ShapeOut 0.8.8

• Bugfixes:
  • "Mean of empty slice" error when attempting to plot bad data
• New ancillary features in expert mode:
  • Principal inertia ratio (dclab 0.6.3.dev1)
  • Absolute tilt of raw contour (dclab 0.6.3.dev2)
• Add computation of Young's modulus for water medium (dclab 0.6.3.dev14)
• Show fluorescence metadata in Information tab
• Display data paths as tool tip in title editor (Contour Plot tab) (#227)

ShapeOut 0.8.7

• Bugfixes:
  • Search for missing datasets was falsely extended to directories
    not chosen by the user
  • Add recording date/time tooltip in the analysis tab to avoid
    ambiguities (#223)
  • Allow arbitrary number of repetitions for mixed model analysis
    with a spin control (#222)
  • Setting the treatment to "None" for (g)lmm analysis did not
    exclude it from the analysis, but introduced it as a different
    treatment (#224)
  • Channel width not correctly identified for old tdms files
    (dclab 0.6.2.dev7)
  • Do not draw isoelastics in contour plot if measurements have
    different channel widths
• Automatically identify treatment and repetition for mixed model
  analysis (#222)
• Automated release to PyPI with appveyor
• Begin migration of docs to sphinx/readthedocs.org

ShapeOut 0.8.6

• Refactoring:
  • Use pathlib instead of os.path for
    • All session handling/conversion tasks
    • Configuration file management
    • Measurement/Analysis management
  • Support all changes to dclab.definitions (dclab 0.4.0)
  • Support all changes to dclab.features (dclab 0.5.0)
• Bugfixes:
  • Opening sessions containing paths to data with a hash "#" failed
  • AttributeError during autosave when no measurement data is available
  • Exporting to .fcs files failed due to NaN-valued events; Events
    containing NaN values are now ignored (fcswrite 0.1.3.dev22) (#215)
  • Improve displayed float values for selected configuration keys (#216)
  • Unicode error when searching for data sets on disk (#218)
  • Unicode error when performing LMM analysis on some setups (#217)
  • IndexError when obtaining meta data from previous, broken analysis
  • KeyError when starting a new analysis with unavailable plotting axes
  • Ignore broken .rtdc data files

ShapeOut 0.8.5

• Update plotting range when switching to log scale (#198)
• Allow to fix plotting range to retain previous behavior (#198)
• Initial plotting range is determined from min/max values of all plots (#213)
• Improved standard contour and kde accuracies using Doane's formula (#147)
• Bugfixes:
  • Support opening tdms files with capitalized "userDef" column names
    (dclab dclab 0.3.2.dev5) (#212)
  • Wx colors and chaco not compatible anymore (Windows appveyor build)
• Refactoring:
  • Use pathlib when saving and opening sessions and do not use os.chdir

ShapeOut 0.8.4

• Add pixelation-corrected numerical and analytical isoelastics (#203)
• Update emodulus look-up table (dclab 0.3.1.dev3) (#202)
• Improved handling of polygon filters (partly #95)
• Updated R version to 3.2.5 due to build errors
• Bugfixes:
  • Young's modulus computation is wrong due to faulty FEM
    simulations (dclab 0.3.1.dev20) (#207)
  • Image/trace panel shows wrong event when the mouse pointer hovers
    from one scatter plot to another
  • Hierarchy children: image, contour, and trace data were not
    displayed in the image/trace panel (dclab 0.3.1.dev1) (#100)
  • Hierarchy children did not support manual filters (dclab 0.3.1.dev2)
  • Regression: Setting plotting range manually not possible (#201)
  • Pixel size not read from tdms-based data (dclab 0.3.1.dev13) (#205)
  • "limit events" filter must be integer not boolean
    (dclab 0.3.2.dev3) (#210)

ShapeOut 0.8.3

• Prefer sample name from para.ini over data folder name (dclab 0.3.0.dev15)
• Support new .rtdc file format (dclab 0.3.0.dev20) (#151)
• Bugfixes:
  • Automatically fix inverted plotting range
  • Enable scrolling in data export dialogs
  • Ignore missing features during data export
  • Plotting circularity with isoelastics failed (dclab 0.3.0.dev21) (#197)
  • Plotting errors with log-scale axes (#194, #195)
  • SHIFT+ENTER shortcut did not update filters
  • Fixed memory leak (#187)

ShapeOut 0.8.2

• Add fluorescence crosstalk correction (#185)
• Bugfixes:
  • Regression: Session autosaving broken (#191)
  • Young's modulus not updated (dclab 0.2.9.dev9) (#190)
  • UnicodeDecodeError on fcs-export (fcswrite 0.1.3.dev15) (#189)
  • Mouse cursor stuck in wait when plotting hierarchy data (#188)
• Code cleanup:
  • Use the term "feature" consistently (dclab 0.2.9.dev2)
  • Use file format agnostic fluorescence trace keys (dclab 0.2.9.dev4)

ShapeOut 0.8.1

• Update internal configuration parameter names (dclab 0.2.8)
• Cache event counts of tdms-based data sets on disk (#179)
• Bugfixes:
  • KeyError when isoelastics not defined for combination of axes (#177)
  • Wrong channel width when loading ShapeIn 2.0.1 tdms data (dclab 0.2.9)

ShapeOut 0.8.0

• Remember directory for searching missing measurement data
• Bugfixes:
  • Cannot open old session files with hierarchies when the measurement
    data location has changed (#174)
  • Cannot open polygon filters exported with ShapeOut versions < 0.7.6 (#174)
• Code cleanup:
  • Move program-relevant data to "shapeout" directory
  • Move computation of isoelastics to dclab (dclab 0.2.6.dev23)
  • Create separate directory for appveyor recipe
  • Remove unused/incomplete support for internationalization

ShapeOut 0.7.9

• Add on-the-fly computation of contour inertia ratios
• Add menu options to save current event image (#164)
• Bugfix: Isoelastics are not shown (#145)