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A bad sample in a qiime artifact prevents the other samples from being processed #5

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arivers opened this issue Nov 20, 2018 · 0 comments

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@arivers
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arivers commented Nov 20, 2018

A QIIME2 user reported that when they ran their .qza file through itsxpress they received an error about clustering. What happened was they had a bad fastq file which had no reads after merging. Rather than telling them this and processing the next file, Q2-ITSxpress stopped and passed along the underlying error.

The fix should be to:

  1. provide the user with in formation about what sample failed
  2. continue processing the next sample.
@arivers arivers added enhancement New feature or request and removed enhancement New feature or request labels Dec 12, 2018
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