From 503b21d4088b06e90b9c7c1e61474a7453f9160d Mon Sep 17 00:00:00 2001 From: rxu17 <26471741+rxu17@users.noreply.github.com> Date: Fri, 12 Jan 2024 00:26:43 -0800 Subject: [PATCH] fix tests --- tests/test_process_mutation.py | 3 ++- 1 file changed, 2 insertions(+), 1 deletion(-) diff --git a/tests/test_process_mutation.py b/tests/test_process_mutation.py index 30049cdf..5895dee3 100644 --- a/tests/test_process_mutation.py +++ b/tests/test_process_mutation.py @@ -177,7 +177,7 @@ def test_process_mutation_workflow(syn, genie_config, annotation_paths): syn=syn, center=center, maf_tableid=maf_table_id, - annotated_maf_path=annotation_paths, + annotation_paths=annotation_paths, flatfiles_synid="syn12279903", ) patch_concat_error.assert_called_once_with( @@ -192,6 +192,7 @@ def test_process_mutation_workflow(syn, genie_config, annotation_paths): ) patch_store_error.assert_called_once_with( full_error_report=sample_error_report, + full_error_report_path=annotation_paths.full_error_report_path, syn=syn, errors_folder_synid="syn53239079", )