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Old version of Panadas not getting installed #5

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Sourdoc opened this issue Sep 23, 2024 · 0 comments
Open

Old version of Panadas not getting installed #5

Sourdoc opened this issue Sep 23, 2024 · 0 comments

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@Sourdoc
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Sourdoc commented Sep 23, 2024

Hi,
I am trying to install export2graphlan using pip. I am using virtual machine which already has latest version of pandas (2.2.2) installed. When I am trying to create a python virtual environment and install pandas 0.13.1, it is not detecting the already install version and not allowing me to install 0.13.1 anyway. So I was wondering if you are planning to release a newer version of export2graphlan that supports latest version of pandas. I have installed metaphlan 4.1 which doesn't have export2graphlan so I was also wondering if you are planning to include export2graphlan.py in latest versions of metaphlan.

`pip install export2graphlan
Collecting export2graphlan
Using cached export2graphlan-0.22.tar.gz (14 kB)
Preparing metadata (setup.py) ... done
Collecting pandas==0.13.1
Downloading pandas-0.13.1.zip (6.9 MB)
━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 6.9/6.9 MB 50.1 MB/s eta 0:00:00
Preparing metadata (setup.py) ... done
Requirement already satisfied: python-dateutil>=2 in /apps/python3/3.11.0/lib/python3.11/site-packages (from pandas==0.13.1->export2graphlan) (2.8.2)
Requirement already satisfied: pytz>=2011k in /apps/python3/3.11.0/lib/python3.11/site-packages (from pandas==0.13.1->export2graphlan) (2022.6)
Requirement already satisfied: numpy>=1.7.0b2 in /apps/python3/3.11.0/lib/python3.11/site-packages (from pandas==0.13.1->export2graphlan) (1.23.4)
Requirement already satisfied: six>=1.5 in /apps/python3/3.11.0/lib/python3.11/site-packages (from python-dateutil>=2->pandas==0.13.1->export2graphlan) (1.16.0)
Installing collected packages: pandas, export2graphlan
Attempting uninstall: pandas
Found existing installation: pandas 1.5.1
Not uninstalling pandas at /apps/python3/3.11.0/lib/python3.11/site-packages, outside environment /scratch/fi66/apps/e2g/0.22
Can't uninstall 'pandas'. No files were found to uninstall.
DEPRECATION: pandas is being installed using the legacy 'setup.py install' method, because it does not have a 'pyproject.toml' and the 'wheel' package is not installed. pip 23.1 will enforce this behaviour change. A possible replacement is to enable the '--use-pep517' option. Discussion can be found at pypa/pip#8559
Running setup.py install for pandas ... error
error: subprocess-exited-with-error

× Running setup.py install for pandas did not run successfully.
│ exit code: 1`

Many thanks for your time and I look forward to hearing from you.

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