or computational tool in the Bridge2AI Standar...
-[ReferenceImplementation](ReferenceImplementation.md) | Represents an implementation of one or more standards or tools in the Bridge2...
-[TrainingProgram](TrainingProgram.md) | Represents a training program for skills and experience related to standards ...
+| Name | Description | Modifies Slot |
+| --- | --- | --- |
+| [DataStandard](DataStandard.md) | Represents a general purpose standard in the Bridge2AI Standards Registry | no |
+| [ReferenceDataOrDataset](ReferenceDataOrDataset.md) | Represents a resource in the Bridge2AI Standards Registry serving as a standa... | no |
+| [Registry](Registry.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a... | no |
+| [OntologyOrVocabulary](OntologyOrVocabulary.md) | A set of concepts and categories, potentially defined or accompanied by their... | no |
+| [BiomedicalStandard](BiomedicalStandard.md) | Represents a standard in the Bridge2AI Standards Registry with particular app... | no |
+| [ModelRepository](ModelRepository.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a... | no |
+| [DataStandardOrTool](DataStandardOrTool.md) | Represents a standard or tool in the Bridge2AI Standards Registry | no |
+| [TrainingProgram](TrainingProgram.md) | Represents a training program for skills and experience related to standards ... | no |
+| [SoftwareOrTool](SoftwareOrTool.md) | Represents a piece of software or computational tool in the Bridge2AI Standar... | no |
+| [ReferenceImplementation](ReferenceImplementation.md) | Represents an implementation of one or more standards or tools in the Bridge2... | no |
+
@@ -44,8 +53,6 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:is_open](https://w3id.org
-
-
## Identifier and Mapping Information
@@ -62,6 +69,16 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:is_open](https://w3id.org
+## Mappings
+
+| Mapping Type | Mapped Value |
+| --- | --- |
+| self | https://w3id.org/bridge2ai/standards-schema-all/:is_open |
+| native | https://w3id.org/bridge2ai/standards-schema-all/:is_open |
+
+
+
+
## LinkML Source
diff --git a/docs/known_limitations.md b/docs/known_limitations.md
index 593aeee..582a89b 100644
--- a/docs/known_limitations.md
+++ b/docs/known_limitations.md
@@ -1,7 +1,14 @@
+
+
# Slot: known_limitations
+
+
_Any current obstacles to implementing this use case. This could be a selection from one or more predefined categories including lack of standards, lack of relevant patient cohort, lack of funding, etc._
+
+
+
URI: [https://w3id.org/bridge2ai/standards-schema-all/:known_limitations](https://w3id.org/bridge2ai/standards-schema-all/:known_limitations)
@@ -16,11 +23,13 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:known_limitations](https:
+
## Applicable Classes
-| Name | Description |
-| --- | --- |
-[UseCase](UseCase.md) | Represents a use case for Bridge2AI standards
+| Name | Description | Modifies Slot |
+| --- | --- | --- |
+| [UseCase](UseCase.md) | Represents a use case for Bridge2AI standards | no |
+
@@ -35,8 +44,6 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:known_limitations](https:
-
-
## Identifier and Mapping Information
@@ -53,6 +60,16 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:known_limitations](https:
+## Mappings
+
+| Mapping Type | Mapped Value |
+| --- | --- |
+| self | https://w3id.org/bridge2ai/standards-schema-all/:known_limitations |
+| native | https://w3id.org/bridge2ai/standards-schema-all/:known_limitations |
+
+
+
+
## LinkML Source
diff --git a/docs/limitations.md b/docs/limitations.md
index 25c2497..31ec71f 100644
--- a/docs/limitations.md
+++ b/docs/limitations.md
@@ -1,7 +1,14 @@
+
+
# Slot: limitations
+
+
_Potential obstacles particular to this substrate or implementation. _
+
+
+
URI: [https://w3id.org/bridge2ai/standards-schema-all/:limitations](https://w3id.org/bridge2ai/standards-schema-all/:limitations)
@@ -16,11 +23,13 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:limitations](https://w3id
+
## Applicable Classes
-| Name | Description |
-| --- | --- |
-[DataSubstrate](DataSubstrate.md) | Represents a data substrate for Bridge2AI data
+| Name | Description | Modifies Slot |
+| --- | --- | --- |
+| [DataSubstrate](DataSubstrate.md) | Represents a data substrate for Bridge2AI data | no |
+
@@ -30,10 +39,8 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:limitations](https://w3id
## Properties
* Range: [String](String.md)
-* Multivalued: True
-
-
+* Multivalued: True
@@ -55,6 +62,16 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:limitations](https://w3id
+## Mappings
+
+| Mapping Type | Mapped Value |
+| --- | --- |
+| self | https://w3id.org/bridge2ai/standards-schema-all/:limitations |
+| native | https://w3id.org/bridge2ai/standards-schema-all/:limitations |
+
+
+
+
## LinkML Source
@@ -65,11 +82,11 @@ from_schema: https://w3id.org/bridge2ai/standards-schema-all
rank: 1000
is_a: node_property
domain: NamedThing
-multivalued: true
alias: limitations
domain_of:
- DataSubstrate
range: string
+multivalued: true
```
\ No newline at end of file
diff --git a/docs/mesh_id.md b/docs/mesh_id.md
index 7f7ffe1..9d76151 100644
--- a/docs/mesh_id.md
+++ b/docs/mesh_id.md
@@ -1,7 +1,14 @@
+
+
# Slot: mesh_id
+
+
_Unique MeSH identifier_
+
+
+
URI: [https://w3id.org/bridge2ai/standards-schema-all/:mesh_id](https://w3id.org/bridge2ai/standards-schema-all/:mesh_id)
@@ -11,12 +18,14 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:mesh_id](https://w3id.org
+
## Applicable Classes
-| Name | Description |
-| --- | --- |
-[DataTopic](DataTopic.md) | Represents a general data topic for Bridge2AI data or the tools/standards app...
-[DataSubstrate](DataSubstrate.md) | Represents a data substrate for Bridge2AI data
+| Name | Description | Modifies Slot |
+| --- | --- | --- |
+| [DataTopic](DataTopic.md) | Represents a general data topic for Bridge2AI data or the tools/standards app... | no |
+| [DataSubstrate](DataSubstrate.md) | Represents a data substrate for Bridge2AI data | no |
+
@@ -32,8 +41,6 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:mesh_id](https://w3id.org
-
-
## Examples
| Value |
@@ -56,6 +63,16 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:mesh_id](https://w3id.org
+## Mappings
+
+| Mapping Type | Mapped Value |
+| --- | --- |
+| self | https://w3id.org/bridge2ai/standards-schema-all/:mesh_id |
+| native | https://w3id.org/bridge2ai/standards-schema-all/:mesh_id |
+
+
+
+
## LinkML Source
@@ -70,8 +87,8 @@ values_from:
- MeSH
alias: mesh_id
domain_of:
-- DataTopic
- DataSubstrate
+- DataTopic
range: mesh_identifier
```
diff --git a/docs/metadata_storage.md b/docs/metadata_storage.md
index 437fbef..05ab566 100644
--- a/docs/metadata_storage.md
+++ b/docs/metadata_storage.md
@@ -1,7 +1,14 @@
+
+
# Slot: metadata_storage
+
+
_Data Substrate in which metadata is stored._
+
+
+
URI: [https://w3id.org/bridge2ai/standards-schema-all/:metadata_storage](https://w3id.org/bridge2ai/standards-schema-all/:metadata_storage)
@@ -16,24 +23,24 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:metadata_storage](https:/
-## Applicable Classes
-| Name | Description |
-| --- | --- |
-[DataSubstrate](DataSubstrate.md) | Represents a data substrate for Bridge2AI data
+## Applicable Classes
+| Name | Description | Modifies Slot |
+| --- | --- | --- |
+| [DataSubstrate](DataSubstrate.md) | Represents a data substrate for Bridge2AI data | no |
-## Properties
-* Range: [String](String.md)
-* Multivalued: True
+## Properties
+* Range: [String](String.md) or
[DataSubstrate](DataSubstrate.md)
+* Multivalued: True
@@ -55,6 +62,16 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:metadata_storage](https:/
+## Mappings
+
+| Mapping Type | Mapped Value |
+| --- | --- |
+| self | https://w3id.org/bridge2ai/standards-schema-all/:metadata_storage |
+| native | https://w3id.org/bridge2ai/standards-schema-all/:metadata_storage |
+
+
+
+
## LinkML Source
@@ -65,11 +82,11 @@ from_schema: https://w3id.org/bridge2ai/standards-schema-all
rank: 1000
is_a: node_property
domain: NamedThing
-multivalued: true
alias: metadata_storage
domain_of:
- DataSubstrate
range: string
+multivalued: true
any_of:
- range: DataSubstrate
- equals_string: file headers
diff --git a/docs/name.md b/docs/name.md
index f0ccf60..01f1b0d 100644
--- a/docs/name.md
+++ b/docs/name.md
@@ -1,7 +1,14 @@
+
+
# Slot: name
+
+
_A human-readable name for a thing._
+
+
+
URI: [schema:name](http://schema.org/name)
@@ -11,26 +18,28 @@ URI: [schema:name](http://schema.org/name)
+
## Applicable Classes
-| Name | Description |
-| --- | --- |
-[NamedThing](NamedThing.md) | A generic grouping for any identifiable entity
-[UseCase](UseCase.md) | Represents a use case for Bridge2AI standards
-[DataStandardOrTool](DataStandardOrTool.md) | Represents a standard or tool in the Bridge2AI Standards Registry
-[DataStandard](DataStandard.md) | Represents a general purpose standard in the Bridge2AI Standards Registry
-[BiomedicalStandard](BiomedicalStandard.md) | Represents a standard in the Bridge2AI Standards Registry with particular app...
-[Registry](Registry.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a...
-[OntologyOrVocabulary](OntologyOrVocabulary.md) | A set of concepts and categories, potentially defined or accompanied by their...
-[ModelRepository](ModelRepository.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a...
-[ReferenceDataOrDataset](ReferenceDataOrDataset.md) | Represents a resource in the Bridge2AI Standards Registry serving as a standa...
-[SoftwareOrTool](SoftwareOrTool.md) | Represents a piece of software or computational tool in the Bridge2AI Standar...
-[ReferenceImplementation](ReferenceImplementation.md) | Represents an implementation of one or more standards or tools in the Bridge2...
-[TrainingProgram](TrainingProgram.md) | Represents a training program for skills and experience related to standards ...
-[DataTopic](DataTopic.md) | Represents a general data topic for Bridge2AI data or the tools/standards app...
-[AnatomicalEntity](AnatomicalEntity.md) | A subcellular location, cell type or gross anatomical part
-[Organization](Organization.md) | Represents a group or organization related to or responsible for one or more ...
-[DataSubstrate](DataSubstrate.md) | Represents a data substrate for Bridge2AI data
+| Name | Description | Modifies Slot |
+| --- | --- | --- |
+| [AnatomicalEntity](AnatomicalEntity.md) | A subcellular location, cell type or gross anatomical part | no |
+| [DataStandard](DataStandard.md) | Represents a general purpose standard in the Bridge2AI Standards Registry | no |
+| [ReferenceDataOrDataset](ReferenceDataOrDataset.md) | Represents a resource in the Bridge2AI Standards Registry serving as a standa... | no |
+| [Registry](Registry.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a... | no |
+| [OntologyOrVocabulary](OntologyOrVocabulary.md) | A set of concepts and categories, potentially defined or accompanied by their... | no |
+| [BiomedicalStandard](BiomedicalStandard.md) | Represents a standard in the Bridge2AI Standards Registry with particular app... | no |
+| [ModelRepository](ModelRepository.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a... | no |
+| [UseCase](UseCase.md) | Represents a use case for Bridge2AI standards | no |
+| [DataStandardOrTool](DataStandardOrTool.md) | Represents a standard or tool in the Bridge2AI Standards Registry | no |
+| [DataTopic](DataTopic.md) | Represents a general data topic for Bridge2AI data or the tools/standards app... | no |
+| [NamedThing](NamedThing.md) | A generic grouping for any identifiable entity | no |
+| [TrainingProgram](TrainingProgram.md) | Represents a training program for skills and experience related to standards ... | no |
+| [DataSubstrate](DataSubstrate.md) | Represents a data substrate for Bridge2AI data | no |
+| [SoftwareOrTool](SoftwareOrTool.md) | Represents a piece of software or computational tool in the Bridge2AI Standar... | no |
+| [Organization](Organization.md) | Represents a group or organization related to or responsible for one or more ... | no |
+| [ReferenceImplementation](ReferenceImplementation.md) | Represents an implementation of one or more standards or tools in the Bridge2... | no |
+
@@ -45,8 +54,6 @@ URI: [schema:name](http://schema.org/name)
-
-
## Identifier and Mapping Information
@@ -63,6 +70,16 @@ URI: [schema:name](http://schema.org/name)
+## Mappings
+
+| Mapping Type | Mapped Value |
+| --- | --- |
+| self | schema:name |
+| native | https://w3id.org/bridge2ai/standards-schema-all/:name |
+
+
+
+
## LinkML Source
diff --git a/docs/ncit_id.md b/docs/ncit_id.md
index d4c7e9b..0e21c14 100644
--- a/docs/ncit_id.md
+++ b/docs/ncit_id.md
@@ -1,7 +1,14 @@
+
+
# Slot: ncit_id
+
+
_Unique NCIt Identifier_
+
+
+
URI: [https://w3id.org/bridge2ai/standards-schema-all/:ncit_id](https://w3id.org/bridge2ai/standards-schema-all/:ncit_id)
@@ -11,12 +18,14 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:ncit_id](https://w3id.org
+
## Applicable Classes
-| Name | Description |
-| --- | --- |
-[DataTopic](DataTopic.md) | Represents a general data topic for Bridge2AI data or the tools/standards app...
-[DataSubstrate](DataSubstrate.md) | Represents a data substrate for Bridge2AI data
+| Name | Description | Modifies Slot |
+| --- | --- | --- |
+| [DataTopic](DataTopic.md) | Represents a general data topic for Bridge2AI data or the tools/standards app... | no |
+| [DataSubstrate](DataSubstrate.md) | Represents a data substrate for Bridge2AI data | no |
+
@@ -32,8 +41,6 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:ncit_id](https://w3id.org
-
-
## Examples
| Value |
@@ -56,6 +63,16 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:ncit_id](https://w3id.org
+## Mappings
+
+| Mapping Type | Mapped Value |
+| --- | --- |
+| self | https://w3id.org/bridge2ai/standards-schema-all/:ncit_id |
+| native | https://w3id.org/bridge2ai/standards-schema-all/:ncit_id |
+
+
+
+
## LinkML Source
@@ -70,8 +87,8 @@ values_from:
- NCIT
alias: ncit_id
domain_of:
-- DataTopic
- DataSubstrate
+- DataTopic
range: ncit_identifier
```
diff --git a/docs/node_property.md b/docs/node_property.md
index da280ef..cedf65a 100644
--- a/docs/node_property.md
+++ b/docs/node_property.md
@@ -1,7 +1,14 @@
+
+
# Slot: node_property
+
+
_A grouping for any property that holds between a node and a value._
+
+
+
URI: [https://w3id.org/bridge2ai/standards-schema-all/:node_property](https://w3id.org/bridge2ai/standards-schema-all/:node_property)
@@ -10,16 +17,12 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:node_property](https://w3
## Inheritance
* **node_property**
- * [use_case_category](use_case_category.md)
- * [known_limitations](known_limitations.md)
- * [data_topics](data_topics.md)
- * [data_substrates](data_substrates.md)
- * [standards_and_tools_for_dgp_use](standards_and_tools_for_dgp_use.md)
- * [alternative_standards_and_tools](alternative_standards_and_tools.md)
- * [enables](enables.md)
- * [involved_in_experimental_design](involved_in_experimental_design.md)
- * [involved_in_metadata_management](involved_in_metadata_management.md)
- * [involved_in_quality_control](involved_in_quality_control.md)
+ * [url](url.md)
+ * [xref](xref.md)
+ * [contributor_name](contributor_name.md)
+ * [contributor_github_name](contributor_github_name.md)
+ * [contributor_orcid](contributor_orcid.md)
+ * [contribution_date](contribution_date.md)
* [collection](collection.md)
* [purpose_detail](purpose_detail.md)
* [is_open](is_open.md)
@@ -27,16 +30,21 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:node_property](https://w3
* [requires_registration](requires_registration.md)
* [publication](publication.md)
* [formal_specification](formal_specification.md)
+ * [has_training_resource](has_training_resource.md)
* [not_relevant_to_dgps](not_relevant_to_dgps.md)
- * [url](url.md)
- * [xref](xref.md)
- * [contributor_name](contributor_name.md)
- * [contributor_github_name](contributor_github_name.md)
- * [contributor_orcid](contributor_orcid.md)
- * [contribution_date](contribution_date.md)
* [metadata_storage](metadata_storage.md)
* [file_extensions](file_extensions.md)
* [limitations](limitations.md)
+ * [use_case_category](use_case_category.md)
+ * [known_limitations](known_limitations.md)
+ * [data_topics](data_topics.md)
+ * [data_substrates](data_substrates.md)
+ * [standards_and_tools_for_dgp_use](standards_and_tools_for_dgp_use.md)
+ * [alternative_standards_and_tools](alternative_standards_and_tools.md)
+ * [enables](enables.md)
+ * [involved_in_experimental_design](involved_in_experimental_design.md)
+ * [involved_in_metadata_management](involved_in_metadata_management.md)
+ * [involved_in_quality_control](involved_in_quality_control.md)
@@ -44,11 +52,11 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:node_property](https://w3
-## Properties
-* Range: NONE
+## Properties
+* Range: NONE
@@ -70,6 +78,16 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:node_property](https://w3
+## Mappings
+
+| Mapping Type | Mapped Value |
+| --- | --- |
+| self | https://w3id.org/bridge2ai/standards-schema-all/:node_property |
+| native | https://w3id.org/bridge2ai/standards-schema-all/:node_property |
+
+
+
+
## LinkML Source
diff --git a/docs/not_relevant_to_dgps.md b/docs/not_relevant_to_dgps.md
index 22a640c..9b06150 100644
--- a/docs/not_relevant_to_dgps.md
+++ b/docs/not_relevant_to_dgps.md
@@ -1,7 +1,14 @@
+
+
# Slot: not_relevant_to_dgps
+
+
_Is the standard or tool currently relevant to DGPs?_
+
+
+
URI: [https://w3id.org/bridge2ai/standards-schema-all/:not_relevant_to_dgps](https://w3id.org/bridge2ai/standards-schema-all/:not_relevant_to_dgps)
@@ -16,20 +23,22 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:not_relevant_to_dgps](htt
+
## Applicable Classes
-| Name | Description |
-| --- | --- |
-[DataStandardOrTool](DataStandardOrTool.md) | Represents a standard or tool in the Bridge2AI Standards Registry
-[DataStandard](DataStandard.md) | Represents a general purpose standard in the Bridge2AI Standards Registry
-[BiomedicalStandard](BiomedicalStandard.md) | Represents a standard in the Bridge2AI Standards Registry with particular app...
-[Registry](Registry.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a...
-[OntologyOrVocabulary](OntologyOrVocabulary.md) | A set of concepts and categories, potentially defined or accompanied by their...
-[ModelRepository](ModelRepository.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a...
-[ReferenceDataOrDataset](ReferenceDataOrDataset.md) | Represents a resource in the Bridge2AI Standards Registry serving as a standa...
-[SoftwareOrTool](SoftwareOrTool.md) | Represents a piece of software or computational tool in the Bridge2AI Standar...
-[ReferenceImplementation](ReferenceImplementation.md) | Represents an implementation of one or more standards or tools in the Bridge2...
-[TrainingProgram](TrainingProgram.md) | Represents a training program for skills and experience related to standards ...
+| Name | Description | Modifies Slot |
+| --- | --- | --- |
+| [DataStandard](DataStandard.md) | Represents a general purpose standard in the Bridge2AI Standards Registry | no |
+| [ReferenceDataOrDataset](ReferenceDataOrDataset.md) | Represents a resource in the Bridge2AI Standards Registry serving as a standa... | no |
+| [Registry](Registry.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a... | no |
+| [OntologyOrVocabulary](OntologyOrVocabulary.md) | A set of concepts and categories, potentially defined or accompanied by their... | no |
+| [BiomedicalStandard](BiomedicalStandard.md) | Represents a standard in the Bridge2AI Standards Registry with particular app... | no |
+| [ModelRepository](ModelRepository.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a... | no |
+| [DataStandardOrTool](DataStandardOrTool.md) | Represents a standard or tool in the Bridge2AI Standards Registry | no |
+| [TrainingProgram](TrainingProgram.md) | Represents a training program for skills and experience related to standards ... | no |
+| [SoftwareOrTool](SoftwareOrTool.md) | Represents a piece of software or computational tool in the Bridge2AI Standar... | no |
+| [ReferenceImplementation](ReferenceImplementation.md) | Represents an implementation of one or more standards or tools in the Bridge2... | no |
+
@@ -44,8 +53,6 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:not_relevant_to_dgps](htt
-
-
## Identifier and Mapping Information
@@ -62,6 +69,16 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:not_relevant_to_dgps](htt
+## Mappings
+
+| Mapping Type | Mapped Value |
+| --- | --- |
+| self | https://w3id.org/bridge2ai/standards-schema-all/:not_relevant_to_dgps |
+| native | https://w3id.org/bridge2ai/standards-schema-all/:not_relevant_to_dgps |
+
+
+
+
## LinkML Source
diff --git a/docs/organizations.md b/docs/organizations.md
index 2834f6e..f12a611 100644
--- a/docs/organizations.md
+++ b/docs/organizations.md
@@ -1,7 +1,14 @@
+
+
# Slot: organizations
+
+
_Collection of associated organizations._
+
+
+
URI: [https://w3id.org/bridge2ai/standards-schema-all/:organizations](https://w3id.org/bridge2ai/standards-schema-all/:organizations)
@@ -11,11 +18,13 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:organizations](https://w3
+
## Applicable Classes
-| Name | Description |
-| --- | --- |
-[OrganizationContainer](OrganizationContainer.md) | A container for Organizations
+| Name | Description | Modifies Slot |
+| --- | --- | --- |
+| [OrganizationContainer](OrganizationContainer.md) | A container for Organizations | no |
+
@@ -25,10 +34,8 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:organizations](https://w3
## Properties
* Range: [Organization](Organization.md)
-* Multivalued: True
-
-
+* Multivalued: True
@@ -50,6 +57,16 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:organizations](https://w3
+## Mappings
+
+| Mapping Type | Mapped Value |
+| --- | --- |
+| self | https://w3id.org/bridge2ai/standards-schema-all/:organizations |
+| native | https://w3id.org/bridge2ai/standards-schema-all/:organizations |
+
+
+
+
## LinkML Source
@@ -58,11 +75,11 @@ name: organizations
description: Collection of associated organizations.
from_schema: https://w3id.org/bridge2ai/standards-schema-all
rank: 1000
-multivalued: true
alias: organizations
domain_of:
- OrganizationContainer
range: Organization
+multivalued: true
inlined: true
inlined_as_list: true
diff --git a/docs/publication.md b/docs/publication.md
index 9ce9b35..a67ed51 100644
--- a/docs/publication.md
+++ b/docs/publication.md
@@ -1,7 +1,14 @@
+
+
# Slot: publication
+
+
_Relevant publication for the standard or tool. Prefer a DOI or PUBMED._
+
+
+
URI: [https://w3id.org/bridge2ai/standards-schema-all/:publication](https://w3id.org/bridge2ai/standards-schema-all/:publication)
@@ -16,20 +23,22 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:publication](https://w3id
+
## Applicable Classes
-| Name | Description |
-| --- | --- |
-[DataStandardOrTool](DataStandardOrTool.md) | Represents a standard or tool in the Bridge2AI Standards Registry
-[DataStandard](DataStandard.md) | Represents a general purpose standard in the Bridge2AI Standards Registry
-[BiomedicalStandard](BiomedicalStandard.md) | Represents a standard in the Bridge2AI Standards Registry with particular app...
-[Registry](Registry.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a...
-[OntologyOrVocabulary](OntologyOrVocabulary.md) | A set of concepts and categories, potentially defined or accompanied by their...
-[ModelRepository](ModelRepository.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a...
-[ReferenceDataOrDataset](ReferenceDataOrDataset.md) | Represents a resource in the Bridge2AI Standards Registry serving as a standa...
-[SoftwareOrTool](SoftwareOrTool.md) | Represents a piece of software or computational tool in the Bridge2AI Standar...
-[ReferenceImplementation](ReferenceImplementation.md) | Represents an implementation of one or more standards or tools in the Bridge2...
-[TrainingProgram](TrainingProgram.md) | Represents a training program for skills and experience related to standards ...
+| Name | Description | Modifies Slot |
+| --- | --- | --- |
+| [DataStandard](DataStandard.md) | Represents a general purpose standard in the Bridge2AI Standards Registry | no |
+| [ReferenceDataOrDataset](ReferenceDataOrDataset.md) | Represents a resource in the Bridge2AI Standards Registry serving as a standa... | no |
+| [Registry](Registry.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a... | no |
+| [OntologyOrVocabulary](OntologyOrVocabulary.md) | A set of concepts and categories, potentially defined or accompanied by their... | no |
+| [BiomedicalStandard](BiomedicalStandard.md) | Represents a standard in the Bridge2AI Standards Registry with particular app... | no |
+| [ModelRepository](ModelRepository.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a... | no |
+| [DataStandardOrTool](DataStandardOrTool.md) | Represents a standard or tool in the Bridge2AI Standards Registry | no |
+| [TrainingProgram](TrainingProgram.md) | Represents a training program for skills and experience related to standards ... | no |
+| [SoftwareOrTool](SoftwareOrTool.md) | Represents a piece of software or computational tool in the Bridge2AI Standar... | no |
+| [ReferenceImplementation](ReferenceImplementation.md) | Represents an implementation of one or more standards or tools in the Bridge2... | no |
+
@@ -44,8 +53,6 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:publication](https://w3id
-
-
## Identifier and Mapping Information
@@ -62,6 +69,16 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:publication](https://w3id
+## Mappings
+
+| Mapping Type | Mapped Value |
+| --- | --- |
+| self | https://w3id.org/bridge2ai/standards-schema-all/:publication |
+| native | https://w3id.org/bridge2ai/standards-schema-all/:publication |
+
+
+
+
## LinkML Source
diff --git a/docs/purpose_detail.md b/docs/purpose_detail.md
index 1d6acf3..b153db5 100644
--- a/docs/purpose_detail.md
+++ b/docs/purpose_detail.md
@@ -1,7 +1,14 @@
+
+
# Slot: purpose_detail
+
+
_Text description of the standard or tool._
+
+
+
URI: [https://w3id.org/bridge2ai/standards-schema-all/:purpose_detail](https://w3id.org/bridge2ai/standards-schema-all/:purpose_detail)
@@ -16,20 +23,22 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:purpose_detail](https://w
+
## Applicable Classes
-| Name | Description |
-| --- | --- |
-[DataStandardOrTool](DataStandardOrTool.md) | Represents a standard or tool in the Bridge2AI Standards Registry
-[DataStandard](DataStandard.md) | Represents a general purpose standard in the Bridge2AI Standards Registry
-[BiomedicalStandard](BiomedicalStandard.md) | Represents a standard in the Bridge2AI Standards Registry with particular app...
-[Registry](Registry.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a...
-[OntologyOrVocabulary](OntologyOrVocabulary.md) | A set of concepts and categories, potentially defined or accompanied by their...
-[ModelRepository](ModelRepository.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a...
-[ReferenceDataOrDataset](ReferenceDataOrDataset.md) | Represents a resource in the Bridge2AI Standards Registry serving as a standa...
-[SoftwareOrTool](SoftwareOrTool.md) | Represents a piece of software or computational tool in the Bridge2AI Standar...
-[ReferenceImplementation](ReferenceImplementation.md) | Represents an implementation of one or more standards or tools in the Bridge2...
-[TrainingProgram](TrainingProgram.md) | Represents a training program for skills and experience related to standards ...
+| Name | Description | Modifies Slot |
+| --- | --- | --- |
+| [DataStandard](DataStandard.md) | Represents a general purpose standard in the Bridge2AI Standards Registry | no |
+| [ReferenceDataOrDataset](ReferenceDataOrDataset.md) | Represents a resource in the Bridge2AI Standards Registry serving as a standa... | no |
+| [Registry](Registry.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a... | no |
+| [OntologyOrVocabulary](OntologyOrVocabulary.md) | A set of concepts and categories, potentially defined or accompanied by their... | no |
+| [BiomedicalStandard](BiomedicalStandard.md) | Represents a standard in the Bridge2AI Standards Registry with particular app... | no |
+| [ModelRepository](ModelRepository.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a... | no |
+| [DataStandardOrTool](DataStandardOrTool.md) | Represents a standard or tool in the Bridge2AI Standards Registry | no |
+| [TrainingProgram](TrainingProgram.md) | Represents a training program for skills and experience related to standards ... | no |
+| [SoftwareOrTool](SoftwareOrTool.md) | Represents a piece of software or computational tool in the Bridge2AI Standar... | no |
+| [ReferenceImplementation](ReferenceImplementation.md) | Represents an implementation of one or more standards or tools in the Bridge2... | no |
+
@@ -44,8 +53,6 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:purpose_detail](https://w
-
-
## Identifier and Mapping Information
@@ -62,6 +69,16 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:purpose_detail](https://w
+## Mappings
+
+| Mapping Type | Mapped Value |
+| --- | --- |
+| self | https://w3id.org/bridge2ai/standards-schema-all/:purpose_detail |
+| native | https://w3id.org/bridge2ai/standards-schema-all/:purpose_detail |
+
+
+
+
## LinkML Source
diff --git a/docs/related_to.md b/docs/related_to.md
index 52690b7..e5294c2 100644
--- a/docs/related_to.md
+++ b/docs/related_to.md
@@ -1,7 +1,14 @@
+
+
# Slot: related_to
+
+
_A relationship that is asserted between two named things._
+
+
+
URI: [https://w3id.org/bridge2ai/standards-schema-all/:related_to](https://w3id.org/bridge2ai/standards-schema-all/:related_to)
@@ -10,10 +17,11 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:related_to](https://w3id.
## Inheritance
* **related_to**
+ * [subclass_of](subclass_of.md)
* [concerns_data_topic](concerns_data_topic.md)
* [has_relevant_organization](has_relevant_organization.md)
* [topic_involves_anatomy](topic_involves_anatomy.md)
- * [subclass_of](subclass_of.md)
+
@@ -21,24 +29,25 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:related_to](https://w3id.
## Applicable Classes
-| Name | Description |
-| --- | --- |
-[NamedThing](NamedThing.md) | A generic grouping for any identifiable entity
-[Organization](Organization.md) | Represents a group or organization related to or responsible for one or more ...
-[UseCase](UseCase.md) | Represents a use case for Bridge2AI standards
-[DataStandardOrTool](DataStandardOrTool.md) | Represents a standard or tool in the Bridge2AI Standards Registry
-[DataStandard](DataStandard.md) | Represents a general purpose standard in the Bridge2AI Standards Registry
-[BiomedicalStandard](BiomedicalStandard.md) | Represents a standard in the Bridge2AI Standards Registry with particular app...
-[Registry](Registry.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a...
-[OntologyOrVocabulary](OntologyOrVocabulary.md) | A set of concepts and categories, potentially defined or accompanied by their...
-[ModelRepository](ModelRepository.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a...
-[ReferenceDataOrDataset](ReferenceDataOrDataset.md) | Represents a resource in the Bridge2AI Standards Registry serving as a standa...
-[SoftwareOrTool](SoftwareOrTool.md) | Represents a piece of software or computational tool in the Bridge2AI Standar...
-[ReferenceImplementation](ReferenceImplementation.md) | Represents an implementation of one or more standards or tools in the Bridge2...
-[TrainingProgram](TrainingProgram.md) | Represents a training program for skills and experience related to standards ...
-[DataTopic](DataTopic.md) | Represents a general data topic for Bridge2AI data or the tools/standards app...
