From 77e57ca2665e3b4611efcbf8f3b911caf4384895 Mon Sep 17 00:00:00 2001
From: Tamas Ungi <ungi.tamas@gmail.com>
Date: Mon, 13 Sep 2021 14:47:55 -0400
Subject: [PATCH] Re #46: Added ultrasound 2D and 3D view
---
LumpNav2/LumpNav2.py | 26 ++++++++++++++++++++++++++
1 file changed, 26 insertions(+)
diff --git a/LumpNav2/LumpNav2.py b/LumpNav2/LumpNav2.py
index 6f59481..54bf200 100644
--- a/LumpNav2/LumpNav2.py
+++ b/LumpNav2/LumpNav2.py
@@ -826,6 +826,31 @@ def setup(self):
self.setupTransformHierarchy()
+ # Show ultrasound in 2D view
+
+ layoutManager = slicer.app.layoutManager()
+ # Show ultrasound in red view.
+ redSlice = layoutManager.sliceWidget('Red')
+ controller = redSlice.sliceController()
+ controller.setSliceVisible(True)
+ redSliceLogic = redSlice.sliceLogic()
+ image_Image = parameterNode.GetNodeReference(self.IMAGE_IMAGE)
+ redSliceLogic.GetSliceCompositeNode().SetBackgroundVolumeID(image_Image.GetID())
+ # Set up volume reslice driver.
+ resliceLogic = slicer.modules.volumereslicedriver.logic()
+ if resliceLogic:
+ redNode = slicer.mrmlScene.GetNodeByID('vtkMRMLSliceNodeRed')
+ # Typically the image is zoomed in, therefore it is faster if the original resolution is used
+ # on the 3D slice (and also we can show the full image and not the shape and size of the 2D view)
+ redNode.SetSliceResolutionMode(slicer.vtkMRMLSliceNode.SliceResolutionMatchVolumes)
+ resliceLogic.SetDriverForSlice(image_Image.GetID(), redNode)
+ resliceLogic.SetModeForSlice(6, redNode) # Transverse mode, default for PLUS ultrasound.
+ resliceLogic.SetFlipForSlice(False, redNode)
+ resliceLogic.SetRotationForSlice(180, redNode)
+ redSliceLogic.FitSliceToAll()
+ else:
+ logging.warning('Logic not found for Volume Reslice Driver')
+
# Create models
createModelsLogic = slicer.modules.createmodels.logic()
@@ -947,6 +972,7 @@ def setupTransformHierarchy(self):
imageImage.CreateDefaultDisplayNodes()
imageArray = np.zeros((512, 512, 1), dtype="uint8")
slicer.util.updateVolumeFromArray(imageImage, imageArray)
+ parameterNode.SetNodeReferenceID(self.IMAGE_IMAGE, imageImage.GetID())
imageImage.SetAndObserveTransformNodeID(imageToTransd.GetID())
def updateImageToTransdFromDepth(self, depthMm):