From 0b31bc915160c472f8ee32da2981cff7a0ceadc7 Mon Sep 17 00:00:00 2001
From: Paul-Davis <pad@ebi.ac.uk>
Date: Tue, 9 Feb 2016 16:42:17 +0000
Subject: [PATCH] Update to the was that Transcription_factors are connected
with Features as the original only allowed for one feature to be connected
and the model assumed it was binding_site which wasn't true in all cases.
closes #25
---
wspec/models.wrm | 4 ++--
1 file changed, 2 insertions(+), 2 deletions(-)
diff --git a/wspec/models.wrm b/wspec/models.wrm
index f197c8c48..e2e5933ac 100644
--- a/wspec/models.wrm
+++ b/wspec/models.wrm
@@ -1881,8 +1881,8 @@
Associated_with_expression_pattern ?Expr_pattern XREF Associated_feature #Evidence
Associated_with_Feature ?Feature XREF Associated_with_Feature #Evidence
Associated_with_construct ?Construct XREF Sequence_feature
+ Associated_with_transcription_factor ?Transcription_factor XREF Associated_feature #Evidence
Bound_by_product_of ?Gene XREF Gene_product_binds #Evidence //pad added this to show what gene it binds
- Transcription_factor UNIQUE ?Transcription_factor XREF Binding_site
Confidential_remark ?Text //pad
Remark ?Text #Evidence
Method UNIQUE ?Method
@@ -1917,7 +1917,7 @@
Associated_with_gene ?Gene XREF Associated_transcription_factor #Evidence
Type Text #Evidence
Remark Text #Evidence
- Binding_site ?Feature XREF Transcription_factor
+ Associated_feature ?Feature XREF Associated_with_transcription_factor #Evidence
////////////////////////////////////////////////////////////////////////////////////////////
//