-[AnatomicalEntity](AnatomicalEntity.md) | A subcellular location, cell type or gross anatomical part
-[DataSubstrate](DataSubstrate.md) | Represents a data substrate for Bridge2AI data
+| Name | Description | Modifies Slot |
+| --- | --- | --- |
+| [AnatomicalEntity](AnatomicalEntity.md) | A subcellular location, cell type or gross anatomical part | no |
+| [DataStandard](DataStandard.md) | Represents a general purpose standard in the Bridge2AI Standards Registry | no |
+| [ReferenceDataOrDataset](ReferenceDataOrDataset.md) | Represents a resource in the Bridge2AI Standards Registry serving as a standa... | no |
+| [Registry](Registry.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a... | no |
+| [OntologyOrVocabulary](OntologyOrVocabulary.md) | A set of concepts and categories, potentially defined or accompanied by their... | no |
+| [BiomedicalStandard](BiomedicalStandard.md) | Represents a standard in the Bridge2AI Standards Registry with particular app... | no |
+| [ModelRepository](ModelRepository.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a... | no |
+| [UseCase](UseCase.md) | Represents a use case for Bridge2AI standards | no |
+| [DataStandardOrTool](DataStandardOrTool.md) | Represents a standard or tool in the Bridge2AI Standards Registry | no |
+| [DataTopic](DataTopic.md) | Represents a general data topic for Bridge2AI data or the tools/standards app... | no |
+| [NamedThing](NamedThing.md) | A generic grouping for any identifiable entity | no |
+| [TrainingProgram](TrainingProgram.md) | Represents a training program for skills and experience related to standards ... | no |
+| [DataSubstrate](DataSubstrate.md) | Represents a data substrate for Bridge2AI data | no |
+| [SoftwareOrTool](SoftwareOrTool.md) | Represents a piece of software or computational tool in the Bridge2AI Standar... | no |
+| [Organization](Organization.md) | Represents a group or organization related to or responsible for one or more ... | no |
+| [ReferenceImplementation](ReferenceImplementation.md) | Represents an implementation of one or more standards or tools in the Bridge2... | no |
+
@@ -48,10 +57,8 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:related_to](https://w3id.
## Properties
* Range: [NamedThing](NamedThing.md)
-* Multivalued: True
-
-
+* Multivalued: True
@@ -73,6 +80,16 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:related_to](https://w3id.
+## Mappings
+
+| Mapping Type | Mapped Value |
+| --- | --- |
+| self | https://w3id.org/bridge2ai/standards-schema-all/:related_to |
+| native | https://w3id.org/bridge2ai/standards-schema-all/:related_to |
+
+
+
+
## LinkML Source
@@ -82,7 +99,6 @@ description: A relationship that is asserted between two named things.
from_schema: https://w3id.org/bridge2ai/standards-schema-all
rank: 1000
domain: NamedThing
-multivalued: true
inherited: true
alias: related_to
domain_of:
@@ -90,6 +106,7 @@ domain_of:
- Organization
symmetric: true
range: NamedThing
+multivalued: true
```
\ No newline at end of file
diff --git a/docs/relevance_to_dgps.md b/docs/relevance_to_dgps.md
index b390973..65f00d7 100644
--- a/docs/relevance_to_dgps.md
+++ b/docs/relevance_to_dgps.md
@@ -1,7 +1,14 @@
+
+
# Slot: relevance_to_dgps
+
+
_Relevance of the use case to one or more DGPs._
+
+
+
URI: [https://w3id.org/bridge2ai/standards-schema-all/:relevance_to_dgps](https://w3id.org/bridge2ai/standards-schema-all/:relevance_to_dgps)
@@ -11,11 +18,13 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:relevance_to_dgps](https:
+
## Applicable Classes
-| Name | Description |
-| --- | --- |
-[UseCase](UseCase.md) | Represents a use case for Bridge2AI standards
+| Name | Description | Modifies Slot |
+| --- | --- | --- |
+| [UseCase](UseCase.md) | Represents a use case for Bridge2AI standards | no |
+
@@ -25,10 +34,8 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:relevance_to_dgps](https:
## Properties
* Range: [DataGeneratingProject](DataGeneratingProject.md)
-* Multivalued: True
-
-
+* Multivalued: True
@@ -50,6 +57,16 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:relevance_to_dgps](https:
+## Mappings
+
+| Mapping Type | Mapped Value |
+| --- | --- |
+| self | https://w3id.org/bridge2ai/standards-schema-all/:relevance_to_dgps |
+| native | https://w3id.org/bridge2ai/standards-schema-all/:relevance_to_dgps |
+
+
+
+
## LinkML Source
@@ -58,11 +75,11 @@ name: relevance_to_dgps
description: Relevance of the use case to one or more DGPs.
from_schema: https://w3id.org/bridge2ai/standards-schema-all
rank: 1000
-multivalued: true
alias: relevance_to_dgps
domain_of:
- UseCase
range: DataGeneratingProject
+multivalued: true
```
\ No newline at end of file
diff --git a/docs/requires_registration.md b/docs/requires_registration.md
index eba108b..2cce8ab 100644
--- a/docs/requires_registration.md
+++ b/docs/requires_registration.md
@@ -1,5 +1,12 @@
+
+
# Slot: requires_registration
-_Does usage of the standard or tool require registrion of a user or group with some organization or managerial body?_
+
+
+_Does usage of the standard or tool require registration of a user or group with some organization or managerial body?_
+
+
+
URI: [https://w3id.org/bridge2ai/standards-schema-all/:requires_registration](https://w3id.org/bridge2ai/standards-schema-all/:requires_registration)
@@ -16,20 +23,22 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:requires_registration](ht
+
## Applicable Classes
-| Name | Description |
-| --- | --- |
-[DataStandardOrTool](DataStandardOrTool.md) | Represents a standard or tool in the Bridge2AI Standards Registry
-[DataStandard](DataStandard.md) | Represents a general purpose standard in the Bridge2AI Standards Registry
-[BiomedicalStandard](BiomedicalStandard.md) | Represents a standard in the Bridge2AI Standards Registry with particular app...
-[Registry](Registry.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a...
-[OntologyOrVocabulary](OntologyOrVocabulary.md) | A set of concepts and categories, potentially defined or accompanied by their...
-[ModelRepository](ModelRepository.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a...
-[ReferenceDataOrDataset](ReferenceDataOrDataset.md) | Represents a resource in the Bridge2AI Standards Registry serving as a standa...
-[SoftwareOrTool](SoftwareOrTool.md) | Represents a piece of software or computational tool in the Bridge2AI Standar...
-[ReferenceImplementation](ReferenceImplementation.md) | Represents an implementation of one or more standards or tools in the Bridge2...
-[TrainingProgram](TrainingProgram.md) | Represents a training program for skills and experience related to standards ...
+| Name | Description | Modifies Slot |
+| --- | --- | --- |
+| [DataStandard](DataStandard.md) | Represents a general purpose standard in the Bridge2AI Standards Registry | no |
+| [ReferenceDataOrDataset](ReferenceDataOrDataset.md) | Represents a resource in the Bridge2AI Standards Registry serving as a standa... | no |
+| [Registry](Registry.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a... | no |
+| [OntologyOrVocabulary](OntologyOrVocabulary.md) | A set of concepts and categories, potentially defined or accompanied by their... | no |
+| [BiomedicalStandard](BiomedicalStandard.md) | Represents a standard in the Bridge2AI Standards Registry with particular app... | no |
+| [ModelRepository](ModelRepository.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a... | no |
+| [DataStandardOrTool](DataStandardOrTool.md) | Represents a standard or tool in the Bridge2AI Standards Registry | no |
+| [TrainingProgram](TrainingProgram.md) | Represents a training program for skills and experience related to standards ... | no |
+| [SoftwareOrTool](SoftwareOrTool.md) | Represents a piece of software or computational tool in the Bridge2AI Standar... | no |
+| [ReferenceImplementation](ReferenceImplementation.md) | Represents an implementation of one or more standards or tools in the Bridge2... | no |
+
@@ -44,8 +53,6 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:requires_registration](ht
-
-
## Identifier and Mapping Information
@@ -62,13 +69,23 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:requires_registration](ht
+## Mappings
+
+| Mapping Type | Mapped Value |
+| --- | --- |
+| self | https://w3id.org/bridge2ai/standards-schema-all/:requires_registration |
+| native | https://w3id.org/bridge2ai/standards-schema-all/:requires_registration |
+
+
+
+
## LinkML Source
```yaml
name: requires_registration
-description: Does usage of the standard or tool require registrion of a user or group
- with some organization or managerial body?
+description: Does usage of the standard or tool require registration of a user or
+ group with some organization or managerial body?
from_schema: https://w3id.org/bridge2ai/standards-schema-all
rank: 1000
is_a: node_property
diff --git a/docs/ror_id.md b/docs/ror_id.md
index 5ad1437..e21f00b 100644
--- a/docs/ror_id.md
+++ b/docs/ror_id.md
@@ -1,7 +1,14 @@
+
+
# Slot: ror_id
+
+
_Unique ROR identifier._
+
+
+
URI: [https://w3id.org/bridge2ai/standards-schema-all/:ror_id](https://w3id.org/bridge2ai/standards-schema-all/:ror_id)
@@ -11,11 +18,13 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:ror_id](https://w3id.org/
+
## Applicable Classes
-| Name | Description |
-| --- | --- |
-[Organization](Organization.md) | Represents a group or organization related to or responsible for one or more ...
+| Name | Description | Modifies Slot |
+| --- | --- | --- |
+| [Organization](Organization.md) | Represents a group or organization related to or responsible for one or more ... | no |
+
@@ -31,8 +40,6 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:ror_id](https://w3id.org/
-
-
## Examples
| Value |
@@ -55,6 +62,16 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:ror_id](https://w3id.org/
+## Mappings
+
+| Mapping Type | Mapped Value |
+| --- | --- |
+| self | https://w3id.org/bridge2ai/standards-schema-all/:ror_id |
+| native | https://w3id.org/bridge2ai/standards-schema-all/:ror_id |
+
+
+
+
## LinkML Source
diff --git a/docs/standards_and_tools_for_dgp_use.md b/docs/standards_and_tools_for_dgp_use.md
index f1c7234..f99305b 100644
--- a/docs/standards_and_tools_for_dgp_use.md
+++ b/docs/standards_and_tools_for_dgp_use.md
@@ -1,7 +1,14 @@
+
+
# Slot: standards_and_tools_for_dgp_use
+
+
_List of identifiers of standards and tools; those planned to be used, or already in use, by one or more Bridge2AI DGPs in addressing this use case, from those in the Standards Registry, or TBD if standards/tools not yet finalized for this use case._
+
+
+
URI: [https://w3id.org/bridge2ai/standards-schema-all/:standards_and_tools_for_dgp_use](https://w3id.org/bridge2ai/standards-schema-all/:standards_and_tools_for_dgp_use)
@@ -16,11 +23,13 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:standards_and_tools_for_d
+
## Applicable Classes
-| Name | Description |
-| --- | --- |
-[UseCase](UseCase.md) | Represents a use case for Bridge2AI standards
+| Name | Description | Modifies Slot |
+| --- | --- | --- |
+| [UseCase](UseCase.md) | Represents a use case for Bridge2AI standards | no |
+
@@ -30,10 +39,8 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:standards_and_tools_for_d
## Properties
* Range: [DataStandardOrTool](DataStandardOrTool.md)
-* Multivalued: True
-
-
+* Multivalued: True
@@ -55,6 +62,16 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:standards_and_tools_for_d
+## Mappings
+
+| Mapping Type | Mapped Value |
+| --- | --- |
+| self | https://w3id.org/bridge2ai/standards-schema-all/:standards_and_tools_for_dgp_use |
+| native | https://w3id.org/bridge2ai/standards-schema-all/:standards_and_tools_for_dgp_use |
+
+
+
+
## LinkML Source
@@ -68,11 +85,11 @@ from_schema: https://w3id.org/bridge2ai/standards-schema-all
rank: 1000
is_a: node_property
domain: NamedThing
-multivalued: true
alias: standards_and_tools_for_dgp_use
domain_of:
- UseCase
range: DataStandardOrTool
+multivalued: true
```
\ No newline at end of file
diff --git a/docs/subclass_of.md b/docs/subclass_of.md
index 009db1a..f1f4a53 100644
--- a/docs/subclass_of.md
+++ b/docs/subclass_of.md
@@ -1,7 +1,14 @@
+
+
# Slot: subclass_of
+
+
_Holds between two classes where the domain class is a specialization of the range class._
+
+
+
URI: [https://w3id.org/bridge2ai/standards-schema-all/:subclass_of](https://w3id.org/bridge2ai/standards-schema-all/:subclass_of)
@@ -16,26 +23,28 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:subclass_of](https://w3id
+
## Applicable Classes
-| Name | Description |
-| --- | --- |
-[NamedThing](NamedThing.md) | A generic grouping for any identifiable entity
-[UseCase](UseCase.md) | Represents a use case for Bridge2AI standards
-[DataStandardOrTool](DataStandardOrTool.md) | Represents a standard or tool in the Bridge2AI Standards Registry
-[DataStandard](DataStandard.md) | Represents a general purpose standard in the Bridge2AI Standards Registry
-[BiomedicalStandard](BiomedicalStandard.md) | Represents a standard in the Bridge2AI Standards Registry with particular app...
-[Registry](Registry.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a...
-[OntologyOrVocabulary](OntologyOrVocabulary.md) | A set of concepts and categories, potentially defined or accompanied by their...
-[ModelRepository](ModelRepository.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a...
-[ReferenceDataOrDataset](ReferenceDataOrDataset.md) | Represents a resource in the Bridge2AI Standards Registry serving as a standa...
-[SoftwareOrTool](SoftwareOrTool.md) | Represents a piece of software or computational tool in the Bridge2AI Standar...
-[ReferenceImplementation](ReferenceImplementation.md) | Represents an implementation of one or more standards or tools in the Bridge2...
-[TrainingProgram](TrainingProgram.md) | Represents a training program for skills and experience related to standards ...
-[DataTopic](DataTopic.md) | Represents a general data topic for Bridge2AI data or the tools/standards app...
-[AnatomicalEntity](AnatomicalEntity.md) | A subcellular location, cell type or gross anatomical part
-[Organization](Organization.md) | Represents a group or organization related to or responsible for one or more ...
-[DataSubstrate](DataSubstrate.md) | Represents a data substrate for Bridge2AI data
+| Name | Description | Modifies Slot |
+| --- | --- | --- |
+| [AnatomicalEntity](AnatomicalEntity.md) | A subcellular location, cell type or gross anatomical part | no |
+| [DataStandard](DataStandard.md) | Represents a general purpose standard in the Bridge2AI Standards Registry | no |
+| [ReferenceDataOrDataset](ReferenceDataOrDataset.md) | Represents a resource in the Bridge2AI Standards Registry serving as a standa... | no |
+| [Registry](Registry.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a... | no |
+| [OntologyOrVocabulary](OntologyOrVocabulary.md) | A set of concepts and categories, potentially defined or accompanied by their... | no |
+| [BiomedicalStandard](BiomedicalStandard.md) | Represents a standard in the Bridge2AI Standards Registry with particular app... | no |
+| [ModelRepository](ModelRepository.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a... | no |
+| [UseCase](UseCase.md) | Represents a use case for Bridge2AI standards | no |
+| [DataStandardOrTool](DataStandardOrTool.md) | Represents a standard or tool in the Bridge2AI Standards Registry | no |
+| [DataTopic](DataTopic.md) | Represents a general data topic for Bridge2AI data or the tools/standards app... | no |
+| [NamedThing](NamedThing.md) | A generic grouping for any identifiable entity | no |
+| [TrainingProgram](TrainingProgram.md) | Represents a training program for skills and experience related to standards ... | no |
+| [DataSubstrate](DataSubstrate.md) | Represents a data substrate for Bridge2AI data | no |
+| [SoftwareOrTool](SoftwareOrTool.md) | Represents a piece of software or computational tool in the Bridge2AI Standar... | no |
+| [Organization](Organization.md) | Represents a group or organization related to or responsible for one or more ... | no |
+| [ReferenceImplementation](ReferenceImplementation.md) | Represents an implementation of one or more standards or tools in the Bridge2... | no |
+
@@ -45,10 +54,8 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:subclass_of](https://w3id
## Properties
* Range: [NamedThing](NamedThing.md)
-* Multivalued: True
-
-
+* Multivalued: True
@@ -70,6 +77,18 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:subclass_of](https://w3id
+## Mappings
+
+| Mapping Type | Mapped Value |
+| --- | --- |
+| self | https://w3id.org/bridge2ai/standards-schema-all/:subclass_of |
+| native | https://w3id.org/bridge2ai/standards-schema-all/:subclass_of |
+| exact | rdfs:subClassOf, MESH:isa |
+| narrow | rdfs:subPropertyOf |
+
+
+
+
## LinkML Source
@@ -86,12 +105,12 @@ narrow_mappings:
rank: 1000
is_a: related_to
domain: NamedThing
-multivalued: true
inherited: true
alias: subclass_of
domain_of:
- NamedThing
range: NamedThing
+multivalued: true
```
\ No newline at end of file
diff --git a/docs/topic_involves_anatomy.md b/docs/topic_involves_anatomy.md
index c6a4e99..5a01a0b 100644
--- a/docs/topic_involves_anatomy.md
+++ b/docs/topic_involves_anatomy.md
@@ -1,7 +1,14 @@
+
+
# Slot: topic_involves_anatomy
+
+
_A relationship between a DataTopic and an anatomical entity._
+
+
+
URI: [https://w3id.org/bridge2ai/standards-schema-all/:topic_involves_anatomy](https://w3id.org/bridge2ai/standards-schema-all/:topic_involves_anatomy)
@@ -16,11 +23,13 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:topic_involves_anatomy](h
+
## Applicable Classes
-| Name | Description |
-| --- | --- |
-[DataTopic](DataTopic.md) | Represents a general data topic for Bridge2AI data or the tools/standards app...
+| Name | Description | Modifies Slot |
+| --- | --- | --- |
+| [DataTopic](DataTopic.md) | Represents a general data topic for Bridge2AI data or the tools/standards app... | no |
+
@@ -30,10 +39,8 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:topic_involves_anatomy](h
## Properties
* Range: [AnatomicalEntity](AnatomicalEntity.md)
-* Multivalued: True
-
-
+* Multivalued: True
@@ -55,6 +62,17 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:topic_involves_anatomy](h
+## Mappings
+
+| Mapping Type | Mapped Value |
+| --- | --- |
+| self | https://w3id.org/bridge2ai/standards-schema-all/:topic_involves_anatomy |
+| native | https://w3id.org/bridge2ai/standards-schema-all/:topic_involves_anatomy |
+| exact | RO:0004026 |
+
+
+
+
## LinkML Source
@@ -67,12 +85,12 @@ exact_mappings:
rank: 1000
is_a: related_to
domain: DataTopic
-multivalued: true
inherited: true
alias: topic_involves_anatomy
domain_of:
- DataTopic
range: AnatomicalEntity
+multivalued: true
```
\ No newline at end of file
diff --git a/docs/type.md b/docs/type.md
index 580a603..67edc5e 100644
--- a/docs/type.md
+++ b/docs/type.md
@@ -1,7 +1,14 @@
+
+
# Slot: type
+
+
_A generic slot for any label corresponding to the label for an entity type associated to the class._
+
+
+
URI: [https://w3id.org/bridge2ai/standards-schema-all/:type](https://w3id.org/bridge2ai/standards-schema-all/:type)
@@ -18,11 +25,11 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:type](https://w3id.org/br
-## Properties
-* Range: NONE
+## Properties
+* Range: NONE
@@ -44,6 +51,16 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:type](https://w3id.org/br
+## Mappings
+
+| Mapping Type | Mapped Value |
+| --- | --- |
+| self | https://w3id.org/bridge2ai/standards-schema-all/:type |
+| native | https://w3id.org/bridge2ai/standards-schema-all/:type |
+
+
+
+
## LinkML Source
diff --git a/docs/url.md b/docs/url.md
index 04deedd..715f140 100644
--- a/docs/url.md
+++ b/docs/url.md
@@ -1,7 +1,14 @@
+
+
# Slot: url
+
+
_URL for basic documentation of the standard or tool._
+
+
+
URI: [https://w3id.org/bridge2ai/standards-schema-all/:url](https://w3id.org/bridge2ai/standards-schema-all/:url)
@@ -16,21 +23,23 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:url](https://w3id.org/bri
+
## Applicable Classes
-| Name | Description |
-| --- | --- |
-[DataStandardOrTool](DataStandardOrTool.md) | Represents a standard or tool in the Bridge2AI Standards Registry
-[Organization](Organization.md) | Represents a group or organization related to or responsible for one or more ...
-[DataStandard](DataStandard.md) | Represents a general purpose standard in the Bridge2AI Standards Registry
-[BiomedicalStandard](BiomedicalStandard.md) | Represents a standard in the Bridge2AI Standards Registry with particular app...
-[Registry](Registry.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a...
-[OntologyOrVocabulary](OntologyOrVocabulary.md) | A set of concepts and categories, potentially defined or accompanied by their...
-[ModelRepository](ModelRepository.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a...
-[ReferenceDataOrDataset](ReferenceDataOrDataset.md) | Represents a resource in the Bridge2AI Standards Registry serving as a standa...
-[SoftwareOrTool](SoftwareOrTool.md) | Represents a piece of software or computational tool in the Bridge2AI Standar...
-[ReferenceImplementation](ReferenceImplementation.md) | Represents an implementation of one or more standards or tools in the Bridge2...
-[TrainingProgram](TrainingProgram.md) | Represents a training program for skills and experience related to standards ...
+| Name | Description | Modifies Slot |
+| --- | --- | --- |
+| [DataStandard](DataStandard.md) | Represents a general purpose standard in the Bridge2AI Standards Registry | no |
+| [ReferenceDataOrDataset](ReferenceDataOrDataset.md) | Represents a resource in the Bridge2AI Standards Registry serving as a standa... | no |
+| [Registry](Registry.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a... | no |
+| [OntologyOrVocabulary](OntologyOrVocabulary.md) | A set of concepts and categories, potentially defined or accompanied by their... | no |
+| [BiomedicalStandard](BiomedicalStandard.md) | Represents a standard in the Bridge2AI Standards Registry with particular app... | no |
+| [ModelRepository](ModelRepository.md) | Represents a resource in the Bridge2AI Standards Registry serving to curate a... | no |
+| [DataStandardOrTool](DataStandardOrTool.md) | Represents a standard or tool in the Bridge2AI Standards Registry | no |
+| [TrainingProgram](TrainingProgram.md) | Represents a training program for skills and experience related to standards ... | no |
+| [SoftwareOrTool](SoftwareOrTool.md) | Represents a piece of software or computational tool in the Bridge2AI Standar... | no |
+| [Organization](Organization.md) | Represents a group or organization related to or responsible for one or more ... | no |
+| [ReferenceImplementation](ReferenceImplementation.md) | Represents an implementation of one or more standards or tools in the Bridge2... | no |
+
@@ -45,8 +54,6 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:url](https://w3id.org/bri
-
-
## Identifier and Mapping Information
@@ -63,6 +70,16 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:url](https://w3id.org/bri
+## Mappings
+
+| Mapping Type | Mapped Value |
+| --- | --- |
+| self | https://w3id.org/bridge2ai/standards-schema-all/:url |
+| native | https://w3id.org/bridge2ai/standards-schema-all/:url |
+
+
+
+
## LinkML Source
diff --git a/docs/use_case_category.md b/docs/use_case_category.md
index f8e2cec..58a934a 100644
--- a/docs/use_case_category.md
+++ b/docs/use_case_category.md
@@ -1,7 +1,14 @@
+
+
# Slot: use_case_category
+
+
_Category of the UseCase. Not all projects will incorporate use cases in all categories._
+
+
+
URI: [https://w3id.org/bridge2ai/standards-schema-all/:use_case_category](https://w3id.org/bridge2ai/standards-schema-all/:use_case_category)
@@ -16,11 +23,13 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:use_case_category](https:
+
## Applicable Classes
-| Name | Description |
-| --- | --- |
-[UseCase](UseCase.md) | Represents a use case for Bridge2AI standards
+| Name | Description | Modifies Slot |
+| --- | --- | --- |
+| [UseCase](UseCase.md) | Represents a use case for Bridge2AI standards | yes |
+
@@ -35,8 +44,6 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:use_case_category](https:
-
-
## Identifier and Mapping Information
@@ -53,6 +60,16 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:use_case_category](https:
+## Mappings
+
+| Mapping Type | Mapped Value |
+| --- | --- |
+| self | https://w3id.org/bridge2ai/standards-schema-all/:use_case_category |
+| native | https://w3id.org/bridge2ai/standards-schema-all/:use_case_category |
+
+
+
+
## LinkML Source
diff --git a/docs/use_cases.md b/docs/use_cases.md
index de11194..afb085d 100644
--- a/docs/use_cases.md
+++ b/docs/use_cases.md
@@ -1,7 +1,14 @@
+
+
# Slot: use_cases
+
+
_Collection of associated use cases_
+
+
+
URI: [https://w3id.org/bridge2ai/standards-schema-all/:use_cases](https://w3id.org/bridge2ai/standards-schema-all/:use_cases)
@@ -11,11 +18,13 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:use_cases](https://w3id.o
+
## Applicable Classes
-| Name | Description |
-| --- | --- |
-[UseCaseContainer](UseCaseContainer.md) | A container for UseCase
+| Name | Description | Modifies Slot |
+| --- | --- | --- |
+| [UseCaseContainer](UseCaseContainer.md) | A container for UseCase | no |
+
@@ -25,10 +34,8 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:use_cases](https://w3id.o
## Properties
* Range: [UseCase](UseCase.md)
-* Multivalued: True
-
-
+* Multivalued: True
@@ -50,6 +57,16 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:use_cases](https://w3id.o
+## Mappings
+
+| Mapping Type | Mapped Value |
+| --- | --- |
+| self | https://w3id.org/bridge2ai/standards-schema-all/:use_cases |
+| native | https://w3id.org/bridge2ai/standards-schema-all/:use_cases |
+
+
+
+
## LinkML Source
@@ -58,11 +75,11 @@ name: use_cases
description: Collection of associated use cases
from_schema: https://w3id.org/bridge2ai/standards-schema-all
rank: 1000
-multivalued: true
alias: use_cases
domain_of:
- UseCaseContainer
range: UseCase
+multivalued: true
inlined: true
inlined_as_list: true
diff --git a/docs/use_conditions.md b/docs/use_conditions.md
index cb568bc..2231e6c 100644
--- a/docs/use_conditions.md
+++ b/docs/use_conditions.md
@@ -1,7 +1,14 @@
+
+
# Slot: use_conditions
+
+
_Applicable conditions on use, as defined by the Data Use Ontology (DUO)._
+
+
+
URI: [https://w3id.org/bridge2ai/standards-schema-all/:use_conditions](https://w3id.org/bridge2ai/standards-schema-all/:use_conditions)
@@ -18,13 +25,13 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:use_conditions](https://w
-## Properties
-* Range: [Uriorcurie](Uriorcurie.md)
-* Multivalued: True
+## Properties
+* Range: [Uriorcurie](Uriorcurie.md)
+* Multivalued: True
@@ -46,6 +53,16 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:use_conditions](https://w
+## Mappings
+
+| Mapping Type | Mapped Value |
+| --- | --- |
+| self | https://w3id.org/bridge2ai/standards-schema-all/:use_conditions |
+| native | https://w3id.org/bridge2ai/standards-schema-all/:use_conditions |
+
+
+
+
## LinkML Source
@@ -58,9 +75,9 @@ is_a: node_property
values_from:
- DUO
domain: NamedThing
-multivalued: true
alias: use_conditions
range: uriorcurie
+multivalued: true
```
\ No newline at end of file
diff --git a/docs/wikidata_id.md b/docs/wikidata_id.md
index 9a3931c..7b39b73 100644
--- a/docs/wikidata_id.md
+++ b/docs/wikidata_id.md
@@ -1,7 +1,14 @@
+
+
# Slot: wikidata_id
+
+
_Unique Wikidata identifier._
+
+
+
URI: [https://w3id.org/bridge2ai/standards-schema-all/:wikidata_id](https://w3id.org/bridge2ai/standards-schema-all/:wikidata_id)
@@ -11,11 +18,13 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:wikidata_id](https://w3id
+
## Applicable Classes
-| Name | Description |
-| --- | --- |
-[Organization](Organization.md) | Represents a group or organization related to or responsible for one or more ...
+| Name | Description | Modifies Slot |
+| --- | --- | --- |
+| [Organization](Organization.md) | Represents a group or organization related to or responsible for one or more ... | no |
+
@@ -31,8 +40,6 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:wikidata_id](https://w3id
-
-
## Examples
| Value |
@@ -55,6 +62,16 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:wikidata_id](https://w3id
+## Mappings
+
+| Mapping Type | Mapped Value |
+| --- | --- |
+| self | https://w3id.org/bridge2ai/standards-schema-all/:wikidata_id |
+| native | https://w3id.org/bridge2ai/standards-schema-all/:wikidata_id |
+
+
+
+
## LinkML Source
diff --git a/docs/xref.md b/docs/xref.md
index 689b7a6..cbcfd97 100644
--- a/docs/xref.md
+++ b/docs/xref.md
@@ -1,7 +1,14 @@
+
+
# Slot: xref
+
+
_URI of corresponding class in an ontology of experimental procedures, in CURIE form._
+
+
+
URI: [https://w3id.org/bridge2ai/standards-schema-all/:xref](https://w3id.org/bridge2ai/standards-schema-all/:xref)
@@ -16,11 +23,13 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:xref](https://w3id.org/br
+
## Applicable Classes
-| Name | Description |
-| --- | --- |
-[UseCase](UseCase.md) | Represents a use case for Bridge2AI standards
+| Name | Description | Modifies Slot |
+| --- | --- | --- |
+| [UseCase](UseCase.md) | Represents a use case for Bridge2AI standards | no |
+
@@ -30,10 +39,8 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:xref](https://w3id.org/br
## Properties
* Range: [Uriorcurie](Uriorcurie.md)
-* Multivalued: True
-
-
+* Multivalued: True
@@ -62,6 +69,16 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/:xref](https://w3id.org/br
+## Mappings
+
+| Mapping Type | Mapped Value |
+| --- | --- |
+| self | https://w3id.org/bridge2ai/standards-schema-all/:xref |
+| native | https://w3id.org/bridge2ai/standards-schema-all/:xref |
+
+
+
+
## LinkML Source
@@ -77,11 +94,11 @@ aliases:
rank: 1000
is_a: node_property
domain: NamedThing
-multivalued: true
alias: xref
domain_of:
- UseCase
range: uriorcurie
+multivalued: true
```
\ No newline at end of file
diff --git a/project/docs/AnatomicalEntity.md b/project/docs/AnatomicalEntity.md
index 7435733..be826f0 100644
--- a/project/docs/AnatomicalEntity.md
+++ b/project/docs/AnatomicalEntity.md
@@ -1,7 +1,6 @@
# Class: AnatomicalEntity
-
A subcellular location, cell type or gross anatomical part
URI: [https://w3id.org/bridge2ai/standards-schema-all/AnatomicalEntity](https://w3id.org/bridge2ai/standards-schema-all/AnatomicalEntity)
@@ -65,5 +64,4 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/AnatomicalEntity](https://
| --- | --- | --- |
| **Exact Mappings:** | | uberon:0001062 |
| | | wikidata:Q4936952 |
-| **Narrow Mappings:** | | ncit:C12219 |
-
+| **Narrow Mappings:** | | ncit:C12219 |
\ No newline at end of file
diff --git a/project/docs/BiomedicalStandard.md b/project/docs/BiomedicalStandard.md
index 1b98949..1e8d1af 100644
--- a/project/docs/BiomedicalStandard.md
+++ b/project/docs/BiomedicalStandard.md
@@ -1,13 +1,12 @@
# Class: BiomedicalStandard
-
Represents a standard in the Bridge2AI Standards Registry with particular applications or relevance to clinical or biomedical research purposes.
