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Can straglr benchmark HG002? #57

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HongyuanChu opened this issue Dec 26, 2024 · 3 comments
Open

Can straglr benchmark HG002? #57

HongyuanChu opened this issue Dec 26, 2024 · 3 comments

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@HongyuanChu
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https://ftp-trace.ncbi.nlm.nih.gov/ReferenceSamples/giab/release/AshkenazimTrio/HG002_NA24385_son/TandemRepeats_v1.0/GRCh38/
Recently, Giab published this TR for benchmark.
Maybe Straglr could kindly provide ways to benchmark using this? Or relevant result?

@HongyuanChu
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Thanks for developing this useful tool

@readmanchiu
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Thanks for you interest in Straglr and pointing me to this useful resource
I will have to take a look and figure out to either perform the benchmarking or a way to do the benchmark using this as you suggest.
But thank you anyways.

@HongyuanChu
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Thanks for you interest in Straglr and pointing me to this useful resource I will have to take a look and figure out to either perform the benchmarking or a way to do the benchmark using this as you suggest. But thank you anyways.

Thank you for reply!

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