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testsuite.yaml
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name: Tests
on: [push, pull_request]
concurrency:
group: ${{ github.workflow }}-${{ github.head_ref || github.run_id }}
cancel-in-progress: true
jobs:
tests:
env:
ENV_NAME: ${{ matrix.env_name }}
PYTHON: ${{ matrix.python-version }}
OS: ${{ matrix.os }}
name: Testing
runs-on: ${{ matrix.os }}
defaults:
run:
# Adding -l {0} helps ensure conda can be found properly.
shell: bash -l {0}
strategy:
fail-fast: false
matrix:
os: [ubuntu-latest, macos-latest]
python-version: ["3.10", "3.11", "3.12"]
env_name: [pyuvsim_tests_openmpi]
include:
- env_name: pyuvsim_tests_mpich
python-version: "3.11"
os: ubuntu-latest
- env_name: pyuvsim_tests_mpich
python-version: "3.11"
os: macos-latest
steps:
- uses: actions/checkout@main
with:
fetch-depth: 0
- name: Setup Miniforge
uses: conda-incubator/setup-miniconda@v3
with:
miniforge-version: latest
python-version: ${{ env.PYTHON }}
environment-file: ci/${{ env.ENV_NAME }}.yaml
activate-environment: ${{ env.ENV_NAME }}
- name: Conda Info
run: |
conda info -a
conda list
PYVER=`python -c "import sys; print('{:d}.{:d}'.format(sys.version_info.major, sys.version_info.minor))"`
if [[ $PYVER != ${{ env.PYTHON }} ]]; then
exit 1;
fi
- name: Install
# calling git right before the install seems to prevent a time-out within setuptools_scm on MacOS
run: |
git describe --tags
git version
SETUPTOOLS_SCM_DEBUG=1 pip install --no-deps .
- name: Run Tests
run: |
python -m pytest -n auto --cov=pyuvsim --cov-config=.coveragerc --cov-report xml:./coverage.xml --junitxml=test-reports/xunit.xml
- name: Upload Coverage
uses: codecov/codecov-action@v4
if: success()
with:
token: ${{secrets.CODECOV_TOKEN}} #required
file: ./coverage.xml #optional
env_vars: OS,PYTHON
fail_ci_if_error: true
# Use pip for diversity
# do this on min_deps because it's hard to get mpi4py to install from pip
min_deps:
env:
PYTHON: "3.11"
name: Min Deps Testing
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@main
with:
fetch-depth: 0
- name: Setup Python
uses: actions/setup-python@v4
with:
python-version: ${{ env.PYTHON }}
# Just install the test requirements, also install pytest-xdist for speed
- name: Install
run: |
pip install -e .[test]
pip install pytest-xdist
- name: Environment Info
run: |
pip list
PYVER=`python -c "import sys; print('{:d}.{:d}'.format(sys.version_info.major, sys.version_info.minor))"`
if [[ $PYVER != ${{ env.PYTHON }} ]]; then
exit 1;
fi
- name: Run Tests
run: |
python -m pytest -n auto --cov=pyuvsim --cov-config=.coveragerc --cov-report xml:./coverage.xml
- uses: codecov/codecov-action@v4
if: success()
with:
token: ${{secrets.CODECOV_TOKEN}} #required
files: ./coverage.xml #optional
min_versions:
env:
ENV_NAME: min_versions
PYTHON: "3.10"
name: Min Versions Testing
defaults:
run:
# Adding -l {0} helps ensure conda can be found properly.
shell: bash -l {0}
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@main
with:
fetch-depth: 0
- name: Setup Miniforge
uses: conda-incubator/setup-miniconda@v3
with:
miniforge-version: latest
python-version: ${{ env.PYTHON }}
environment-file: ci/${{ env.ENV_NAME }}.yaml
activate-environment: ${{ env.ENV_NAME }}
- name: Conda Info
run: |
conda info -a
conda list
PYVER=`python -c "import sys; print('{:d}.{:d}'.format(sys.version_info.major, sys.version_info.minor))"`
if [[ $PYVER != ${{ env.PYTHON }} ]]; then
exit 1;
fi
- name: Install
run: |
pip install --no-deps .
- name: Run Tests
run: |
python -m pytest -n auto --cov=pyuvsim --cov-config=.coveragerc --cov-report xml:./coverage.xml --junitxml=test-reports/xunit.xml
- uses: codecov/codecov-action@v4
if: success()
with:
token: ${{secrets.CODECOV_TOKEN}} #required
file: ./coverage.xml #optional
env_vars: OS,PYTHON
fail_ci_if_error: true
warning_test:
env:
ENV_NAME: pyuvsim_tests_mpich
PYTHON: "3.11"
name: Warning Test
runs-on: ubuntu-latest
defaults:
run:
# Adding -l {0} helps ensure conda can be found properly.
shell: bash -l {0}
steps:
- uses: actions/checkout@main
with:
fetch-depth: 0
- name: Setup Miniforge
uses: conda-incubator/setup-miniconda@v3
with:
miniforge-version: latest
python-version: ${{ env.PYTHON }}
environment-file: ci/${{ env.ENV_NAME }}.yaml
activate-environment: ${{ env.ENV_NAME }}
- name: Conda Info
run: |
conda info -a
conda list
PYVER=`python -c "import sys; print('{:d}.{:d}'.format(sys.version_info.major, sys.version_info.minor))"`
if [[ $PYVER != ${{ env.PYTHON }} ]]; then
exit 1;
fi
- name: Install
run: |
pip install --no-deps .
- name: Run Tests
run: |
python -m pytest -n auto -W error --cov=pyuvsim --cov-config=.coveragerc --cov-report xml:./coverage.xml --junitxml=test-reports/xunit.xml
- name: Upload Coverage
uses: codecov/codecov-action@v4
if: success()
with:
token: ${{secrets.CODECOV_TOKEN}} #required
file: ./coverage.xml #optional
env_vars: OS,PYTHON
fail_ci_if_error: true