From 8a5430e50104c076651257285c5a458e55712bca Mon Sep 17 00:00:00 2001 From: nicolesylvester Date: Thu, 1 Aug 2024 15:50:45 -0700 Subject: [PATCH] initial parallel setup --- q2_asap/analyzeAmplicons_pipeline.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/q2_asap/analyzeAmplicons_pipeline.py b/q2_asap/analyzeAmplicons_pipeline.py index 235f091..42483a8 100644 --- a/q2_asap/analyzeAmplicons_pipeline.py +++ b/q2_asap/analyzeAmplicons_pipeline.py @@ -23,8 +23,8 @@ def analyzeAmplicons_pipeline(ctx, sequences, ref_sequence, trimmer, aligner, config_file_path=config_fp) results.append(bam_processor_result) - #TODO: is this in pipeline? output_combiner_result, = output_combiner_action(xml_dir=bam_processor_result, run_name=run_name) results.append(output_combiner_result) return tuple(results) +