From 4a0840b36d244297e976e8be165994c45d9e60f5 Mon Sep 17 00:00:00 2001 From: Tim Date: Mon, 11 Dec 2023 21:05:24 -0800 Subject: [PATCH] Update tutorials no gitpod (#425) * removed gitpod references from tutorials * fixed typos --- tutorials/000_introduction_test.go | 2 +- tutorials/001_input_output_test.go | 4 ++-- tutorials/README.md | 2 +- 3 files changed, 4 insertions(+), 4 deletions(-) diff --git a/tutorials/000_introduction_test.go b/tutorials/000_introduction_test.go index 1234a4460..6eee0f87f 100644 --- a/tutorials/000_introduction_test.go +++ b/tutorials/000_introduction_test.go @@ -10,7 +10,7 @@ real, live, running examples that you can modify and play with. Heck, it may be the first "book" on computational synthetic biology period as far as I know. It feels strange for me to be the first author to write this sort of thing for -a field that's already been around for 20 ~years but here I am. +a field that's already been around for ~20 years but here I am. When I first entered the field there wasn't anything even close to resembling a software framework for engineering organisms and even today Poly (the library diff --git a/tutorials/001_input_output_test.go b/tutorials/001_input_output_test.go index e205c1bf8..3c456b135 100644 --- a/tutorials/001_input_output_test.go +++ b/tutorials/001_input_output_test.go @@ -25,7 +25,7 @@ The bane of the bioinformatician's existence are the blasted file formats that have been foisted upon us by our predecessors. Most are hard to understand and even harder to parse programmatically. -My least favorite is the most common format for annotated sequence. The Genbank +My least favorite is the most common format for annotated sequences. The Genbank format. Made by some secret council of jerks in the deserts of New Mexico sometime in @@ -40,7 +40,7 @@ I've written about many times in many other places. Point is. To start you're going to need to get data in and out of your computer and Poly makes it easy. Follow along below and run each test through the -included debugger via gitpod if you really want to know what's going on. +included debugger via VScode if you really want to know what's going on. TTFN, Tim diff --git a/tutorials/README.md b/tutorials/README.md index 589c31c3c..9ae2af61b 100644 --- a/tutorials/README.md +++ b/tutorials/README.md @@ -1,5 +1,5 @@ # Poly Tutorials -This directory holds a set of always up to date tutorials for Poly that be run can run, edited, and explored in the browser via this [gitpod deployment](https://gitpod.io/#tutorial=true/https://github.com/bebop/poly) +This directory holds a set of always up to date tutorials for Poly that be run can run, edited, and explored as tests in VScode or your favorite editor/debugger. Many tutorials in this directory haven't been started yet. Please feel free to write one and add it to our main repo via pull request! \ No newline at end of file