URI: [https://w3id.org/bridge2ai/standards-schema-all/BiomedicalStandard](https://w3id.org/bridge2ai/standards-schema-all/BiomedicalStandard)
-[:StandardsCollectionTag%20*;purpose_detail(i):string%20%3F;is_open(i):boolean%20%3F;requires_registration(i):boolean%20%3F;url(i):uriorcurie%20%3F;publication(i):uriorcurie%20%3F;formal_specification(i):uriorcurie%20%3F;not_relevant_to_dgps(i):boolean%20%3F;id(i):uriorcurie;category(i):category_type%20%3F;name(i):string%20%3F;description(i):string%20%3F;contributor_name(i):string%20%3F;contributor_github_name(i):string%20%3F;contributor_orcid(i):uriorcurie%20%3F;contribution_date(i):date%20%3F])](https://yuml.me/diagram/nofunky;dir:TB/class/[Organization],[NamedThing],[DataTopic],[DataStandard],[DataStandard]^-[BiomedicalStandard|collection(i):StandardsCollectionTag%20*;purpose_detail(i):string%20%3F;is_open(i):boolean%20%3F;requires_registration(i):boolean%20%3F;url(i):uriorcurie%20%3F;publication(i):uriorcurie%20%3F;formal_specification(i):uriorcurie%20%3F;not_relevant_to_dgps(i):boolean%20%3F;id(i):uriorcurie;category(i):category_type%20%3F;name(i):string%20%3F;description(i):string%20%3F;contributor_name(i):string%20%3F;contributor_github_name(i):string%20%3F;contributor_orcid(i):uriorcurie%20%3F;contribution_date(i):date%20%3F])
+[:StandardsCollectionTag%20*;purpose_detail(i):string%20%3F;is_open(i):boolean%20%3F;requires_registration(i):boolean%20%3F;url(i):uriorcurie%20%3F;publication(i):uriorcurie%20%3F;formal_specification(i):uriorcurie%20%3F;not_relevant_to_dgps(i):boolean%20%3F;id(i):uriorcurie;category(i):category_type%20%3F;name(i):string%20%3F;description(i):string%20%3F;contributor_name(i):string%20%3F;contributor_github_name(i):string%20%3F;contributor_orcid(i):uriorcurie%20%3F;contribution_date(i):date%20%3F])](https://yuml.me/diagram/nofunky;dir:TB/class/[Organization],[NamedThing],[DataTopic],[DataStandardOrTool],[DataStandard],[DataStandard]^-[BiomedicalStandard|collection(i):StandardsCollectionTag%20*;purpose_detail(i):string%20%3F;is_open(i):boolean%20%3F;requires_registration(i):boolean%20%3F;url(i):uriorcurie%20%3F;publication(i):uriorcurie%20%3F;formal_specification(i):uriorcurie%20%3F;not_relevant_to_dgps(i):boolean%20%3F;id(i):uriorcurie;category(i):category_type%20%3F;name(i):string%20%3F;description(i):string%20%3F;contributor_name(i):string%20%3F;contributor_github_name(i):string%20%3F;contributor_orcid(i):uriorcurie%20%3F;contribution_date(i):date%20%3F])
## Parents
@@ -59,6 +58,9 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/BiomedicalStandard](https:
* [has_relevant_organization](has_relevant_organization.md) 0..\*
* Description: Subject standard is managed or otherwise guided buy the object organization(s).
* Range: [Organization](Organization.md)
+ * [has_training_resource](has_training_resource.md) 0..\*
+ * Description: Relevant training resources, standard usage manuals, or other documentation for the standard or tool.
+ * Range: [DataStandardOrTool](DataStandardOrTool.md)
* [purpose_detail](purpose_detail.md) 0..1
* Description: Text description of the standard or tool.
* Range: [String](types/String.md)
@@ -66,7 +68,7 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/BiomedicalStandard](https:
* Description: Is the standard or tool FAIR and available free of cost?
* Range: [Boolean](types/Boolean.md)
* [requires_registration](requires_registration.md) 0..1
- * Description: Does usage of the standard or tool require registrion of a user or group with some organization or managerial body?
+ * Description: Does usage of the standard or tool require registration of a user or group with some organization or managerial body?
* Range: [Boolean](types/Boolean.md)
* [url](url.md) 0..1
* Description: URL for basic documentation of the standard or tool.
diff --git a/project/docs/DataGeneratingProject.md b/project/docs/DataGeneratingProject.md
index 7265227..3cc3697 100644
--- a/project/docs/DataGeneratingProject.md
+++ b/project/docs/DataGeneratingProject.md
@@ -1,17 +1,11 @@
# Enum: DataGeneratingProject
-
One of the Bridge2AI Data Generating Projects.
URI: [https://w3id.org/bridge2ai/standards-schema-all/DataGeneratingProject](https://w3id.org/bridge2ai/standards-schema-all/DataGeneratingProject)
-## Other properties
-
-| | | |
-| --- | --- | --- |
-
## Permissible Values
| Text | Description | Meaning | Other Information |
diff --git a/project/docs/DataStandard.md b/project/docs/DataStandard.md
index cd1664d..cfaddbb 100644
--- a/project/docs/DataStandard.md
+++ b/project/docs/DataStandard.md
@@ -1,7 +1,6 @@
# Class: DataStandard
-
Represents a general purpose standard in the Bridge2AI Standards Registry.
URI: [https://w3id.org/bridge2ai/standards-schema-all/DataStandard](https://w3id.org/bridge2ai/standards-schema-all/DataStandard)
@@ -66,6 +65,9 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/DataStandard](https://w3id
* [has_relevant_organization](has_relevant_organization.md) 0..\*
* Description: Subject standard is managed or otherwise guided buy the object organization(s).
* Range: [Organization](Organization.md)
+ * [has_training_resource](has_training_resource.md) 0..\*
+ * Description: Relevant training resources, standard usage manuals, or other documentation for the standard or tool.
+ * Range: [DataStandardOrTool](DataStandardOrTool.md)
* [purpose_detail](purpose_detail.md) 0..1
* Description: Text description of the standard or tool.
* Range: [String](types/String.md)
@@ -73,7 +75,7 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/DataStandard](https://w3id
* Description: Is the standard or tool FAIR and available free of cost?
* Range: [Boolean](types/Boolean.md)
* [requires_registration](requires_registration.md) 0..1
- * Description: Does usage of the standard or tool require registrion of a user or group with some organization or managerial body?
+ * Description: Does usage of the standard or tool require registration of a user or group with some organization or managerial body?
* Range: [Boolean](types/Boolean.md)
* [url](url.md) 0..1
* Description: URL for basic documentation of the standard or tool.
diff --git a/project/docs/DataStandardOrTool.md b/project/docs/DataStandardOrTool.md
index 89cd0f0..9a9ad1f 100644
--- a/project/docs/DataStandardOrTool.md
+++ b/project/docs/DataStandardOrTool.md
@@ -1,13 +1,12 @@
# Class: DataStandardOrTool
-
Represents a standard or tool in the Bridge2AI Standards Registry.
URI: [https://w3id.org/bridge2ai/standards-schema-all/DataStandardOrTool](https://w3id.org/bridge2ai/standards-schema-all/DataStandardOrTool)
-[](https://yuml.me/diagram/nofunky;dir:TB/class/[TrainingProgram],[SoftwareOrTool],[Registry],[ReferenceImplementation],[ReferenceDataOrDataset],[Organization],[OntologyOrVocabulary],[NamedThing],[ModelRepository],[DataTopic],[Organization][DataStandardOrTool],[DataStandardOrToolContainer]++-%20data_standardortools_collection%200..*>[DataStandardOrTool],[UseCase]-%20standards_and_tools_for_dgp_use%200..*>[DataStandardOrTool],[DataStandardOrTool]^-[TrainingProgram],[DataStandardOrTool]^-[SoftwareOrTool],[DataStandardOrTool]^-[Registry],[DataStandardOrTool]^-[ReferenceImplementation],[DataStandardOrTool]^-[ReferenceDataOrDataset],[DataStandardOrTool]^-[OntologyOrVocabulary],[DataStandardOrTool]^-[ModelRepository],[DataStandardOrTool]^-[DataStandard],[NamedThing]^-[DataStandardOrTool],[UseCase],[DataStandardOrToolContainer],[DataStandard])
+[](https://yuml.me/diagram/nofunky;dir:TB/class/[TrainingProgram],[SoftwareOrTool],[Registry],[ReferenceImplementation],[ReferenceDataOrDataset],[Organization],[OntologyOrVocabulary],[NamedThing],[ModelRepository],[DataTopic],[DataStandardOrTool][DataStandardOrTool],[DataStandardOrToolContainer]++-%20data_standardortools_collection%200..*>[DataStandardOrTool],[UseCase]-%20standards_and_tools_for_dgp_use%200..*>[DataStandardOrTool],[DataStandardOrTool]^-[TrainingProgram],[DataStandardOrTool]^-[SoftwareOrTool],[DataStandardOrTool]^-[Registry],[DataStandardOrTool]^-[ReferenceImplementation],[DataStandardOrTool]^-[ReferenceDataOrDataset],[DataStandardOrTool]^-[OntologyOrVocabulary],[DataStandardOrTool]^-[ModelRepository],[DataStandardOrTool]^-[DataStandard],[NamedThing]^-[DataStandardOrTool],[UseCase],[DataStandardOrToolContainer],[DataStandard])
## Parents
@@ -16,7 +15,7 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/DataStandardOrTool](https:
## Children
* [DataStandard](DataStandard.md) - Represents a general purpose standard in the Bridge2AI Standards Registry.
- * [ModelRepository](ModelRepository.md) - Represents a resource in the Bridge2AI Standards Registry serving to curate and store computational models. To be a respository, the resource must not index models alone.
+ * [ModelRepository](ModelRepository.md) - Represents a resource in the Bridge2AI Standards Registry serving to curate and store computational models. To be a repository, the resource must not index models alone.
* [OntologyOrVocabulary](OntologyOrVocabulary.md) - A set of concepts and categories, potentially defined or accompanied by their hierarchical relationships.
* [ReferenceDataOrDataset](ReferenceDataOrDataset.md) - Represents a resource in the Bridge2AI Standards Registry serving as a standardized, reusable data source.
* [ReferenceImplementation](ReferenceImplementation.md) - Represents an implementation of one or more standards or tools in the Bridge2AI Standards Registry, whether as a full specification in a particular language or as an application to a specific use case.
@@ -28,6 +27,7 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/DataStandardOrTool](https:
* **[NamedThing](NamedThing.md)** *[alternative_standards_and_tools](alternative_standards_and_tools.md)* 0..\* **[DataStandardOrTool](DataStandardOrTool.md)**
* **None** *[data_standardortools_collection](data_standardortools_collection.md)* 0..\* **[DataStandardOrTool](DataStandardOrTool.md)**
+ * **[NamedThing](NamedThing.md)** *[has_training_resource](has_training_resource.md)* 0..\* **[DataStandardOrTool](DataStandardOrTool.md)**
* **[NamedThing](NamedThing.md)** *[standards_and_tools_for_dgp_use](standards_and_tools_for_dgp_use.md)* 0..\* **[DataStandardOrTool](DataStandardOrTool.md)**
## Attributes
@@ -44,6 +44,9 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/DataStandardOrTool](https:
* [has_relevant_organization](has_relevant_organization.md) 0..\*
* Description: Subject standard is managed or otherwise guided buy the object organization(s).
* Range: [Organization](Organization.md)
+ * [has_training_resource](has_training_resource.md) 0..\*
+ * Description: Relevant training resources, standard usage manuals, or other documentation for the standard or tool.
+ * Range: [DataStandardOrTool](DataStandardOrTool.md)
* [purpose_detail](purpose_detail.md) 0..1
* Description: Text description of the standard or tool.
* Range: [String](types/String.md)
@@ -51,7 +54,7 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/DataStandardOrTool](https:
* Description: Is the standard or tool FAIR and available free of cost?
* Range: [Boolean](types/Boolean.md)
* [requires_registration](requires_registration.md) 0..1
- * Description: Does usage of the standard or tool require registrion of a user or group with some organization or managerial body?
+ * Description: Does usage of the standard or tool require registration of a user or group with some organization or managerial body?
* Range: [Boolean](types/Boolean.md)
* [url](url.md) 0..1
* Description: URL for basic documentation of the standard or tool.
diff --git a/project/docs/DataStandardOrToolContainer.md b/project/docs/DataStandardOrToolContainer.md
index b8271e2..5bbbb46 100644
--- a/project/docs/DataStandardOrToolContainer.md
+++ b/project/docs/DataStandardOrToolContainer.md
@@ -1,7 +1,6 @@
# Class: DataStandardOrToolContainer
-
A container for DataStandardOrTool(s).
URI: [https://w3id.org/bridge2ai/standards-schema-all/DataStandardOrToolContainer](https://w3id.org/bridge2ai/standards-schema-all/DataStandardOrToolContainer)
diff --git a/project/docs/DataSubstrate.md b/project/docs/DataSubstrate.md
index 2750698..62946c0 100644
--- a/project/docs/DataSubstrate.md
+++ b/project/docs/DataSubstrate.md
@@ -1,7 +1,6 @@
# Class: DataSubstrate
-
Represents a data substrate for Bridge2AI data. This may be a high-level data structure or a specific implementation of that structure. Interpret as "data, in this form or format", as compared to DataStandard, which refers to the set of rules defining a standard. For example, data in TSV format is represented as a DataSubstrate but the concept of TSV format is a DataStandard.
URI: [https://w3id.org/bridge2ai/standards-schema-all/DataSubstrate](https://w3id.org/bridge2ai/standards-schema-all/DataSubstrate)
diff --git a/project/docs/DataSubstrateContainer.md b/project/docs/DataSubstrateContainer.md
index 5d3fd9f..edb949a 100644
--- a/project/docs/DataSubstrateContainer.md
+++ b/project/docs/DataSubstrateContainer.md
@@ -1,7 +1,6 @@
# Class: DataSubstrateContainer
-
A container for DataSubstrates.
URI: [https://w3id.org/bridge2ai/standards-schema-all/DataSubstrateContainer](https://w3id.org/bridge2ai/standards-schema-all/DataSubstrateContainer)
diff --git a/project/docs/DataTopic.md b/project/docs/DataTopic.md
index 3d0e21d..8da8573 100644
--- a/project/docs/DataTopic.md
+++ b/project/docs/DataTopic.md
@@ -1,7 +1,6 @@
# Class: DataTopic
-
Represents a general data topic for Bridge2AI data or the tools/standards applied to the data.
URI: [https://w3id.org/bridge2ai/standards-schema-all/DataTopic](https://w3id.org/bridge2ai/standards-schema-all/DataTopic)
diff --git a/project/docs/DataTopicContainer.md b/project/docs/DataTopicContainer.md
index 704c658..b048639 100644
--- a/project/docs/DataTopicContainer.md
+++ b/project/docs/DataTopicContainer.md
@@ -1,7 +1,6 @@
# Class: DataTopicContainer
-
A container for DataTopics.
URI: [https://w3id.org/bridge2ai/standards-schema-all/DataTopicContainer](https://w3id.org/bridge2ai/standards-schema-all/DataTopicContainer)
diff --git a/project/docs/ModelRepository.md b/project/docs/ModelRepository.md
index f084922..15b7cf0 100644
--- a/project/docs/ModelRepository.md
+++ b/project/docs/ModelRepository.md
@@ -1,8 +1,7 @@
# Class: ModelRepository
-
-Represents a resource in the Bridge2AI Standards Registry serving to curate and store computational models. To be a respository, the resource must not index models alone.
+Represents a resource in the Bridge2AI Standards Registry serving to curate and store computational models. To be a repository, the resource must not index models alone.
URI: [https://w3id.org/bridge2ai/standards-schema-all/ModelRepository](https://w3id.org/bridge2ai/standards-schema-all/ModelRepository)
@@ -59,6 +58,9 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/ModelRepository](https://w
* [has_relevant_organization](has_relevant_organization.md) 0..\*
* Description: Subject standard is managed or otherwise guided buy the object organization(s).
* Range: [Organization](Organization.md)
+ * [has_training_resource](has_training_resource.md) 0..\*
+ * Description: Relevant training resources, standard usage manuals, or other documentation for the standard or tool.
+ * Range: [DataStandardOrTool](DataStandardOrTool.md)
* [purpose_detail](purpose_detail.md) 0..1
* Description: Text description of the standard or tool.
* Range: [String](types/String.md)
@@ -66,7 +68,7 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/ModelRepository](https://w
* Description: Is the standard or tool FAIR and available free of cost?
* Range: [Boolean](types/Boolean.md)
* [requires_registration](requires_registration.md) 0..1
- * Description: Does usage of the standard or tool require registrion of a user or group with some organization or managerial body?
+ * Description: Does usage of the standard or tool require registration of a user or group with some organization or managerial body?
* Range: [Boolean](types/Boolean.md)
* [url](url.md) 0..1
* Description: URL for basic documentation of the standard or tool.
diff --git a/project/docs/NamedThing.md b/project/docs/NamedThing.md
index dd86af5..1c7ebb6 100644
--- a/project/docs/NamedThing.md
+++ b/project/docs/NamedThing.md
@@ -1,7 +1,6 @@
# Class: NamedThing
-
A generic grouping for any identifiable entity
URI: [https://w3id.org/bridge2ai/standards-schema-all/NamedThing](https://w3id.org/bridge2ai/standards-schema-all/NamedThing)
@@ -65,5 +64,4 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/NamedThing](https://w3id.o
| | | |
| --- | --- | --- |
-| **Mappings:** | | schema:Thing |
-
+| **Mappings:** | | schema:Thing |
\ No newline at end of file
diff --git a/project/docs/OntologyOrVocabulary.md b/project/docs/OntologyOrVocabulary.md
index 944dcc9..26019c6 100644
--- a/project/docs/OntologyOrVocabulary.md
+++ b/project/docs/OntologyOrVocabulary.md
@@ -1,7 +1,6 @@
# Class: OntologyOrVocabulary
-
A set of concepts and categories, potentially defined or accompanied by their hierarchical relationships.
URI: [https://w3id.org/bridge2ai/standards-schema-all/OntologyOrVocabulary](https://w3id.org/bridge2ai/standards-schema-all/OntologyOrVocabulary)
@@ -59,6 +58,9 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/OntologyOrVocabulary](http
* [has_relevant_organization](has_relevant_organization.md) 0..\*
* Description: Subject standard is managed or otherwise guided buy the object organization(s).
* Range: [Organization](Organization.md)
+ * [has_training_resource](has_training_resource.md) 0..\*
+ * Description: Relevant training resources, standard usage manuals, or other documentation for the standard or tool.
+ * Range: [DataStandardOrTool](DataStandardOrTool.md)
* [purpose_detail](purpose_detail.md) 0..1
* Description: Text description of the standard or tool.
* Range: [String](types/String.md)
@@ -66,7 +68,7 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/OntologyOrVocabulary](http
* Description: Is the standard or tool FAIR and available free of cost?
* Range: [Boolean](types/Boolean.md)
* [requires_registration](requires_registration.md) 0..1
- * Description: Does usage of the standard or tool require registrion of a user or group with some organization or managerial body?
+ * Description: Does usage of the standard or tool require registration of a user or group with some organization or managerial body?
* Range: [Boolean](types/Boolean.md)
* [url](url.md) 0..1
* Description: URL for basic documentation of the standard or tool.
diff --git a/project/docs/Organization.md b/project/docs/Organization.md
index 5c2da51..5f45df2 100644
--- a/project/docs/Organization.md
+++ b/project/docs/Organization.md
@@ -1,7 +1,6 @@
# Class: Organization
-
Represents a group or organization related to or responsible for one or more Bridge2AI standards.
URI: [https://w3id.org/bridge2ai/standards-schema-all/Organization](https://w3id.org/bridge2ai/standards-schema-all/Organization)
diff --git a/project/docs/OrganizationContainer.md b/project/docs/OrganizationContainer.md
index cd8fe42..4816f25 100644
--- a/project/docs/OrganizationContainer.md
+++ b/project/docs/OrganizationContainer.md
@@ -1,7 +1,6 @@
# Class: OrganizationContainer
-
A container for Organizations.
URI: [https://w3id.org/bridge2ai/standards-schema-all/OrganizationContainer](https://w3id.org/bridge2ai/standards-schema-all/OrganizationContainer)
diff --git a/project/docs/ReferenceDataOrDataset.md b/project/docs/ReferenceDataOrDataset.md
index c3a1709..bc1cdc9 100644
--- a/project/docs/ReferenceDataOrDataset.md
+++ b/project/docs/ReferenceDataOrDataset.md
@@ -1,7 +1,6 @@
# Class: ReferenceDataOrDataset
-
Represents a resource in the Bridge2AI Standards Registry serving as a standardized, reusable data source.
URI: [https://w3id.org/bridge2ai/standards-schema-all/ReferenceDataOrDataset](https://w3id.org/bridge2ai/standards-schema-all/ReferenceDataOrDataset)
@@ -59,6 +58,9 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/ReferenceDataOrDataset](ht
* [has_relevant_organization](has_relevant_organization.md) 0..\*
* Description: Subject standard is managed or otherwise guided buy the object organization(s).
* Range: [Organization](Organization.md)
+ * [has_training_resource](has_training_resource.md) 0..\*
+ * Description: Relevant training resources, standard usage manuals, or other documentation for the standard or tool.
+ * Range: [DataStandardOrTool](DataStandardOrTool.md)
* [purpose_detail](purpose_detail.md) 0..1
* Description: Text description of the standard or tool.
* Range: [String](types/String.md)
@@ -66,7 +68,7 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/ReferenceDataOrDataset](ht
* Description: Is the standard or tool FAIR and available free of cost?
* Range: [Boolean](types/Boolean.md)
* [requires_registration](requires_registration.md) 0..1
- * Description: Does usage of the standard or tool require registrion of a user or group with some organization or managerial body?
+ * Description: Does usage of the standard or tool require registration of a user or group with some organization or managerial body?
* Range: [Boolean](types/Boolean.md)
* [url](url.md) 0..1
* Description: URL for basic documentation of the standard or tool.
diff --git a/project/docs/ReferenceImplementation.md b/project/docs/ReferenceImplementation.md
index fff3bb5..4184c12 100644
--- a/project/docs/ReferenceImplementation.md
+++ b/project/docs/ReferenceImplementation.md
@@ -1,7 +1,6 @@
# Class: ReferenceImplementation
-
Represents an implementation of one or more standards or tools in the Bridge2AI Standards Registry, whether as a full specification in a particular language or as an application to a specific use case.
URI: [https://w3id.org/bridge2ai/standards-schema-all/ReferenceImplementation](https://w3id.org/bridge2ai/standards-schema-all/ReferenceImplementation)
@@ -59,6 +58,9 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/ReferenceImplementation](h
* [has_relevant_organization](has_relevant_organization.md) 0..\*
* Description: Subject standard is managed or otherwise guided buy the object organization(s).
* Range: [Organization](Organization.md)
+ * [has_training_resource](has_training_resource.md) 0..\*
+ * Description: Relevant training resources, standard usage manuals, or other documentation for the standard or tool.
+ * Range: [DataStandardOrTool](DataStandardOrTool.md)
* [purpose_detail](purpose_detail.md) 0..1
* Description: Text description of the standard or tool.
* Range: [String](types/String.md)
@@ -66,7 +68,7 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/ReferenceImplementation](h
* Description: Is the standard or tool FAIR and available free of cost?
* Range: [Boolean](types/Boolean.md)
* [requires_registration](requires_registration.md) 0..1
- * Description: Does usage of the standard or tool require registrion of a user or group with some organization or managerial body?
+ * Description: Does usage of the standard or tool require registration of a user or group with some organization or managerial body?
* Range: [Boolean](types/Boolean.md)
* [url](url.md) 0..1
* Description: URL for basic documentation of the standard or tool.
diff --git a/project/docs/Registry.md b/project/docs/Registry.md
index 2316ac4..9076bf1 100644
--- a/project/docs/Registry.md
+++ b/project/docs/Registry.md
@@ -1,7 +1,6 @@
# Class: Registry
-
Represents a resource in the Bridge2AI Standards Registry serving to curate and/or index other resources.
URI: [https://w3id.org/bridge2ai/standards-schema-all/Registry](https://w3id.org/bridge2ai/standards-schema-all/Registry)
@@ -59,6 +58,9 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/Registry](https://w3id.org
* [has_relevant_organization](has_relevant_organization.md) 0..\*
* Description: Subject standard is managed or otherwise guided buy the object organization(s).
* Range: [Organization](Organization.md)
+ * [has_training_resource](has_training_resource.md) 0..\*
+ * Description: Relevant training resources, standard usage manuals, or other documentation for the standard or tool.
+ * Range: [DataStandardOrTool](DataStandardOrTool.md)
* [purpose_detail](purpose_detail.md) 0..1
* Description: Text description of the standard or tool.
* Range: [String](types/String.md)
@@ -66,7 +68,7 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/Registry](https://w3id.org
* Description: Is the standard or tool FAIR and available free of cost?
* Range: [Boolean](types/Boolean.md)
* [requires_registration](requires_registration.md) 0..1
- * Description: Does usage of the standard or tool require registrion of a user or group with some organization or managerial body?
+ * Description: Does usage of the standard or tool require registration of a user or group with some organization or managerial body?
* Range: [Boolean](types/Boolean.md)
* [url](url.md) 0..1
* Description: URL for basic documentation of the standard or tool.
diff --git a/project/docs/SoftwareOrTool.md b/project/docs/SoftwareOrTool.md
index 3abab87..5d7edcc 100644
--- a/project/docs/SoftwareOrTool.md
+++ b/project/docs/SoftwareOrTool.md
@@ -1,7 +1,6 @@
# Class: SoftwareOrTool
-
Represents a piece of software or computational tool in the Bridge2AI Standards Registry.
URI: [https://w3id.org/bridge2ai/standards-schema-all/SoftwareOrTool](https://w3id.org/bridge2ai/standards-schema-all/SoftwareOrTool)
@@ -59,6 +58,9 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/SoftwareOrTool](https://w3
* [has_relevant_organization](has_relevant_organization.md) 0..\*
* Description: Subject standard is managed or otherwise guided buy the object organization(s).
* Range: [Organization](Organization.md)
+ * [has_training_resource](has_training_resource.md) 0..\*
+ * Description: Relevant training resources, standard usage manuals, or other documentation for the standard or tool.
+ * Range: [DataStandardOrTool](DataStandardOrTool.md)
* [purpose_detail](purpose_detail.md) 0..1
* Description: Text description of the standard or tool.
* Range: [String](types/String.md)
@@ -66,7 +68,7 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/SoftwareOrTool](https://w3
* Description: Is the standard or tool FAIR and available free of cost?
* Range: [Boolean](types/Boolean.md)
* [requires_registration](requires_registration.md) 0..1
- * Description: Does usage of the standard or tool require registrion of a user or group with some organization or managerial body?
+ * Description: Does usage of the standard or tool require registration of a user or group with some organization or managerial body?
* Range: [Boolean](types/Boolean.md)
* [url](url.md) 0..1
* Description: URL for basic documentation of the standard or tool.
diff --git a/project/docs/StandardsCollectionTag.md b/project/docs/StandardsCollectionTag.md
index 9485d9b..dce986e 100644
--- a/project/docs/StandardsCollectionTag.md
+++ b/project/docs/StandardsCollectionTag.md
@@ -1,17 +1,11 @@
# Enum: StandardsCollectionTag
-
Tags for specific sets of standards.
URI: [https://w3id.org/bridge2ai/standards-schema-all/StandardsCollectionTag](https://w3id.org/bridge2ai/standards-schema-all/StandardsCollectionTag)
-## Other properties
-
-| | | |
-| --- | --- | --- |
-
## Permissible Values
| Text | Description | Meaning | Other Information |
diff --git a/project/docs/TrainingProgram.md b/project/docs/TrainingProgram.md
index 468d3d2..d783b3c 100644
--- a/project/docs/TrainingProgram.md
+++ b/project/docs/TrainingProgram.md
@@ -1,7 +1,6 @@
# Class: TrainingProgram
-
Represents a training program for skills and experience related to standards or tools in the Bridge2AI Standards Registry.
URI: [https://w3id.org/bridge2ai/standards-schema-all/TrainingProgram](https://w3id.org/bridge2ai/standards-schema-all/TrainingProgram)
@@ -59,6 +58,9 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/TrainingProgram](https://w
* [has_relevant_organization](has_relevant_organization.md) 0..\*
* Description: Subject standard is managed or otherwise guided buy the object organization(s).
* Range: [Organization](Organization.md)
+ * [has_training_resource](has_training_resource.md) 0..\*
+ * Description: Relevant training resources, standard usage manuals, or other documentation for the standard or tool.
+ * Range: [DataStandardOrTool](DataStandardOrTool.md)
* [purpose_detail](purpose_detail.md) 0..1
* Description: Text description of the standard or tool.
* Range: [String](types/String.md)
@@ -66,7 +68,7 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/TrainingProgram](https://w
* Description: Is the standard or tool FAIR and available free of cost?
* Range: [Boolean](types/Boolean.md)
* [requires_registration](requires_registration.md) 0..1
- * Description: Does usage of the standard or tool require registrion of a user or group with some organization or managerial body?
+ * Description: Does usage of the standard or tool require registration of a user or group with some organization or managerial body?
* Range: [Boolean](types/Boolean.md)
* [url](url.md) 0..1
* Description: URL for basic documentation of the standard or tool.
diff --git a/project/docs/UseCase.md b/project/docs/UseCase.md
index 40a7804..961ef03 100644
--- a/project/docs/UseCase.md
+++ b/project/docs/UseCase.md
@@ -1,7 +1,6 @@
# Class: UseCase
-
Represents a use case for Bridge2AI standards.
URI: [https://w3id.org/bridge2ai/standards-schema-all/UseCase](https://w3id.org/bridge2ai/standards-schema-all/UseCase)
diff --git a/project/docs/UseCaseCategory.md b/project/docs/UseCaseCategory.md
index 843ca66..b6ba2ae 100644
--- a/project/docs/UseCaseCategory.md
+++ b/project/docs/UseCaseCategory.md
@@ -1,17 +1,11 @@
# Enum: UseCaseCategory
-
Category of use case.
URI: [https://w3id.org/bridge2ai/standards-schema-all/UseCaseCategory](https://w3id.org/bridge2ai/standards-schema-all/UseCaseCategory)
-## Other properties
-
-| | | |
-| --- | --- | --- |
-
## Permissible Values
| Text | Description | Meaning | Other Information |
diff --git a/project/docs/UseCaseContainer.md b/project/docs/UseCaseContainer.md
index b7e513f..a142cc9 100644
--- a/project/docs/UseCaseContainer.md
+++ b/project/docs/UseCaseContainer.md
@@ -1,7 +1,6 @@
# Class: UseCaseContainer
-
A container for UseCase.
URI: [https://w3id.org/bridge2ai/standards-schema-all/UseCaseContainer](https://w3id.org/bridge2ai/standards-schema-all/UseCaseContainer)
diff --git a/project/docs/UseCase_use_case_category.md b/project/docs/UseCase_use_case_category.md
index bad63d9..516d315 100644
--- a/project/docs/UseCase_use_case_category.md
+++ b/project/docs/UseCase_use_case_category.md
@@ -1,7 +1,6 @@
# Slot: use_case_category
-
Category of the UseCase. Not all projects will incorporate use cases in all categories.
URI: [https://w3id.org/bridge2ai/standards-schema-all/UseCase_use_case_category](https://w3id.org/bridge2ai/standards-schema-all/UseCase_use_case_category)
diff --git a/project/docs/alternative_standards_and_tools.md b/project/docs/alternative_standards_and_tools.md
index 0e5dac9..9ae30bb 100644
--- a/project/docs/alternative_standards_and_tools.md
+++ b/project/docs/alternative_standards_and_tools.md
@@ -1,7 +1,6 @@
# Slot: alternative_standards_and_tools
-
List of identifiers of standards and tools; those not explicitly planned to be used, by one or more Bridge2AI DGPs in addressing this use case but serving as viable alternatives, from those in the Standards Registry.
URI: [https://w3id.org/bridge2ai/standards-schema-all/alternative_standards_and_tools](https://w3id.org/bridge2ai/standards-schema-all/alternative_standards_and_tools)
diff --git a/project/docs/category.md b/project/docs/category.md
index db5d227..5b49012 100644
--- a/project/docs/category.md
+++ b/project/docs/category.md
@@ -1,7 +1,6 @@
# Slot: category
-
Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., "BiomedicalStandard".
URI: [https://w3id.org/bridge2ai/standards-schema-all/category](https://w3id.org/bridge2ai/standards-schema-all/category)
diff --git a/project/docs/collection.md b/project/docs/collection.md
index bf25318..aa69e8d 100644
--- a/project/docs/collection.md
+++ b/project/docs/collection.md
@@ -1,7 +1,6 @@
# Slot: collection
-
Tags for specific sets of standards.
URI: [https://w3id.org/bridge2ai/standards-schema-all/collection](https://w3id.org/bridge2ai/standards-schema-all/collection)
diff --git a/project/docs/concerns_data_topic.md b/project/docs/concerns_data_topic.md
index d934666..aed3529 100644
--- a/project/docs/concerns_data_topic.md
+++ b/project/docs/concerns_data_topic.md
@@ -1,7 +1,6 @@
# Slot: concerns_data_topic
-
Subject standard is generally applied in the context of object data topic.
