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GrapeTree Clustering #89

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jimmyliu1326 opened this issue May 20, 2020 · 0 comments
Open

GrapeTree Clustering #89

jimmyliu1326 opened this issue May 20, 2020 · 0 comments

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@jimmyliu1326
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I would like to cluster my isolates across a range of different threshold cutoffs and visualize the cluster assignments in GrapeTree. However, to ensure consistency between my cluster assignments and GrapeTree visualization at the same threshold cutoff, I need to cluster my isolates the same way as GrapeTree. Is there a script that parallels GrapeTree's clustering algorithm?
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