diff --git a/genie/process_mutation.py b/genie/process_mutation.py index f4aa334d..d6d31d29 100644 --- a/genie/process_mutation.py +++ b/genie/process_mutation.py @@ -202,12 +202,14 @@ def process_mutation_workflow( "syn22053204", ifcollision="overwrite.local", downloadLocation=genie_config["genie_annotation_pkg"], + version=1, #TODO: This should pull from a config file in the future ) # Genome Nexus Jar file syn.get( "syn22084320", ifcollision="overwrite.local", downloadLocation=genie_config["genie_annotation_pkg"], + version=13, #TODO: This should pull from a config file in the future ) annotated_maf_path = annotate_mutation(