URI: [https://w3id.org/bridge2ai/standards-schema-all/concerns_data_topic](https://w3id.org/bridge2ai/standards-schema-all/concerns_data_topic)
diff --git a/project/docs/contribution_date.md b/project/docs/contribution_date.md
index 1131233..34263fa 100644
--- a/project/docs/contribution_date.md
+++ b/project/docs/contribution_date.md
@@ -1,7 +1,6 @@
# Slot: contribution_date
-
The date on which the node was added.
URI: [https://w3id.org/bridge2ai/standards-schema-all/contribution_date](https://w3id.org/bridge2ai/standards-schema-all/contribution_date)
@@ -41,5 +40,4 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/contribution_date](https:/
| | | |
| --- | --- | --- |
-| **Examples:** | | Example(value='2023-03-20', description=None, object=None) |
-
+| **Examples:** | | Example({'value': '2023-03-20'}) |
\ No newline at end of file
diff --git a/project/docs/contributor_github_name.md b/project/docs/contributor_github_name.md
index 4491374..bf0bbb8 100644
--- a/project/docs/contributor_github_name.md
+++ b/project/docs/contributor_github_name.md
@@ -1,7 +1,6 @@
# Slot: contributor_github_name
-
The name of the github user who added this node.
URI: [https://w3id.org/bridge2ai/standards-schema-all/contributor_github_name](https://w3id.org/bridge2ai/standards-schema-all/contributor_github_name)
diff --git a/project/docs/contributor_name.md b/project/docs/contributor_name.md
index 146ee7f..ee7a256 100644
--- a/project/docs/contributor_name.md
+++ b/project/docs/contributor_name.md
@@ -1,7 +1,6 @@
# Slot: contributor_name
-
The name of the person who added this node.
URI: [https://w3id.org/bridge2ai/standards-schema-all/contributor_name](https://w3id.org/bridge2ai/standards-schema-all/contributor_name)
diff --git a/project/docs/contributor_orcid.md b/project/docs/contributor_orcid.md
index 3571b65..5049dca 100644
--- a/project/docs/contributor_orcid.md
+++ b/project/docs/contributor_orcid.md
@@ -1,7 +1,6 @@
# Slot: contributor_orcid
-
The ORCiD of the person who added this node.
URI: [https://w3id.org/bridge2ai/standards-schema-all/contributor_orcid](https://w3id.org/bridge2ai/standards-schema-all/contributor_orcid)
@@ -41,5 +40,4 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/contributor_orcid](https:/
| | | |
| --- | --- | --- |
-| **Examples:** | | Example(value='ORCID:0000-0001-1234-5678', description=None, object=None) |
-
+| **Examples:** | | Example({'value': 'ORCID:0000-0001-1234-5678'}) |
\ No newline at end of file
diff --git a/project/docs/data_standardortools_collection.md b/project/docs/data_standardortools_collection.md
index 8dc04b9..745de86 100644
--- a/project/docs/data_standardortools_collection.md
+++ b/project/docs/data_standardortools_collection.md
@@ -1,7 +1,6 @@
# Slot: data_standardortools_collection
-
Collection of associated data standards or tools
URI: [https://w3id.org/bridge2ai/standards-schema-all/data_standardortools_collection](https://w3id.org/bridge2ai/standards-schema-all/data_standardortools_collection)
diff --git a/project/docs/data_substrates.md b/project/docs/data_substrates.md
index 377b0ba..4e4c208 100644
--- a/project/docs/data_substrates.md
+++ b/project/docs/data_substrates.md
@@ -1,7 +1,6 @@
# Slot: data_substrates
-
Relevance of the use case to one or more data substrates.
URI: [https://w3id.org/bridge2ai/standards-schema-all/data_substrates](https://w3id.org/bridge2ai/standards-schema-all/data_substrates)
diff --git a/project/docs/data_substrates_collection.md b/project/docs/data_substrates_collection.md
index 6ec004b..02904b2 100644
--- a/project/docs/data_substrates_collection.md
+++ b/project/docs/data_substrates_collection.md
@@ -1,7 +1,6 @@
# Slot: data_substrates_collection
-
Collection of associated data substrates
URI: [https://w3id.org/bridge2ai/standards-schema-all/data_substrates_collection](https://w3id.org/bridge2ai/standards-schema-all/data_substrates_collection)
diff --git a/project/docs/data_topics.md b/project/docs/data_topics.md
index 97329c6..91a56e2 100644
--- a/project/docs/data_topics.md
+++ b/project/docs/data_topics.md
@@ -1,7 +1,6 @@
# Slot: data_topics
-
Relevance of the use case to one or more data topics.
URI: [https://w3id.org/bridge2ai/standards-schema-all/data_topics](https://w3id.org/bridge2ai/standards-schema-all/data_topics)
diff --git a/project/docs/data_topics_collection.md b/project/docs/data_topics_collection.md
index af8e42f..724e817 100644
--- a/project/docs/data_topics_collection.md
+++ b/project/docs/data_topics_collection.md
@@ -1,7 +1,6 @@
# Slot: data_topics_collection
-
Collection of associated data topics.
URI: [https://w3id.org/bridge2ai/standards-schema-all/data_topics_collection](https://w3id.org/bridge2ai/standards-schema-all/data_topics_collection)
diff --git a/project/docs/description.md b/project/docs/description.md
index 8fa4072..3ba156b 100644
--- a/project/docs/description.md
+++ b/project/docs/description.md
@@ -1,7 +1,6 @@
# Slot: description
-
A human-readable description for a thing.
URI: [https://w3id.org/bridge2ai/standards-schema-all/description](https://w3id.org/bridge2ai/standards-schema-all/description)
@@ -40,5 +39,4 @@ None → 0..1 [String](types/String.md)
| | | |
| --- | --- | --- |
-| **Mappings:** | | schema:description |
-
+| **Mappings:** | | schema:description |
\ No newline at end of file
diff --git a/project/docs/edam_id.md b/project/docs/edam_id.md
index 555bc98..3b836e7 100644
--- a/project/docs/edam_id.md
+++ b/project/docs/edam_id.md
@@ -1,7 +1,6 @@
# Slot: edam_id
-
Unique EDAM identifier
URI: [https://w3id.org/bridge2ai/standards-schema-all/edam_id](https://w3id.org/bridge2ai/standards-schema-all/edam_id)
@@ -26,5 +25,4 @@ None → 0..1 [EdamIdentifier](types/EdamIdentifier.md)
| | | |
| --- | --- | --- |
-| **Examples:** | | Example(value='edam.data:0006', description=None, object=None) |
-
+| **Examples:** | | Example({'value': 'edam.data:0006'}) |
\ No newline at end of file
diff --git a/project/docs/enables.md b/project/docs/enables.md
index 31400f0..a48dd45 100644
--- a/project/docs/enables.md
+++ b/project/docs/enables.md
@@ -1,7 +1,6 @@
# Slot: enables
-
Other use case(s) this use case supports or makes possible.
URI: [https://w3id.org/bridge2ai/standards-schema-all/enables](https://w3id.org/bridge2ai/standards-schema-all/enables)
diff --git a/project/docs/file_extensions.md b/project/docs/file_extensions.md
index 96f0a8f..bf91743 100644
--- a/project/docs/file_extensions.md
+++ b/project/docs/file_extensions.md
@@ -1,7 +1,6 @@
# Slot: file_extensions
-
Commonly used file extensions for this substrate.
URI: [https://w3id.org/bridge2ai/standards-schema-all/file_extensions](https://w3id.org/bridge2ai/standards-schema-all/file_extensions)
diff --git a/project/docs/formal_specification.md b/project/docs/formal_specification.md
index cf8fbe4..443f31d 100644
--- a/project/docs/formal_specification.md
+++ b/project/docs/formal_specification.md
@@ -1,7 +1,6 @@
# Slot: formal_specification
-
Relevant code repository or other location for a formal specification of the standard or tool. Often a URL, particularly to a Git repository.
URI: [https://w3id.org/bridge2ai/standards-schema-all/formal_specification](https://w3id.org/bridge2ai/standards-schema-all/formal_specification)
diff --git a/project/docs/has_relevant_organization.md b/project/docs/has_relevant_organization.md
index 5a73c9d..f480150 100644
--- a/project/docs/has_relevant_organization.md
+++ b/project/docs/has_relevant_organization.md
@@ -1,7 +1,6 @@
# Slot: has_relevant_organization
-
Subject standard is managed or otherwise guided buy the object organization(s).
URI: [https://w3id.org/bridge2ai/standards-schema-all/has_relevant_organization](https://w3id.org/bridge2ai/standards-schema-all/has_relevant_organization)
diff --git a/project/docs/has_training_resource.md b/project/docs/has_training_resource.md
new file mode 100644
index 0000000..ecee7c4
--- /dev/null
+++ b/project/docs/has_training_resource.md
@@ -0,0 +1,31 @@
+
+# Slot: has_training_resource
+
+Relevant training resources, standard usage manuals, or other documentation for the standard or tool.
+
+URI: [https://w3id.org/bridge2ai/standards-schema-all/has_training_resource](https://w3id.org/bridge2ai/standards-schema-all/has_training_resource)
+
+
+## Domain and Range
+
+[NamedThing](NamedThing.md) → 0..\* [DataStandardOrTool](DataStandardOrTool.md)
+
+## Parents
+
+ * is_a: [node_property](node_property.md)
+
+## Children
+
+
+## Used by
+
+ * [BiomedicalStandard](BiomedicalStandard.md)
+ * [DataStandard](DataStandard.md)
+ * [DataStandardOrTool](DataStandardOrTool.md)
+ * [ModelRepository](ModelRepository.md)
+ * [OntologyOrVocabulary](OntologyOrVocabulary.md)
+ * [ReferenceDataOrDataset](ReferenceDataOrDataset.md)
+ * [ReferenceImplementation](ReferenceImplementation.md)
+ * [Registry](Registry.md)
+ * [SoftwareOrTool](SoftwareOrTool.md)
+ * [TrainingProgram](TrainingProgram.md)
diff --git a/project/docs/id.md b/project/docs/id.md
index bad8503..a1ef4f7 100644
--- a/project/docs/id.md
+++ b/project/docs/id.md
@@ -1,7 +1,6 @@
# Slot: id
-
A unique identifier for a thing.
URI: [https://w3id.org/bridge2ai/standards-schema-all/id](https://w3id.org/bridge2ai/standards-schema-all/id)
@@ -40,5 +39,4 @@ None → 1..1 [Uriorcurie](types/Uriorcurie.md)
| | | |
| --- | --- | --- |
-| **Mappings:** | | schema:identifier |
-
+| **Mappings:** | | schema:identifier |
\ No newline at end of file
diff --git a/project/docs/involved_in_experimental_design.md b/project/docs/involved_in_experimental_design.md
index bf1a4e1..3cb0308 100644
--- a/project/docs/involved_in_experimental_design.md
+++ b/project/docs/involved_in_experimental_design.md
@@ -1,7 +1,6 @@
# Slot: involved_in_experimental_design
-
True if use case is likely to be implemented as part of an experimental procedure or collection of data to be used as part of an experiment.
URI: [https://w3id.org/bridge2ai/standards-schema-all/involved_in_experimental_design](https://w3id.org/bridge2ai/standards-schema-all/involved_in_experimental_design)
diff --git a/project/docs/involved_in_metadata_management.md b/project/docs/involved_in_metadata_management.md
index 9ab0f55..75cb907 100644
--- a/project/docs/involved_in_metadata_management.md
+++ b/project/docs/involved_in_metadata_management.md
@@ -1,7 +1,6 @@
# Slot: involved_in_metadata_management
-
True if use case is likely to be implemented as part of metadata indexing, sample tracking, or any other storage of high-level data properties. Includes use cases in which metadata will be collected along with data.
URI: [https://w3id.org/bridge2ai/standards-schema-all/involved_in_metadata_management](https://w3id.org/bridge2ai/standards-schema-all/involved_in_metadata_management)
diff --git a/project/docs/involved_in_quality_control.md b/project/docs/involved_in_quality_control.md
index 6220b11..9f83cae 100644
--- a/project/docs/involved_in_quality_control.md
+++ b/project/docs/involved_in_quality_control.md
@@ -1,7 +1,6 @@
# Slot: involved_in_quality_control
-
True is use case is likely to be implemented as part of data validation operations.
URI: [https://w3id.org/bridge2ai/standards-schema-all/involved_in_quality_control](https://w3id.org/bridge2ai/standards-schema-all/involved_in_quality_control)
diff --git a/project/docs/is_open.md b/project/docs/is_open.md
index 93bf0ff..749c531 100644
--- a/project/docs/is_open.md
+++ b/project/docs/is_open.md
@@ -1,7 +1,6 @@
# Slot: is_open
-
Is the standard or tool FAIR and available free of cost?
URI: [https://w3id.org/bridge2ai/standards-schema-all/is_open](https://w3id.org/bridge2ai/standards-schema-all/is_open)
diff --git a/project/docs/known_limitations.md b/project/docs/known_limitations.md
index 785f892..9d8f051 100644
--- a/project/docs/known_limitations.md
+++ b/project/docs/known_limitations.md
@@ -1,7 +1,6 @@
# Slot: known_limitations
-
Any current obstacles to implementing this use case. This could be a selection from one or more predefined categories including lack of standards, lack of relevant patient cohort, lack of funding, etc.
URI: [https://w3id.org/bridge2ai/standards-schema-all/known_limitations](https://w3id.org/bridge2ai/standards-schema-all/known_limitations)
diff --git a/project/docs/limitations.md b/project/docs/limitations.md
index 2748e4f..8d48730 100644
--- a/project/docs/limitations.md
+++ b/project/docs/limitations.md
@@ -1,7 +1,6 @@
# Slot: limitations
-
Potential obstacles particular to this substrate or implementation.
URI: [https://w3id.org/bridge2ai/standards-schema-all/limitations](https://w3id.org/bridge2ai/standards-schema-all/limitations)
diff --git a/project/docs/mesh_id.md b/project/docs/mesh_id.md
index b40cf27..86b4bd4 100644
--- a/project/docs/mesh_id.md
+++ b/project/docs/mesh_id.md
@@ -1,7 +1,6 @@
# Slot: mesh_id
-
Unique MeSH identifier
URI: [https://w3id.org/bridge2ai/standards-schema-all/mesh_id](https://w3id.org/bridge2ai/standards-schema-all/mesh_id)
@@ -26,5 +25,4 @@ None → 0..1 [MeshIdentifier](types/MeshIdentifier.md)
| | | |
| --- | --- | --- |
-| **Examples:** | | Example(value='MeSH:D014831', description=None, object=None) |
-
+| **Examples:** | | Example({'value': 'MeSH:D014831'}) |
\ No newline at end of file
diff --git a/project/docs/metadata_storage.md b/project/docs/metadata_storage.md
index b39ec92..bfad604 100644
--- a/project/docs/metadata_storage.md
+++ b/project/docs/metadata_storage.md
@@ -1,7 +1,6 @@
# Slot: metadata_storage
-
Data Substrate in which metadata is stored.
URI: [https://w3id.org/bridge2ai/standards-schema-all/metadata_storage](https://w3id.org/bridge2ai/standards-schema-all/metadata_storage)
diff --git a/project/docs/name.md b/project/docs/name.md
index 968061a..b9f2f73 100644
--- a/project/docs/name.md
+++ b/project/docs/name.md
@@ -1,7 +1,6 @@
# Slot: name
-
A human-readable name for a thing.
URI: [https://w3id.org/bridge2ai/standards-schema-all/name](https://w3id.org/bridge2ai/standards-schema-all/name)
@@ -40,5 +39,4 @@ None → 0..1 [String](types/String.md)
| | | |
| --- | --- | --- |
-| **Mappings:** | | schema:name |
-
+| **Mappings:** | | schema:name |
\ No newline at end of file
diff --git a/project/docs/ncit_id.md b/project/docs/ncit_id.md
index 8873b6a..2900ee2 100644
--- a/project/docs/ncit_id.md
+++ b/project/docs/ncit_id.md
@@ -1,7 +1,6 @@
# Slot: ncit_id
-
Unique NCIt Identifier
URI: [https://w3id.org/bridge2ai/standards-schema-all/ncit_id](https://w3id.org/bridge2ai/standards-schema-all/ncit_id)
@@ -26,5 +25,4 @@ None → 0..1 [NcitIdentifier](types/NcitIdentifier.md)
| | | |
| --- | --- | --- |
-| **Examples:** | | Example(value='NCIT:C92692', description=None, object=None) |
-
+| **Examples:** | | Example({'value': 'NCIT:C92692'}) |
\ No newline at end of file
diff --git a/project/docs/node_property.md b/project/docs/node_property.md
index 34462db..994671c 100644
--- a/project/docs/node_property.md
+++ b/project/docs/node_property.md
@@ -1,7 +1,6 @@
# Slot: node_property
-
A grouping for any property that holds between a node and a value.
URI: [https://w3id.org/bridge2ai/standards-schema-all/node_property](https://w3id.org/bridge2ai/standards-schema-all/node_property)
@@ -27,6 +26,7 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/node_property](https://w3i
* [enables](enables.md)
* [file_extensions](file_extensions.md)
* [formal_specification](formal_specification.md)
+ * [has_training_resource](has_training_resource.md)
* [involved_in_experimental_design](involved_in_experimental_design.md)
* [involved_in_metadata_management](involved_in_metadata_management.md)
* [involved_in_quality_control](involved_in_quality_control.md)
diff --git a/project/docs/not_relevant_to_dgps.md b/project/docs/not_relevant_to_dgps.md
index 7e647e4..3bce6aa 100644
--- a/project/docs/not_relevant_to_dgps.md
+++ b/project/docs/not_relevant_to_dgps.md
@@ -1,7 +1,6 @@
# Slot: not_relevant_to_dgps
-
Is the standard or tool currently relevant to DGPs?
URI: [https://w3id.org/bridge2ai/standards-schema-all/not_relevant_to_dgps](https://w3id.org/bridge2ai/standards-schema-all/not_relevant_to_dgps)
diff --git a/project/docs/organizations.md b/project/docs/organizations.md
index 29e85e7..67ba91a 100644
--- a/project/docs/organizations.md
+++ b/project/docs/organizations.md
@@ -1,7 +1,6 @@
# Slot: organizations
-
Collection of associated organizations.
URI: [https://w3id.org/bridge2ai/standards-schema-all/organizations](https://w3id.org/bridge2ai/standards-schema-all/organizations)
diff --git a/project/docs/publication.md b/project/docs/publication.md
index 99cbe8b..5e451cf 100644
--- a/project/docs/publication.md
+++ b/project/docs/publication.md
@@ -1,7 +1,6 @@
# Slot: publication
-
Relevant publication for the standard or tool. Prefer a DOI or PUBMED.
URI: [https://w3id.org/bridge2ai/standards-schema-all/publication](https://w3id.org/bridge2ai/standards-schema-all/publication)
diff --git a/project/docs/purpose_detail.md b/project/docs/purpose_detail.md
index 0b71aa9..33906d9 100644
--- a/project/docs/purpose_detail.md
+++ b/project/docs/purpose_detail.md
@@ -1,7 +1,6 @@
# Slot: purpose_detail
-
Text description of the standard or tool.
URI: [https://w3id.org/bridge2ai/standards-schema-all/purpose_detail](https://w3id.org/bridge2ai/standards-schema-all/purpose_detail)
diff --git a/project/docs/related_to.md b/project/docs/related_to.md
index fa9d81b..02f00f4 100644
--- a/project/docs/related_to.md
+++ b/project/docs/related_to.md
@@ -1,7 +1,6 @@
# Slot: related_to
-
A relationship that is asserted between two named things.
URI: [https://w3id.org/bridge2ai/standards-schema-all/related_to](https://w3id.org/bridge2ai/standards-schema-all/related_to)
diff --git a/project/docs/relevance_to_dgps.md b/project/docs/relevance_to_dgps.md
index cdffe69..752c5e2 100644
--- a/project/docs/relevance_to_dgps.md
+++ b/project/docs/relevance_to_dgps.md
@@ -1,7 +1,6 @@
# Slot: relevance_to_dgps
-
Relevance of the use case to one or more DGPs.
URI: [https://w3id.org/bridge2ai/standards-schema-all/relevance_to_dgps](https://w3id.org/bridge2ai/standards-schema-all/relevance_to_dgps)
diff --git a/project/docs/requires_registration.md b/project/docs/requires_registration.md
index 9cbad5e..0a2fe31 100644
--- a/project/docs/requires_registration.md
+++ b/project/docs/requires_registration.md
@@ -1,8 +1,7 @@
# Slot: requires_registration
-
-Does usage of the standard or tool require registrion of a user or group with some organization or managerial body?
+Does usage of the standard or tool require registration of a user or group with some organization or managerial body?
URI: [https://w3id.org/bridge2ai/standards-schema-all/requires_registration](https://w3id.org/bridge2ai/standards-schema-all/requires_registration)
diff --git a/project/docs/ror_id.md b/project/docs/ror_id.md
index 27b12ef..9303a47 100644
--- a/project/docs/ror_id.md
+++ b/project/docs/ror_id.md
@@ -1,7 +1,6 @@
# Slot: ror_id
-
Unique ROR identifier.
URI: [https://w3id.org/bridge2ai/standards-schema-all/ror_id](https://w3id.org/bridge2ai/standards-schema-all/ror_id)
@@ -25,5 +24,4 @@ None → 0..1 [RorIdentifier](types/RorIdentifier.md)
| | | |
| --- | --- | --- |
-| **Examples:** | | Example(value='ROR:02mp31p96', description=None, object=None) |
-
+| **Examples:** | | Example({'value': 'ROR:02mp31p96'}) |
\ No newline at end of file
diff --git a/project/docs/standards_and_tools_for_dgp_use.md b/project/docs/standards_and_tools_for_dgp_use.md
index 0807e70..1d91580 100644
--- a/project/docs/standards_and_tools_for_dgp_use.md
+++ b/project/docs/standards_and_tools_for_dgp_use.md
@@ -1,7 +1,6 @@
# Slot: standards_and_tools_for_dgp_use
-
List of identifiers of standards and tools; those planned to be used, or already in use, by one or more Bridge2AI DGPs in addressing this use case, from those in the Standards Registry, or TBD if standards/tools not yet finalized for this use case.
URI: [https://w3id.org/bridge2ai/standards-schema-all/standards_and_tools_for_dgp_use](https://w3id.org/bridge2ai/standards-schema-all/standards_and_tools_for_dgp_use)
diff --git a/project/docs/standards_schema_all.md b/project/docs/standards_schema_all.md
index 2e7f7ef..89ef52b 100644
--- a/project/docs/standards_schema_all.md
+++ b/project/docs/standards_schema_all.md
@@ -20,7 +20,7 @@ High-level classes for Bridge2AI Standards schemas.
* [DataStandardOrTool](DataStandardOrTool.md) - Represents a standard or tool in the Bridge2AI Standards Registry.
* [DataStandard](DataStandard.md) - Represents a general purpose standard in the Bridge2AI Standards Registry.
* [BiomedicalStandard](BiomedicalStandard.md) - Represents a standard in the Bridge2AI Standards Registry with particular applications or relevance to clinical or biomedical research purposes.
- * [ModelRepository](ModelRepository.md) - Represents a resource in the Bridge2AI Standards Registry serving to curate and store computational models. To be a respository, the resource must not index models alone.
+ * [ModelRepository](ModelRepository.md) - Represents a resource in the Bridge2AI Standards Registry serving to curate and store computational models. To be a repository, the resource must not index models alone.
* [OntologyOrVocabulary](OntologyOrVocabulary.md) - A set of concepts and categories, potentially defined or accompanied by their hierarchical relationships.
* [ReferenceDataOrDataset](ReferenceDataOrDataset.md) - Represents a resource in the Bridge2AI Standards Registry serving as a standardized, reusable data source.
* [ReferenceImplementation](ReferenceImplementation.md) - Represents an implementation of one or more standards or tools in the Bridge2AI Standards Registry, whether as a full specification in a particular language or as an application to a specific use case.
@@ -60,6 +60,7 @@ High-level classes for Bridge2AI Standards schemas.
* [enables](enables.md) - Other use case(s) this use case supports or makes possible.
* [file_extensions](file_extensions.md) - Commonly used file extensions for this substrate.
* [formal_specification](formal_specification.md) - Relevant code repository or other location for a formal specification of the standard or tool. Often a URL, particularly to a Git repository.
+ * [has_training_resource](has_training_resource.md) - Relevant training resources, standard usage manuals, or other documentation for the standard or tool.
* [involved_in_experimental_design](involved_in_experimental_design.md) - True if use case is likely to be implemented as part of an experimental procedure or collection of data to be used as part of an experiment.
* [involved_in_metadata_management](involved_in_metadata_management.md) - True if use case is likely to be implemented as part of metadata indexing, sample tracking, or any other storage of high-level data properties. Includes use cases in which metadata will be collected along with data.
* [involved_in_quality_control](involved_in_quality_control.md) - True is use case is likely to be implemented as part of data validation operations.
@@ -70,7 +71,7 @@ High-level classes for Bridge2AI Standards schemas.
* [not_relevant_to_dgps](not_relevant_to_dgps.md) - Is the standard or tool currently relevant to DGPs?
* [publication](publication.md) - Relevant publication for the standard or tool. Prefer a DOI or PUBMED.
* [purpose_detail](purpose_detail.md) - Text description of the standard or tool.
- * [requires_registration](requires_registration.md) - Does usage of the standard or tool require registrion of a user or group with some organization or managerial body?
+ * [requires_registration](requires_registration.md) - Does usage of the standard or tool require registration of a user or group with some organization or managerial body?
* [standards_and_tools_for_dgp_use](standards_and_tools_for_dgp_use.md) - List of identifiers of standards and tools; those planned to be used, or already in use, by one or more Bridge2AI DGPs in addressing this use case, from those in the Standards Registry, or TBD if standards/tools not yet finalized for this use case.
* [url](url.md) - URL for basic documentation of the standard or tool.
* [use_case_category](use_case_category.md) - Category of the UseCase. Not all projects will incorporate use cases in all categories.
diff --git a/project/docs/subclass_of.md b/project/docs/subclass_of.md
index 6770883..8dccd9b 100644
--- a/project/docs/subclass_of.md
+++ b/project/docs/subclass_of.md
@@ -1,7 +1,6 @@
# Slot: subclass_of
-
Holds between two classes where the domain class is a specialization of the range class.
URI: [https://w3id.org/bridge2ai/standards-schema-all/subclass_of](https://w3id.org/bridge2ai/standards-schema-all/subclass_of)
@@ -43,5 +42,4 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/subclass_of](https://w3id.
| --- | --- | --- |
| **Exact Mappings:** | | rdfs:subClassOf |
| | | MESH:isa |
-| **Narrow Mappings:** | | rdfs:subPropertyOf |
-
+| **Narrow Mappings:** | | rdfs:subPropertyOf |
\ No newline at end of file
diff --git a/project/docs/topic_involves_anatomy.md b/project/docs/topic_involves_anatomy.md
index 23a8c44..acf9749 100644
--- a/project/docs/topic_involves_anatomy.md
+++ b/project/docs/topic_involves_anatomy.md
@@ -1,7 +1,6 @@
# Slot: topic_involves_anatomy
-
A relationship between a DataTopic and an anatomical entity.
URI: [https://w3id.org/bridge2ai/standards-schema-all/topic_involves_anatomy](https://w3id.org/bridge2ai/standards-schema-all/topic_involves_anatomy)
@@ -26,5 +25,4 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/topic_involves_anatomy](ht
| | | |
| --- | --- | --- |
-| **Exact Mappings:** | | RO:0004026 |
-
+| **Exact Mappings:** | | RO:0004026 |
\ No newline at end of file
diff --git a/project/docs/type.md b/project/docs/type.md
index 19b4512..b21f88f 100644
--- a/project/docs/type.md
+++ b/project/docs/type.md
@@ -1,7 +1,6 @@
# Slot: type
-
A generic slot for any label corresponding to the label for an entity type associated to the class.
URI: [https://w3id.org/bridge2ai/standards-schema-all/type](https://w3id.org/bridge2ai/standards-schema-all/type)
diff --git a/project/docs/types/Boolean.md b/project/docs/types/Boolean.md
index dc83a9c..fc97222 100644
--- a/project/docs/types/Boolean.md
+++ b/project/docs/types/Boolean.md
@@ -1,7 +1,6 @@
# Type: boolean
-
A binary (true or false) value
URI: [linkml:Boolean](https://w3id.org/linkml/Boolean)
@@ -16,4 +15,3 @@ URI: [linkml:Boolean](https://w3id.org/linkml/Boolean)
| | | |
| --- | --- | --- |
| **Exact Mappings:** | | schema:Boolean |
-
diff --git a/project/docs/types/CategoryType.md b/project/docs/types/CategoryType.md
index b4e345c..7d96b60 100644
--- a/project/docs/types/CategoryType.md
+++ b/project/docs/types/CategoryType.md
@@ -1,7 +1,6 @@
# Type: category_type
-
A primitive type in which the value denotes a class within the model.
URI: [B2AI:CategoryType](https://w3id.org/bridge2ai/standards-schema/CategoryType)
diff --git a/project/docs/types/Curie.md b/project/docs/types/Curie.md
index c1803f9..b28741b 100644
--- a/project/docs/types/Curie.md
+++ b/project/docs/types/Curie.md
@@ -1,7 +1,6 @@
# Type: curie
-
a compact URI
URI: [linkml:Curie](https://w3id.org/linkml/Curie)
@@ -17,4 +16,3 @@ URI: [linkml:Curie](https://w3id.org/linkml/Curie)
| --- | --- | --- |
| **Comments:** | | in RDF serializations this MUST be expanded to a URI |
| | | in non-RDF serializations MAY be serialized as the compact representation |
-
diff --git a/project/docs/types/Date.md b/project/docs/types/Date.md
index 06948af..0c0ca29 100644
--- a/project/docs/types/Date.md
+++ b/project/docs/types/Date.md
@@ -1,7 +1,6 @@
# Type: date
-
a date (year, month and day) in an idealized calendar
URI: [linkml:Date](https://w3id.org/linkml/Date)
@@ -16,4 +15,3 @@ URI: [linkml:Date](https://w3id.org/linkml/Date)
| | | |
| --- | --- | --- |
| **Exact Mappings:** | | schema:Date |
-
diff --git a/project/docs/types/DateOrDatetime.md b/project/docs/types/DateOrDatetime.md
index ef98389..d16623f 100644
--- a/project/docs/types/DateOrDatetime.md
+++ b/project/docs/types/DateOrDatetime.md
@@ -1,7 +1,6 @@
# Type: date_or_datetime
-
Either a date or a datetime
URI: [linkml:DateOrDatetime](https://w3id.org/linkml/DateOrDatetime)
diff --git a/project/docs/types/Datetime.md b/project/docs/types/Datetime.md
index 9510454..432955c 100644
--- a/project/docs/types/Datetime.md
+++ b/project/docs/types/Datetime.md
@@ -1,7 +1,6 @@
# Type: datetime
-
The combination of a date and time
URI: [linkml:Datetime](https://w3id.org/linkml/Datetime)
@@ -16,4 +15,3 @@ URI: [linkml:Datetime](https://w3id.org/linkml/Datetime)
| | | |
| --- | --- | --- |
| **Exact Mappings:** | | schema:DateTime |
-
diff --git a/project/docs/types/Decimal.md b/project/docs/types/Decimal.md
index a7ba14a..164eb96 100644
--- a/project/docs/types/Decimal.md
+++ b/project/docs/types/Decimal.md
@@ -1,7 +1,6 @@
# Type: decimal
-
A real number with arbitrary precision that conforms to the xsd:decimal specification
URI: [linkml:Decimal](https://w3id.org/linkml/Decimal)
@@ -15,4 +14,3 @@ URI: [linkml:Decimal](https://w3id.org/linkml/Decimal)
| | | |
| --- | --- | --- |
| **Broad Mappings:** | | schema:Number |
-
diff --git a/project/docs/types/Double.md b/project/docs/types/Double.md
index cfe6d71..b08fe52 100644
--- a/project/docs/types/Double.md
+++ b/project/docs/types/Double.md
@@ -1,7 +1,6 @@
# Type: double
-
A real number that conforms to the xsd:double specification
URI: [linkml:Double](https://w3id.org/linkml/Double)
@@ -15,4 +14,3 @@ URI: [linkml:Double](https://w3id.org/linkml/Double)
| | | |
| --- | --- | --- |
| **Close Mappings:** | | schema:Float |
-
diff --git a/project/docs/types/EdamIdentifier.md b/project/docs/types/EdamIdentifier.md
index 4366a9f..62ac8d8 100644
--- a/project/docs/types/EdamIdentifier.md
+++ b/project/docs/types/EdamIdentifier.md
@@ -1,7 +1,6 @@
# Type: edam_identifier
-
Identifier from EDAM ontology
URI: [B2AI:EdamIdentifier](https://w3id.org/bridge2ai/standards-schema/EdamIdentifier)
diff --git a/project/docs/types/Float.md b/project/docs/types/Float.md
index 7b303f9..b473c2b 100644
--- a/project/docs/types/Float.md
+++ b/project/docs/types/Float.md
@@ -1,7 +1,6 @@
# Type: float
-
A real number that conforms to the xsd:float specification
URI: [linkml:Float](https://w3id.org/linkml/Float)
@@ -15,4 +14,3 @@ URI: [linkml:Float](https://w3id.org/linkml/Float)
| | | |
| --- | --- | --- |
| **Exact Mappings:** | | schema:Float |
-
diff --git a/project/docs/types/Integer.md b/project/docs/types/Integer.md
index 3cfcc66..12290d4 100644
--- a/project/docs/types/Integer.md
+++ b/project/docs/types/Integer.md
@@ -1,7 +1,6 @@
# Type: integer
-
An integer
URI: [linkml:Integer](https://w3id.org/linkml/Integer)
@@ -15,4 +14,3 @@ URI: [linkml:Integer](https://w3id.org/linkml/Integer)
| | | |
| --- | --- | --- |
| **Exact Mappings:** | | schema:Integer |
-
diff --git a/project/docs/types/Jsonpath.md b/project/docs/types/Jsonpath.md
index a03a58e..c35a38f 100644
--- a/project/docs/types/Jsonpath.md
+++ b/project/docs/types/Jsonpath.md
@@ -1,7 +1,6 @@
# Type: jsonpath
-
A string encoding a JSON Path. The value of the string MUST conform to JSON Point syntax and SHOULD dereference to zero or more valid objects within the current instance document when encoded in tree form.
