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Minimal freesurfer image #65

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commandercool opened this issue Oct 3, 2020 · 1 comment
Open

Minimal freesurfer image #65

commandercool opened this issue Oct 3, 2020 · 1 comment
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@PeerHerholz
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enhancement help wanted question

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@commandercool
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Hello together!

Some time ago I've created a minimal freesurfer image that is based on freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0 and is able to run recon-all.
It is only 732.6 MB compressed and 1.93GB when pulled.

I've figured you might be interested using it as a base in order to make your image a little smaller.

Here is it: https://hub.docker.com/r/alerokhin/freesurfer6
@PeerHerholz
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Ahoi hoi @commandercool,

thanks so much for the pointer, that sounds fantastic! Did you test any other FreeSurfer functions/pipelines as well?
Tagging @Shotgunosine to maybe discuss if we can/should incorporate this somehow!?

@PeerHerholz PeerHerholz self-assigned this Oct 16, 2020
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