diff --git a/mri_concatenate_gcam/testdata.tar.gz b/mri_concatenate_gcam/testdata.tar.gz index f9147fa2ef4..97b1a2cd74c 120000 --- a/mri_concatenate_gcam/testdata.tar.gz +++ b/mri_concatenate_gcam/testdata.tar.gz @@ -1 +1 @@ -../.git/annex/objects/1G/4z/SHA256E-s740258001--4017bf27fc78182b7837c6bd0605fa9aefa5c63dc640d156178d3c798cff5fa3.tar.gz/SHA256E-s740258001--4017bf27fc78182b7837c6bd0605fa9aefa5c63dc640d156178d3c798cff5fa3.tar.gz \ No newline at end of file +../.git/annex/objects/Wm/XZ/SHA256E-s4766529--88f506c9f95313ab0bc36ff3ae95ad17ea509fa0914370bbd54c2a1ce2388c25.tar.gz/SHA256E-s4766529--88f506c9f95313ab0bc36ff3ae95ad17ea509fa0914370bbd54c2a1ce2388c25.tar.gz \ No newline at end of file diff --git a/mri_mask/test.sh b/mri_mask/test.sh index 4c9cdadc21d..534a7a6b40a 100755 --- a/mri_mask/test.sh +++ b/mri_mask/test.sh @@ -1,6 +1,10 @@ #!/usr/bin/env bash source "$(dirname $0)/../test.sh" +# untaring and taring the large gcam data is time consuming, +# so don't remove output before each test +FSTEST_NO_DATA_RESET=1 && init_testdata + # apply mask test_command mri_mask nu.1.mgz brainmask.1.mgz mask.mgz compare_vol mask.mgz mask.ref.mgz diff --git a/mri_mask/testdata.tar.gz b/mri_mask/testdata.tar.gz index 1fecc1ac0b4..9d651be3f45 120000 --- a/mri_mask/testdata.tar.gz +++ b/mri_mask/testdata.tar.gz @@ -1 +1 @@ -../.git/annex/objects/65/48/SHA256E-s304741483--875392babb590d1b22c322c8d1038c1f9f7b35468548056c087a1ff7ca677a51.tar.gz/SHA256E-s304741483--875392babb590d1b22c322c8d1038c1f9f7b35468548056c087a1ff7ca677a51.tar.gz \ No newline at end of file +../.git/annex/objects/kz/G7/SHA256E-s2437558--c67fee1d1c93954ae739b56a0cdf39253075b3c94e75e29813803400ebec3ccd.tar.gz/SHA256E-s2437558--c67fee1d1c93954ae739b56a0cdf39253075b3c94e75e29813803400ebec3ccd.tar.gz \ No newline at end of file diff --git a/mris_transform/test.sh b/mris_transform/test.sh index ac6a1404c67..544d2e1c38d 100755 --- a/mris_transform/test.sh +++ b/mris_transform/test.sh @@ -1,6 +1,9 @@ #!/usr/bin/env bash source "$(dirname $0)/../test.sh" +# untaring is time consuming, so don't remove output before each test +FSTEST_NO_DATA_RESET=1 && init_testdata + # transform surface with LTA test_command mris_transform lh.1.pial 1_to_2.lta lh.out.pial compare_surf lh.out.pial lh.ref.pial @@ -19,12 +22,12 @@ compare_surf lh.out.pial lh.ref.pial # transform surface with GCAM test_command mris_transform --trx-dst nu.2.mgz lh.1.pial 1_to_2.m3z lh.out.pial -compare_surf lh.out.pial lh.ref.pial +compare_surf lh.out.pial lh.ref.gcam.pial # transform surface with inverse GCAM test_command mris_transform --trx-dst nu.1.mgz --is-inverse lh.1.pial 2_to_1.m3z lh.out.pial -compare_surf lh.out.pial lh.ref.pial +compare_surf lh.out.pial lh.ref.gcam.inv.pial # just copy surface test_command mris_transform lh.1.pial identity.nofile lh.out.pial -compare_surf lh.out.pial lh.1.pial \ No newline at end of file +compare_surf lh.out.pial lh.1.pial diff --git a/mris_transform/testdata.tar.gz b/mris_transform/testdata.tar.gz index 6b2d540c12c..442893bab72 120000 --- a/mris_transform/testdata.tar.gz +++ b/mris_transform/testdata.tar.gz @@ -1 +1 @@ -../.git/annex/objects/5j/Xj/SHA256E-s489363347--27c6cf0c8c404238b024cc00ae8b50832d10f14dbbd86f6bb85d831c8646cfb0.tar.gz/SHA256E-s489363347--27c6cf0c8c404238b024cc00ae8b50832d10f14dbbd86f6bb85d831c8646cfb0.tar.gz \ No newline at end of file +../.git/annex/objects/03/0W/SHA256E-s2717097--b4d70a9294a2b5b21354ce20f24177671214fc3d56d6d02163f11a2d522904d8.tar.gz/SHA256E-s2717097--b4d70a9294a2b5b21354ce20f24177671214fc3d56d6d02163f11a2d522904d8.tar.gz \ No newline at end of file