URI: [linkml:Jsonpath](https://w3id.org/linkml/Jsonpath)
diff --git a/project/docs/types/Jsonpointer.md b/project/docs/types/Jsonpointer.md
index a0e1ac4..f3460de 100644
--- a/project/docs/types/Jsonpointer.md
+++ b/project/docs/types/Jsonpointer.md
@@ -1,7 +1,6 @@
# Type: jsonpointer
-
A string encoding a JSON Pointer. The value of the string MUST conform to JSON Point syntax and SHOULD dereference to a valid object within the current instance document when encoded in tree form.
URI: [linkml:Jsonpointer](https://w3id.org/linkml/Jsonpointer)
diff --git a/project/docs/types/MeshIdentifier.md b/project/docs/types/MeshIdentifier.md
index 3accf09..3086090 100644
--- a/project/docs/types/MeshIdentifier.md
+++ b/project/docs/types/MeshIdentifier.md
@@ -1,7 +1,6 @@
# Type: mesh_identifier
-
Identifier from Medical Subject Headings (MeSH) biomedical vocabulary.
URI: [B2AI:MeshIdentifier](https://w3id.org/bridge2ai/standards-schema/MeshIdentifier)
diff --git a/project/docs/types/NcitIdentifier.md b/project/docs/types/NcitIdentifier.md
index f25e0fd..f4b4f94 100644
--- a/project/docs/types/NcitIdentifier.md
+++ b/project/docs/types/NcitIdentifier.md
@@ -1,7 +1,6 @@
# Type: ncit_identifier
-
Identifier from NCIT reference terminology with broad coverage of the cancer domain.
URI: [B2AI:NcitIdentifier](https://w3id.org/bridge2ai/standards-schema/NcitIdentifier)
diff --git a/project/docs/types/Ncname.md b/project/docs/types/Ncname.md
index 710b0b0..317223f 100644
--- a/project/docs/types/Ncname.md
+++ b/project/docs/types/Ncname.md
@@ -1,7 +1,6 @@
# Type: ncname
-
Prefix part of CURIE
URI: [linkml:Ncname](https://w3id.org/linkml/Ncname)
diff --git a/project/docs/types/Nodeidentifier.md b/project/docs/types/Nodeidentifier.md
index f0097cd..d30c3e8 100644
--- a/project/docs/types/Nodeidentifier.md
+++ b/project/docs/types/Nodeidentifier.md
@@ -1,7 +1,6 @@
# Type: nodeidentifier
-
A URI, CURIE or BNODE that represents a node in a model.
URI: [linkml:Nodeidentifier](https://w3id.org/linkml/Nodeidentifier)
diff --git a/project/docs/types/Objectidentifier.md b/project/docs/types/Objectidentifier.md
index 454ba6b..c2850b7 100644
--- a/project/docs/types/Objectidentifier.md
+++ b/project/docs/types/Objectidentifier.md
@@ -1,7 +1,6 @@
# Type: objectidentifier
-
A URI or CURIE that represents an object in the model.
URI: [linkml:Objectidentifier](https://w3id.org/linkml/Objectidentifier)
@@ -16,4 +15,3 @@ URI: [linkml:Objectidentifier](https://w3id.org/linkml/Objectidentifier)
| | | |
| --- | --- | --- |
| **Comments:** | | Used for inheritance and type checking |
-
diff --git a/project/docs/types/RorIdentifier.md b/project/docs/types/RorIdentifier.md
index 1f29f7e..eb2b116 100644
--- a/project/docs/types/RorIdentifier.md
+++ b/project/docs/types/RorIdentifier.md
@@ -1,7 +1,6 @@
# Type: ror_identifier
-
Identifier from Research Organization Registry.
URI: [B2AI_ORG:RorIdentifier](https://w3id.org/bridge2ai/standards-organization-schema/RorIdentifier)
diff --git a/project/docs/types/Sparqlpath.md b/project/docs/types/Sparqlpath.md
index fd99a92..7f03b24 100644
--- a/project/docs/types/Sparqlpath.md
+++ b/project/docs/types/Sparqlpath.md
@@ -1,7 +1,6 @@
# Type: sparqlpath
-
A string encoding a SPARQL Property Path. The value of the string MUST conform to SPARQL syntax and SHOULD dereference to zero or more valid objects within the current instance document when encoded as RDF.
URI: [linkml:Sparqlpath](https://w3id.org/linkml/Sparqlpath)
diff --git a/project/docs/types/String.md b/project/docs/types/String.md
index 6e61d70..8313e14 100644
--- a/project/docs/types/String.md
+++ b/project/docs/types/String.md
@@ -1,7 +1,6 @@
# Type: string
-
A character string
URI: [linkml:String](https://w3id.org/linkml/String)
@@ -15,4 +14,3 @@ URI: [linkml:String](https://w3id.org/linkml/String)
| | | |
| --- | --- | --- |
| **Exact Mappings:** | | schema:Text |
-
diff --git a/project/docs/types/Time.md b/project/docs/types/Time.md
index 2b8652b..76bb966 100644
--- a/project/docs/types/Time.md
+++ b/project/docs/types/Time.md
@@ -1,7 +1,6 @@
# Type: time
-
A time object represents a (local) time of day, independent of any particular day
URI: [linkml:Time](https://w3id.org/linkml/Time)
@@ -16,4 +15,3 @@ URI: [linkml:Time](https://w3id.org/linkml/Time)
| | | |
| --- | --- | --- |
| **Exact Mappings:** | | schema:Time |
-
diff --git a/project/docs/types/Uri.md b/project/docs/types/Uri.md
index 343807a..fbb5431 100644
--- a/project/docs/types/Uri.md
+++ b/project/docs/types/Uri.md
@@ -1,7 +1,6 @@
# Type: uri
-
a complete URI
URI: [linkml:Uri](https://w3id.org/linkml/Uri)
@@ -17,4 +16,3 @@ URI: [linkml:Uri](https://w3id.org/linkml/Uri)
| --- | --- | --- |
| **Comments:** | | in RDF serializations a slot with range of uri is treated as a literal or type xsd:anyURI unless it is an identifier or a reference to an identifier, in which case it is translated directly to a node |
| **Close Mappings:** | | schema:URL |
-
diff --git a/project/docs/types/Uriorcurie.md b/project/docs/types/Uriorcurie.md
index 2f7b650..edba484 100644
--- a/project/docs/types/Uriorcurie.md
+++ b/project/docs/types/Uriorcurie.md
@@ -1,7 +1,6 @@
# Type: uriorcurie
-
a URI or a CURIE
URI: [linkml:Uriorcurie](https://w3id.org/linkml/Uriorcurie)
diff --git a/project/docs/types/WikidataIdentifier.md b/project/docs/types/WikidataIdentifier.md
index 212bd67..8b839e7 100644
--- a/project/docs/types/WikidataIdentifier.md
+++ b/project/docs/types/WikidataIdentifier.md
@@ -1,7 +1,6 @@
# Type: wikidata_identifier
-
Identifier from Wikidata open knowledge base.
URI: [B2AI_ORG:WikidataIdentifier](https://w3id.org/bridge2ai/standards-organization-schema/WikidataIdentifier)
diff --git a/project/docs/url.md b/project/docs/url.md
index 4f7bb4b..341a4f8 100644
--- a/project/docs/url.md
+++ b/project/docs/url.md
@@ -1,7 +1,6 @@
# Slot: url
-
URL for basic documentation of the standard or tool.
URI: [https://w3id.org/bridge2ai/standards-schema-all/url](https://w3id.org/bridge2ai/standards-schema-all/url)
diff --git a/project/docs/use_case_category.md b/project/docs/use_case_category.md
index fe36167..1264e1d 100644
--- a/project/docs/use_case_category.md
+++ b/project/docs/use_case_category.md
@@ -1,7 +1,6 @@
# Slot: use_case_category
-
Category of the UseCase. Not all projects will incorporate use cases in all categories.
URI: [https://w3id.org/bridge2ai/standards-schema-all/use_case_category](https://w3id.org/bridge2ai/standards-schema-all/use_case_category)
diff --git a/project/docs/use_cases.md b/project/docs/use_cases.md
index c43d2f9..ab8edd0 100644
--- a/project/docs/use_cases.md
+++ b/project/docs/use_cases.md
@@ -1,7 +1,6 @@
# Slot: use_cases
-
Collection of associated use cases
URI: [https://w3id.org/bridge2ai/standards-schema-all/use_cases](https://w3id.org/bridge2ai/standards-schema-all/use_cases)
diff --git a/project/docs/use_conditions.md b/project/docs/use_conditions.md
index d6d18cf..4da4f4b 100644
--- a/project/docs/use_conditions.md
+++ b/project/docs/use_conditions.md
@@ -1,7 +1,6 @@
# Slot: use_conditions
-
Applicable conditions on use, as defined by the Data Use Ontology (DUO).
URI: [https://w3id.org/bridge2ai/standards-schema-all/use_conditions](https://w3id.org/bridge2ai/standards-schema-all/use_conditions)
diff --git a/project/docs/wikidata_id.md b/project/docs/wikidata_id.md
index 6ac7a55..5e159aa 100644
--- a/project/docs/wikidata_id.md
+++ b/project/docs/wikidata_id.md
@@ -1,7 +1,6 @@
# Slot: wikidata_id
-
Unique Wikidata identifier.
URI: [https://w3id.org/bridge2ai/standards-schema-all/wikidata_id](https://w3id.org/bridge2ai/standards-schema-all/wikidata_id)
@@ -25,5 +24,4 @@ None → 0..1 [WikidataIdentifier](types/WikidataIdentifier.md)
| | | |
| --- | --- | --- |
-| **Examples:** | | Example(value='WIKIDATA:Q282186', description=None, object=None) |
-
+| **Examples:** | | Example({'value': 'WIKIDATA:Q282186'}) |
\ No newline at end of file
diff --git a/project/docs/xref.md b/project/docs/xref.md
index 488ad54..656e8da 100644
--- a/project/docs/xref.md
+++ b/project/docs/xref.md
@@ -1,7 +1,6 @@
# Slot: xref
-
URI of corresponding class in an ontology of experimental procedures, in CURIE form.
URI: [https://w3id.org/bridge2ai/standards-schema-all/xref](https://w3id.org/bridge2ai/standards-schema-all/xref)
@@ -28,5 +27,4 @@ URI: [https://w3id.org/bridge2ai/standards-schema-all/xref](https://w3id.org/bri
| --- | --- | --- |
| **Aliases:** | | dbxref |
| | | Dbxref |
-| | | DbXref |
-
+| | | DbXref |
\ No newline at end of file
diff --git a/project/excel/standards_schema_all.xlsx b/project/excel/standards_schema_all.xlsx
index 2826d17..3f12df3 100644
Binary files a/project/excel/standards_schema_all.xlsx and b/project/excel/standards_schema_all.xlsx differ
diff --git a/project/graphql/standards_schema_all.graphql b/project/graphql/standards_schema_all.graphql
index 7944486..ad4440a 100644
--- a/project/graphql/standards_schema_all.graphql
+++ b/project/graphql/standards_schema_all.graphql
@@ -1,3 +1,61 @@
+# metamodel_version: 1.7.0
+enum DataGeneratingProject
+ {
+ aireadi
+ chorus
+ cm4ai
+ voice
+ }
+
+enum StandardsCollectionTag
+ {
+ audiovisual
+ deprecated
+ fileformat
+ toolkit
+ clinicaldata
+ multimodal
+ text
+ cloudplatform
+ cloudservice
+ codesystem
+ datamodel
+ dataregistry
+ softwareregistry
+ datavisualization
+ notebookplatform
+ datasheets
+ machinelearningframework
+ workflowlanguage
+ diagnosticinstrument
+ drugdata
+ eyedata
+ markuplanguage
+ graphdataplatform
+ guidelines
+ minimuminformationschema
+ modelcards
+ obofoundry
+ ontologyregistry
+ policy
+ proteindata
+ referencegenome
+ scrnaseqanalysis
+ speechdata
+ standardsregistry
+ has_ai_application
+ }
+
+enum UseCaseCategory
+ {
+ acquisition
+ integration
+ standardization
+ modeling
+ application
+ assessment
+ }
+
type AnatomicalEntity
{
id: Uriorcurie!
@@ -27,6 +85,7 @@ type BiomedicalStandard
collection: [StandardsCollectionTag]
concernsDataTopic: [DataTopic]
hasRelevantOrganization: [Organization]
+ hasTrainingResource: [DataStandardOrTool]
purposeDetail: String
isOpen: Boolean
requiresRegistration: Boolean
@@ -51,6 +110,7 @@ type DataStandard
collection: [StandardsCollectionTag]
concernsDataTopic: [DataTopic]
hasRelevantOrganization: [Organization]
+ hasTrainingResource: [DataStandardOrTool]
purposeDetail: String
isOpen: Boolean
requiresRegistration: Boolean
@@ -75,6 +135,7 @@ type DataStandardOrTool
collection: [StandardsCollectionTag]
concernsDataTopic: [DataTopic]
hasRelevantOrganization: [Organization]
+ hasTrainingResource: [DataStandardOrTool]
purposeDetail: String
isOpen: Boolean
requiresRegistration: Boolean
@@ -152,6 +213,7 @@ type ModelRepository
collection: [StandardsCollectionTag]
concernsDataTopic: [DataTopic]
hasRelevantOrganization: [Organization]
+ hasTrainingResource: [DataStandardOrTool]
purposeDetail: String
isOpen: Boolean
requiresRegistration: Boolean
@@ -190,6 +252,7 @@ type OntologyOrVocabulary
collection: [StandardsCollectionTag]
concernsDataTopic: [DataTopic]
hasRelevantOrganization: [Organization]
+ hasTrainingResource: [DataStandardOrTool]
purposeDetail: String
isOpen: Boolean
requiresRegistration: Boolean
@@ -236,6 +299,7 @@ type ReferenceDataOrDataset
collection: [StandardsCollectionTag]
concernsDataTopic: [DataTopic]
hasRelevantOrganization: [Organization]
+ hasTrainingResource: [DataStandardOrTool]
purposeDetail: String
isOpen: Boolean
requiresRegistration: Boolean
@@ -260,6 +324,7 @@ type ReferenceImplementation
collection: [StandardsCollectionTag]
concernsDataTopic: [DataTopic]
hasRelevantOrganization: [Organization]
+ hasTrainingResource: [DataStandardOrTool]
purposeDetail: String
isOpen: Boolean
requiresRegistration: Boolean
@@ -284,6 +349,7 @@ type Registry
collection: [StandardsCollectionTag]
concernsDataTopic: [DataTopic]
hasRelevantOrganization: [Organization]
+ hasTrainingResource: [DataStandardOrTool]
purposeDetail: String
isOpen: Boolean
requiresRegistration: Boolean
@@ -308,6 +374,7 @@ type SoftwareOrTool
collection: [StandardsCollectionTag]
concernsDataTopic: [DataTopic]
hasRelevantOrganization: [Organization]
+ hasTrainingResource: [DataStandardOrTool]
purposeDetail: String
isOpen: Boolean
requiresRegistration: Boolean
@@ -332,6 +399,7 @@ type TrainingProgram
collection: [StandardsCollectionTag]
concernsDataTopic: [DataTopic]
hasRelevantOrganization: [Organization]
+ hasTrainingResource: [DataStandardOrTool]
purposeDetail: String
isOpen: Boolean
requiresRegistration: Boolean
diff --git a/project/jsonld/standards_schema_all.context.jsonld b/project/jsonld/standards_schema_all.context.jsonld
index ac01915..0ece4c5 100644
--- a/project/jsonld/standards_schema_all.context.jsonld
+++ b/project/jsonld/standards_schema_all.context.jsonld
@@ -1,10 +1,11 @@
{
"comments": {
"description": "Auto generated by LinkML jsonld context generator",
- "generation_date": "2024-11-04T17:40:38",
+ "generation_date": "2024-11-18T17:25:29",
"source": "standards_schema_all.yaml"
},
"@context": {
+ "xsd": "http://www.w3.org/2001/XMLSchema#",
"B2AI": "https://w3id.org/bridge2ai/standards-schema/",
"B2AI_ORG": "https://w3id.org/bridge2ai/standards-organization-schema/",
"B2AI_STANDARD": "https://w3id.org/bridge2ai/standards-datastandardortool-schema/",
@@ -33,12 +34,11 @@
"@id": "B2AI_USECASE:alternative_standards_and_tools"
},
"category": {
- "@type": "@id",
+ "@type": "xsd:anyURI",
"@id": "B2AI:category"
},
"collection": {
"@context": {
- "@vocab": "@null",
"text": "skos:notation",
"description": "skos:prefLabel",
"meaning": "@id"
@@ -60,7 +60,7 @@
"@id": "B2AI:contributor_name"
},
"contributor_orcid": {
- "@type": "@id",
+ "@type": "xsd:anyURI",
"@id": "B2AI:contributor_orcid"
},
"data_standardortools_collection": {
@@ -87,7 +87,7 @@
"@id": "schema:description"
},
"edam_id": {
- "@type": "@id",
+ "@type": "xsd:anyURI",
"@id": "B2AI:edam_id"
},
"enables": {
@@ -98,13 +98,17 @@
"@id": "B2AI_SUBSTRATE:file_extensions"
},
"formal_specification": {
- "@type": "@id",
+ "@type": "xsd:anyURI",
"@id": "B2AI_STANDARD:formal_specification"
},
"has_relevant_organization": {
"@type": "@id",
"@id": "B2AI_STANDARD:has_relevant_organization"
},
+ "has_training_resource": {
+ "@type": "@id",
+ "@id": "B2AI_STANDARD:has_training_resource"
+ },
"id": "@id",
"involved_in_experimental_design": {
"@type": "xsd:boolean",
@@ -129,17 +133,18 @@
"@id": "B2AI_SUBSTRATE:limitations"
},
"mesh_id": {
- "@type": "@id",
+ "@type": "xsd:anyURI",
"@id": "B2AI:mesh_id"
},
"metadata_storage": {
+ "@type": "@id",
"@id": "B2AI_SUBSTRATE:metadata_storage"
},
"name": {
"@id": "schema:name"
},
"ncit_id": {
- "@type": "@id",
+ "@type": "xsd:anyURI",
"@id": "B2AI:ncit_id"
},
"node_property": {
@@ -154,7 +159,7 @@
"@id": "B2AI_ORG:organizations"
},
"publication": {
- "@type": "@id",
+ "@type": "xsd:anyURI",
"@id": "B2AI_STANDARD:publication"
},
"purpose_detail": {
@@ -166,7 +171,6 @@
},
"relevance_to_dgps": {
"@context": {
- "@vocab": "@null",
"text": "skos:notation",
"description": "skos:prefLabel",
"meaning": "@id"
@@ -178,7 +182,7 @@
"@id": "B2AI_STANDARD:requires_registration"
},
"ror_id": {
- "@type": "@id",
+ "@type": "xsd:anyURI",
"@id": "B2AI_ORG:ror_id"
},
"standards_and_tools_for_dgp_use": {
@@ -197,12 +201,11 @@
"@id": "B2AI:type"
},
"url": {
- "@type": "@id",
+ "@type": "xsd:anyURI",
"@id": "B2AI:url"
},
"use_case_category": {
"@context": {
- "@vocab": "@null",
"text": "skos:notation",
"description": "skos:prefLabel",
"meaning": "@id"
@@ -214,15 +217,15 @@
"@id": "B2AI_USECASE:use_cases"
},
"use_conditions": {
- "@type": "@id",
+ "@type": "xsd:anyURI",
"@id": "B2AI_STANDARD:use_conditions"
},
"wikidata_id": {
- "@type": "@id",
+ "@type": "xsd:anyURI",
"@id": "B2AI_ORG:wikidata_id"
},
"xref": {
- "@type": "@id",
+ "@type": "xsd:anyURI",
"@id": "B2AI:xref"
},
"AnatomicalEntity": {
diff --git a/project/jsonld/standards_schema_all.jsonld b/project/jsonld/standards_schema_all.jsonld
index faf0a81..aa7b2e9 100644
--- a/project/jsonld/standards_schema_all.jsonld
+++ b/project/jsonld/standards_schema_all.jsonld
@@ -815,12 +815,12 @@
"is_a": "node_property",
"domain": "NamedThing",
"slot_uri": "https://w3id.org/bridge2ai/standards-schema/xref",
- "multivalued": true,
"owner": "xref",
"domain_of": [
"UseCase"
],
"range": "uriorcurie",
+ "multivalued": true,
"@type": "SlotDefinition"
},
{
@@ -902,7 +902,6 @@
"from_schema": "https://w3id.org/bridge2ai/standards-schema",
"domain": "NamedThing",
"slot_uri": "https://w3id.org/bridge2ai/standards-schema/related_to",
- "multivalued": true,
"inherited": true,
"owner": "Organization",
"domain_of": [
@@ -911,6 +910,7 @@
],
"symmetric": true,
"range": "NamedThing",
+ "multivalued": true,
"@type": "SlotDefinition"
},
{
@@ -928,13 +928,13 @@
"is_a": "related_to",
"domain": "NamedThing",
"slot_uri": "https://w3id.org/bridge2ai/standards-schema/subclass_of",
- "multivalued": true,
"inherited": true,
"owner": "NamedThing",
"domain_of": [
"NamedThing"
],
"range": "NamedThing",
+ "multivalued": true,
"@type": "SlotDefinition"
},
{
@@ -945,12 +945,12 @@
"is_a": "node_property",
"domain": "NamedThing",
"slot_uri": "https://w3id.org/bridge2ai/standards-datastandardortool-schema/collection",
- "multivalued": true,
"owner": "DataStandardOrTool",
"domain_of": [
"DataStandardOrTool"
],
"range": "StandardsCollectionTag",
+ "multivalued": true,
"@type": "SlotDefinition"
},
{
@@ -994,15 +994,15 @@
],
"domain": "NamedThing",
"slot_uri": "https://w3id.org/bridge2ai/standards-datastandardortool-schema/use_conditions",
- "multivalued": true,
"owner": "use_conditions",
"range": "uriorcurie",
+ "multivalued": true,
"@type": "SlotDefinition"
},
{
"name": "requires_registration",
"definition_uri": "https://w3id.org/bridge2ai/standards-datastandardortool-schema/requires_registration",
- "description": "Does usage of the standard or tool require registrion of a user or group with some organization or managerial body?",
+ "description": "Does usage of the standard or tool require registration of a user or group with some organization or managerial body?",
"from_schema": "https://w3id.org/bridge2ai/standards-datastandardortool-schema",
"is_a": "node_property",
"domain": "NamedThing",
@@ -1022,13 +1022,13 @@
"is_a": "related_to",
"domain": "DataStandardOrTool",
"slot_uri": "https://w3id.org/bridge2ai/standards-datastandardortool-schema/concerns_data_topic",
- "multivalued": true,
"inherited": true,
"owner": "DataStandardOrTool",
"domain_of": [
"DataStandardOrTool"
],
"range": "DataTopic",
+ "multivalued": true,
"@type": "SlotDefinition"
},
{
@@ -1069,13 +1069,29 @@
"is_a": "related_to",
"domain": "DataStandardOrTool",
"slot_uri": "https://w3id.org/bridge2ai/standards-datastandardortool-schema/has_relevant_organization",
- "multivalued": true,
"inherited": true,
"owner": "DataStandardOrTool",
"domain_of": [
"DataStandardOrTool"
],
"range": "Organization",
+ "multivalued": true,
+ "@type": "SlotDefinition"
+ },
+ {
+ "name": "has_training_resource",
+ "definition_uri": "https://w3id.org/bridge2ai/standards-datastandardortool-schema/has_training_resource",
+ "description": "Relevant training resources, standard usage manuals, or other documentation for the standard or tool.",
+ "from_schema": "https://w3id.org/bridge2ai/standards-datastandardortool-schema",
+ "is_a": "node_property",
+ "domain": "NamedThing",
+ "slot_uri": "https://w3id.org/bridge2ai/standards-datastandardortool-schema/has_training_resource",
+ "owner": "DataStandardOrTool",
+ "domain_of": [
+ "DataStandardOrTool"
+ ],
+ "range": "DataStandardOrTool",
+ "multivalued": true,
"@type": "SlotDefinition"
},
{
@@ -1084,12 +1100,12 @@
"description": "Collection of associated data standards or tools",
"from_schema": "https://w3id.org/bridge2ai/standards-datastandardortool-schema",
"slot_uri": "https://w3id.org/bridge2ai/standards-datastandardortool-schema/data_standardortools_collection",
- "multivalued": true,
"owner": "DataStandardOrToolContainer",
"domain_of": [
"DataStandardOrToolContainer"
],
"range": "DataStandardOrTool",
+ "multivalued": true,
"inlined": true,
"inlined_as_list": true,
"@type": "SlotDefinition"
@@ -1117,12 +1133,12 @@
"is_a": "node_property",
"domain": "NamedThing",
"slot_uri": "https://w3id.org/bridge2ai/standards-datasubstrate-schema/metadata_storage",
- "multivalued": true,
"owner": "DataSubstrate",
"domain_of": [
"DataSubstrate"
],
"range": "string",
+ "multivalued": true,
"any_of": [
{
"range": "DataSubstrate",
@@ -1143,12 +1159,12 @@
"is_a": "node_property",
"domain": "NamedThing",
"slot_uri": "https://w3id.org/bridge2ai/standards-datasubstrate-schema/file_extensions",
- "multivalued": true,
"owner": "DataSubstrate",
"domain_of": [
"DataSubstrate"
],
"range": "string",
+ "multivalued": true,
"@type": "SlotDefinition"
},
{
@@ -1159,12 +1175,12 @@
"is_a": "node_property",
"domain": "NamedThing",
"slot_uri": "https://w3id.org/bridge2ai/standards-datasubstrate-schema/limitations",
- "multivalued": true,
"owner": "DataSubstrate",
"domain_of": [
"DataSubstrate"
],
"range": "string",
+ "multivalued": true,
"@type": "SlotDefinition"
},
{
@@ -1173,12 +1189,12 @@
"description": "Collection of associated data substrates",
"from_schema": "https://w3id.org/bridge2ai/standards-datasubstrate-schema",
"slot_uri": "https://w3id.org/bridge2ai/standards-datasubstrate-schema/data_substrates_collection",
- "multivalued": true,
"owner": "DataSubstrateContainer",
"domain_of": [
"DataSubstrateContainer"
],
"range": "DataSubstrate",
+ "multivalued": true,
"inlined": true,
"inlined_as_list": true,
"@type": "SlotDefinition"
@@ -1189,12 +1205,12 @@
"description": "Collection of associated data topics.",
"from_schema": "https://w3id.org/bridge2ai/standards-datatopic-schema",
"slot_uri": "https://w3id.org/bridge2ai/standards-datatopic-schema/data_topics_collection",
- "multivalued": true,
"owner": "DataTopicContainer",
"domain_of": [
"DataTopicContainer"
],
"range": "DataTopic",
+ "multivalued": true,
"inlined": true,
"inlined_as_list": true,
"@type": "SlotDefinition"
@@ -1210,13 +1226,13 @@
"is_a": "related_to",
"domain": "DataTopic",
"slot_uri": "https://w3id.org/bridge2ai/standards-datatopic-schema/topic_involves_anatomy",
- "multivalued": true,
"inherited": true,
"owner": "DataTopic",
"domain_of": [
"DataTopic"
],
"range": "AnatomicalEntity",
+ "multivalued": true,
"@type": "SlotDefinition"
},
{
@@ -1269,12 +1285,12 @@
"description": "Collection of associated organizations.",
"from_schema": "https://w3id.org/bridge2ai/standards-organization-schema",
"slot_uri": "https://w3id.org/bridge2ai/standards-organization-schema/organizations",
- "multivalued": true,
"owner": "OrganizationContainer",
"domain_of": [
"OrganizationContainer"
],
"range": "Organization",
+ "multivalued": true,
"inlined": true,
"inlined_as_list": true,
"@type": "SlotDefinition"
@@ -1315,12 +1331,12 @@
"description": "Relevance of the use case to one or more DGPs.",
"from_schema": "https://w3id.org/bridge2ai/standards-usecase-schema",
"slot_uri": "https://w3id.org/bridge2ai/standards-usecase-schema/relevance_to_dgps",
- "multivalued": true,
"owner": "UseCase",
"domain_of": [
"UseCase"
],
"range": "DataGeneratingProject",
+ "multivalued": true,
"@type": "SlotDefinition"
},
{
@@ -1331,12 +1347,12 @@
"is_a": "node_property",
"domain": "NamedThing",
"slot_uri": "https://w3id.org/bridge2ai/standards-usecase-schema/data_topics",
- "multivalued": true,
"owner": "UseCase",
"domain_of": [
"UseCase"
],
"range": "DataTopic",
+ "multivalued": true,
"@type": "SlotDefinition"
},
{
@@ -1347,12 +1363,12 @@
"is_a": "node_property",
"domain": "NamedThing",
"slot_uri": "https://w3id.org/bridge2ai/standards-usecase-schema/data_substrates",
- "multivalued": true,
"owner": "UseCase",
"domain_of": [
"UseCase"
],
"range": "DataSubstrate",
+ "multivalued": true,
"@type": "SlotDefinition"
},
{
@@ -1363,12 +1379,12 @@
"is_a": "node_property",
"domain": "NamedThing",
"slot_uri": "https://w3id.org/bridge2ai/standards-usecase-schema/standards_and_tools_for_dgp_use",
- "multivalued": true,
"owner": "UseCase",
"domain_of": [
"UseCase"
],
"range": "DataStandardOrTool",
+ "multivalued": true,
"@type": "SlotDefinition"
},
{
@@ -1379,12 +1395,12 @@
"is_a": "node_property",
"domain": "NamedThing",
"slot_uri": "https://w3id.org/bridge2ai/standards-usecase-schema/alternative_standards_and_tools",
- "multivalued": true,
"owner": "UseCase",
"domain_of": [
"UseCase"
],
"range": "DataStandardOrTool",
+ "multivalued": true,
"@type": "SlotDefinition"
},
{
@@ -1395,12 +1411,12 @@
"is_a": "node_property",
"domain": "NamedThing",
"slot_uri": "https://w3id.org/bridge2ai/standards-usecase-schema/enables",
- "multivalued": true,
"owner": "UseCase",
"domain_of": [
"UseCase"
],
"range": "UseCase",
+ "multivalued": true,
"@type": "SlotDefinition"
},
{
@@ -1454,12 +1470,12 @@
"description": "Collection of associated use cases",
"from_schema": "https://w3id.org/bridge2ai/standards-usecase-schema",
"slot_uri": "https://w3id.org/bridge2ai/standards-usecase-schema/use_cases",
- "multivalued": true,
"owner": "UseCaseContainer",
"domain_of": [
"UseCaseContainer"
],
"range": "UseCase",
+ "multivalued": true,
"inlined": true,
"inlined_as_list": true,
"@type": "SlotDefinition"
@@ -1561,6 +1577,7 @@
"collection",
"concerns_data_topic",
"has_relevant_organization",
+ "has_training_resource",
"purpose_detail",
"is_open",
"requires_registration",
@@ -1593,6 +1610,7 @@
"collection",
"concerns_data_topic",
"has_relevant_organization",
+ "has_training_resource",
"purpose_detail",
"is_open",
"requires_registration",
@@ -1625,6 +1643,7 @@
"collection",
"concerns_data_topic",
"has_relevant_organization",
+ "has_training_resource",
"purpose_detail",
"is_open",
"requires_registration",
@@ -1657,6 +1676,7 @@
"collection",
"concerns_data_topic",
"has_relevant_organization",
+ "has_training_resource",
"purpose_detail",
"is_open",
"requires_registration",
@@ -1689,6 +1709,7 @@
"collection",
"concerns_data_topic",
"has_relevant_organization",
+ "has_training_resource",
"purpose_detail",
"is_open",
"requires_registration",
@@ -1704,7 +1725,7 @@
{
"name": "ModelRepository",
"definition_uri": "https://w3id.org/bridge2ai/standards-datastandardortool-schema/ModelRepository",
- "description": "Represents a resource in the Bridge2AI Standards Registry serving to curate and store computational models. To be a respository, the resource must not index models alone.",
+ "description": "Represents a resource in the Bridge2AI Standards Registry serving to curate and store computational models. To be a repository, the resource must not index models alone.",
"from_schema": "https://w3id.org/bridge2ai/standards-datastandardortool-schema",
"is_a": "DataStandardOrTool",
"slots": [
@@ -1721,6 +1742,7 @@
"collection",
"concerns_data_topic",
"has_relevant_organization",
+ "has_training_resource",
"purpose_detail",
"is_open",
"requires_registration",
@@ -1753,6 +1775,7 @@
"collection",
"concerns_data_topic",
"has_relevant_organization",
+ "has_training_resource",
"purpose_detail",
"is_open",
"requires_registration",
@@ -1785,6 +1808,7 @@
"collection",
"concerns_data_topic",
"has_relevant_organization",
+ "has_training_resource",
"purpose_detail",
"is_open",
"requires_registration",
@@ -1817,6 +1841,7 @@
"collection",
"concerns_data_topic",
"has_relevant_organization",
+ "has_training_resource",
"purpose_detail",
"is_open",
"requires_registration",
@@ -1849,6 +1874,7 @@
"collection",
"concerns_data_topic",
"has_relevant_organization",
+ "has_training_resource",
"purpose_detail",
"is_open",
"requires_registration",
@@ -2037,9 +2063,9 @@
],
"metamodel_version": "1.7.0",
"source_file": "standards_schema_all.yaml",
- "source_file_date": "2023-03-27T14:02:39",
+ "source_file_date": "2024-11-18T16:26:57",
"source_file_size": 439,
- "generation_date": "2024-11-04T17:40:38",
+ "generation_date": "2024-11-18T17:25:30",
"@type": "SchemaDefinition",
"@context": [
"project/jsonld/standards_schema_all.context.jsonld",
diff --git a/project/jsonschema/standards_schema_all.schema.json b/project/jsonschema/standards_schema_all.schema.json
index 0b40dd5..6a4a5db 100644
--- a/project/jsonschema/standards_schema_all.schema.json
+++ b/project/jsonschema/standards_schema_all.schema.json
@@ -6,28 +6,49 @@
"properties": {
"category": {
"description": "Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\".",
- "type": "string"
+ "enum": [
+ "B2AI:AnatomicalEntity"
+ ],
+ "type": [
+ "string",
+ "null"
+ ]
},
"contribution_date": {
"description": "The date on which the node was added.",
"format": "date",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"contributor_github_name": {
"description": "The name of the github user who added this node.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"contributor_name": {
"description": "The name of the person who added this node.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"contributor_orcid": {
"description": "The ORCiD of the person who added this node.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"description": {
"description": "A human-readable description for a thing.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"id": {
"description": "A unique identifier for a thing.",
@@ -35,21 +56,30 @@
},
"name": {
"description": "A human-readable name for a thing.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"related_to": {
"description": "A relationship that is asserted between two named things.",
"items": {
"type": "string"
},
- "type": "array"
+ "type": [
+ "array",
+ "null"
+ ]
},
"subclass_of": {
"description": "Holds between two classes where the domain class is a specialization of the range class.",
"items": {
"type": "string"
},
- "type": "array"
+ "type": [
+ "array",
+ "null"
+ ]
}
},
"required": [
@@ -64,53 +94,96 @@
"properties": {
"category": {
"description": "Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\".",
- "type": "string"
+ "enum": [
+ "B2AI_STANDARD:BiomedicalStandard"
+ ],
+ "type": [
+ "string",
+ "null"
+ ]
},
"collection": {
"description": "Tags for specific sets of standards.",
"items": {
"$ref": "#/$defs/StandardsCollectionTag"
},
- "type": "array"
+ "type": [
+ "array",
+ "null"
+ ]
},
"concerns_data_topic": {
"description": "Subject standard is generally applied in the context of object data topic.",
"items": {
"type": "string"
},
- "type": "array"
+ "type": [
+ "array",
+ "null"
+ ]
},
"contribution_date": {
"description": "The date on which the node was added.",
"format": "date",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"contributor_github_name": {
"description": "The name of the github user who added this node.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"contributor_name": {
"description": "The name of the person who added this node.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"contributor_orcid": {
"description": "The ORCiD of the person who added this node.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"description": {
"description": "A human-readable description for a thing.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"formal_specification": {
"description": "Relevant code repository or other location for a formal specification of the standard or tool. Often a URL, particularly to a Git repository.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"has_relevant_organization": {
"description": "Subject standard is managed or otherwise guided buy the object organization(s).",
"items": {
"type": "string"
},
- "type": "array"
+ "type": [
+ "array",
+ "null"
+ ]
+ },
+ "has_training_resource": {
+ "description": "Relevant training resources, standard usage manuals, or other documentation for the standard or tool.",
+ "items": {
+ "type": "string"
+ },
+ "type": [
+ "array",
+ "null"
+ ]
},
"id": {
"description": "A unique identifier for a thing.",
@@ -118,45 +191,72 @@
},
"is_open": {
"description": "Is the standard or tool FAIR and available free of cost?",
- "type": "boolean"
+ "type": [
+ "boolean",
+ "null"
+ ]
},
"name": {
"description": "A human-readable name for a thing.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"not_relevant_to_dgps": {
"description": "Is the standard or tool currently relevant to DGPs?",
- "type": "boolean"
+ "type": [
+ "boolean",
+ "null"
+ ]
},
"publication": {
"description": "Relevant publication for the standard or tool. Prefer a DOI or PUBMED.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"purpose_detail": {
"description": "Text description of the standard or tool.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"related_to": {
"description": "A relationship that is asserted between two named things.",
"items": {
"type": "string"
},
- "type": "array"
+ "type": [
+ "array",
+ "null"
+ ]
},
"requires_registration": {
- "description": "Does usage of the standard or tool require registrion of a user or group with some organization or managerial body?",
- "type": "boolean"
+ "description": "Does usage of the standard or tool require registration of a user or group with some organization or managerial body?",
+ "type": [
+ "boolean",
+ "null"
+ ]
},
"subclass_of": {
"description": "Holds between two classes where the domain class is a specialization of the range class.",
"items": {
"type": "string"
},
- "type": "array"
+ "type": [
+ "array",
+ "null"
+ ]
},
"url": {
"description": "URL for basic documentation of the standard or tool.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
}
},
"required": [
@@ -182,53 +282,96 @@
"properties": {
"category": {
"description": "Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\".",
- "type": "string"
+ "enum": [
+ "B2AI_STANDARD:DataStandard"
+ ],
+ "type": [
+ "string",
+ "null"
+ ]
},
"collection": {
"description": "Tags for specific sets of standards.",
"items": {
"$ref": "#/$defs/StandardsCollectionTag"
},
- "type": "array"
+ "type": [
+ "array",
+ "null"
+ ]
},
"concerns_data_topic": {
"description": "Subject standard is generally applied in the context of object data topic.",
"items": {
"type": "string"
},
- "type": "array"
+ "type": [
+ "array",
+ "null"
+ ]
},
"contribution_date": {
"description": "The date on which the node was added.",
"format": "date",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"contributor_github_name": {
"description": "The name of the github user who added this node.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"contributor_name": {
"description": "The name of the person who added this node.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"contributor_orcid": {
"description": "The ORCiD of the person who added this node.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"description": {
"description": "A human-readable description for a thing.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"formal_specification": {
"description": "Relevant code repository or other location for a formal specification of the standard or tool. Often a URL, particularly to a Git repository.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"has_relevant_organization": {
"description": "Subject standard is managed or otherwise guided buy the object organization(s).",
"items": {
"type": "string"
},
- "type": "array"
+ "type": [
+ "array",
+ "null"
+ ]
+ },
+ "has_training_resource": {
