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While investigating biolink:causes for Unsecret Agent, I realized that edges without qualified predicates do not have a biolink predicate in their edge_id. For example:
{
"negated": "False",
"primary_knowledge_source": "infores:semmeddb",
"relation_label": "causes",
"subject": "UMLS:C1608383",
"source_predicate": "SEMMEDDB:causes",
"update_date": "2021-12-01 13:50:27",
"predicate": "biolink:causes",
"domain_range_exclusion": "False",
"publications_info": "{'PMID:34846163': {'object score': '888', 'publication date': '2021 Nov 30', 'sentence': 'Identifying the most-expressed var gene sequences in whole-blood clinical samples without the need for extensive processing or generating sample-specific reference genome data is critical for understanding the role of PfEMP1s in malaria pathogenesis.', 'subject score': '916'}}",
"predicate_label": "causes",
"id": "UMLS:C1608383---SEMMEDDB:causes---None---None---None---UMLS:C0024530---SEMMEDDB:",
"publications": [
"PMID:34846163"
],
"object": "UMLS:C0024530"
}
While investigating
biolink:causes
for Unsecret Agent, I realized that edges without qualified predicates do not have a biolink predicate in theiredge_id
. For example:In contrast:
@saramsey do you have any thoughts?
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