From 86f5f3ef82a44cab0efd5ca03c05f77f57f168ea Mon Sep 17 00:00:00 2001 From: Bill Little Date: Sun, 7 Jan 2024 22:16:23 +0000 Subject: [PATCH 1/5] unpin pyvista (#622) --- requirements/geovista.yml | 2 +- requirements/pypi-core.txt | 2 +- 2 files changed, 2 insertions(+), 2 deletions(-) diff --git a/requirements/geovista.yml b/requirements/geovista.yml index 810a1860..aafb7bbe 100644 --- a/requirements/geovista.yml +++ b/requirements/geovista.yml @@ -18,7 +18,7 @@ dependencies: - pooch - pykdtree - pyproj >=3.3 - - pyvista >=0.40 + - pyvista >=0.43.1 # pantry dependencies - netcdf4 diff --git a/requirements/pypi-core.txt b/requirements/pypi-core.txt index 8064abc1..0e486a90 100644 --- a/requirements/pypi-core.txt +++ b/requirements/pypi-core.txt @@ -8,4 +8,4 @@ platformdirs pooch pykdtree pyproj>=3.3 -pyvista>=0.40 +pyvista>=0.43.1 From fafa61ebc6a5fa04f2cc7382093c4af20229207b Mon Sep 17 00:00:00 2001 From: "geovista-ci[bot]" <107773241+geovista-ci[bot]@users.noreply.github.com> Date: Tue, 9 Jan 2024 21:39:23 +0000 Subject: [PATCH 2/5] updated conda lock files (#623) Co-authored-by: bjlittle --- requirements/locks/py310-lock-linux-64.txt | 344 ++++++++++---------- requirements/locks/py311-lock-linux-64.txt | 343 ++++++++++---------- requirements/locks/py39-lock-linux-64.txt | 346 ++++++++++----------- 3 files changed, 510 insertions(+), 523 deletions(-) diff --git a/requirements/locks/py310-lock-linux-64.txt b/requirements/locks/py310-lock-linux-64.txt index 2618bfcf..d99ddbc7 100644 --- a/requirements/locks/py310-lock-linux-64.txt +++ b/requirements/locks/py310-lock-linux-64.txt @@ -1,52 +1,52 @@ # Generated by conda-lock. # platform: linux-64 -# input_hash: 00814467d81802ced9a43700ef3cb0198b212c75731dc1a25acb362d6f6cc27f +# input_hash: a17aa2b0198aa34f43dac61151c5c7618f7e7512c7ab81709ac327c823b4d6df @EXPLICIT https://conda.anaconda.org/conda-forge/linux-64/_libgcc_mutex-0.1-conda_forge.tar.bz2#d7c89558ba9fa0495403155b64376d81 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+https://conda.anaconda.org/conda-forge/noarch/pydata-sphinx-theme-0.15.1-pyhd8ed1ab_0.conda#0fabe529030c483e4d9eb885667ce47f https://conda.anaconda.org/conda-forge/noarch/sphinx-copybutton-0.5.2-pyhd8ed1ab_0.conda#ac832cc43adc79118cf6e23f1f9b8995 https://conda.anaconda.org/conda-forge/noarch/sphinxcontrib-applehelp-1.0.7-pyhd8ed1ab_0.conda#aebfabcb60c33a89c1f9290cab49bc93 https://conda.anaconda.org/conda-forge/noarch/sphinxcontrib-devhelp-1.0.5-pyhd8ed1ab_0.conda#ebf08f5184d8eaa486697bc060031953 From 1260eecef52e40cb74f55eeb0c277470eed7431e Mon Sep 17 00:00:00 2001 From: Bill Little Date: Tue, 9 Jan 2024 22:06:20 +0000 Subject: [PATCH 3/5] plane direction + rotate-x fix for #447 (#629) --- src/geovista/filters.py | 6 +++++- 1 file changed, 5 insertions(+), 1 deletion(-) diff --git a/src/geovista/filters.py b/src/geovista/filters.py index b04bd728..3a9e9a39 100644 --- a/src/geovista/filters.py +++ b/src/geovista/filters.py @@ -111,14 +111,18 @@ def remesh( if not triangulated(poly0): poly0.triangulate(inplace=True) + # Ensure to explicitly use default direction=(0, 0, 1) for + # the plane with a post x-axis rotation of 90 degrees. + # See https://github.com/bjlittle/geovista/issues/447 poly1 = pv.Plane( center=(radius / 2, 0, 0), i_resolution=1, j_resolution=1, i_size=radius, j_size=radius * 2, - direction=(0, 1, 0), + direction=(0, 0, 1), ) + poly1.rotate_x(90, inplace=True) poly1.rotate_z(meridian, inplace=True) poly1.triangulate(inplace=True) From ec80db68cb817ae326db4fc980f99017efc3d92f Mon Sep 17 00:00:00 2001 From: Bill Little Date: Tue, 9 Jan 2024 22:25:48 +0000 Subject: [PATCH 4/5] fix active_t_coords deprecation (#630) --- src/geovista/core.