+ "description": "Relevant training resources, standard usage manuals, or other documentation for the standard or tool.",
+ "items": {
+ "type": "string"
+ },
+ "type": [
+ "array",
+ "null"
+ ]
},
"id": {
"description": "A unique identifier for a thing.",
@@ -236,45 +379,72 @@
},
"is_open": {
"description": "Is the standard or tool FAIR and available free of cost?",
- "type": "boolean"
+ "type": [
+ "boolean",
+ "null"
+ ]
},
"name": {
"description": "A human-readable name for a thing.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"not_relevant_to_dgps": {
"description": "Is the standard or tool currently relevant to DGPs?",
- "type": "boolean"
+ "type": [
+ "boolean",
+ "null"
+ ]
},
"publication": {
"description": "Relevant publication for the standard or tool. Prefer a DOI or PUBMED.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"purpose_detail": {
"description": "Text description of the standard or tool.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"related_to": {
"description": "A relationship that is asserted between two named things.",
"items": {
"type": "string"
},
- "type": "array"
+ "type": [
+ "array",
+ "null"
+ ]
},
"requires_registration": {
- "description": "Does usage of the standard or tool require registrion of a user or group with some organization or managerial body?",
- "type": "boolean"
+ "description": "Does usage of the standard or tool require registration of a user or group with some organization or managerial body?",
+ "type": [
+ "boolean",
+ "null"
+ ]
},
"subclass_of": {
"description": "Holds between two classes where the domain class is a specialization of the range class.",
"items": {
"type": "string"
},
- "type": "array"
+ "type": [
+ "array",
+ "null"
+ ]
},
"url": {
"description": "URL for basic documentation of the standard or tool.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
}
},
"required": [
@@ -289,53 +459,96 @@
"properties": {
"category": {
"description": "Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\".",
- "type": "string"
+ "enum": [
+ "B2AI_STANDARD:DataStandardOrTool"
+ ],
+ "type": [
+ "string",
+ "null"
+ ]
},
"collection": {
"description": "Tags for specific sets of standards.",
"items": {
"$ref": "#/$defs/StandardsCollectionTag"
},
- "type": "array"
+ "type": [
+ "array",
+ "null"
+ ]
},
"concerns_data_topic": {
"description": "Subject standard is generally applied in the context of object data topic.",
"items": {
"type": "string"
},
- "type": "array"
+ "type": [
+ "array",
+ "null"
+ ]
},
"contribution_date": {
"description": "The date on which the node was added.",
"format": "date",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"contributor_github_name": {
"description": "The name of the github user who added this node.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"contributor_name": {
"description": "The name of the person who added this node.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"contributor_orcid": {
"description": "The ORCiD of the person who added this node.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"description": {
"description": "A human-readable description for a thing.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"formal_specification": {
"description": "Relevant code repository or other location for a formal specification of the standard or tool. Often a URL, particularly to a Git repository.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"has_relevant_organization": {
"description": "Subject standard is managed or otherwise guided buy the object organization(s).",
"items": {
"type": "string"
},
- "type": "array"
+ "type": [
+ "array",
+ "null"
+ ]
+ },
+ "has_training_resource": {
+ "description": "Relevant training resources, standard usage manuals, or other documentation for the standard or tool.",
+ "items": {
+ "type": "string"
+ },
+ "type": [
+ "array",
+ "null"
+ ]
},
"id": {
"description": "A unique identifier for a thing.",
@@ -343,45 +556,72 @@
},
"is_open": {
"description": "Is the standard or tool FAIR and available free of cost?",
- "type": "boolean"
+ "type": [
+ "boolean",
+ "null"
+ ]
},
"name": {
"description": "A human-readable name for a thing.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"not_relevant_to_dgps": {
"description": "Is the standard or tool currently relevant to DGPs?",
- "type": "boolean"
+ "type": [
+ "boolean",
+ "null"
+ ]
},
"publication": {
"description": "Relevant publication for the standard or tool. Prefer a DOI or PUBMED.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"purpose_detail": {
"description": "Text description of the standard or tool.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"related_to": {
"description": "A relationship that is asserted between two named things.",
"items": {
"type": "string"
},
- "type": "array"
+ "type": [
+ "array",
+ "null"
+ ]
},
"requires_registration": {
- "description": "Does usage of the standard or tool require registrion of a user or group with some organization or managerial body?",
- "type": "boolean"
+ "description": "Does usage of the standard or tool require registration of a user or group with some organization or managerial body?",
+ "type": [
+ "boolean",
+ "null"
+ ]
},
"subclass_of": {
"description": "Holds between two classes where the domain class is a specialization of the range class.",
"items": {
"type": "string"
},
- "type": "array"
+ "type": [
+ "array",
+ "null"
+ ]
},
"url": {
"description": "URL for basic documentation of the standard or tool.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
}
},
"required": [
@@ -397,9 +637,43 @@
"data_standardortools_collection": {
"description": "Collection of associated data standards or tools",
"items": {
- "$ref": "#/$defs/DataStandardOrTool"
- },
- "type": "array"
+ "anyOf": [
+ {
+ "$ref": "#/$defs/DataStandardOrTool"
+ },
+ {
+ "$ref": "#/$defs/DataStandard"
+ },
+ {
+ "$ref": "#/$defs/Registry"
+ },
+ {
+ "$ref": "#/$defs/OntologyOrVocabulary"
+ },
+ {
+ "$ref": "#/$defs/ModelRepository"
+ },
+ {
+ "$ref": "#/$defs/ReferenceDataOrDataset"
+ },
+ {
+ "$ref": "#/$defs/SoftwareOrTool"
+ },
+ {
+ "$ref": "#/$defs/ReferenceImplementation"
+ },
+ {
+ "$ref": "#/$defs/TrainingProgram"
+ },
+ {
+ "$ref": "#/$defs/BiomedicalStandard"
+ }
+ ]
+ },
+ "type": [
+ "array",
+ "null"
+ ]
}
},
"title": "DataStandardOrToolContainer",
@@ -411,39 +685,66 @@
"properties": {
"category": {
"description": "Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\".",
- "type": "string"
+ "enum": [
+ "B2AI_SUBSTRATE:DataSubstrate"
+ ],
+ "type": [
+ "string",
+ "null"
+ ]
},
"contribution_date": {
"description": "The date on which the node was added.",
"format": "date",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"contributor_github_name": {
"description": "The name of the github user who added this node.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"contributor_name": {
"description": "The name of the person who added this node.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"contributor_orcid": {
"description": "The ORCiD of the person who added this node.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"description": {
"description": "A human-readable description for a thing.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"edam_id": {
"description": "Unique EDAM identifier",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"file_extensions": {
"description": "Commonly used file extensions for this substrate.",
"items": {
"type": "string"
},
- "type": "array"
+ "type": [
+ "array",
+ "null"
+ ]
},
"id": {
"description": "A unique identifier for a thing.",
@@ -454,46 +755,69 @@
"items": {
"type": "string"
},
- "type": "array"
+ "type": [
+ "array",
+ "null"
+ ]
},
"mesh_id": {
"description": "Unique MeSH identifier",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"metadata_storage": {
- "anyOf": [
- {},
- {
- "const": "file headers"
- }
- ],
"description": "Data Substrate in which metadata is stored.",
"items": {
+ "anyOf": [
+ {
+ "type": "string"
+ },
+ {
+ "const": "file headers"
+ }
+ ],
"type": "string"
},
- "type": "array"
+ "type": [
+ "array",
+ "null"
+ ]
},
"name": {
"description": "A human-readable name for a thing.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"ncit_id": {
"description": "Unique NCIt Identifier",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"related_to": {
"description": "A relationship that is asserted between two named things.",
"items": {
"type": "string"
},
- "type": "array"
+ "type": [
+ "array",
+ "null"
+ ]
},
"subclass_of": {
"description": "Holds between two classes where the domain class is a specialization of the range class.",
"items": {
"type": "string"
},
- "type": "array"
+ "type": [
+ "array",
+ "null"
+ ]
}
},
"required": [
@@ -511,7 +835,10 @@
"items": {
"$ref": "#/$defs/DataSubstrate"
},
- "type": "array"
+ "type": [
+ "array",
+ "null"
+ ]
}
},
"title": "DataSubstrateContainer",
@@ -523,32 +850,56 @@
"properties": {
"category": {
"description": "Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\".",
- "type": "string"
+ "enum": [
+ "B2AI_TOPIC:DataTopic"
+ ],
+ "type": [
+ "string",
+ "null"
+ ]
},
"contribution_date": {
"description": "The date on which the node was added.",
"format": "date",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"contributor_github_name": {
"description": "The name of the github user who added this node.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"contributor_name": {
"description": "The name of the person who added this node.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"contributor_orcid": {
"description": "The ORCiD of the person who added this node.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"description": {
"description": "A human-readable description for a thing.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"edam_id": {
"description": "Unique EDAM identifier",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"id": {
"description": "A unique identifier for a thing.",
@@ -556,36 +907,54 @@
},
"mesh_id": {
"description": "Unique MeSH identifier",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"name": {
"description": "A human-readable name for a thing.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"ncit_id": {
"description": "Unique NCIt Identifier",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"related_to": {
"description": "A relationship that is asserted between two named things.",
"items": {
"type": "string"
},
- "type": "array"
+ "type": [
+ "array",
+ "null"
+ ]
},
"subclass_of": {
"description": "Holds between two classes where the domain class is a specialization of the range class.",
"items": {
"type": "string"
},
- "type": "array"
+ "type": [
+ "array",
+ "null"
+ ]
},
"topic_involves_anatomy": {
"description": "A relationship between a DataTopic and an anatomical entity.",
"items": {
"type": "string"
},
- "type": "array"
+ "type": [
+ "array",
+ "null"
+ ]
}
},
"required": [
@@ -603,7 +972,10 @@
"items": {
"$ref": "#/$defs/DataTopic"
},
- "type": "array"
+ "type": [
+ "array",
+ "null"
+ ]
}
},
"title": "DataTopicContainer",
@@ -611,57 +983,100 @@
},
"ModelRepository": {
"additionalProperties": false,
- "description": "Represents a resource in the Bridge2AI Standards Registry serving to curate and store computational models. To be a respository, the resource must not index models alone.",
+ "description": "Represents a resource in the Bridge2AI Standards Registry serving to curate and store computational models. To be a repository, the resource must not index models alone.",
"properties": {
"category": {
"description": "Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\".",
- "type": "string"
+ "enum": [
+ "B2AI_STANDARD:ModelRepository"
+ ],
+ "type": [
+ "string",
+ "null"
+ ]
},
"collection": {
"description": "Tags for specific sets of standards.",
"items": {
"$ref": "#/$defs/StandardsCollectionTag"
},
- "type": "array"
+ "type": [
+ "array",
+ "null"
+ ]
},
"concerns_data_topic": {
"description": "Subject standard is generally applied in the context of object data topic.",
"items": {
"type": "string"
},
- "type": "array"
+ "type": [
+ "array",
+ "null"
+ ]
},
"contribution_date": {
"description": "The date on which the node was added.",
"format": "date",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"contributor_github_name": {
"description": "The name of the github user who added this node.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"contributor_name": {
"description": "The name of the person who added this node.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"contributor_orcid": {
"description": "The ORCiD of the person who added this node.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"description": {
"description": "A human-readable description for a thing.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"formal_specification": {
"description": "Relevant code repository or other location for a formal specification of the standard or tool. Often a URL, particularly to a Git repository.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"has_relevant_organization": {
"description": "Subject standard is managed or otherwise guided buy the object organization(s).",
"items": {
"type": "string"
},
- "type": "array"
+ "type": [
+ "array",
+ "null"
+ ]
+ },
+ "has_training_resource": {
+ "description": "Relevant training resources, standard usage manuals, or other documentation for the standard or tool.",
+ "items": {
+ "type": "string"
+ },
+ "type": [
+ "array",
+ "null"
+ ]
},
"id": {
"description": "A unique identifier for a thing.",
@@ -669,45 +1084,72 @@
},
"is_open": {
"description": "Is the standard or tool FAIR and available free of cost?",
- "type": "boolean"
+ "type": [
+ "boolean",
+ "null"
+ ]
},
"name": {
"description": "A human-readable name for a thing.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"not_relevant_to_dgps": {
"description": "Is the standard or tool currently relevant to DGPs?",
- "type": "boolean"
+ "type": [
+ "boolean",
+ "null"
+ ]
},
"publication": {
"description": "Relevant publication for the standard or tool. Prefer a DOI or PUBMED.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"purpose_detail": {
"description": "Text description of the standard or tool.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"related_to": {
"description": "A relationship that is asserted between two named things.",
"items": {
"type": "string"
},
- "type": "array"
+ "type": [
+ "array",
+ "null"
+ ]
},
"requires_registration": {
- "description": "Does usage of the standard or tool require registrion of a user or group with some organization or managerial body?",
- "type": "boolean"
+ "description": "Does usage of the standard or tool require registration of a user or group with some organization or managerial body?",
+ "type": [
+ "boolean",
+ "null"
+ ]
},
"subclass_of": {
"description": "Holds between two classes where the domain class is a specialization of the range class.",
"items": {
"type": "string"
},
- "type": "array"
+ "type": [
+ "array",
+ "null"
+ ]
},
"url": {
"description": "URL for basic documentation of the standard or tool.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
}
},
"required": [
@@ -722,28 +1164,49 @@
"properties": {
"category": {
"description": "Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\".",
- "type": "string"
+ "enum": [
+ "schema:Thing"
+ ],
+ "type": [
+ "string",
+ "null"
+ ]
},
"contribution_date": {
"description": "The date on which the node was added.",
"format": "date",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"contributor_github_name": {
"description": "The name of the github user who added this node.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"contributor_name": {
"description": "The name of the person who added this node.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"contributor_orcid": {
"description": "The ORCiD of the person who added this node.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"description": {
"description": "A human-readable description for a thing.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"id": {
"description": "A unique identifier for a thing.",
@@ -751,21 +1214,30 @@
},
"name": {
"description": "A human-readable name for a thing.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"related_to": {
"description": "A relationship that is asserted between two named things.",
"items": {
"type": "string"
},
- "type": "array"
+ "type": [
+ "array",
+ "null"
+ ]
},
"subclass_of": {
"description": "Holds between two classes where the domain class is a specialization of the range class.",
"items": {
"type": "string"
},
- "type": "array"
+ "type": [
+ "array",
+ "null"
+ ]
}
},
"required": [
@@ -780,53 +1252,96 @@
"properties": {
"category": {
"description": "Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\".",
- "type": "string"
+ "enum": [
+ "B2AI_STANDARD:OntologyOrVocabulary"
+ ],
+ "type": [
+ "string",
+ "null"
+ ]
},
"collection": {
"description": "Tags for specific sets of standards.",
"items": {
"$ref": "#/$defs/StandardsCollectionTag"
},
- "type": "array"
+ "type": [
+ "array",
+ "null"
+ ]
},
"concerns_data_topic": {
"description": "Subject standard is generally applied in the context of object data topic.",
"items": {
"type": "string"
},
- "type": "array"
+ "type": [
+ "array",
+ "null"
+ ]
},
"contribution_date": {
"description": "The date on which the node was added.",
"format": "date",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"contributor_github_name": {
"description": "The name of the github user who added this node.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"contributor_name": {
"description": "The name of the person who added this node.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"contributor_orcid": {
"description": "The ORCiD of the person who added this node.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"description": {
"description": "A human-readable description for a thing.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"formal_specification": {
"description": "Relevant code repository or other location for a formal specification of the standard or tool. Often a URL, particularly to a Git repository.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"has_relevant_organization": {
"description": "Subject standard is managed or otherwise guided buy the object organization(s).",
"items": {
"type": "string"
},
- "type": "array"
+ "type": [
+ "array",
+ "null"
+ ]
+ },
+ "has_training_resource": {
+ "description": "Relevant training resources, standard usage manuals, or other documentation for the standard or tool.",
+ "items": {
+ "type": "string"
+ },
+ "type": [
+ "array",
+ "null"
+ ]
},
"id": {
"description": "A unique identifier for a thing.",
@@ -834,45 +1349,72 @@
},
"is_open": {
"description": "Is the standard or tool FAIR and available free of cost?",
- "type": "boolean"
+ "type": [
+ "boolean",
+ "null"
+ ]
},
"name": {
"description": "A human-readable name for a thing.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"not_relevant_to_dgps": {
"description": "Is the standard or tool currently relevant to DGPs?",
- "type": "boolean"
+ "type": [
+ "boolean",
+ "null"
+ ]
},
"publication": {
"description": "Relevant publication for the standard or tool. Prefer a DOI or PUBMED.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"purpose_detail": {
"description": "Text description of the standard or tool.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"related_to": {
"description": "A relationship that is asserted between two named things.",
"items": {
"type": "string"
},
- "type": "array"
+ "type": [
+ "array",
+ "null"
+ ]
},
"requires_registration": {
- "description": "Does usage of the standard or tool require registrion of a user or group with some organization or managerial body?",
- "type": "boolean"
+ "description": "Does usage of the standard or tool require registration of a user or group with some organization or managerial body?",
+ "type": [
+ "boolean",
+ "null"
+ ]
},
"subclass_of": {
"description": "Holds between two classes where the domain class is a specialization of the range class.",
"items": {
"type": "string"
},
- "type": "array"
+ "type": [
+ "array",
+ "null"
+ ]
},
"url": {
"description": "URL for basic documentation of the standard or tool.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
}
},
"required": [
@@ -887,28 +1429,49 @@
"properties": {
"category": {
"description": "Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\".",
- "type": "string"
+ "enum": [
+ "B2AI_ORG:Organization"
+ ],
+ "type": [
+ "string",
+ "null"
+ ]
},
"contribution_date": {
"description": "The date on which the node was added.",
"format": "date",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"contributor_github_name": {
"description": "The name of the github user who added this node.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"contributor_name": {
"description": "The name of the person who added this node.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"contributor_orcid": {
"description": "The ORCiD of the person who added this node.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"description": {
"description": "A human-readable description for a thing.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"id": {
"description": "A unique identifier for a thing.",
@@ -916,33 +1479,51 @@
},
"name": {
"description": "A human-readable name for a thing.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"related_to": {
"description": "A relationship that is asserted between two named things.",
"items": {
"type": "string"
},
- "type": "array"
+ "type": [
+ "array",
+ "null"
+ ]
},
"ror_id": {
"description": "Unique ROR identifier.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"subclass_of": {
"description": "Holds between two classes where the domain class is a specialization of the range class.",
"items": {
"type": "string"
},
- "type": "array"
+ "type": [
+ "array",
+ "null"
+ ]
},
"url": {
"description": "URL for basic documentation of the standard or tool.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"wikidata_id": {
"description": "Unique Wikidata identifier.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
}
},
"required": [
@@ -960,7 +1541,10 @@
"items": {
"$ref": "#/$defs/Organization"
},
- "type": "array"
+ "type": [
+ "array",
+ "null"
+ ]
}
},
"title": "OrganizationContainer",
@@ -972,53 +1556,96 @@
"properties": {
"category": {
"description": "Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\".",
- "type": "string"
+ "enum": [
+ "B2AI_STANDARD:ReferenceDataOrDataset"
+ ],
+ "type": [
+ "string",
+ "null"
+ ]
},
"collection": {
"description": "Tags for specific sets of standards.",
"items": {
"$ref": "#/$defs/StandardsCollectionTag"
},
- "type": "array"
+ "type": [
+ "array",
+ "null"
+ ]
},
"concerns_data_topic": {
"description": "Subject standard is generally applied in the context of object data topic.",
"items": {
"type": "string"
},
- "type": "array"
+ "type": [
+ "array",
+ "null"
+ ]
},
"contribution_date": {
"description": "The date on which the node was added.",
"format": "date",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"contributor_github_name": {
"description": "The name of the github user who added this node.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"contributor_name": {
"description": "The name of the person who added this node.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"contributor_orcid": {
"description": "The ORCiD of the person who added this node.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"description": {
"description": "A human-readable description for a thing.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"formal_specification": {
"description": "Relevant code repository or other location for a formal specification of the standard or tool. Often a URL, particularly to a Git repository.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"has_relevant_organization": {
"description": "Subject standard is managed or otherwise guided buy the object organization(s).",
"items": {
"type": "string"
},
- "type": "array"
+ "type": [
+ "array",
+ "null"
+ ]
+ },
+ "has_training_resource": {
+ "description": "Relevant training resources, standard usage manuals, or other documentation for the standard or tool.",
+ "items": {
+ "type": "string"
+ },
+ "type": [
+ "array",
+ "null"
+ ]
},
"id": {
"description": "A unique identifier for a thing.",
@@ -1026,45 +1653,72 @@
},
"is_open": {
"description": "Is the standard or tool FAIR and available free of cost?",
- "type": "boolean"
+ "type": [
+ "boolean",
+ "null"
+ ]
},
"name": {
"description": "A human-readable name for a thing.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"not_relevant_to_dgps": {
"description": "Is the standard or tool currently relevant to DGPs?",
- "type": "boolean"
+ "type": [
+ "boolean",
+ "null"
+ ]
},
"publication": {
"description": "Relevant publication for the standard or tool. Prefer a DOI or PUBMED.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"purpose_detail": {
"description": "Text description of the standard or tool.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"related_to": {
"description": "A relationship that is asserted between two named things.",
"items": {
"type": "string"
},
- "type": "array"
+ "type": [
+ "array",
+ "null"
+ ]
},
"requires_registration": {
- "description": "Does usage of the standard or tool require registrion of a user or group with some organization or managerial body?",
- "type": "boolean"
+ "description": "Does usage of the standard or tool require registration of a user or group with some organization or managerial body?",
+ "type": [
+ "boolean",
+ "null"
+ ]
},
"subclass_of": {
"description": "Holds between two classes where the domain class is a specialization of the range class.",
"items": {
"type": "string"
},
- "type": "array"
+ "type": [
+ "array",
+ "null"
+ ]
},
"url": {
"description": "URL for basic documentation of the standard or tool.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
}
},
"required": [
@@ -1079,53 +1733,96 @@
"properties": {
"category": {
"description": "Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\".",
- "type": "string"
+ "enum": [
+ "B2AI_STANDARD:ReferenceImplementation"
+ ],
+ "type": [
+ "string",
+ "null"
+ ]
},
"collection": {
"description": "Tags for specific sets of standards.",
"items": {
"$ref": "#/$defs/StandardsCollectionTag"
},
- "type": "array"
+ "type": [
+ "array",
+ "null"
+ ]
},
"concerns_data_topic": {
"description": "Subject standard is generally applied in the context of object data topic.",
"items": {
"type": "string"
},
- "type": "array"
+ "type": [
+ "array",
+ "null"
+ ]
},
"contribution_date": {
"description": "The date on which the node was added.",
"format": "date",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"contributor_github_name": {
"description": "The name of the github user who added this node.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"contributor_name": {
"description": "The name of the person who added this node.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"contributor_orcid": {
"description": "The ORCiD of the person who added this node.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"description": {
"description": "A human-readable description for a thing.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"formal_specification": {
"description": "Relevant code repository or other location for a formal specification of the standard or tool. Often a URL, particularly to a Git repository.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"has_relevant_organization": {
"description": "Subject standard is managed or otherwise guided buy the object organization(s).",
"items": {
"type": "string"
},
- "type": "array"
+ "type": [
+ "array",
+ "null"
+ ]
+ },
+ "has_training_resource": {
+ "description": "Relevant training resources, standard usage manuals, or other documentation for the standard or tool.",
+ "items": {
+ "type": "string"
+ },
+ "type": [
+ "array",
+ "null"
+ ]
},
"id": {
"description": "A unique identifier for a thing.",
@@ -1133,45 +1830,72 @@
},
"is_open": {
"description": "Is the standard or tool FAIR and available free of cost?",
- "type": "boolean"
+ "type": [
+ "boolean",
+ "null"
+ ]
},
"name": {
"description": "A human-readable name for a thing.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"not_relevant_to_dgps": {
"description": "Is the standard or tool currently relevant to DGPs?",
- "type": "boolean"
+ "type": [
+ "boolean",
+ "null"
+ ]
},
"publication": {
"description": "Relevant publication for the standard or tool. Prefer a DOI or PUBMED.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"purpose_detail": {
"description": "Text description of the standard or tool.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"related_to": {
"description": "A relationship that is asserted between two named things.",
"items": {
"type": "string"
},
- "type": "array"
+ "type": [
+ "array",
+ "null"
+ ]
},
"requires_registration": {
- "description": "Does usage of the standard or tool require registrion of a user or group with some organization or managerial body?",
- "type": "boolean"
+ "description": "Does usage of the standard or tool require registration of a user or group with some organization or managerial body?",
+ "type": [
+ "boolean",
+ "null"
+ ]
},
"subclass_of": {
"description": "Holds between two classes where the domain class is a specialization of the range class.",
"items": {
"type": "string"
},
- "type": "array"
+ "type": [
+ "array",
+ "null"
+ ]
},
"url": {
"description": "URL for basic documentation of the standard or tool.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
}
},
"required": [
@@ -1186,53 +1910,96 @@
"properties": {
"category": {
"description": "Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\".",
- "type": "string"
+ "enum": [
+ "B2AI_STANDARD:Registry"
+ ],
+ "type": [
+ "string",
+ "null"
+ ]
},
"collection": {
"description": "Tags for specific sets of standards.",
"items": {
"$ref": "#/$defs/StandardsCollectionTag"
},
- "type": "array"
+ "type": [
+ "array",
+ "null"
+ ]
},
"concerns_data_topic": {
"description": "Subject standard is generally applied in the context of object data topic.",
"items": {
"type": "string"
},
- "type": "array"
+ "type": [
+ "array",
+ "null"
+ ]
},
"contribution_date": {
"description": "The date on which the node was added.",
"format": "date",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"contributor_github_name": {
"description": "The name of the github user who added this node.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"contributor_name": {
"description": "The name of the person who added this node.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"contributor_orcid": {
"description": "The ORCiD of the person who added this node.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"description": {
"description": "A human-readable description for a thing.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"formal_specification": {
"description": "Relevant code repository or other location for a formal specification of the standard or tool. Often a URL, particularly to a Git repository.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"has_relevant_organization": {
"description": "Subject standard is managed or otherwise guided buy the object organization(s).",
"items": {
"type": "string"
},
- "type": "array"
+ "type": [
+ "array",
+ "null"
+ ]
+ },
+ "has_training_resource": {
+ "description": "Relevant training resources, standard usage manuals, or other documentation for the standard or tool.",
+ "items": {
+ "type": "string"
+ },
+ "type": [
+ "array",
+ "null"
+ ]
},
"id": {
"description": "A unique identifier for a thing.",
@@ -1240,45 +2007,72 @@
},
"is_open": {
"description": "Is the standard or tool FAIR and available free of cost?",
- "type": "boolean"
+ "type": [
+ "boolean",
+ "null"
+ ]
},
"name": {
"description": "A human-readable name for a thing.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"not_relevant_to_dgps": {
"description": "Is the standard or tool currently relevant to DGPs?",
- "type": "boolean"
+ "type": [
+ "boolean",
+ "null"
+ ]
},
"publication": {
"description": "Relevant publication for the standard or tool. Prefer a DOI or PUBMED.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"purpose_detail": {
"description": "Text description of the standard or tool.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"related_to": {
"description": "A relationship that is asserted between two named things.",
"items": {
"type": "string"
},
- "type": "array"
+ "type": [
+ "array",
+ "null"
+ ]
},
"requires_registration": {
- "description": "Does usage of the standard or tool require registrion of a user or group with some organization or managerial body?",
- "type": "boolean"
+ "description": "Does usage of the standard or tool require registration of a user or group with some organization or managerial body?",
+ "type": [
+ "boolean",
+ "null"
+ ]
},
"subclass_of": {
"description": "Holds between two classes where the domain class is a specialization of the range class.",
"items": {
"type": "string"
},
- "type": "array"
+ "type": [
+ "array",
+ "null"
+ ]
},
"url": {
"description": "URL for basic documentation of the standard or tool.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
}
},
"required": [
@@ -1293,53 +2087,96 @@
"properties": {
"category": {
"description": "Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\".",
- "type": "string"
+ "enum": [
+ "B2AI_STANDARD:SoftwareOrTool"
+ ],
+ "type": [
+ "string",
+ "null"
+ ]
},
"collection": {
"description": "Tags for specific sets of standards.",
"items": {
"$ref": "#/$defs/StandardsCollectionTag"
},
- "type": "array"
+ "type": [
+ "array",
+ "null"
+ ]
},
"concerns_data_topic": {
"description": "Subject standard is generally applied in the context of object data topic.",
"items": {
"type": "string"
},
- "type": "array"
+ "type": [
+ "array",
+ "null"
+ ]
},
"contribution_date": {
"description": "The date on which the node was added.",
"format": "date",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"contributor_github_name": {
"description": "The name of the github user who added this node.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"contributor_name": {
"description": "The name of the person who added this node.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"contributor_orcid": {
"description": "The ORCiD of the person who added this node.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"description": {
"description": "A human-readable description for a thing.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"formal_specification": {
"description": "Relevant code repository or other location for a formal specification of the standard or tool. Often a URL, particularly to a Git repository.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"has_relevant_organization": {
