Main tool : fastp
Full documentation: https://github.com/OpenGene/fastp
A tool designed to provide fast all-in-one preprocessing for FastQ files.
fastp -i SRR13957123_1.fastq.gz -I SRR13957123_2.fastq.gz -o SRR13957123_PE1.fastq.gz -O SRR13957123_PE2.fastq.gz -h SRR13957123_fastp.html -j SRR13957123_fastp.json