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/src/geovista/core.py b/src/geovista/core.py index c87b3336..a4bc7349 100644 --- a/src/geovista/core.py +++ b/src/geovista/core.py @@ -305,7 +305,7 @@ def add_texture_coords( u_coord = (lons + 180) / 360 v_coord = (lats + 90) / 180 t_coord = np.vstack([u_coord, v_coord]).T - mesh.active_t_coords = t_coord + mesh.active_texture_coordinates = t_coord return mesh From 484f306e7544622edea5f6f56065269f1a1e2d46 Mon Sep 17 00:00:00 2001 From: Bill Little Date: Tue, 9 Jan 2024 23:18:47 +0000 Subject: [PATCH 5/5] fix n_faces deprecation (#631) --- src/geovista/common.py | 2 +- src/geovista/core.py | 18 +++++++++--------- tests/bridge/test_from_points.py | 2 +- 3 files changed, 11 insertions(+), 11 deletions(-) diff --git a/src/geovista/common.py b/src/geovista/common.py index ec3eb457..499c0e9f 100644 --- a/src/geovista/common.py +++ b/src/geovista/common.py @@ -551,7 +551,7 @@ def point_cloud(mesh: pv.PolyData) -> bool: .. versionadded:: 0.2.0 """ - return (mesh.n_points == mesh.n_faces) and (mesh.n_lines == 0) + return (mesh.n_points == mesh.n_cells) and (mesh.n_lines == 0) def sanitize_data( diff --git a/src/geovista/core.py b/src/geovista/core.py index a4bc7349..735e0c79 100644 --- a/src/geovista/core.py +++ b/src/geovista/core.py @@ -317,10 +317,10 @@ def combine( ) -> pv.PolyData: """Combine two or more meshes into one mesh. - Only meshes with faces will be combined. Support is not yet provided for combining + Only meshes with cells will be combined. Support is not yet provided for combining meshes that consist of only points or lines. - Note that, no check is performed to ensure that mesh faces do not overlap. + Note that, no check is performed to ensure that mesh cells do not overlap. However, meshes may share coincident points. Coincident point data from the first input mesh will overwrite all other mesh data sharing the same coincident point in the resultant mesh. @@ -334,7 +334,7 @@ def combine( the resultant mesh. clean : bool, default=False Specify whether to merge duplicate points, remove unused points, - and/or remove degenerate faces in the resultant mesh. + and/or remove degenerate cells in the resultant mesh. Returns ------- @@ -376,15 +376,15 @@ def combine( if mesh.n_lines: emsg = ( - f"Can only combine meshes with faces, input mesh #{i+1} " + f"Can only combine meshes with cells, input mesh #{i+1} " "contains lines." ) raise TypeError(emsg) - if mesh.n_faces == 0: + if mesh.n_cells == 0: emsg = ( - f"Can only combine meshes with faces, input mesh #{i+1} " - "has no faces." + f"Can only combine meshes with cells, input mesh #{i+1} " + "has no cells." ) raise TypeError(emsg) @@ -405,9 +405,9 @@ def combine( faces[faces_n_offset[:-1]] = faces_n combined_faces.append(faces) - # accumulate running totals of combined mesh points and faces + # accumulate running totals of combined mesh points and cells n_points += mesh.n_points - n_faces += mesh.n_faces + n_faces += mesh.n_cells if data: # perform intersection to determine common names diff --git a/tests/bridge/test_from_points.py b/tests/bridge/test_from_points.py index 3b878a8c..1551a761 100644 --- a/tests/bridge/test_from_points.py +++ b/tests/bridge/test_from_points.py @@ -17,7 +17,7 @@ def test_defaults(lam_uk_sample, wgs84_wkt): assert result[GV_FIELD_CRS] == wgs84_wkt assert np.isclose(result[GV_FIELD_RADIUS], RADIUS) assert result.n_points == lons.size - assert result.n_points == result.n_faces + assert result.n_points == result.n_cells def test_to_cartesian_kwarg_pass_thru(mocker, lam_uk_sample):