"description": "Subject standard is managed or otherwise guided buy the object organization(s).",
"items": {
"type": "string"
},
- "type": "array"
+ "type": [
+ "array",
+ "null"
+ ]
+ },
+ "has_training_resource": {
+ "description": "Relevant training resources, standard usage manuals, or other documentation for the standard or tool.",
+ "items": {
+ "type": "string"
+ },
+ "type": [
+ "array",
+ "null"
+ ]
},
"id": {
"description": "A unique identifier for a thing.",
@@ -1347,45 +2184,72 @@
},
"is_open": {
"description": "Is the standard or tool FAIR and available free of cost?",
- "type": "boolean"
+ "type": [
+ "boolean",
+ "null"
+ ]
},
"name": {
"description": "A human-readable name for a thing.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"not_relevant_to_dgps": {
"description": "Is the standard or tool currently relevant to DGPs?",
- "type": "boolean"
+ "type": [
+ "boolean",
+ "null"
+ ]
},
"publication": {
"description": "Relevant publication for the standard or tool. Prefer a DOI or PUBMED.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"purpose_detail": {
"description": "Text description of the standard or tool.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"related_to": {
"description": "A relationship that is asserted between two named things.",
"items": {
"type": "string"
},
- "type": "array"
+ "type": [
+ "array",
+ "null"
+ ]
},
"requires_registration": {
- "description": "Does usage of the standard or tool require registrion of a user or group with some organization or managerial body?",
- "type": "boolean"
+ "description": "Does usage of the standard or tool require registration of a user or group with some organization or managerial body?",
+ "type": [
+ "boolean",
+ "null"
+ ]
},
"subclass_of": {
"description": "Holds between two classes where the domain class is a specialization of the range class.",
"items": {
"type": "string"
},
- "type": "array"
+ "type": [
+ "array",
+ "null"
+ ]
},
"url": {
"description": "URL for basic documentation of the standard or tool.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
}
},
"required": [
@@ -1442,53 +2306,96 @@
"properties": {
"category": {
"description": "Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\".",
- "type": "string"
+ "enum": [
+ "B2AI_STANDARD:TrainingProgram"
+ ],
+ "type": [
+ "string",
+ "null"
+ ]
},
"collection": {
"description": "Tags for specific sets of standards.",
"items": {
"$ref": "#/$defs/StandardsCollectionTag"
},
- "type": "array"
+ "type": [
+ "array",
+ "null"
+ ]
},
"concerns_data_topic": {
"description": "Subject standard is generally applied in the context of object data topic.",
"items": {
"type": "string"
},
- "type": "array"
+ "type": [
+ "array",
+ "null"
+ ]
},
"contribution_date": {
"description": "The date on which the node was added.",
"format": "date",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"contributor_github_name": {
"description": "The name of the github user who added this node.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"contributor_name": {
"description": "The name of the person who added this node.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"contributor_orcid": {
"description": "The ORCiD of the person who added this node.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"description": {
"description": "A human-readable description for a thing.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"formal_specification": {
"description": "Relevant code repository or other location for a formal specification of the standard or tool. Often a URL, particularly to a Git repository.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"has_relevant_organization": {
"description": "Subject standard is managed or otherwise guided buy the object organization(s).",
"items": {
"type": "string"
},
- "type": "array"
+ "type": [
+ "array",
+ "null"
+ ]
+ },
+ "has_training_resource": {
+ "description": "Relevant training resources, standard usage manuals, or other documentation for the standard or tool.",
+ "items": {
+ "type": "string"
+ },
+ "type": [
+ "array",
+ "null"
+ ]
},
"id": {
"description": "A unique identifier for a thing.",
@@ -1496,45 +2403,72 @@
},
"is_open": {
"description": "Is the standard or tool FAIR and available free of cost?",
- "type": "boolean"
+ "type": [
+ "boolean",
+ "null"
+ ]
},
"name": {
"description": "A human-readable name for a thing.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"not_relevant_to_dgps": {
"description": "Is the standard or tool currently relevant to DGPs?",
- "type": "boolean"
+ "type": [
+ "boolean",
+ "null"
+ ]
},
"publication": {
"description": "Relevant publication for the standard or tool. Prefer a DOI or PUBMED.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"purpose_detail": {
"description": "Text description of the standard or tool.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"related_to": {
"description": "A relationship that is asserted between two named things.",
"items": {
"type": "string"
},
- "type": "array"
+ "type": [
+ "array",
+ "null"
+ ]
},
"requires_registration": {
- "description": "Does usage of the standard or tool require registrion of a user or group with some organization or managerial body?",
- "type": "boolean"
+ "description": "Does usage of the standard or tool require registration of a user or group with some organization or managerial body?",
+ "type": [
+ "boolean",
+ "null"
+ ]
},
"subclass_of": {
"description": "Holds between two classes where the domain class is a specialization of the range class.",
"items": {
"type": "string"
},
- "type": "array"
+ "type": [
+ "array",
+ "null"
+ ]
},
"url": {
"description": "URL for basic documentation of the standard or tool.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
}
},
"required": [
@@ -1552,53 +2486,86 @@
"items": {
"type": "string"
},
- "type": "array"
+ "type": [
+ "array",
+ "null"
+ ]
},
"category": {
"description": "Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\".",
- "type": "string"
+ "enum": [
+ "B2AI_USECASE:UseCase"
+ ],
+ "type": [
+ "string",
+ "null"
+ ]
},
"contribution_date": {
"description": "The date on which the node was added.",
"format": "date",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"contributor_github_name": {
"description": "The name of the github user who added this node.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"contributor_name": {
"description": "The name of the person who added this node.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"contributor_orcid": {
"description": "The ORCiD of the person who added this node.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"data_substrates": {
"description": "Relevance of the use case to one or more data substrates.",
"items": {
"type": "string"
},
- "type": "array"
+ "type": [
+ "array",
+ "null"
+ ]
},
"data_topics": {
"description": "Relevance of the use case to one or more data topics.",
"items": {
"type": "string"
},
- "type": "array"
+ "type": [
+ "array",
+ "null"
+ ]
},
"description": {
"description": "A human-readable description for a thing.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"enables": {
"description": "Other use case(s) this use case supports or makes possible.",
"items": {
"type": "string"
},
- "type": "array"
+ "type": [
+ "array",
+ "null"
+ ]
},
"id": {
"description": "A unique identifier for a thing.",
@@ -1606,51 +2573,78 @@
},
"involved_in_experimental_design": {
"description": "True if use case is likely to be implemented as part of an experimental procedure or collection of data to be used as part of an experiment.",
- "type": "boolean"
+ "type": [
+ "boolean",
+ "null"
+ ]
},
"involved_in_metadata_management": {
"description": "True if use case is likely to be implemented as part of metadata indexing, sample tracking, or any other storage of high-level data properties. Includes use cases in which metadata will be collected along with data.",
- "type": "boolean"
+ "type": [
+ "boolean",
+ "null"
+ ]
},
"involved_in_quality_control": {
"description": "True is use case is likely to be implemented as part of data validation operations.",
- "type": "boolean"
+ "type": [
+ "boolean",
+ "null"
+ ]
},
"known_limitations": {
"description": "Any current obstacles to implementing this use case. This could be a selection from one or more predefined categories including lack of standards, lack of relevant patient cohort, lack of funding, etc.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"name": {
"description": "A human-readable name for a thing.",
- "type": "string"
+ "type": [
+ "string",
+ "null"
+ ]
},
"related_to": {
"description": "A relationship that is asserted between two named things.",
"items": {
"type": "string"
},
- "type": "array"
+ "type": [
+ "array",
+ "null"
+ ]
},
"relevance_to_dgps": {
"description": "Relevance of the use case to one or more DGPs.",
"items": {
"$ref": "#/$defs/DataGeneratingProject"
},
- "type": "array"
+ "type": [
+ "array",
+ "null"
+ ]
},
"standards_and_tools_for_dgp_use": {
"description": "List of identifiers of standards and tools; those planned to be used, or already in use, by one or more Bridge2AI DGPs in addressing this use case, from those in the Standards Registry, or TBD if standards/tools not yet finalized for this use case.",
"items": {
"type": "string"
},
- "type": "array"
+ "type": [
+ "array",
+ "null"
+ ]
},
"subclass_of": {
"description": "Holds between two classes where the domain class is a specialization of the range class.",
"items": {
"type": "string"
},
- "type": "array"
+ "type": [
+ "array",
+ "null"
+ ]
},
"use_case_category": {
"$ref": "#/$defs/UseCaseCategory",
@@ -1661,7 +2655,10 @@
"items": {
"type": "string"
},
- "type": "array"
+ "type": [
+ "array",
+ "null"
+ ]
}
},
"required": [
@@ -1693,7 +2690,10 @@
"items": {
"$ref": "#/$defs/UseCase"
},
- "type": "array"
+ "type": [
+ "array",
+ "null"
+ ]
}
},
"title": "UseCaseContainer",
@@ -1701,7 +2701,7 @@
}
},
"$id": "https://w3id.org/bridge2ai/standards-schema-all",
- "$schema": "http://json-schema.org/draft-07/schema#",
+ "$schema": "https://json-schema.org/draft/2019-09/schema",
"additionalProperties": true,
"metamodel_version": "1.7.0",
"title": "standards-schema-all",
diff --git a/project/owl/standards_schema_all.owl.ttl b/project/owl/standards_schema_all.owl.ttl
index 947ecc9..8e16160 100644
--- a/project/owl/standards_schema_all.owl.ttl
+++ b/project/owl/standards_schema_all.owl.ttl
@@ -1,4 +1,4 @@
-@prefix IAO: .
+@prefix dcterms: .
@prefix linkml: .
@prefix owl: .
@prefix rdf: .
@@ -6,267 +6,222 @@
@prefix skos: .
@prefix xsd: .
+ a owl:Class,
+ linkml:ClassDefinition ;
+ rdfs:label "DataStandardOrToolContainer" ;
+ rdfs:subClassOf [ a owl:Restriction ;
+ owl:minCardinality 0 ;
+ owl:onProperty ],
+ [ a owl:Restriction ;
+ owl:allValuesFrom ;
+ owl:onProperty ] ;
+ skos:definition "A container for DataStandardOrTool(s)." ;
+ skos:inScheme .
+
+ a owl:ObjectProperty,
+ linkml:SlotDefinition ;
+ rdfs:label "use_conditions" ;
+ rdfs:range linkml:Uriorcurie ;
+ rdfs:subPropertyOf ;
+ skos:definition "Applicable conditions on use, as defined by the Data Use Ontology (DUO)." ;
+ skos:inScheme .
+
+ a owl:Class,
+ linkml:ClassDefinition ;
+ rdfs:label "DataSubstrateContainer" ;
+ rdfs:subClassOf [ a owl:Restriction ;
+ owl:minCardinality 0 ;
+ owl:onProperty ],
+ [ a owl:Restriction ;
+ owl:allValuesFrom ;
+ owl:onProperty ] ;
+ skos:definition "A container for DataSubstrates." ;
+ skos:inScheme .
+
+ a owl:Class,
+ linkml:ClassDefinition ;
+ rdfs:label "DataTopicContainer" ;
+ rdfs:subClassOf [ a owl:Restriction ;
+ owl:allValuesFrom ;
+ owl:onProperty ],
+ [ a owl:Restriction ;
+ owl:minCardinality 0 ;
+ owl:onProperty ] ;
+ skos:definition "A container for DataTopics." ;
+ skos:inScheme .
+
+ a owl:Class,
+ linkml:ClassDefinition ;
+ rdfs:label "OrganizationContainer" ;
+ rdfs:subClassOf [ a owl:Restriction ;
+ owl:allValuesFrom ;
+ owl:onProperty ],
+ [ a owl:Restriction ;
+ owl:minCardinality 0 ;
+ owl:onProperty ] ;
+ skos:definition "A container for Organizations." ;
+ skos:inScheme .
+
+ a owl:Ontology ;
+ rdfs:label "standards-schema-all" ;
+ dcterms:title "standards-schema-all" ;
+ skos:definition "High-level classes for Bridge2AI Standards schemas." .
+
+ a owl:Class,
+ linkml:ClassDefinition ;
+ rdfs:label "UseCaseContainer" ;
+ rdfs:subClassOf [ a owl:Restriction ;
+ owl:allValuesFrom ;
+ owl:onProperty ],
+ [ a owl:Restriction ;
+ owl:minCardinality 0 ;
+ owl:onProperty ] ;
+ skos:definition "A container for UseCase." ;
+ skos:inScheme .
+
+ a owl:ObjectProperty,
+ linkml:SlotDefinition ;
+ rdfs:label "type" ;
+ rdfs:domain ;
+ skos:definition "A generic slot for any label corresponding to the label for an entity type associated to the class." ;
+ skos:inScheme .
+
+ a owl:Class,
+ ;
+ rdfs:label "aireadi" ;
+ rdfs:subClassOf .
+
+ a owl:Class,
+ ;
+ rdfs:label "chorus" ;
+ rdfs:subClassOf .
+
+ a owl:Class,
+ ;
+ rdfs:label "voice" ;
+ rdfs:subClassOf .
+
+ a owl:Class,
+ ;
+ rdfs:label "cm4ai" ;
+ rdfs:subClassOf .
+
a owl:Class,
linkml:ClassDefinition ;
rdfs:label "BiomedicalStandard" ;
rdfs:subClassOf ;
skos:definition "Represents a standard in the Bridge2AI Standards Registry with particular applications or relevance to clinical or biomedical research purposes." ;
- linkml:attributes "{}" ;
- linkml:is_a "DataStandard" .
+ skos:inScheme .
a owl:Class,
linkml:ClassDefinition ;
rdfs:label "ModelRepository" ;
rdfs:subClassOf ;
- skos:definition "Represents a resource in the Bridge2AI Standards Registry serving to curate and store computational models. To be a respository, the resource must not index models alone." ;
- linkml:attributes "{}" ;
- linkml:is_a "DataStandardOrTool" .
+ skos:definition "Represents a resource in the Bridge2AI Standards Registry serving to curate and store computational models. To be a repository, the resource must not index models alone." ;
+ skos:inScheme .
a owl:Class,
linkml:ClassDefinition ;
rdfs:label "OntologyOrVocabulary" ;
rdfs:subClassOf ;
skos:definition "A set of concepts and categories, potentially defined or accompanied by their hierarchical relationships." ;
- linkml:attributes "{}" ;
- linkml:is_a "DataStandardOrTool" .
+ skos:inScheme .
a owl:Class,
linkml:ClassDefinition ;
rdfs:label "ReferenceDataOrDataset" ;
rdfs:subClassOf ;
skos:definition "Represents a resource in the Bridge2AI Standards Registry serving as a standardized, reusable data source." ;
- linkml:attributes "{}" ;
- linkml:is_a "DataStandardOrTool" .
+ skos:inScheme .
a owl:Class,
linkml:ClassDefinition ;
rdfs:label "ReferenceImplementation" ;
rdfs:subClassOf ;
skos:definition "Represents an implementation of one or more standards or tools in the Bridge2AI Standards Registry, whether as a full specification in a particular language or as an application to a specific use case." ;
- linkml:attributes "{}" ;
- linkml:is_a "DataStandardOrTool" .
+ skos:inScheme .
a owl:Class,
linkml:ClassDefinition ;
rdfs:label "Registry" ;
rdfs:subClassOf ;
skos:definition "Represents a resource in the Bridge2AI Standards Registry serving to curate and/or index other resources." ;
- linkml:attributes "{}" ;
- linkml:is_a "DataStandardOrTool" .
+ skos:inScheme .
a owl:Class,
linkml:ClassDefinition ;
rdfs:label "SoftwareOrTool" ;
rdfs:subClassOf ;
skos:definition "Represents a piece of software or computational tool in the Bridge2AI Standards Registry." ;
- linkml:attributes "{}" ;
- linkml:is_a "DataStandardOrTool" .
+ skos:inScheme .
a owl:Class,
linkml:ClassDefinition ;
rdfs:label "TrainingProgram" ;
rdfs:subClassOf ;
skos:definition "Represents a training program for skills and experience related to standards or tools in the Bridge2AI Standards Registry." ;
- linkml:attributes "{}" ;
- linkml:is_a "DataStandardOrTool" .
-
- a owl:ObjectProperty,
- linkml:SlotDefinition ;
- rdfs:label "use_conditions" ;
- rdfs:domain ;
- rdfs:range linkml:Uriorcurie ;
- rdfs:subPropertyOf ;
- skos:definition "Applicable conditions on use, as defined by the Data Use Ontology (DUO)." ;
- linkml:is_a "node_property" .
-
- a owl:Ontology ;
- rdfs:label "standards-schema-all" ;
- IAO:0000700 ,
- ,
- ,
- ,
- ,
- ;
- linkml:classes "{'NamedThing': ClassDefinition(name='NamedThing', id_prefixes=[], definition_uri='https://w3id.org/bridge2ai/standards-schema/NamedThing', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='A generic grouping for any identifiable entity', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/bridge2ai/standards-schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=['schema:Thing'], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['id', 'category', 'name', 'description', 'subclass_of', 'related_to', 'contributor_name', 'contributor_github_name', 'contributor_orcid', 'contribution_date'], slot_usage={}, attributes={}, class_uri='schema:Thing', subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'AnatomicalEntity': ClassDefinition(name='AnatomicalEntity', id_prefixes=['uberon'], definition_uri='https://w3id.org/bridge2ai/standards-schema/AnatomicalEntity', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='A subcellular location, cell type or gross anatomical part', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/bridge2ai/standards-schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['uberon:0001062', 'wikidata:Q4936952'], close_mappings=[], related_mappings=[], narrow_mappings=['ncit:C12219'], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a='NamedThing', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['id', 'category', 'name', 'description', 'subclass_of', 'related_to', 'contributor_name', 'contributor_github_name', 'contributor_orcid', 'contribution_date'], slot_usage={}, attributes={}, class_uri='B2AI:AnatomicalEntity', subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'DataStandardOrTool': ClassDefinition(name='DataStandardOrTool', id_prefixes=[], definition_uri='https://w3id.org/bridge2ai/standards-datastandardortool-schema/DataStandardOrTool', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Represents a standard or tool in the Bridge2AI Standards Registry.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/bridge2ai/standards-datastandardortool-schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a='NamedThing', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['id', 'category', 'name', 'description', 'subclass_of', 'related_to', 'contributor_name', 'contributor_github_name', 'contributor_orcid', 'contribution_date', 'collection', 'concerns_data_topic', 'has_relevant_organization', 'purpose_detail', 'is_open', 'requires_registration', 'url', 'publication', 'formal_specification', 'not_relevant_to_dgps'], slot_usage={}, attributes={}, class_uri='B2AI_STANDARD:DataStandardOrTool', subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'DataStandard': ClassDefinition(name='DataStandard', id_prefixes=[], definition_uri='https://w3id.org/bridge2ai/standards-datastandardortool-schema/DataStandard', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Represents a general purpose standard in the Bridge2AI Standards Registry.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/bridge2ai/standards-datastandardortool-schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a='DataStandardOrTool', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['id', 'category', 'name', 'description', 'subclass_of', 'related_to', 'contributor_name', 'contributor_github_name', 'contributor_orcid', 'contribution_date', 'collection', 'concerns_data_topic', 'has_relevant_organization', 'purpose_detail', 'is_open', 'requires_registration', 'url', 'publication', 'formal_specification', 'not_relevant_to_dgps'], slot_usage={}, attributes={}, class_uri='B2AI_STANDARD:DataStandard', subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'BiomedicalStandard': ClassDefinition(name='BiomedicalStandard', id_prefixes=[], definition_uri='https://w3id.org/bridge2ai/standards-datastandardortool-schema/BiomedicalStandard', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Represents a standard in the Bridge2AI Standards Registry with particular applications or relevance to clinical or biomedical research purposes.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/bridge2ai/standards-datastandardortool-schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a='DataStandard', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['id', 'category', 'name', 'description', 'subclass_of', 'related_to', 'contributor_name', 'contributor_github_name', 'contributor_orcid', 'contribution_date', 'collection', 'concerns_data_topic', 'has_relevant_organization', 'purpose_detail', 'is_open', 'requires_registration', 'url', 'publication', 'formal_specification', 'not_relevant_to_dgps'], slot_usage={}, attributes={}, class_uri='B2AI_STANDARD:BiomedicalStandard', subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'Registry': ClassDefinition(name='Registry', id_prefixes=[], definition_uri='https://w3id.org/bridge2ai/standards-datastandardortool-schema/Registry', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Represents a resource in the Bridge2AI Standards Registry serving to curate and/or index other resources.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/bridge2ai/standards-datastandardortool-schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a='DataStandardOrTool', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['id', 'category', 'name', 'description', 'subclass_of', 'related_to', 'contributor_name', 'contributor_github_name', 'contributor_orcid', 'contribution_date', 'collection', 'concerns_data_topic', 'has_relevant_organization', 'purpose_detail', 'is_open', 'requires_registration', 'url', 'publication', 'formal_specification', 'not_relevant_to_dgps'], slot_usage={}, attributes={}, class_uri='B2AI_STANDARD:Registry', subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'OntologyOrVocabulary': ClassDefinition(name='OntologyOrVocabulary', id_prefixes=[], definition_uri='https://w3id.org/bridge2ai/standards-datastandardortool-schema/OntologyOrVocabulary', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='A set of concepts and categories, potentially defined or accompanied by their hierarchical relationships.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/bridge2ai/standards-datastandardortool-schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a='DataStandardOrTool', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['id', 'category', 'name', 'description', 'subclass_of', 'related_to', 'contributor_name', 'contributor_github_name', 'contributor_orcid', 'contribution_date', 'collection', 'concerns_data_topic', 'has_relevant_organization', 'purpose_detail', 'is_open', 'requires_registration', 'url', 'publication', 'formal_specification', 'not_relevant_to_dgps'], slot_usage={}, attributes={}, class_uri='B2AI_STANDARD:OntologyOrVocabulary', subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'ModelRepository': ClassDefinition(name='ModelRepository', id_prefixes=[], definition_uri='https://w3id.org/bridge2ai/standards-datastandardortool-schema/ModelRepository', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Represents a resource in the Bridge2AI Standards Registry serving to curate and store computational models. To be a respository, the resource must not index models alone.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/bridge2ai/standards-datastandardortool-schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a='DataStandardOrTool', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['id', 'category', 'name', 'description', 'subclass_of', 'related_to', 'contributor_name', 'contributor_github_name', 'contributor_orcid', 'contribution_date', 'collection', 'concerns_data_topic', 'has_relevant_organization', 'purpose_detail', 'is_open', 'requires_registration', 'url', 'publication', 'formal_specification', 'not_relevant_to_dgps'], slot_usage={}, attributes={}, class_uri='B2AI_STANDARD:ModelRepository', subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'ReferenceDataOrDataset': ClassDefinition(name='ReferenceDataOrDataset', id_prefixes=[], definition_uri='https://w3id.org/bridge2ai/standards-datastandardortool-schema/ReferenceDataOrDataset', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Represents a resource in the Bridge2AI Standards Registry serving as a standardized, reusable data source.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/bridge2ai/standards-datastandardortool-schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a='DataStandardOrTool', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['id', 'category', 'name', 'description', 'subclass_of', 'related_to', 'contributor_name', 'contributor_github_name', 'contributor_orcid', 'contribution_date', 'collection', 'concerns_data_topic', 'has_relevant_organization', 'purpose_detail', 'is_open', 'requires_registration', 'url', 'publication', 'formal_specification', 'not_relevant_to_dgps'], slot_usage={}, attributes={}, class_uri='B2AI_STANDARD:ReferenceDataOrDataset', subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'SoftwareOrTool': ClassDefinition(name='SoftwareOrTool', id_prefixes=[], definition_uri='https://w3id.org/bridge2ai/standards-datastandardortool-schema/SoftwareOrTool', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Represents a piece of software or computational tool in the Bridge2AI Standards Registry.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/bridge2ai/standards-datastandardortool-schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a='DataStandardOrTool', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['id', 'category', 'name', 'description', 'subclass_of', 'related_to', 'contributor_name', 'contributor_github_name', 'contributor_orcid', 'contribution_date', 'collection', 'concerns_data_topic', 'has_relevant_organization', 'purpose_detail', 'is_open', 'requires_registration', 'url', 'publication', 'formal_specification', 'not_relevant_to_dgps'], slot_usage={}, attributes={}, class_uri='B2AI_STANDARD:SoftwareOrTool', subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'ReferenceImplementation': ClassDefinition(name='ReferenceImplementation', id_prefixes=[], definition_uri='https://w3id.org/bridge2ai/standards-datastandardortool-schema/ReferenceImplementation', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Represents an implementation of one or more standards or tools in the Bridge2AI Standards Registry, whether as a full specification in a particular language or as an application to a specific use case.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/bridge2ai/standards-datastandardortool-schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a='DataStandardOrTool', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['id', 'category', 'name', 'description', 'subclass_of', 'related_to', 'contributor_name', 'contributor_github_name', 'contributor_orcid', 'contribution_date', 'collection', 'concerns_data_topic', 'has_relevant_organization', 'purpose_detail', 'is_open', 'requires_registration', 'url', 'publication', 'formal_specification', 'not_relevant_to_dgps'], slot_usage={}, attributes={}, class_uri='B2AI_STANDARD:ReferenceImplementation', subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'TrainingProgram': ClassDefinition(name='TrainingProgram', id_prefixes=[], definition_uri='https://w3id.org/bridge2ai/standards-datastandardortool-schema/TrainingProgram', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Represents a training program for skills and experience related to standards or tools in the Bridge2AI Standards Registry.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/bridge2ai/standards-datastandardortool-schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a='DataStandardOrTool', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['id', 'category', 'name', 'description', 'subclass_of', 'related_to', 'contributor_name', 'contributor_github_name', 'contributor_orcid', 'contribution_date', 'collection', 'concerns_data_topic', 'has_relevant_organization', 'purpose_detail', 'is_open', 'requires_registration', 'url', 'publication', 'formal_specification', 'not_relevant_to_dgps'], slot_usage={}, attributes={}, class_uri='B2AI_STANDARD:TrainingProgram', subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'DataStandardOrToolContainer': ClassDefinition(name='DataStandardOrToolContainer', id_prefixes=[], definition_uri='https://w3id.org/bridge2ai/standards-datastandardortool-schema/DataStandardOrToolContainer', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='A container for DataStandardOrTool(s).', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/bridge2ai/standards-datastandardortool-schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['data_standardortools_collection'], slot_usage={}, attributes={}, class_uri='B2AI_STANDARD:DataStandardOrToolContainer', subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'DataSubstrate': ClassDefinition(name='DataSubstrate', id_prefixes=[], definition_uri='https://w3id.org/bridge2ai/standards-datasubstrate-schema/DataSubstrate', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Represents a data substrate for Bridge2AI data. This may be a high-level data structure or a specific implementation of that structure. Interpret as \"data, in this form or format\", as compared to DataStandard, which refers to the set of rules defining a standard. For example, data in TSV format is represented as a DataSubstrate but the concept of TSV format is a DataStandard.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/bridge2ai/standards-datasubstrate-schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a='NamedThing', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['id', 'category', 'name', 'description', 'subclass_of', 'related_to', 'contributor_name', 'contributor_github_name', 'contributor_orcid', 'contribution_date', 'edam_id', 'mesh_id', 'ncit_id', 'metadata_storage', 'file_extensions', 'limitations'], slot_usage={}, attributes={}, class_uri='B2AI_SUBSTRATE:DataSubstrate', subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'DataSubstrateContainer': ClassDefinition(name='DataSubstrateContainer', id_prefixes=[], definition_uri='https://w3id.org/bridge2ai/standards-datasubstrate-schema/DataSubstrateContainer', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='A container for DataSubstrates.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/bridge2ai/standards-datasubstrate-schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['data_substrates_collection'], slot_usage={}, attributes={}, class_uri='B2AI_SUBSTRATE:DataSubstrateContainer', subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'DataTopic': ClassDefinition(name='DataTopic', id_prefixes=[], definition_uri='https://w3id.org/bridge2ai/standards-datatopic-schema/DataTopic', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Represents a general data topic for Bridge2AI data or the tools/standards applied to the data.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/bridge2ai/standards-datatopic-schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a='NamedThing', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['id', 'category', 'name', 'description', 'subclass_of', 'related_to', 'contributor_name', 'contributor_github_name', 'contributor_orcid', 'contribution_date', 'edam_id', 'mesh_id', 'ncit_id', 'topic_involves_anatomy'], slot_usage={}, attributes={}, class_uri='B2AI_TOPIC:DataTopic', subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'DataTopicContainer': ClassDefinition(name='DataTopicContainer', id_prefixes=[], definition_uri='https://w3id.org/bridge2ai/standards-datatopic-schema/DataTopicContainer', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='A container for DataTopics.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/bridge2ai/standards-datatopic-schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['data_topics_collection'], slot_usage={}, attributes={}, class_uri='B2AI_TOPIC:DataTopicContainer', subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'Organization': ClassDefinition(name='Organization', id_prefixes=[], definition_uri='https://w3id.org/bridge2ai/standards-organization-schema/Organization', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Represents a group or organization related to or responsible for one or more Bridge2AI standards.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/bridge2ai/standards-organization-schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a='NamedThing', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['id', 'category', 'name', 'description', 'subclass_of', 'contributor_name', 'contributor_github_name', 'contributor_orcid', 'contribution_date', 'ror_id', 'wikidata_id', 'url', 'related_to'], slot_usage={}, attributes={}, class_uri='B2AI_ORG:Organization', subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'OrganizationContainer': ClassDefinition(name='OrganizationContainer', id_prefixes=[], definition_uri='https://w3id.org/bridge2ai/standards-organization-schema/OrganizationContainer', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='A container for Organizations.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/bridge2ai/standards-organization-schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['organizations'], slot_usage={}, attributes={}, class_uri='B2AI_ORG:OrganizationContainer', subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'UseCase': ClassDefinition(name='UseCase', id_prefixes=[], definition_uri='https://w3id.org/bridge2ai/standards-usecase-schema/UseCase', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Represents a use case for Bridge2AI standards.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/bridge2ai/standards-usecase-schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a='NamedThing', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['id', 'category', 'name', 'description', 'subclass_of', 'related_to', 'contributor_name', 'contributor_github_name', 'contributor_orcid', 'contribution_date', 'UseCase_use_case_category', 'known_limitations', 'relevance_to_dgps', 'data_topics', 'data_substrates', 'standards_and_tools_for_dgp_use', 'alternative_standards_and_tools', 'enables', 'involved_in_experimental_design', 'involved_in_metadata_management', 'involved_in_quality_control', 'xref'], slot_usage={'use_case_category': SlotDefinition(name='use_case_category', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range=None, range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri='B2AI_USECASE:UseCase', subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'UseCaseContainer': ClassDefinition(name='UseCaseContainer', id_prefixes=[], definition_uri='https://w3id.org/bridge2ai/standards-usecase-schema/UseCaseContainer', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='A container for UseCase.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/bridge2ai/standards-usecase-schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['use_cases'], slot_usage={}, attributes={}, class_uri='B2AI_USECASE:UseCaseContainer', subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={})}" ;
