diff --git a/README.md b/README.md index 599e565..de84e39 100644 --- a/README.md +++ b/README.md @@ -9,17 +9,12 @@ Tooling for connecting GitLab, pipelines, and SODAR at CUBI. ## Getting Started -Prerequisites when using conda: +Clone CUBI-TK, create a conda environment (containing `hashdeep`) and install using [`uv`](https://docs.astral.sh/uv/). ```bash +$ git clone git@github.com:bihealth/cubi-tk.git $ conda env create -n cubi-tk -f environment.yaml $ conda activate cubi-tk -``` - -Clone CUBI-TK and install. - -```bash -$ git clone git@github.com:bihealth/cubi-tk.git $ cd cubi-tk $ uv python pin 3.12 $ uv sync diff --git a/docs_manual/installation.rst b/docs_manual/installation.rst index 04fcdb2..34784c6 100644 --- a/docs_manual/installation.rst +++ b/docs_manual/installation.rst @@ -4,18 +4,13 @@ Installation ============ -Prerequisites when using conda: +Clone CUBI-TK, create a conda environment (containing `hashdeep`) and install using [`uv`](https://docs.astral.sh/uv/). .. code-block:: bash + $ git clone git@github.com:bihealth/cubi-tk.git $ conda env create -n cubi-tk -f environment.yaml $ conda activate cubi-tk - -Clone CUBI-TK and install: - -.. code-block:: bash - - $ git clone git@github.com:bihealth/cubi-tk.git $ cd cubi-tk $ uv python pin 3.12 $ uv sync