diff --git a/wspec/models.wrm.annot b/wspec/models.wrm.annot index 48d14404d..49899af02 100644 --- a/wspec/models.wrm.annot +++ b/wspec/models.wrm.annot @@ -347,9 +347,9 @@ Disease_relevance ?Text ^note ?Species #Evidence Modifies_disease ?DO_term INXREF Disease_modifier_gene //New tag WS278 Models_disease_in_annotation ?Disease_model_annotation INXREF Disease_relevant_gene //New tag WS278 - Modifies_disease_in_annotation ?Disease_model_annotation INXREF Modifier_gene //New tag WS278 - Models_disease_asserted ?Disease_model_annotation INXREF Asserted_gene // Indicates the gene the disease affects // new tag request for WS287 - Models_disease_inferred ?Disease_model_annotation INXREF Inferred_gene // Indicates the gene the disease affects // new tag request for WS287 + Modifies_disease_in_annotation ?Disease_model_annotation INXREF Modifier_gene //New tag WS278 + Models_disease_asserted ?Disease_model_annotation INXREF Asserted_gene //New tag WS287 + Models_disease_inferred ?Disease_model_annotation INXREF Inferred_gene //New tag WS287 Molecular_info Corresponding_CDS ?CDS OUTXREF Gene #Evidence // to link to live CDSs Corresponding_CDS_history ?CDS OUTXREF Gene_history // to link to history CDSs Corresponding_transcript ?Transcript OUTXREF Gene #Evidence @@ -1114,11 +1114,9 @@ Disease_relevant_gene ^modeled-by-disease-relevant-gene UNIQUE ?Gene OUTXREF Models_disease_in_annotation ?Text Genotype ^modeled-by-genotype UNIQUE ?Genotype OUTXREF Models_disease_in_annotation //to associate genotypes Modeled_by_remark UNIQUE ?Text - Asserted_gene ?Gene OUTXREF // Indicates // new tag request for WS287 - Inferred_gene ?Gene OUTXREF // Indicates the gene in Variation or Strain, when submitted // new tag request for WS287 - Asserted_variation ?Variation OUTXREF Disease_model_annotation // request for WS287 - - Inferred_gene ?Gene OUTXREF Disease_model_annotation + Asserted_gene ?Gene OUTXREF Models_disease_asserted // Indicates the gene in Variation or Strain when submitted, new tag request for WS287 + Inferred_gene ?Gene OUTXREF Models_disease_inferred // Indicates the gene in Variation or Strain when submitted, new tag request for WS287 + Asserted_variation ?Variation OUTXREF Models_variation_asserted // Indicates asserted Variation when submitted, new tag request for WS287 Association_type UNIQUE is_model_of is_implicated_in is_marker_for @@ -2270,7 +2268,7 @@ URL UNIQUE Text // Link to database home page Email Text // Contact email URL_constructor UNIQUE Text // rule to build URL to specific database entry page - Database_type Text // Type or category of database WS287 + Database_type Text // Type or category of db WS287 /////////////////////////////////////////////////////////////////////////////////////////// // @@ -3691,10 +3689,10 @@ Phenotype_remark ?Text #Evidence Phenotype_not_observed ?Phenotype OUTXREF Not_in_Variation #Phenotype_info //added by Wen to separate Not phenotype from real phenotypes Disease_info Models_disease ?DO_term INXREF Disease_model_variation - Modifies_disease ?DO_term INXREF Disease_modifier_variation //New tag WS278 - Models_disease_in_annotation ?Disease_model_annotation INXREF Variation //New tag WS278 - Modifies_disease_in_annotation ?Disease_model_annotation INXREF Modifier_variation //New tag WS278 - Modifies_disease_asserted_variation ?Disease_model_annotation INXREF Asserted_variation // request for WS287 + Modifies_disease ?DO_term INXREF Disease_modifier_variation //New tag + Models_disease_in_annotation ?Disease_model_annotation INXREF Variation //New tag + Modifies_disease_in_annotation ?Disease_model_annotation INXREF Modifier_variation //New tag + Models_variation_asserted ?Disease_model_annotation INXREF Asserted_variation // request for WS287 Reference ?Paper OUTXREF Allele Remark ?Text #Evidence // Method UNIQUE ?Method // Becomes :locatable/method @@ -3984,4 +3982,4 @@ // Add a line for the WS release the models file is going to be GIT tagged for // This give you a final shot at creating a nicely formatted GIT commit message // -// WS286 +// WS287