- linkml:enums "{'DataGeneratingProject': EnumDefinition(name='DataGeneratingProject', id_prefixes=[], definition_uri='https://w3id.org/bridge2ai/standards-schema/DataGeneratingProject', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='One of the Bridge2AI Data Generating Projects.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/bridge2ai/standards-schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'aireadi': PermissibleValue(text='aireadi', description='AI-READI: Uncovering the details of how human health is restored after disease, using type 2 diabetes as a model.', meaning='https://reporter.nih.gov/project-details/10471118', unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'chorus': PermissibleValue(text='chorus', description='CHoRUS: Collaborative Hospital Repository Uniting Standards. Using imaging, clinical, and other data collected in an ICU setting for diagnosis and risk prediction.', meaning='https://reporter.nih.gov/project-details/10472824', unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'cm4ai': PermissibleValue(text='cm4ai', description='CM4AI: Cell Maps for AI. Mapping spatiotemporal architecture of human cells to interpret cell structure/function in health and disease.', meaning='https://reporter.nih.gov/project-details/10473403', unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'voice': PermissibleValue(text='voice', description='Voice as a Biomarker of Health: Building an ethically sourced, bioaccoustic database to understand disease like never before.', meaning='https://reporter.nih.gov/project-details/10473236', unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'StandardsCollectionTag': EnumDefinition(name='StandardsCollectionTag', id_prefixes=[], definition_uri='https://w3id.org/bridge2ai/standards-datastandardortool-schema/StandardsCollectionTag', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Tags for specific sets of standards.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/bridge2ai/standards-datastandardortool-schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'audiovisual': PermissibleValue(text='audiovisual', description='Audiovisual Standard', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'deprecated': PermissibleValue(text='deprecated', description='Deprecated', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'fileformat': PermissibleValue(text='fileformat', description='File Format', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'toolkit': PermissibleValue(text='toolkit', description='Bioinformatics Toolkit', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'clinicaldata': PermissibleValue(text='clinicaldata', description='Clinical Data', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'multimodal': PermissibleValue(text='multimodal', description='Multimodal Data Integration', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'text': PermissibleValue(text='text', description='Text Data', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'cloudplatform': PermissibleValue(text='cloudplatform', description='Cloud Research Platform', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'cloudservice': PermissibleValue(text='cloudservice', description='Cloud Service', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'codesystem': PermissibleValue(text='codesystem', description='Code System', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'datamodel': PermissibleValue(text='datamodel', description='Data Model', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'dataregistry': PermissibleValue(text='dataregistry', description='Data Registry', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'softwareregistry': PermissibleValue(text='softwareregistry', description='Software Registry', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'datavisualization': PermissibleValue(text='datavisualization', description='Data Visualization', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'notebookplatform': PermissibleValue(text='notebookplatform', description='Notebook Platform', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'datasheets': PermissibleValue(text='datasheets', description='Datasheets', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'machinelearningframework': PermissibleValue(text='machinelearningframework', description='Machine Learning Framework', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'workflowlanguage': PermissibleValue(text='workflowlanguage', description='Workflow Language', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'diagnosticinstrument': PermissibleValue(text='diagnosticinstrument', description='Diagnostic Instrument', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'drugdata': PermissibleValue(text='drugdata', description='Drug Data', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'eyedata': PermissibleValue(text='eyedata', description='Eye Data', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'markuplanguage': PermissibleValue(text='markuplanguage', description='Markup Language', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'graphdataplatform': PermissibleValue(text='graphdataplatform', description='Graph Data Platform', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'guidelines': PermissibleValue(text='guidelines', description='Guidelines', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'minimuminformationschema': PermissibleValue(text='minimuminformationschema', description='Minimum Information Schema', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'modelcards': PermissibleValue(text='modelcards', description='Model Cards', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'obofoundry': PermissibleValue(text='obofoundry', description='OBO Foundry', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'ontologyregistry': PermissibleValue(text='ontologyregistry', description='Ontology Registry', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'policy': PermissibleValue(text='policy', description='Policy', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'proteindata': PermissibleValue(text='proteindata', description='Protein Data', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'referencegenome': PermissibleValue(text='referencegenome', description='Reference Genome', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'scrnaseqanalysis': PermissibleValue(text='scrnaseqanalysis', description='scRNA-seq Analysis', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'speechdata': PermissibleValue(text='speechdata', description='Speech Data', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'standardsregistry': PermissibleValue(text='standardsregistry', description='Standards Registry', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'has_ai_application': PermissibleValue(text='has_ai_application', description='Has a direct AI application, defined as standards/tools that are: associated with ML or neural networks; schemas, or have schemas; data models; associated with DICOM; associated with AI; associated with standards used within Bridge2AI', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'UseCaseCategory': EnumDefinition(name='UseCaseCategory', id_prefixes=[], definition_uri='https://w3id.org/bridge2ai/standards-usecase-schema/UseCaseCategory', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Category of use case.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/bridge2ai/standards-usecase-schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'acquisition': PermissibleValue(text='acquisition', description='Acquisition', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'integration': PermissibleValue(text='integration', description='Integration', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'standardization': PermissibleValue(text='standardization', description='Standardization', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'modeling': PermissibleValue(text='modeling', description='Modeling', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'application': PermissibleValue(text='application', description='Application', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'assessment': PermissibleValue(text='assessment', description='Assessment', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[])}" ;
- linkml:id "https://w3id.org/bridge2ai/standards-schema-all" ;
- linkml:imports "linkml:types",
- "standards_datastandardortool_schema",
- "standards_datasubstrate_schema",
- "standards_datatopic_schema",
- "standards_organization_schema",
- "standards_schema",
- "standards_usecase_schema" ;
- linkml:types "{'string': TypeDefinition(name='string', id_prefixes=[], definition_uri='https://w3id.org/linkml/String', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='A character string', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['In RDF serializations, a slot with range of string is treated as a literal or type xsd:string. If you are authoring schemas in LinkML YAML, the type is referenced with the lower case \"string\".'], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/types', imported_from='linkml:types', source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['schema:Text'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, typeof=None, base='str', uri='xsd:string', repr=None, union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'integer': TypeDefinition(name='integer', id_prefixes=[], definition_uri='https://w3id.org/linkml/Integer', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='An integer', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['If you are authoring schemas in LinkML YAML, the type is referenced with the lower case \"integer\".'], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/types', imported_from='linkml:types', source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['schema:Integer'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, typeof=None, base='int', uri='xsd:integer', repr=None, union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'boolean': TypeDefinition(name='boolean', id_prefixes=[], definition_uri='https://w3id.org/linkml/Boolean', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='A binary (true or false) value', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['If you are authoring schemas in LinkML YAML, the type is referenced with the lower case \"boolean\".'], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/types', imported_from='linkml:types', source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['schema:Boolean'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, typeof=None, base='Bool', uri='xsd:boolean', repr='bool', union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'float': TypeDefinition(name='float', id_prefixes=[], definition_uri='https://w3id.org/linkml/Float', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='A real number that conforms to the xsd:float specification', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['If you are authoring schemas in LinkML YAML, the type is referenced with the lower case \"float\".'], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/types', imported_from='linkml:types', source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['schema:Float'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, typeof=None, base='float', uri='xsd:float', repr=None, union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'double': TypeDefinition(name='double', id_prefixes=[], definition_uri='https://w3id.org/linkml/Double', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='A real number that conforms to the xsd:double specification', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['If you are authoring schemas in LinkML YAML, the type is referenced with the lower case \"double\".'], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/types', imported_from='linkml:types', source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['schema:Float'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, typeof=None, base='float', uri='xsd:double', repr=None, union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'decimal': TypeDefinition(name='decimal', id_prefixes=[], definition_uri='https://w3id.org/linkml/Decimal', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='A real number with arbitrary precision that conforms to the xsd:decimal specification', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['If you are authoring schemas in LinkML YAML, the type is referenced with the lower case \"decimal\".'], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/types', imported_from='linkml:types', source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=['schema:Number'], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, typeof=None, base='Decimal', uri='xsd:decimal', repr=None, union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'time': TypeDefinition(name='time', id_prefixes=[], definition_uri='https://w3id.org/linkml/Time', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='A time object represents a (local) time of day, independent of any particular day', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['URI is dateTime because OWL reasoners do not work with straight date or time', 'If you are authoring schemas in LinkML YAML, the type is referenced with the lower case \"time\".'], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/types', imported_from='linkml:types', source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['schema:Time'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, typeof=None, base='XSDTime', uri='xsd:time', repr='str', union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'date': TypeDefinition(name='date', id_prefixes=[], definition_uri='https://w3id.org/linkml/Date', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='a date (year, month and day) in an idealized calendar', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[\"URI is dateTime because OWL reasoners don't work with straight date or time\", 'If you are authoring schemas in LinkML YAML, the type is referenced with the lower case \"date\".'], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/types', imported_from='linkml:types', source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['schema:Date'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, typeof=None, base='XSDDate', uri='xsd:date', repr='str', union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'datetime': TypeDefinition(name='datetime', id_prefixes=[], definition_uri='https://w3id.org/linkml/Datetime', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='The combination of a date and time', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['If you are authoring schemas in LinkML YAML, the type is referenced with the lower case \"datetime\".'], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/types', imported_from='linkml:types', source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['schema:DateTime'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, typeof=None, base='XSDDateTime', uri='xsd:dateTime', repr='str', union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'date_or_datetime': TypeDefinition(name='date_or_datetime', id_prefixes=[], definition_uri='https://w3id.org/linkml/DateOrDatetime', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Either a date or a datetime', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['If you are authoring schemas in LinkML YAML, the type is referenced with the lower case \"date_or_datetime\".'], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/types', imported_from='linkml:types', source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, typeof=None, base='str', uri='linkml:DateOrDatetime', repr='str', union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'uriorcurie': TypeDefinition(name='uriorcurie', id_prefixes=[], definition_uri='https://w3id.org/linkml/Uriorcurie', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='a URI or a CURIE', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['If you are authoring schemas in LinkML YAML, the type is referenced with the lower case \"uriorcurie\".'], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/types', imported_from='linkml:types', source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, typeof=None, base='URIorCURIE', uri='xsd:anyURI', repr='str', union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'curie': TypeDefinition(name='curie', id_prefixes=[], definition_uri='https://w3id.org/linkml/Curie', local_names={}, conforms_to='https://www.w3.org/TR/curie/', implements=[], extensions={}, annotations={}, description='a compact URI', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['If you are authoring schemas in LinkML YAML, the type is referenced with the lower case \"curie\".'], comments=['in RDF serializations this MUST be expanded to a URI', 'in non-RDF serializations MAY be serialized as the compact representation'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/types', imported_from='linkml:types', source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, typeof=None, base='Curie', uri='xsd:string', repr='str', union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'uri': TypeDefinition(name='uri', id_prefixes=[], definition_uri='https://w3id.org/linkml/Uri', local_names={}, conforms_to='https://www.ietf.org/rfc/rfc3987.txt', implements=[], extensions={}, annotations={}, description='a complete URI', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['If you are authoring schemas in LinkML YAML, the type is referenced with the lower case \"uri\".'], comments=['in RDF serializations a slot with range of uri is treated as a literal or type xsd:anyURI unless it is an identifier or a reference to an identifier, in which case it is translated directly to a node'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/types', imported_from='linkml:types', source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['schema:URL'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, typeof=None, base='URI', uri='xsd:anyURI', repr='str', union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ncname': TypeDefinition(name='ncname', id_prefixes=[], definition_uri='https://w3id.org/linkml/Ncname', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Prefix part of CURIE', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['If you are authoring schemas in LinkML YAML, the type is referenced with the lower case \"ncname\".'], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/types', imported_from='linkml:types', source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, typeof=None, base='NCName', uri='xsd:string', repr='str', union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'objectidentifier': TypeDefinition(name='objectidentifier', id_prefixes=[], definition_uri='https://w3id.org/linkml/Objectidentifier', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='A URI or CURIE that represents an object in the model.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['If you are authoring schemas in LinkML YAML, the type is referenced with the lower case \"objectidentifier\".'], comments=['Used for inheritance and type checking'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/types', imported_from='linkml:types', source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, typeof=None, base='ElementIdentifier', uri='shex:iri', repr='str', union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'nodeidentifier': TypeDefinition(name='nodeidentifier', id_prefixes=[], definition_uri='https://w3id.org/linkml/Nodeidentifier', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='A URI, CURIE or BNODE that represents a node in a model.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['If you are authoring schemas in LinkML YAML, the type is referenced with the lower case \"nodeidentifier\".'], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/types', imported_from='linkml:types', source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, typeof=None, base='NodeIdentifier', uri='shex:nonLiteral', repr='str', union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'jsonpointer': TypeDefinition(name='jsonpointer', id_prefixes=[], definition_uri='https://w3id.org/linkml/Jsonpointer', local_names={}, conforms_to='https://datatracker.ietf.org/doc/html/rfc6901', implements=[], extensions={}, annotations={}, description='A string encoding a JSON Pointer. The value of the string MUST conform to JSON Point syntax and SHOULD dereference to a valid object within the current instance document when encoded in tree form.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['If you are authoring schemas in LinkML YAML, the type is referenced with the lower case \"jsonpointer\".'], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/types', imported_from='linkml:types', source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, typeof=None, base='str', uri='xsd:string', repr='str', union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'jsonpath': TypeDefinition(name='jsonpath', id_prefixes=[], definition_uri='https://w3id.org/linkml/Jsonpath', local_names={}, conforms_to='https://www.ietf.org/archive/id/draft-goessner-dispatch-jsonpath-00.html', implements=[], extensions={}, annotations={}, description='A string encoding a JSON Path. The value of the string MUST conform to JSON Point syntax and SHOULD dereference to zero or more valid objects within the current instance document when encoded in tree form.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['If you are authoring schemas in LinkML YAML, the type is referenced with the lower case \"jsonpath\".'], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/types', imported_from='linkml:types', source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, typeof=None, base='str', uri='xsd:string', repr='str', union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sparqlpath': TypeDefinition(name='sparqlpath', id_prefixes=[], definition_uri='https://w3id.org/linkml/Sparqlpath', local_names={}, conforms_to='https://www.w3.org/TR/sparql11-query/#propertypaths', implements=[], extensions={}, annotations={}, description='A string encoding a SPARQL Property Path. The value of the string MUST conform to SPARQL syntax and SHOULD dereference to zero or more valid objects within the current instance document when encoded as RDF.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['If you are authoring schemas in LinkML YAML, the type is referenced with the lower case \"sparqlpath\".'], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/types', imported_from='linkml:types', source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, typeof=None, base='str', uri='xsd:string', repr='str', union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'category_type': TypeDefinition(name='category_type', id_prefixes=[], definition_uri='https://w3id.org/bridge2ai/standards-schema/CategoryType', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='A primitive type in which the value denotes a class within the model.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/bridge2ai/standards-schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, typeof='uriorcurie', base='URIorCURIE', uri='xsd:anyURI', repr='str', union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'edam_identifier': TypeDefinition(name='edam_identifier', id_prefixes=['edam.data', 'edam.format', 'edam.operation', 'edam.topic'], definition_uri='https://w3id.org/bridge2ai/standards-schema/EdamIdentifier', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Identifier from EDAM ontology', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/bridge2ai/standards-schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, typeof='uriorcurie', base='URIorCURIE', uri='xsd:anyURI', repr='str', union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'mesh_identifier': TypeDefinition(name='mesh_identifier', id_prefixes=['mesh'], definition_uri='https://w3id.org/bridge2ai/standards-schema/MeshIdentifier', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Identifier from Medical Subject Headings (MeSH) biomedical vocabulary.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/bridge2ai/standards-schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, typeof='uriorcurie', base='URIorCURIE', uri='xsd:anyURI', repr='str', union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ncit_identifier': TypeDefinition(name='ncit_identifier', id_prefixes=['NCIT'], definition_uri='https://w3id.org/bridge2ai/standards-schema/NcitIdentifier', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Identifier from NCIT reference terminology with broad coverage of the cancer domain.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/bridge2ai/standards-schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, typeof='uriorcurie', base='URIorCURIE', uri='xsd:anyURI', repr='str', union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ror_identifier': TypeDefinition(name='ror_identifier', id_prefixes=['ror'], definition_uri='https://w3id.org/bridge2ai/standards-organization-schema/RorIdentifier', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Identifier from Research Organization Registry.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/bridge2ai/standards-organization-schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, typeof='uriorcurie', base='URIorCURIE', uri='xsd:anyURI', repr='str', union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'wikidata_identifier': TypeDefinition(name='wikidata_identifier', id_prefixes=['wikidata'], definition_uri='https://w3id.org/bridge2ai/standards-organization-schema/WikidataIdentifier', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Identifier from Wikidata open knowledge base.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/bridge2ai/standards-organization-schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, typeof='uriorcurie', base='URIorCURIE', uri='xsd:anyURI', repr='str', union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}" .
-
-linkml:SubsetDefinition a owl:Class ;
- rdfs:label "subset_definition" ;
- linkml:attributes "{}" ;
- linkml:is_a "element" .
-
-linkml:topValue a owl:DatatypeProperty ;
- rdfs:label "value" .
-
- a owl:Class,
- linkml:ClassDefinition ;
- rdfs:label "DataStandard" ;
- rdfs:subClassOf ;
- skos:definition "Represents a general purpose standard in the Bridge2AI Standards Registry." ;
- linkml:attributes "{}" ;
- linkml:is_a "DataStandardOrTool" .
-
- a owl:Class,
- linkml:ClassDefinition ;
- rdfs:label "DataStandardOrToolContainer" ;
- rdfs:subClassOf [ a owl:Restriction ;
- owl:allValuesFrom ;
- owl:onProperty ] ;
- skos:definition "A container for DataStandardOrTool(s)." ;
- linkml:attributes "{}" .
+ skos:inScheme .
a owl:ObjectProperty,
linkml:SlotDefinition ;
rdfs:label "collection" ;
- rdfs:domain ;
- rdfs:range ;
+ rdfs:range ;
rdfs:subPropertyOf ;
skos:definition "Tags for specific sets of standards." ;
- linkml:is_a "node_property" .
-
- a owl:ObjectProperty,
- linkml:SlotDefinition ;
- rdfs:label "concerns_data_topic" ;
- rdfs:domain ;
- rdfs:range ;
- rdfs:subPropertyOf ;
- skos:definition "Subject standard is generally applied in the context of object data topic." ;
- linkml:is_a "related_to" .
+ skos:inScheme .
a owl:ObjectProperty,
linkml:SlotDefinition ;
rdfs:label "data_standardortools_collection" ;
rdfs:range ;
- skos:definition "Collection of associated data standards or tools" .
-
- a owl:ObjectProperty,
- linkml:SlotDefinition ;
- rdfs:label "formal_specification" ;
- rdfs:domain ;
- rdfs:range linkml:Uriorcurie ;
- rdfs:subPropertyOf ;
- skos:definition "Relevant code repository or other location for a formal specification of the standard or tool. Often a URL, particularly to a Git repository." ;
- linkml:is_a "node_property" .
-
- a owl:ObjectProperty,
- linkml:SlotDefinition ;
- rdfs:label "has_relevant_organization" ;
- rdfs:domain ;
- rdfs:range ;
- rdfs:subPropertyOf ;
- skos:definition "Subject standard is managed or otherwise guided buy the object organization(s)." ;
- linkml:is_a "related_to" .
-
- a owl:ObjectProperty,
- linkml:SlotDefinition ;
- rdfs:label "is_open" ;
- rdfs:domain ;
- rdfs:range linkml:Boolean ;
- rdfs:subPropertyOf ;
- skos:definition "Is the standard or tool FAIR and available free of cost?" ;
- linkml:is_a "node_property" .
-
- a owl:ObjectProperty,
- linkml:SlotDefinition ;
- rdfs:label "not_relevant_to_dgps" ;
- rdfs:domain ;
- rdfs:range linkml:Boolean ;
- rdfs:subPropertyOf ;
- skos:definition "Is the standard or tool currently relevant to DGPs?" ;
- linkml:is_a "node_property" .
-
- a owl:ObjectProperty,
- linkml:SlotDefinition ;
- rdfs:label "publication" ;
- rdfs:domain ;
- rdfs:range linkml:Uriorcurie ;
- rdfs:subPropertyOf ;
- skos:definition "Relevant publication for the standard or tool. Prefer a DOI or PUBMED." ;
- linkml:is_a "node_property" .
-
- a owl:ObjectProperty,
- linkml:SlotDefinition ;
- rdfs:label "purpose_detail" ;
- rdfs:domain ;
- rdfs:range linkml:String ;
- rdfs:subPropertyOf ;
- skos:definition "Text description of the standard or tool." ;
- linkml:is_a "node_property" .
+ skos:definition "Collection of associated data standards or tools" ;
+ skos:inScheme .
- a owl:ObjectProperty,
+ a owl:ObjectProperty,
linkml:SlotDefinition ;
- rdfs:label "requires_registration" ;
- rdfs:domain ;
- rdfs:range linkml:Boolean ;
+ rdfs:label "has_training_resource" ;
+ rdfs:range ;
rdfs:subPropertyOf ;
- skos:definition "Does usage of the standard or tool require registrion of a user or group with some organization or managerial body?" ;
- linkml:is_a "node_property" .
-
- a owl:Class,
- linkml:ClassDefinition ;
- rdfs:label "DataSubstrateContainer" ;
- rdfs:subClassOf [ a owl:Restriction ;
- owl:allValuesFrom ;
- owl:onProperty ] ;
- skos:definition "A container for DataSubstrates." ;
- linkml:attributes "{}" .
+ skos:definition "Relevant training resources, standard usage manuals, or other documentation for the standard or tool." ;
+ skos:inScheme .
a owl:ObjectProperty,
linkml:SlotDefinition ;
rdfs:label "data_substrates_collection" ;
rdfs:range ;
- skos:definition "Collection of associated data substrates" .
+ skos:definition "Collection of associated data substrates" ;
+ skos:inScheme .
a owl:ObjectProperty,
linkml:SlotDefinition ;
rdfs:label "file_extensions" ;
- rdfs:domain ;
rdfs:range linkml:String ;
rdfs:subPropertyOf ;
skos:definition "Commonly used file extensions for this substrate." ;
- linkml:is_a "node_property" .
+ skos:inScheme .
a owl:ObjectProperty,
linkml:SlotDefinition ;
rdfs:label "limitations" ;
- rdfs:domain ;
rdfs:range linkml:String ;
rdfs:subPropertyOf ;
skos:definition "Potential obstacles particular to this substrate or implementation. " ;
- linkml:is_a "node_property" .
+ skos:inScheme .
a owl:ObjectProperty,
linkml:SlotDefinition ;
rdfs:label "metadata_storage" ;
- rdfs:domain ;
- rdfs:range linkml:String ;
+ rdfs:range [ owl:intersectionOf ( linkml:String ) ] ;
rdfs:subPropertyOf ;
skos:definition "Data Substrate in which metadata is stored." ;
- linkml:is_a "node_property" .
-
- a owl:Class,
- linkml:ClassDefinition ;
- rdfs:label "DataTopicContainer" ;
- rdfs:subClassOf [ a owl:Restriction ;
- owl:allValuesFrom ;
- owl:onProperty ] ;
- skos:definition "A container for DataTopics." ;
- linkml:attributes "{}" .
+ skos:inScheme .
a owl:ObjectProperty,
linkml:SlotDefinition ;
rdfs:label "data_topics_collection" ;
rdfs:range ;
- skos:definition "Collection of associated data topics." .
+ skos:definition "Collection of associated data topics." ;
+ skos:inScheme .
a owl:ObjectProperty,
linkml:SlotDefinition ;
@@ -276,79 +231,231 @@ linkml:topValue a owl:DatatypeProperty ;
rdfs:subPropertyOf ;
skos:definition "A relationship between a DataTopic and an anatomical entity." ;
skos:exactMatch ;
- linkml:is_a "related_to" .
-
- a owl:Class,
- linkml:ClassDefinition ;
- rdfs:label "OrganizationContainer" ;
- rdfs:subClassOf [ a owl:Restriction ;
- owl:allValuesFrom ;
- owl:onProperty ] ;
- skos:definition "A container for Organizations." ;
- linkml:attributes "{}" .
+ skos:inScheme .
a owl:ObjectProperty,
linkml:SlotDefinition ;
rdfs:label "organizations" ;
rdfs:range ;
- skos:definition "Collection of associated organizations." .
-
- a owl:ObjectProperty,
- linkml:SlotDefinition ;
- rdfs:label "ror_id" ;
- rdfs:range ;
- skos:definition "Unique ROR identifier." .
-
- a owl:ObjectProperty,
- linkml:SlotDefinition ;
- rdfs:label "wikidata_id" ;
- rdfs:range ;
- skos:definition "Unique Wikidata identifier." .
-
- a owl:ObjectProperty,
- linkml:SlotDefinition ;
- rdfs:label "category" ;
- rdfs:domain ;
- rdfs:range ;
- rdfs:subPropertyOf ;
- skos:definition "Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the entity type class, e.g., \"BiomedicalStandard\"." ;
- linkml:is_a "type" .
-
- a owl:ObjectProperty,
- linkml:SlotDefinition ;
- rdfs:label "contribution_date" ;
- rdfs:domain ;
- rdfs:range linkml:Date ;
- rdfs:subPropertyOf ;
- skos:definition "The date on which the node was added." ;
- linkml:is_a "node_property" .
+ skos:definition "Collection of associated organizations." ;
+ skos:inScheme .
- a owl:ObjectProperty,
- linkml:SlotDefinition ;
- rdfs:label "contributor_github_name" ;
- rdfs:domain ;
- rdfs:range linkml:String ;
- rdfs:subPropertyOf ;
- skos:definition "The name of the github user who added this node." ;
- linkml:is_a "node_property" .
+ a owl:Class,
+ linkml:TypeDefinition ;
+ rdfs:subClassOf linkml:Uriorcurie .
- a owl:ObjectProperty,
- linkml:SlotDefinition ;
- rdfs:label "contributor_name" ;
- rdfs:domain ;
- rdfs:range linkml:String ;
- rdfs:subPropertyOf ;
- skos:definition "The name of the person who added this node." ;
- linkml:is_a "node_property" .
+ a owl:Class,
+ linkml:TypeDefinition ;
+ rdfs:subClassOf linkml:Uriorcurie .
- a owl:ObjectProperty,
- linkml:SlotDefinition ;
- rdfs:label "contributor_orcid" ;
- rdfs:domain ;
- rdfs:range linkml:Uriorcurie ;
- rdfs:subPropertyOf ;
- skos:definition "The ORCiD of the person who added this node." ;
- linkml:is_a "node_property" .
+ a owl:Class,
+ ;
+ rdfs:label "audiovisual" ;
+ rdfs:subClassOf .
+
+ a owl:Class,
+ ;
+ rdfs:label "clinicaldata" ;
+ rdfs:subClassOf .
+
+ a owl:Class,
+ ;
+ rdfs:label "cloudplatform" ;
+ rdfs:subClassOf .
+
+ a owl:Class,
+ ;
+ rdfs:label "cloudservice" ;
+ rdfs:subClassOf .
+
+ a owl:Class,
+ ;
+ rdfs:label "codesystem" ;
+ rdfs:subClassOf .
+
+ a owl:Class,
+ ;
+ rdfs:label "datamodel" ;
+ rdfs:subClassOf .
+
+ a owl:Class,
+ ;
+ rdfs:label "dataregistry" ;
+ rdfs:subClassOf .
+
+ a owl:Class,
+ ;
+ rdfs:label "datasheets" ;
+ rdfs:subClassOf .
+
+ a owl:Class,
+ ;
+ rdfs:label "datavisualization" ;
+ rdfs:subClassOf .
+
+ a owl:Class,
+ ;
+ rdfs:label "deprecated" ;
+ rdfs:subClassOf .
+
+