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Implementation of the skeletonisation of the prediction - to be used for centre line DSC #4411

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csudre opened this issue May 31, 2022 · 1 comment
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Feature request Module: metrics metric for model quality assessments WG: Evaluation For the evaluation working group

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@csudre
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csudre commented May 31, 2022

Is your feature request related to a problem? Please describe.
Need for a transform that calculates the skeleton / centre line of a binarised prediction. This is needed to be able to derive the centre line Dice score as evaluation metric

Describe the solution you'd like
Add a possible post processing transform of a binary input tensor and outputs the binary skeleton of this input (for both reference and prediction)
See skimage solution

@csudre csudre added Module: metrics metric for model quality assessments Feature request WG: Evaluation For the evaluation working group labels May 31, 2022
@vikashg
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vikashg commented Jan 5, 2024

quite narrow in scope. closing because of inactivity.

@vikashg vikashg closed this as completed Jan 5, 2024
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Labels
Feature request Module: metrics metric for model quality assessments WG: Evaluation For the evaluation working group
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