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Tracing via broad brush strokes around the boundary #51

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ok37 opened this issue May 18, 2020 · 1 comment
Open

Tracing via broad brush strokes around the boundary #51

ok37 opened this issue May 18, 2020 · 1 comment
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enhancement New feature or request experimental

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@ok37
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ok37 commented May 18, 2020

Option to trace by drawing the boundary pixels using a thick broad brush. The brush then draws an eroded edge along the boundary according to an intensity threshold or intensity gradient perhaps, while maintaining a 4 or 8 pixel neighbor with adjacent pixels. When edges are joined at the ends, the interior pixels are automatically filled in and assigned a cell index

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ok37 commented May 18, 2020

The motivation here is 1) edge pixels, where variance between tracers is highest, are drawn automatically making overall results more reproducible and 2) this would speed up tracing if drawing a cell from scratch, especially for large structures

@davidborland davidborland self-assigned this May 22, 2020
@davidborland davidborland added enhancement New feature or request experimental labels May 22, 2020
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