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rpy2 is causing more and more issues -> no GLMM #161

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paulmueller opened this issue May 17, 2024 · 0 comments
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rpy2 is causing more and more issues -> no GLMM #161

paulmueller opened this issue May 17, 2024 · 0 comments
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refactoring No functional changes, just cleanup

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@paulmueller
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paulmueller commented May 17, 2024 •
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Currently the build pipeline is failing for Windows because of incompatibilities with rpy2. As a result, generalized linear mixed effects model analysis will not be available. The current plan is to

  1. Remove rpy2 from the Windows build pipeline, effectively disabling the functionality for Shape-Out version
  2. Write a wrapper script for R to replace rpy2. The resulting analysis will be slower and require more RAM, but it will be more robust than the current solution.

See also #73
See also #98
@paulmueller paulmueller added the refactoring No functional changes, just cleanup label May 17, 2024
@paulmueller paulmueller pinned this issue May 17, 2024
paulmueller added a commit that referenced this issue May 17, 2024
@paulmueller
ci: remove rpy2 from build pipeline (#161)
876ef72
paulmueller added a commit that referenced this issue May 17, 2024
@paulmueller
setup: remove rpy2 from dependencie (#161)
2bfdef6
@paulmueller paulmueller unpinned this issue Oct 22, 2024
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