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memory multiplier of input #186

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jdkent opened this issue Dec 2, 2024 · 1 comment
Open

memory multiplier of input #186

jdkent opened this issue Dec 2, 2024 · 1 comment
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@jdkent
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jdkent commented Dec 2, 2024

I'm curious what the peak memory consumption for an input file is. If a bold file is 1gb, will the peak memory being 2gb/5gb/10g? Are there large variables being held in memory longer than they need to be?

@htwangtw
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This is a great question and I would consider this an upstream issue in nilearn.
See this relevant issue on memory profiling of masker: nilearn/nilearn#3399
The memory consumption will depend on

  1. size of input file
  2. atlas type (segregated or probability)
  3. did the masker object performs resampling

I consider this an upstream issue, as the current software depends on the nilearn masker object

@htwangtw htwangtw added the upstream Known upstrean issues label Jan 28, 2025
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